organic compounds
Antalarmin
aUniversity of Mississippi, Department of Medicinal Chemistry, University, MS 38677, USA, and bDepartment of Chemistry, Louisiana State University, Baton Rouge, LA 70803-1804, USA
*Correspondence e-mail: ffroncz@lsu.edu
In the molecule of the title compund [systematic name: N-butyl-N-ethyl-2,5,6-trimethyl-7-(2,4,6-trimethylphenyl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine], C24H34N4, the pyrrolopyrimidine ring system is nearly planar, its five- and six-membered rings forming a dihedral angle of 5.3 (2)°. The benzene ring is nearly orthogonal to the central ring system. The N atom carrying the ethyl and n-butyl groups is flattened pyramidal.
Related literature
For related literature, see: Allen (2002); Chorvat et al. (1999); Chu et al. (2007); Dieterich et al. (1997); Gross et al. (2005); Habib et al. (2000); Horn et al. (2008); Hsin et al. (2002); Banić Tomišić et al. (2001); Rivier & Vale (1983); Steckler & Holsboer (1999); Vale et al. (1981); Greiner et al. (2002).
Experimental
Crystal data
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Data collection: COLLECT (Nonius, 2000); cell HKL SCALEPACK (Otwinowski & Minor 1997); data reduction: HKL (Otwinowski & Minor 1997) DENZO and SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536808023775/pv2088sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808023775/pv2088Isup2.hkl
Synthesis of antalarmin has been reported (Greiner et al., 2002). It was crystallized from acetonitrile:water to afford translucent crystals: Mp = 85.9–86.1°C; HRMS m/z expected: 379.2862 found: 379.2878; CHN analysis for C24H34N4 expected: C 76.15, H 9.05, N 14.80%; found: C 76.07, H 8.69, N 14.90%.
H atoms on C were placed in idealized positions with C—H distances 0.95 - 0.99 Å and thereafter treated as riding. Uiso for H was assigned as 1.2 times Ueq of the attached atoms (1.5 for methyl). A torsional parameter was refined for each methyl group.
Data collection: COLLECT (Nonius, 2000); cell
HKL SCALEPACK (Otwinowski & Minor 1997); data reduction: HKL DENZO and SCALEPACK (Otwinowski & Minor 1997); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).C24H34N4 | Z = 2 |
Mr = 378.55 | F(000) = 412 |
Triclinic, P1 | Dx = 1.125 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 10.2656 (10) Å | Cell parameters from 7613 reflections |
b = 11.0655 (11) Å | θ = 2.5–34.3° |
c = 11.5029 (12) Å | µ = 0.07 mm−1 |
α = 63.646 (6)° | T = 150 K |
β = 85.669 (6)° | Fragment, colorless |
γ = 73.036 (5)° | 0.40 × 0.37 × 0.30 mm |
V = 1117.69 (19) Å3 |
Nonius KappaCCD diffractometer with Oxford Cryostream | 6916 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.023 |
Graphite monochromator | θmax = 34.3°, θmin = 2.6° |
ω and ϕ scans | h = −15→16 |
35420 measured reflections | k = −17→16 |
8550 independent reflections | l = −17→17 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.049 | H-atom parameters constrained |
wR(F2) = 0.142 | w = 1/[σ2(Fo2) + (0.0675P)2 + 0.2841P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max < 0.001 |
8550 reflections | Δρmax = 0.44 e Å−3 |
262 parameters | Δρmin = −0.24 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.016 (5) |
C24H34N4 | γ = 73.036 (5)° |
Mr = 378.55 | V = 1117.69 (19) Å3 |
Triclinic, P1 | Z = 2 |
a = 10.2656 (10) Å | Mo Kα radiation |
b = 11.0655 (11) Å | µ = 0.07 mm−1 |
c = 11.5029 (12) Å | T = 150 K |
α = 63.646 (6)° | 0.40 × 0.37 × 0.30 mm |
β = 85.669 (6)° |
Nonius KappaCCD diffractometer with Oxford Cryostream | 6916 reflections with I > 2σ(I) |
35420 measured reflections | Rint = 0.023 |
8550 independent reflections |
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.142 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.44 e Å−3 |
8550 reflections | Δρmin = −0.24 e Å−3 |
262 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.57024 (7) | 0.44531 (8) | 0.71728 (7) | 0.02058 (14) | |
N2 | 0.63299 (7) | 0.27413 (8) | 0.63295 (7) | 0.02111 (14) | |
N3 | 0.75731 (7) | 0.51591 (8) | 0.75233 (8) | 0.02095 (14) | |
N4 | 0.85651 (8) | 0.16323 (8) | 0.60760 (8) | 0.02270 (15) | |
C1 | 0.54248 (8) | 0.36459 (9) | 0.67003 (8) | 0.02038 (15) | |
C2 | 0.76639 (8) | 0.26219 (9) | 0.64044 (8) | 0.01867 (14) | |
C3 | 0.80944 (8) | 0.35136 (8) | 0.67783 (8) | 0.01795 (14) | |
C4 | 0.93184 (8) | 0.38865 (9) | 0.68326 (8) | 0.02052 (15) | |
C5 | 0.89619 (9) | 0.48788 (9) | 0.73001 (9) | 0.02223 (16) | |
C6 | 0.70349 (8) | 0.43622 (8) | 0.71773 (8) | 0.01811 (14) | |
C7 | 0.39518 (9) | 0.37212 (11) | 0.65875 (10) | 0.02787 (19) | |
H7A | 0.3624 | 0.4225 | 0.5670 | 0.042* | |
H7B | 0.3409 | 0.4223 | 0.7063 | 0.042* | |
H7C | 0.3861 | 0.2765 | 0.6957 | 0.042* | |
C8 | 1.06921 (9) | 0.34405 (11) | 0.63522 (10) | 0.02737 (18) | |
H8A | 1.1281 | 0.2617 | 0.7068 | 0.041* | |
H8B | 1.1107 | 0.4215 | 0.6026 | 0.041* | |
H8C | 1.0585 | 0.3198 | 0.5650 | 0.041* | |
C9 | 0.98058 (11) | 0.56497 (12) | 0.75378 (12) | 0.0329 (2) | |
H9A | 1.0761 | 0.5279 | 0.7389 | 0.049* | |
H9B | 0.9737 | 0.5521 | 0.8438 | 0.049* | |
H9C | 0.9474 | 0.6655 | 0.6943 | 0.049* | |
C10 | 0.67976 (9) | 0.61342 (9) | 0.79987 (9) | 0.02103 (16) | |
C11 | 0.66155 (10) | 0.56408 (10) | 0.93308 (9) | 0.02507 (17) | |
C12 | 0.57765 (11) | 0.65810 (12) | 0.97643 (10) | 0.0316 (2) | |
H12 | 0.5617 | 0.6257 | 1.0662 | 0.038* | |
C13 | 0.51689 (11) | 0.79804 (12) | 0.89118 (11) | 0.0324 (2) | |
C14 | 0.54134 (11) | 0.84480 (10) | 0.75999 (11) | 0.0306 (2) | |
H14 | 0.5027 | 0.9412 | 0.7019 | 0.037* | |
C15 | 0.62119 (10) | 0.75379 (10) | 0.71134 (9) | 0.02509 (17) | |
C16 | 0.73039 (13) | 0.41372 (12) | 1.02726 (11) | 0.0361 (2) | |
H16A | 0.8280 | 0.4010 | 1.0384 | 0.054* | |
H16B | 0.7184 | 0.3503 | 0.9933 | 0.054* | |
H16C | 0.6896 | 0.3920 | 1.1114 | 0.054* | |
C17 | 0.42260 (16) | 0.89708 (17) | 0.93916 (17) | 0.0527 (4) | |
H17A | 0.4363 | 0.8567 | 1.0339 | 0.079* | |
H17B | 0.3277 | 0.9109 | 0.9158 | 0.079* | |
H17C | 0.4426 | 0.9880 | 0.8989 | 0.079* | |
C18 | 0.63861 (13) | 0.80407 (12) | 0.56796 (10) | 0.0363 (2) | |
H18A | 0.6251 | 0.9060 | 0.5266 | 0.054* | |
H18B | 0.5713 | 0.7828 | 0.5297 | 0.054* | |
H18C | 0.7308 | 0.7562 | 0.5541 | 0.054* | |
C19 | 0.79893 (10) | 0.10010 (11) | 0.54297 (10) | 0.02763 (19) | |
H19A | 0.7231 | 0.0670 | 0.5926 | 0.033* | |
H19B | 0.8700 | 0.0172 | 0.5434 | 0.033* | |
C20 | 0.74631 (12) | 0.20307 (13) | 0.40350 (11) | 0.0331 (2) | |
H20A | 0.8205 | 0.2380 | 0.3545 | 0.050* | |
H20B | 0.6717 | 0.2824 | 0.4029 | 0.050* | |
H20C | 0.7129 | 0.1552 | 0.3633 | 0.050* | |
C21 | 0.97891 (9) | 0.06971 (10) | 0.69446 (10) | 0.02640 (18) | |
H21A | 1.0052 | 0.1202 | 0.7372 | 0.032* | |
H21B | 1.0547 | 0.0489 | 0.6413 | 0.032* | |
C22 | 0.96184 (11) | −0.06949 (10) | 0.79938 (11) | 0.0313 (2) | |
H22A | 0.9405 | −0.1225 | 0.7567 | 0.038* | |
H22B | 1.0496 | −0.1263 | 0.8512 | 0.038* | |
C23 | 0.85034 (12) | −0.05228 (12) | 0.89113 (11) | 0.0352 (2) | |
H23A | 0.8677 | 0.0063 | 0.9295 | 0.042* | |
H23B | 0.7610 | −0.0024 | 0.8409 | 0.042* | |
C24 | 0.84413 (15) | −0.19306 (14) | 0.99966 (13) | 0.0455 (3) | |
H24A | 0.9303 | −0.2401 | 1.0531 | 0.068* | |
H24B | 0.8293 | −0.2523 | 0.9621 | 0.068* | |
H24C | 0.7688 | −0.1775 | 1.0538 | 0.068* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0157 (3) | 0.0244 (3) | 0.0239 (3) | −0.0046 (2) | 0.0023 (2) | −0.0136 (3) |
N2 | 0.0178 (3) | 0.0246 (3) | 0.0247 (3) | −0.0066 (3) | 0.0031 (2) | −0.0142 (3) |
N3 | 0.0175 (3) | 0.0220 (3) | 0.0271 (4) | −0.0050 (2) | 0.0014 (2) | −0.0146 (3) |
N4 | 0.0213 (3) | 0.0227 (3) | 0.0268 (4) | −0.0027 (3) | 0.0018 (3) | −0.0155 (3) |
C1 | 0.0163 (3) | 0.0249 (4) | 0.0216 (4) | −0.0061 (3) | 0.0024 (3) | −0.0119 (3) |
C2 | 0.0179 (3) | 0.0192 (3) | 0.0189 (3) | −0.0038 (3) | 0.0021 (3) | −0.0096 (3) |
C3 | 0.0152 (3) | 0.0190 (3) | 0.0194 (3) | −0.0035 (2) | 0.0015 (2) | −0.0093 (3) |
C4 | 0.0151 (3) | 0.0226 (4) | 0.0234 (4) | −0.0045 (3) | 0.0017 (3) | −0.0105 (3) |
C5 | 0.0181 (3) | 0.0237 (4) | 0.0265 (4) | −0.0065 (3) | 0.0008 (3) | −0.0120 (3) |
C6 | 0.0164 (3) | 0.0189 (3) | 0.0198 (3) | −0.0040 (3) | 0.0013 (3) | −0.0099 (3) |
C7 | 0.0166 (4) | 0.0387 (5) | 0.0354 (5) | −0.0096 (3) | 0.0040 (3) | −0.0219 (4) |
C8 | 0.0163 (3) | 0.0323 (5) | 0.0346 (5) | −0.0069 (3) | 0.0055 (3) | −0.0165 (4) |
C9 | 0.0258 (4) | 0.0348 (5) | 0.0481 (6) | −0.0129 (4) | 0.0015 (4) | −0.0242 (5) |
C10 | 0.0205 (4) | 0.0219 (4) | 0.0240 (4) | −0.0047 (3) | 0.0012 (3) | −0.0139 (3) |
C11 | 0.0267 (4) | 0.0279 (4) | 0.0233 (4) | −0.0090 (3) | 0.0006 (3) | −0.0128 (3) |
C12 | 0.0343 (5) | 0.0409 (5) | 0.0287 (5) | −0.0131 (4) | 0.0069 (4) | −0.0227 (4) |
C13 | 0.0308 (5) | 0.0364 (5) | 0.0419 (6) | −0.0084 (4) | 0.0066 (4) | −0.0290 (5) |
C14 | 0.0317 (5) | 0.0232 (4) | 0.0380 (5) | −0.0020 (3) | 0.0000 (4) | −0.0180 (4) |
C15 | 0.0274 (4) | 0.0222 (4) | 0.0259 (4) | −0.0045 (3) | 0.0011 (3) | −0.0124 (3) |
C16 | 0.0404 (6) | 0.0331 (5) | 0.0269 (5) | −0.0091 (4) | −0.0038 (4) | −0.0064 (4) |
C17 | 0.0517 (8) | 0.0556 (8) | 0.0706 (10) | −0.0091 (6) | 0.0167 (7) | −0.0508 (8) |
C18 | 0.0464 (6) | 0.0290 (5) | 0.0254 (5) | −0.0040 (4) | 0.0022 (4) | −0.0094 (4) |
C19 | 0.0304 (4) | 0.0284 (4) | 0.0321 (5) | −0.0080 (3) | 0.0051 (4) | −0.0210 (4) |
C20 | 0.0340 (5) | 0.0419 (6) | 0.0310 (5) | −0.0103 (4) | 0.0019 (4) | −0.0230 (4) |
C21 | 0.0199 (4) | 0.0251 (4) | 0.0323 (5) | 0.0000 (3) | 0.0026 (3) | −0.0152 (4) |
C22 | 0.0313 (5) | 0.0232 (4) | 0.0346 (5) | 0.0010 (3) | 0.0004 (4) | −0.0138 (4) |
C23 | 0.0371 (5) | 0.0291 (5) | 0.0316 (5) | −0.0034 (4) | 0.0041 (4) | −0.0107 (4) |
C24 | 0.0464 (7) | 0.0379 (6) | 0.0376 (6) | −0.0104 (5) | 0.0024 (5) | −0.0050 (5) |
N1—C1 | 1.3332 (11) | C13—C14 | 1.3904 (16) |
N1—C6 | 1.3422 (11) | C13—C17 | 1.5100 (15) |
N2—C2 | 1.3425 (11) | C14—C15 | 1.3959 (13) |
N2—C1 | 1.3505 (11) | C14—H14 | 0.9500 |
N3—C6 | 1.3676 (11) | C15—C18 | 1.5035 (15) |
N3—C5 | 1.3972 (11) | C16—H16A | 0.9800 |
N3—C10 | 1.4331 (11) | C16—H16B | 0.9800 |
N4—C2 | 1.3860 (10) | C16—H16C | 0.9800 |
N4—C19 | 1.4692 (12) | C17—H17A | 0.9800 |
N4—C21 | 1.4700 (12) | C17—H17B | 0.9800 |
C1—C7 | 1.5023 (12) | C17—H17C | 0.9800 |
C2—C3 | 1.4190 (11) | C18—H18A | 0.9800 |
C3—C6 | 1.4095 (11) | C18—H18B | 0.9800 |
C3—C4 | 1.4458 (11) | C18—H18C | 0.9800 |
C4—C5 | 1.3743 (12) | C19—C20 | 1.5207 (16) |
C4—C8 | 1.5020 (12) | C19—H19A | 0.9900 |
C5—C9 | 1.4923 (13) | C19—H19B | 0.9900 |
C7—H7A | 0.9800 | C20—H20A | 0.9800 |
C7—H7B | 0.9800 | C20—H20B | 0.9800 |
C7—H7C | 0.9800 | C20—H20C | 0.9800 |
C8—H8A | 0.9800 | C21—C22 | 1.5280 (15) |
C8—H8B | 0.9800 | C21—H21A | 0.9900 |
C8—H8C | 0.9800 | C21—H21B | 0.9900 |
C9—H9A | 0.9800 | C22—C23 | 1.5261 (16) |
C9—H9B | 0.9800 | C22—H22A | 0.9900 |
C9—H9C | 0.9800 | C22—H22B | 0.9900 |
C10—C15 | 1.3980 (13) | C23—C24 | 1.5194 (17) |
C10—C11 | 1.3981 (13) | C23—H23A | 0.9900 |
C11—C12 | 1.3949 (14) | C23—H23B | 0.9900 |
C11—C16 | 1.5068 (15) | C24—H24A | 0.9800 |
C12—C13 | 1.3890 (17) | C24—H24B | 0.9800 |
C12—H12 | 0.9500 | C24—H24C | 0.9800 |
C1—N1—C6 | 112.50 (7) | C15—C14—H14 | 119.1 |
C2—N2—C1 | 119.06 (7) | C14—C15—C10 | 117.71 (9) |
C6—N3—C5 | 108.48 (7) | C14—C15—C18 | 120.94 (9) |
C6—N3—C10 | 124.21 (7) | C10—C15—C18 | 121.30 (8) |
C5—N3—C10 | 127.29 (7) | C11—C16—H16A | 109.5 |
C2—N4—C19 | 117.58 (7) | C11—C16—H16B | 109.5 |
C2—N4—C21 | 118.08 (7) | H16A—C16—H16B | 109.5 |
C19—N4—C21 | 115.32 (7) | C11—C16—H16C | 109.5 |
N1—C1—N2 | 127.02 (8) | H16A—C16—H16C | 109.5 |
N1—C1—C7 | 117.04 (8) | H16B—C16—H16C | 109.5 |
N2—C1—C7 | 115.94 (8) | C13—C17—H17A | 109.5 |
N2—C2—N4 | 117.28 (7) | C13—C17—H17B | 109.5 |
N2—C2—C3 | 119.88 (7) | H17A—C17—H17B | 109.5 |
N4—C2—C3 | 122.82 (7) | C13—C17—H17C | 109.5 |
C6—C3—C2 | 113.94 (7) | H17A—C17—H17C | 109.5 |
C6—C3—C4 | 106.79 (7) | H17B—C17—H17C | 109.5 |
C2—C3—C4 | 139.21 (8) | C15—C18—H18A | 109.5 |
C5—C4—C3 | 106.48 (7) | C15—C18—H18B | 109.5 |
C5—C4—C8 | 124.37 (8) | H18A—C18—H18B | 109.5 |
C3—C4—C8 | 128.84 (8) | C15—C18—H18C | 109.5 |
C4—C5—N3 | 109.62 (7) | H18A—C18—H18C | 109.5 |
C4—C5—C9 | 129.98 (8) | H18B—C18—H18C | 109.5 |
N3—C5—C9 | 120.38 (8) | N4—C19—C20 | 112.44 (8) |
N1—C6—N3 | 124.15 (7) | N4—C19—H19A | 109.1 |
N1—C6—C3 | 127.23 (7) | C20—C19—H19A | 109.1 |
N3—C6—C3 | 108.55 (7) | N4—C19—H19B | 109.1 |
C1—C7—H7A | 109.5 | C20—C19—H19B | 109.1 |
C1—C7—H7B | 109.5 | H19A—C19—H19B | 107.8 |
H7A—C7—H7B | 109.5 | C19—C20—H20A | 109.5 |
C1—C7—H7C | 109.5 | C19—C20—H20B | 109.5 |
H7A—C7—H7C | 109.5 | H20A—C20—H20B | 109.5 |
H7B—C7—H7C | 109.5 | C19—C20—H20C | 109.5 |
C4—C8—H8A | 109.5 | H20A—C20—H20C | 109.5 |
C4—C8—H8B | 109.5 | H20B—C20—H20C | 109.5 |
H8A—C8—H8B | 109.5 | N4—C21—C22 | 114.50 (8) |
C4—C8—H8C | 109.5 | N4—C21—H21A | 108.6 |
H8A—C8—H8C | 109.5 | C22—C21—H21A | 108.6 |
H8B—C8—H8C | 109.5 | N4—C21—H21B | 108.6 |
C5—C9—H9A | 109.5 | C22—C21—H21B | 108.6 |
C5—C9—H9B | 109.5 | H21A—C21—H21B | 107.6 |
H9A—C9—H9B | 109.5 | C23—C22—C21 | 113.98 (8) |
C5—C9—H9C | 109.5 | C23—C22—H22A | 108.8 |
H9A—C9—H9C | 109.5 | C21—C22—H22A | 108.8 |
H9B—C9—H9C | 109.5 | C23—C22—H22B | 108.8 |
C15—C10—C11 | 122.03 (8) | C21—C22—H22B | 108.8 |
C15—C10—N3 | 119.07 (8) | H22A—C22—H22B | 107.7 |
C11—C10—N3 | 118.86 (8) | C24—C23—C22 | 112.13 (10) |
C12—C11—C10 | 118.08 (9) | C24—C23—H23A | 109.2 |
C12—C11—C16 | 120.88 (9) | C22—C23—H23A | 109.2 |
C10—C11—C16 | 121.05 (9) | C24—C23—H23B | 109.2 |
C13—C12—C11 | 121.45 (10) | C22—C23—H23B | 109.2 |
C13—C12—H12 | 119.3 | H23A—C23—H23B | 107.9 |
C11—C12—H12 | 119.3 | C23—C24—H24A | 109.5 |
C12—C13—C14 | 118.91 (9) | C23—C24—H24B | 109.5 |
C12—C13—C17 | 120.70 (11) | H24A—C24—H24B | 109.5 |
C14—C13—C17 | 120.36 (11) | C23—C24—H24C | 109.5 |
C13—C14—C15 | 121.74 (9) | H24A—C24—H24C | 109.5 |
C13—C14—H14 | 119.1 | H24B—C24—H24C | 109.5 |
C6—N1—C1—N2 | 4.24 (13) | C10—N3—C6—C3 | −179.03 (8) |
C6—N1—C1—C7 | −177.02 (8) | C2—C3—C6—N1 | −3.57 (13) |
C2—N2—C1—N1 | −1.29 (14) | C4—C3—C6—N1 | 174.07 (8) |
C2—N2—C1—C7 | 179.97 (8) | C2—C3—C6—N3 | 179.42 (7) |
C1—N2—C2—N4 | 176.89 (8) | C4—C3—C6—N3 | −2.94 (9) |
C1—N2—C2—C3 | −4.58 (12) | C6—N3—C10—C15 | −90.87 (11) |
C19—N4—C2—N2 | 11.95 (12) | C5—N3—C10—C15 | 87.33 (11) |
C21—N4—C2—N2 | −133.70 (9) | C6—N3—C10—C11 | 87.18 (11) |
C19—N4—C2—C3 | −166.54 (8) | C5—N3—C10—C11 | −94.62 (11) |
C21—N4—C2—C3 | 47.81 (12) | C15—C10—C11—C12 | 2.55 (14) |
N2—C2—C3—C6 | 6.56 (12) | N3—C10—C11—C12 | −175.43 (8) |
N4—C2—C3—C6 | −174.99 (8) | C15—C10—C11—C16 | −177.49 (9) |
N2—C2—C3—C4 | −169.98 (10) | N3—C10—C11—C16 | 4.53 (13) |
N4—C2—C3—C4 | 8.47 (16) | C10—C11—C12—C13 | −2.01 (15) |
C6—C3—C4—C5 | 2.29 (9) | C16—C11—C12—C13 | 178.03 (10) |
C2—C3—C4—C5 | 178.98 (10) | C11—C12—C13—C14 | −0.34 (16) |
C6—C3—C4—C8 | −171.43 (9) | C11—C12—C13—C17 | 177.93 (11) |
C2—C3—C4—C8 | 5.26 (17) | C12—C13—C14—C15 | 2.29 (16) |
C3—C4—C5—N3 | −0.82 (10) | C17—C13—C14—C15 | −175.98 (11) |
C8—C4—C5—N3 | 173.25 (8) | C13—C14—C15—C10 | −1.77 (15) |
C3—C4—C5—C9 | −179.00 (10) | C13—C14—C15—C18 | 175.79 (11) |
C8—C4—C5—C9 | −4.92 (16) | C11—C10—C15—C14 | −0.71 (14) |
C6—N3—C5—C4 | −1.01 (10) | N3—C10—C15—C14 | 177.27 (8) |
C10—N3—C5—C4 | −179.44 (8) | C11—C10—C15—C18 | −178.26 (10) |
C6—N3—C5—C9 | 177.37 (9) | N3—C10—C15—C18 | −0.28 (14) |
C10—N3—C5—C9 | −1.06 (14) | C2—N4—C19—C20 | 71.72 (11) |
C1—N1—C6—N3 | 175.04 (8) | C21—N4—C19—C20 | −141.70 (9) |
C1—N1—C6—C3 | −1.54 (13) | C2—N4—C21—C22 | 91.90 (10) |
C5—N3—C6—N1 | −174.64 (8) | C19—N4—C21—C22 | −54.51 (11) |
C10—N3—C6—N1 | 3.84 (14) | N4—C21—C22—C23 | −60.09 (12) |
C5—N3—C6—C3 | 2.48 (10) | C21—C22—C23—C24 | −175.74 (10) |
Experimental details
Crystal data | |
Chemical formula | C24H34N4 |
Mr | 378.55 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 150 |
a, b, c (Å) | 10.2656 (10), 11.0655 (11), 11.5029 (12) |
α, β, γ (°) | 63.646 (6), 85.669 (6), 73.036 (5) |
V (Å3) | 1117.69 (19) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.07 |
Crystal size (mm) | 0.40 × 0.37 × 0.30 |
Data collection | |
Diffractometer | Nonius KappaCCD diffractometer with Oxford Cryostream |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 35420, 8550, 6916 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.793 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.142, 1.03 |
No. of reflections | 8550 |
No. of parameters | 262 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.44, −0.24 |
Computer programs: COLLECT (Nonius, 2000), HKL SCALEPACK (Otwinowski & Minor 1997), HKL DENZO and SCALEPACK (Otwinowski & Minor 1997), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997).
Acknowledgements
The purchase of the diffractometer was made possible by grant No. LEQSF (1999–2000)-ENH-TR-13, administered by the Louisiana Board of Regents.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Corticotropin releasing factor (CRF) is a 41 amino acid hormone that has been implicated in the stress response cascade (Vale et al.,1981). This action is achieved by the release of adrenocorticotropic hormone (ACTH) by stimulation of the hypothalamic-pituitary-adrenal (HPA) axis (Rivier & Vale, 1983). CRF creates this release by binding to G-protein coupled receptors designated as CRF1 and CRF2 (Steckler & Holsboer, 1999). The CRF1 receptor has been designated as the subtype responsible for the physiological reaction to stress (Dieterich et al., 1997). Both subtypes are found widely distributed in the central nervous system and have been correlated to numerous other responses (Hsin et al., 2002).
In the search for non-peptide, selective antagonists for CRF1, antalarmin (1) has emerged as a lead candidate. Analogs have been developed to increase activity and decrease LogP, yet none have been reported as superior in overall performance (Gross et al., 2005; Hsin et al., 2002; Chorvat et al., 1999). Antalarmin has shown anxiolytic activity in primates, as well as a reduction of self-administration of ethanol in addiction models (Habib et al., 2000; Chu et al., 2007). Recently, detailed toxicology has been reported indicating a favorable safety profile and suggesting that clinical trials may begin soon (Horn et al., 2008).
Data collection was initially attempted at 90 K, but an apparent phase change destroyed the crystal at that temperature. Thus, data were collected at 150 K, and the structure based upon those data is presented in Fig. 1. The pyrimidine and pyrrole rings are slightly nonplanar, exhibiting maximum deviations 0.036 (1) Å (for C2) and 0.016 (1) Å (for C6), respectively. These planes form a dihedral angle of 5.3 (2)°. The phenyl group is nearly orthogonal to the pyrrolopyrimidine ring system, forming dihedral angles of 88.52 (2)° with the pyrimidine and 86.40 (3)° with the pyrrole plane. N3 is trigonal planar, lying 0.011 (1) Å from the plane defined by the three C atoms bonded to it. Amine nitrogen N4 is flattened pyramidal, lying 0.252 (1) Å from the plane of C2, C19 and C21, with C–N–C angles in the range 115.32 (7)–118.08 (7)°. The n-butyl group is extended except for its attachment to N, with C19—N4—C21—C22 torsion angle -54.51 (11)°.
No other pyrrolopyrimidines having substituents at N4 are found in the Cambridge Structural Database (version 5.29, Nov. 2007; Allen, 2002). The structure of a similar molecule, ICAKOM, having a cyclopentyl group at N3 and a 4-phenoxyphenyl group at C4, has been reported Banić Tomišić et al. (2001).