organic compounds
1-[2-(2,6-Dichlorobenzyloxy)-2-(2-furyl)ethyl]-1H-benzimidazole
aDepartment of Chemistry, Zonguldak Karaelmas University, 67100 Zonguldak, Turkey, bDepartment of Chemistry, Southampton University, Southampton SO17 1BJ, England, and cDepartment of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
*Correspondence e-mail: merzifon@hacettepe.edu.tr
In the molecule of the title compound, C20H16Cl2N2O2, the planar benzimidazole ring system is oriented with respect to the furan and dichlorobenzene rings at dihedral angles of 53.39 (6) and 31.04 (5)°, respectively. In the intermolecular C—H⋯Cl hydrogen bonds link the molecules into centrosymmetric R22(8) dimers. These dimers are connected via a C—H⋯π contact between the benzimidazole and the furan rings, and π–π contacts between the benzimidazole and dichlorobenzene ring systems [centroid–centroid distances = 3.505 (1), 3.567 (1), 3.505 (1) and 3.567 (1) Å].
Related literature
For general background, see: Brammer & Feczko (1988); Özel Güven et al. (2007a,b). For related literature, see: Song & Shin (1998); Freer et al. (1986); Peeters et al. (1996); Peeters et al. (1979a,b); Caira et al. (2004). For ring motif details, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: COLLECT (Hooft, 1998); cell DENZO (Otwinowski & Minor, 1997) and COLLECT; data reduction: DENZO and COLLECT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S1600536808020758/si2098sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808020758/si2098Isup2.hkl
The title compound, was synthesized by the reaction of 2-(1H-benzimidazol -1-yl)-1-(furan-2-yl)ethanol (Özel Güven et al., 2007b) with NaH and appropriate benzyl halide. A solution of alcohol (150 mg, 0.657 mmol) in DMF (1.5 ml) was added to NaH (19.7 mg, 0.821 mmol) in small fractions. The appropriate benzyl halide (158 mg, 0.657 mmol) in DMF (0.8 ml) was then added dropwise. The mixture was stirred at room temperature for 2 h, and the excess hydride was decomposed with a small amount of methyl alcohol. After evaporation to dryness under reduced pressure, the crude residue was suspended with water and extracted with methylene chloride. The organic layer was dried over anhydrous sodium sulfate, and then evaporated to dryness. The crude residue was purified by
on a silica-gel column using chloroform-methanol as Crystals suitable for X-ray analysis were obtained by the recrystallization of the ether from a mixture of hexane/ethyl acetate (1:2) (yield; 124 mg, 49%).H atoms were located in difference syntheses and refined isotropically [C—H = 0.92 (2)–1.03 (2) Å; Uiso(H) = 0.015 (4)–0.037 (6) Å2].
Data collection: COLLECT (Hooft, 1998); cell
DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); data reduction: DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2003).C20H16Cl2N2O2 | F(000) = 1600 |
Mr = 387.25 | Dx = 1.413 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 4594 reflections |
a = 12.7720 (3) Å | θ = 2.9–27.5° |
b = 12.9761 (2) Å | µ = 0.37 mm−1 |
c = 21.9732 (5) Å | T = 120 K |
V = 3641.63 (13) Å3 | Block, colorless |
Z = 8 | 0.50 × 0.40 × 0.20 mm |
Bruker Nonius KappaCCD diffractometer | 4181 independent reflections |
Radiation source: fine-focus sealed tube | 3311 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.048 |
Detector resolution: 9.091 pixels mm-1 | θmax = 27.8°, θmin = 3.1° |
ϕ and ω scans | h = −13→16 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) | k = −14→16 |
Tmin = 0.835, Tmax = 0.929 | l = −28→22 |
27000 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | All H-atom parameters refined |
wR(F2) = 0.122 | w = 1/[σ2(Fo2) + (0.0688P)2 + 0.7891P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max < 0.001 |
4181 reflections | Δρmax = 0.50 e Å−3 |
300 parameters | Δρmin = −0.49 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0141 (10) |
C20H16Cl2N2O2 | V = 3641.63 (13) Å3 |
Mr = 387.25 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 12.7720 (3) Å | µ = 0.37 mm−1 |
b = 12.9761 (2) Å | T = 120 K |
c = 21.9732 (5) Å | 0.50 × 0.40 × 0.20 mm |
Bruker Nonius KappaCCD diffractometer | 4181 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) | 3311 reflections with I > 2σ(I) |
Tmin = 0.835, Tmax = 0.929 | Rint = 0.048 |
27000 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.122 | All H-atom parameters refined |
S = 1.10 | Δρmax = 0.50 e Å−3 |
4181 reflections | Δρmin = −0.49 e Å−3 |
300 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.52705 (4) | 0.15868 (4) | 0.27568 (2) | 0.03062 (16) | |
Cl2 | 0.46363 (3) | 0.33374 (4) | 0.49707 (2) | 0.02746 (16) | |
O1 | 0.44665 (9) | −0.10157 (10) | 0.42074 (6) | 0.0231 (3) | |
O2 | 0.36998 (8) | 0.13809 (9) | 0.42664 (5) | 0.0192 (3) | |
N1 | 0.24117 (10) | 0.14633 (11) | 0.53080 (7) | 0.0183 (3) | |
N2 | 0.22763 (11) | 0.31228 (12) | 0.56340 (7) | 0.0216 (3) | |
C1 | 0.21768 (13) | 0.24739 (13) | 0.51763 (9) | 0.0205 (4) | |
H1 | 0.1946 (14) | 0.2656 (15) | 0.4777 (9) | 0.018 (5)* | |
C2 | 0.26218 (12) | 0.24900 (13) | 0.61103 (8) | 0.0186 (4) | |
C3 | 0.28517 (13) | 0.27431 (15) | 0.67109 (9) | 0.0241 (4) | |
H3 | 0.2801 (14) | 0.3425 (15) | 0.6832 (9) | 0.018 (5)* | |
C4 | 0.31590 (13) | 0.19444 (16) | 0.70928 (10) | 0.0270 (4) | |
H4 | 0.3323 (15) | 0.2095 (16) | 0.7491 (10) | 0.026 (5)* | |
C5 | 0.32404 (14) | 0.09079 (16) | 0.68881 (9) | 0.0269 (4) | |
H5 | 0.3477 (15) | 0.0361 (15) | 0.7160 (9) | 0.026 (5)* | |
C6 | 0.30207 (13) | 0.06387 (14) | 0.62937 (9) | 0.0223 (4) | |
H6 | 0.3068 (15) | −0.0068 (17) | 0.6154 (9) | 0.028 (5)* | |
C7 | 0.27122 (12) | 0.14474 (13) | 0.59120 (8) | 0.0186 (4) | |
C8 | 0.24218 (13) | 0.05901 (14) | 0.48853 (9) | 0.0198 (4) | |
H81 | 0.1896 (15) | 0.0733 (16) | 0.4578 (9) | 0.026 (5)* | |
H82 | 0.2223 (14) | −0.0048 (16) | 0.5104 (8) | 0.020 (5)* | |
C9 | 0.34849 (12) | 0.04456 (13) | 0.46028 (8) | 0.0178 (4) | |
H9 | 0.3996 (14) | 0.0367 (14) | 0.4940 (8) | 0.015 (4)* | |
C10 | 0.35358 (12) | −0.05012 (13) | 0.42090 (8) | 0.0190 (4) | |
C11 | 0.28836 (14) | −0.09792 (15) | 0.38168 (9) | 0.0249 (4) | |
H11 | 0.2189 (17) | −0.0773 (17) | 0.3727 (10) | 0.035 (6)* | |
C12 | 0.34340 (15) | −0.18372 (15) | 0.35581 (9) | 0.0266 (4) | |
H12 | 0.3178 (16) | −0.2308 (17) | 0.3271 (10) | 0.031 (6)* | |
C13 | 0.43807 (15) | −0.18196 (15) | 0.38007 (9) | 0.0252 (4) | |
H13 | 0.4966 (17) | −0.2303 (18) | 0.3736 (9) | 0.032 (6)* | |
C14 | 0.47740 (13) | 0.14762 (14) | 0.41337 (9) | 0.0206 (4) | |
H141 | 0.5151 (15) | 0.1398 (14) | 0.4508 (10) | 0.019 (5)* | |
H142 | 0.4958 (16) | 0.0907 (17) | 0.3863 (10) | 0.030 (5)* | |
C15 | 0.49591 (12) | 0.25242 (13) | 0.38536 (8) | 0.0177 (4) | |
C16 | 0.51955 (13) | 0.26642 (14) | 0.32382 (8) | 0.0204 (4) | |
C17 | 0.53897 (13) | 0.36388 (15) | 0.29854 (9) | 0.0243 (4) | |
H17 | 0.5544 (16) | 0.3651 (17) | 0.2524 (11) | 0.037 (6)* | |
C18 | 0.53539 (14) | 0.45094 (15) | 0.33540 (10) | 0.0263 (4) | |
H18 | 0.5515 (16) | 0.5199 (17) | 0.3202 (10) | 0.031 (6)* | |
C19 | 0.51163 (13) | 0.44195 (14) | 0.39651 (9) | 0.0232 (4) | |
H19 | 0.5110 (15) | 0.5037 (16) | 0.4233 (9) | 0.025 (5)* | |
C20 | 0.49238 (13) | 0.34367 (14) | 0.42002 (8) | 0.0190 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0346 (3) | 0.0290 (3) | 0.0282 (3) | 0.00275 (18) | −0.0013 (2) | −0.0095 (2) |
Cl2 | 0.0261 (2) | 0.0342 (3) | 0.0221 (3) | −0.00255 (17) | 0.00426 (17) | −0.00402 (19) |
O1 | 0.0216 (6) | 0.0225 (7) | 0.0253 (7) | 0.0020 (5) | 0.0008 (5) | −0.0037 (5) |
O2 | 0.0150 (5) | 0.0167 (6) | 0.0258 (7) | −0.0010 (4) | 0.0025 (5) | 0.0039 (5) |
N1 | 0.0166 (7) | 0.0175 (8) | 0.0208 (8) | 0.0010 (5) | 0.0026 (6) | 0.0011 (6) |
N2 | 0.0190 (7) | 0.0190 (8) | 0.0268 (9) | 0.0019 (6) | 0.0037 (6) | 0.0013 (6) |
C1 | 0.0179 (8) | 0.0191 (9) | 0.0246 (10) | 0.0015 (7) | 0.0028 (7) | 0.0036 (8) |
C2 | 0.0132 (7) | 0.0181 (9) | 0.0246 (10) | 0.0007 (6) | 0.0035 (7) | −0.0012 (7) |
C3 | 0.0175 (8) | 0.0240 (10) | 0.0308 (11) | 0.0001 (7) | 0.0023 (7) | −0.0072 (8) |
C4 | 0.0187 (8) | 0.0375 (11) | 0.0249 (11) | 0.0014 (7) | −0.0022 (7) | −0.0044 (9) |
C5 | 0.0209 (8) | 0.0288 (10) | 0.0309 (11) | 0.0035 (7) | −0.0013 (8) | 0.0042 (9) |
C6 | 0.0189 (8) | 0.0202 (9) | 0.0279 (10) | 0.0018 (7) | 0.0008 (7) | 0.0019 (8) |
C7 | 0.0125 (7) | 0.0208 (9) | 0.0224 (9) | 0.0002 (6) | 0.0021 (7) | −0.0005 (7) |
C8 | 0.0180 (8) | 0.0184 (9) | 0.0228 (10) | −0.0029 (6) | 0.0009 (7) | −0.0012 (7) |
C9 | 0.0175 (8) | 0.0162 (8) | 0.0198 (9) | −0.0010 (6) | −0.0004 (7) | 0.0017 (7) |
C10 | 0.0189 (8) | 0.0187 (9) | 0.0194 (9) | 0.0001 (6) | 0.0034 (7) | 0.0029 (7) |
C11 | 0.0235 (9) | 0.0273 (10) | 0.0240 (10) | −0.0006 (7) | −0.0010 (7) | −0.0003 (8) |
C12 | 0.0321 (10) | 0.0253 (10) | 0.0224 (10) | −0.0033 (8) | 0.0019 (8) | −0.0047 (8) |
C13 | 0.0304 (9) | 0.0216 (9) | 0.0235 (10) | 0.0019 (7) | 0.0060 (8) | −0.0044 (8) |
C14 | 0.0154 (8) | 0.0179 (9) | 0.0285 (11) | −0.0003 (6) | 0.0027 (7) | 0.0026 (8) |
C15 | 0.0118 (7) | 0.0182 (9) | 0.0233 (9) | 0.0002 (6) | 0.0006 (7) | 0.0012 (7) |
C16 | 0.0166 (8) | 0.0214 (9) | 0.0232 (10) | 0.0002 (6) | −0.0015 (7) | −0.0027 (7) |
C17 | 0.0214 (9) | 0.0286 (10) | 0.0229 (11) | −0.0012 (7) | −0.0019 (7) | 0.0061 (8) |
C18 | 0.0243 (9) | 0.0203 (10) | 0.0344 (11) | −0.0028 (7) | −0.0040 (8) | 0.0076 (8) |
C19 | 0.0198 (8) | 0.0188 (9) | 0.0311 (11) | −0.0009 (7) | −0.0033 (7) | −0.0026 (8) |
C20 | 0.0144 (7) | 0.0225 (9) | 0.0200 (9) | 0.0006 (6) | −0.0009 (7) | −0.0012 (7) |
Cl1—C16 | 1.7557 (19) | C8—H82 | 0.99 (2) |
Cl2—C20 | 1.7373 (19) | C9—C8 | 1.505 (2) |
O1—C10 | 1.363 (2) | C9—C10 | 1.504 (2) |
O1—C13 | 1.378 (2) | C9—H9 | 0.992 (18) |
O2—C9 | 1.4474 (19) | C10—C11 | 1.350 (2) |
O2—C14 | 1.4081 (19) | C11—C12 | 1.434 (3) |
N1—C1 | 1.376 (2) | C11—H11 | 0.95 (2) |
N1—C7 | 1.382 (2) | C12—H12 | 0.94 (2) |
N1—C8 | 1.465 (2) | C13—C12 | 1.322 (3) |
N2—C1 | 1.318 (2) | C13—H13 | 0.99 (2) |
C1—H1 | 0.95 (2) | C14—H141 | 0.96 (2) |
C2—N2 | 1.401 (2) | C14—H142 | 0.98 (2) |
C2—C3 | 1.391 (3) | C15—C14 | 1.511 (2) |
C2—C7 | 1.426 (2) | C15—C16 | 1.397 (3) |
C3—H3 | 0.926 (19) | C15—C20 | 1.409 (2) |
C4—C3 | 1.390 (3) | C17—C16 | 1.403 (3) |
C4—C5 | 1.422 (3) | C17—C18 | 1.391 (3) |
C4—H4 | 0.92 (2) | C17—H17 | 1.03 (2) |
C5—H5 | 0.98 (2) | C18—H18 | 0.98 (2) |
C6—C5 | 1.381 (3) | C19—C18 | 1.382 (3) |
C6—C7 | 1.400 (2) | C19—H19 | 0.99 (2) |
C6—H6 | 0.97 (2) | C20—C19 | 1.398 (2) |
C8—H81 | 0.97 (2) | ||
C10—O1—C13 | 107.64 (14) | C10—C9—H9 | 108.5 (10) |
C14—O2—C9 | 111.36 (12) | O1—C10—C9 | 116.05 (14) |
C1—N1—C7 | 106.07 (15) | C11—C10—O1 | 108.15 (15) |
C1—N1—C8 | 127.26 (16) | C11—C10—C9 | 135.73 (15) |
C7—N1—C8 | 126.52 (15) | C10—C11—C12 | 107.90 (16) |
C1—N2—C2 | 103.05 (15) | C10—C11—H11 | 125.6 (14) |
N1—C1—H1 | 119.8 (12) | C12—C11—H11 | 126.5 (14) |
N2—C1—N1 | 115.30 (17) | C11—C12—H12 | 127.0 (13) |
N2—C1—H1 | 124.9 (12) | C13—C12—C11 | 105.97 (18) |
N2—C2—C7 | 110.68 (15) | C13—C12—H12 | 127.0 (13) |
C3—C2—N2 | 129.52 (17) | O1—C13—H13 | 121.0 (12) |
C3—C2—C7 | 119.78 (16) | C12—C13—O1 | 110.33 (17) |
C4—C3—C2 | 117.14 (18) | C12—C13—H13 | 128.6 (12) |
C4—C3—H3 | 123.9 (12) | O2—C14—C15 | 108.41 (13) |
C2—C3—H3 | 118.9 (12) | O2—C14—H141 | 107.6 (12) |
C3—C4—C5 | 122.33 (19) | O2—C14—H142 | 107.1 (12) |
C3—C4—H4 | 118.7 (13) | C15—C14—H141 | 111.5 (12) |
C5—C4—H4 | 119.0 (13) | C15—C14—H142 | 113.3 (13) |
C4—C5—H5 | 121.1 (12) | H141—C14—H142 | 108.7 (17) |
C6—C5—C4 | 121.58 (18) | C16—C15—C20 | 114.88 (15) |
C6—C5—H5 | 117.3 (12) | C16—C15—C14 | 123.02 (16) |
C5—C6—C7 | 115.74 (17) | C20—C15—C14 | 122.09 (16) |
C5—C6—H6 | 121.8 (12) | C15—C16—C17 | 122.57 (16) |
C7—C6—H6 | 122.5 (12) | C15—C16—Cl1 | 119.42 (13) |
N1—C7—C6 | 131.67 (17) | C17—C16—Cl1 | 118.00 (14) |
N1—C7—C2 | 104.89 (14) | C16—C17—H17 | 115.9 (12) |
C6—C7—C2 | 123.42 (17) | C18—C17—C16 | 119.71 (18) |
N1—C8—C9 | 111.46 (14) | C18—C17—H17 | 124.4 (12) |
N1—C8—H81 | 106.7 (12) | C17—C18—H18 | 122.6 (13) |
N1—C8—H82 | 109.6 (11) | C19—C18—C17 | 120.31 (18) |
C9—C8—H81 | 111.2 (12) | C19—C18—H18 | 117.1 (13) |
C9—C8—H82 | 109.1 (11) | C18—C19—C20 | 118.35 (18) |
H81—C8—H82 | 108.7 (16) | C18—C19—H19 | 120.6 (12) |
O2—C9—C10 | 112.52 (14) | C20—C19—H19 | 121.0 (12) |
O2—C9—C8 | 106.10 (13) | C15—C20—Cl2 | 118.12 (13) |
O2—C9—H9 | 110.0 (10) | C19—C20—C15 | 124.17 (17) |
C8—C9—H9 | 107.4 (10) | C19—C20—Cl2 | 117.71 (14) |
C10—C9—C8 | 112.22 (14) | ||
C13—O1—C10—C11 | 0.53 (19) | C5—C6—C7—C2 | −0.1 (2) |
C13—O1—C10—C9 | −176.90 (14) | O2—C9—C8—N1 | −61.67 (18) |
C10—O1—C13—C12 | −1.1 (2) | O2—C9—C10—C11 | −81.3 (2) |
C14—O2—C9—C10 | −74.57 (17) | O2—C9—C10—O1 | 95.24 (17) |
C14—O2—C9—C8 | 162.36 (15) | C8—C9—C10—C11 | 38.3 (3) |
C9—O2—C14—C15 | −173.07 (14) | C8—C9—C10—O1 | −145.19 (15) |
C7—N1—C1—N2 | −0.99 (19) | C10—C9—C8—N1 | 175.07 (14) |
C8—N1—C1—N2 | −176.72 (15) | O1—C10—C11—C12 | 0.1 (2) |
C1—N1—C7—C2 | 0.65 (16) | C9—C10—C11—C12 | 176.83 (18) |
C1—N1—C7—C6 | 178.95 (17) | C10—C11—C12—C13 | −0.8 (2) |
C8—N1—C7—C2 | 176.41 (14) | O1—C13—C12—C11 | 1.1 (2) |
C8—N1—C7—C6 | −5.3 (3) | C16—C15—C14—O2 | −108.33 (18) |
C1—N1—C8—C9 | 90.6 (2) | C20—C15—C14—O2 | 72.8 (2) |
C7—N1—C8—C9 | −84.3 (2) | C14—C15—C16—Cl1 | 0.8 (2) |
C2—N2—C1—N1 | 0.85 (18) | C14—C15—C16—C17 | −178.50 (15) |
C3—C2—N2—C1 | −179.27 (17) | C20—C15—C16—Cl1 | 179.66 (11) |
C7—C2—N2—C1 | −0.38 (17) | C20—C15—C16—C17 | 0.4 (2) |
N2—C2—C3—C4 | 178.50 (16) | C14—C15—C20—Cl2 | −1.0 (2) |
C7—C2—C3—C4 | −0.3 (2) | C14—C15—C20—C19 | 178.26 (15) |
N2—C2—C7—N1 | −0.18 (17) | C16—C15—C20—Cl2 | −179.96 (12) |
N2—C2—C7—C6 | −178.66 (15) | C16—C15—C20—C19 | −0.7 (2) |
C3—C2—C7—N1 | 178.83 (14) | C18—C17—C16—Cl1 | −178.99 (13) |
C3—C2—C7—C6 | 0.3 (2) | C18—C17—C16—C15 | 0.3 (3) |
C5—C4—C3—C2 | 0.0 (3) | C16—C17—C18—C19 | −0.8 (3) |
C3—C4—C5—C6 | 0.3 (3) | C20—C19—C18—C17 | 0.5 (3) |
C7—C6—C5—C4 | −0.2 (2) | Cl2—C20—C19—C18 | 179.51 (13) |
C5—C6—C7—N1 | −178.12 (16) | C15—C20—C19—C18 | 0.2 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19···Cl2i | 1.00 (2) | 2.76 (2) | 3.7470 (19) | 172.0 (15) |
C1—H1···Cg1ii | 0.95 (2) | 2.533 (19) | 3.441 (2) | 158.8 (16) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, y−1/2, z. |
Experimental details
Crystal data | |
Chemical formula | C20H16Cl2N2O2 |
Mr | 387.25 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 120 |
a, b, c (Å) | 12.7720 (3), 12.9761 (2), 21.9732 (5) |
V (Å3) | 3641.63 (13) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.37 |
Crystal size (mm) | 0.50 × 0.40 × 0.20 |
Data collection | |
Diffractometer | Bruker Nonius KappaCCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2007) |
Tmin, Tmax | 0.835, 0.929 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27000, 4181, 3311 |
Rint | 0.048 |
(sin θ/λ)max (Å−1) | 0.657 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.122, 1.10 |
No. of reflections | 4181 |
No. of parameters | 300 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.50, −0.49 |
Computer programs: , DENZO (Otwinowski & Minor, 1997) and COLLECT (Hooft, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003), WinGX (Farrugia, 1999) and PLATON (Spek, 2003).
C14—O2—C9 | 111.36 (12) | N1—C8—C9 | 111.46 (14) |
N2—C1—N1 | 115.30 (17) | O2—C9—C10 | 112.52 (14) |
N2—C2—C7 | 110.68 (15) | O2—C9—C8 | 106.10 (13) |
C5—C6—C7 | 115.74 (17) | C10—C9—C8 | 112.22 (14) |
C6—C7—C2 | 123.42 (17) | O2—C14—C15 | 108.41 (13) |
D—H···A | D—H | H···A | D···A | D—H···A |
C19—H19···Cl2i | 1.00 (2) | 2.76 (2) | 3.7470 (19) | 172.0 (15) |
C1—H1···Cg1ii | 0.95 (2) | 2.533 (19) | 3.441 (2) | 158.8 (16) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1/2, y−1/2, z. |
Acknowledgements
The authors acknowledge the Zonguldak Karaelmas University Research Fund (grant No. 2004-13-02-16).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In recent years, there has been increasing interest in synthesis of heterocyclic compounds having biological and commercial importances. Clotrimazole (Song & Shin, 1998), econazole (Freer et al., 1986), ketoconazole (Peeters et al., 1979a) and miconazole (Peeters et al., 1979b) are well-known imidazole ring containing, while itraconazole (Peeters et al., 1996) and fluconazole (Caira et al., 2004) are 1H-1,2,4-triazole ring containing, azole derivatives. They have been developed for clinical uses as antifungal agents (Brammer & Feczko, 1988). Lately, similar structures to miconazole and econazole have been reported to show antibacterial activity more than antifungal activity (Özel Güven et al., 2007a,b). In these structures, benzimidazole ring has been found in place of the imidazole ring of miconazole and econazole. We report herein the crystal structure of title benzimidazole derivative.
In the molecule of the title compound (Fig. 1) the bond lengths and angles are generally within normal ranges. The planar benzimidazole ring system is oriented with respect to the furan and dichlorobenzene rings at dihedral angles of 53.39 (6)° and 31.04 (5)°, respectively. Atoms C8, C9 and C14 are 0.063 (2), 0.065 (2) and -0.039 (2) Å away from the ring planes of benzimidazole, furan and dichlorobenzene, respectively. So, they are coplanar with the adjacent rings. The N1-C8-C9, C9-O2-C14 and C8-C9-C10, O2-C9-C10 bond angles are nearly equal, while O2-C9-C8 and O2-C14-C15 bond angles are different from each other. The N1-C1-N2, N2-C2-C7 and C2-C7-C6 bond angles are enlarged, while C5-C6-C7 bond angle is narrowed. In dichlorobenzene ring, the C15-C16-C17 and C15-C20-C19 bond angles are enlarged, while C16-C15-C20 bond angle is highly narrowed (Table 1), probably due to the intermolecular C-H···Cl hydrogen bonds (Table 2).
In the crystal structure, intermolecular weak C-H···Cl hydrogen bonds (Table 2) link the molecules to form a R22(8) ring motif (Fig. 2) (Bernstein et al., 1995), in which they may be effective in the stabilization of the structure. The C—H···π contact (Table 2) between the benzimidazole and the furan rings and π—π contacts between the benzimidazole and dichlorobenzene ring systems Cg2···Cg4i, Cg3···Cg4i, Cg4···Cg2ii and Cg4···Cg3ii [symmetry codes: (i) -1/2 + x, 1/2 - y, 1 - z; (ii) 1/2 + x, 1/2 - y, 1 - z, where Cg2, Cg3 and Cg4 are centroids of the rings (N1/N2/C1/C2/C7), (C2-C7) and (C15-C20), respectively] further stabilize the structure, with centroid–centroid distances of 3.505 (1), 3.567 (1), 3.505 (1) and 3.567 (1) Å, respectively.