organic compounds
3-Ethyl-4-[(E)-2-methylbenzylideneamino]-1H-1,2,4-triazole-5(4H)-thione
aCollege of Chemical Engineering and Materials Science, Zhejiang University of Technology, People's Republic of China
*Correspondence e-mail: shanshang@mail.hz.zj.cn
Crystals of the title compound, C12H14N4S, were obtained from a condensation reaction of 4-amino-3-ethyl-1H-1,2,4-triazole-5(4H)-thione and 2-methylbenzaldehyde. In the molecular structure, there is a short N=C double bond [1.255 (2) Å], and the benzene and triazole rings are located on opposite sites of this double bond. The two rings are approximately parallel to each other, the dihedral angle being 1.75 (11)°. A partially overlapped arrangement is observed between the nearly parallel triazole and benzene rings of adjacent molecules; the perpendicular distance of the centroid of the triazole ring from the benzene ring is 3.482 Å, indicating the existence of π–π stacking in the crystal structure.
Related literature
For general background, see: Okabe et al. (1993); Shan et al. (2003). For related structures, see: Fan et al. (2008); Shan et al. (2004, 2008). For the thickness of the aromatic ring, see: Cotton & Wilkinson (1972).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: PROCESS-AUTO (Rigaku, 1998); cell PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808019867/xu2434sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808019867/xu2434Isup2.hkl
4-Amino-3-ethyl-1H-1,2,4-triazole-5(4H)-thione (0.29 g, 2 mmol) was dissolved in ethanol (25 ml), then acetic acid (1 ml) was added slowly to the ethanol solution with stirring. The solution was heated at 333 K for several minutes until the solution cleared. 2-Methylbenzaldehyde (0.24 g, 2 mmol) was then dropped slowly into the solution, and the mixture was refluxed for 5 h. After the solution had cooled to room temperature yellow powder crystals appeared. The powder crystals were separated and washed with water three times. Single crystals of the title compound were obtained by recrystallization from an absolute ethanol solution.
H atom bonded to N atom was located in a difference Fourier map and refined as riding in its as-found relative position with Uiso(H) = 1.5Ueq(N). Methyl H atoms were placed in calculated positions with C—H = 0.96 Å and the torsion angles were refined to fit the electron density, Uiso(H) = 1.5Ueq(C). Other H atoms were placed in calculated positions with C—H = 0.93 (aromatic) and 0.97 Å (methylene), and refined in riding mode with Uiso(H) = 1.2Ueq(C).
Data collection: PROCESS-AUTO (Rigaku, 1998); cell
PROCESS-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).C12H14N4S | F(000) = 520 |
Mr = 246.33 | Dx = 1.310 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 4278 reflections |
a = 7.7255 (15) Å | θ = 2.8–24.5° |
b = 15.411 (3) Å | µ = 0.24 mm−1 |
c = 10.685 (2) Å | T = 295 K |
β = 101.032 (12)° | Prism, yellow |
V = 1248.7 (4) Å3 | 0.32 × 0.28 × 0.24 mm |
Z = 4 |
Rigaku R-AXIS RAPID IP diffractometer | 1777 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.061 |
Graphite monochromator | θmax = 27.6°, θmin = 2.6° |
Detector resolution: 10.00 pixels mm-1 | h = −9→10 |
ω scans | k = −20→16 |
12354 measured reflections | l = −13→13 |
2860 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.121 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0463P)2 + 0.2633P] where P = (Fo2 + 2Fc2)/3 |
2860 reflections | (Δ/σ)max < 0.001 |
156 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C12H14N4S | V = 1248.7 (4) Å3 |
Mr = 246.33 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.7255 (15) Å | µ = 0.24 mm−1 |
b = 15.411 (3) Å | T = 295 K |
c = 10.685 (2) Å | 0.32 × 0.28 × 0.24 mm |
β = 101.032 (12)° |
Rigaku R-AXIS RAPID IP diffractometer | 1777 reflections with I > 2σ(I) |
12354 measured reflections | Rint = 0.061 |
2860 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.121 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.18 e Å−3 |
2860 reflections | Δρmin = −0.21 e Å−3 |
156 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S | 0.70986 (7) | −0.00644 (3) | 0.39484 (6) | 0.0542 (2) | |
N1 | 0.9437 (2) | 0.12184 (11) | 0.47565 (18) | 0.0453 (5) | |
H1N | 1.0320 | 0.0826 | 0.5095 | 0.068* | |
N2 | 0.9697 (2) | 0.20996 (11) | 0.47450 (18) | 0.0449 (5) | |
N3 | 0.70093 (19) | 0.17368 (10) | 0.37970 (15) | 0.0356 (4) | |
N4 | 0.5343 (2) | 0.19429 (11) | 0.31007 (17) | 0.0424 (5) | |
C1 | 0.7829 (3) | 0.09601 (13) | 0.4175 (2) | 0.0388 (5) | |
C2 | 0.8200 (3) | 0.24045 (13) | 0.4152 (2) | 0.0387 (5) | |
C3 | 0.7750 (3) | 0.33278 (13) | 0.3886 (2) | 0.0486 (6) | |
H3A | 0.6760 | 0.3482 | 0.4279 | 0.058* | |
H3B | 0.7391 | 0.3408 | 0.2973 | 0.058* | |
C4 | 0.9288 (3) | 0.39305 (14) | 0.4383 (3) | 0.0627 (7) | |
H4A | 0.9624 | 0.3868 | 0.5291 | 0.094* | |
H4B | 0.8942 | 0.4520 | 0.4180 | 0.094* | |
H4C | 1.0270 | 0.3784 | 0.3991 | 0.094* | |
C5 | 0.4118 (3) | 0.13985 (14) | 0.3022 (2) | 0.0443 (6) | |
H5 | 0.4330 | 0.0856 | 0.3402 | 0.053* | |
C6 | 0.2346 (3) | 0.16241 (14) | 0.2325 (2) | 0.0412 (5) | |
C7 | 0.1079 (3) | 0.09783 (15) | 0.1958 (2) | 0.0484 (6) | |
C8 | −0.0589 (3) | 0.1238 (2) | 0.1313 (2) | 0.0631 (7) | |
H8 | −0.1454 | 0.0820 | 0.1064 | 0.076* | |
C9 | −0.0980 (3) | 0.2091 (2) | 0.1040 (3) | 0.0688 (8) | |
H9 | −0.2105 | 0.2245 | 0.0618 | 0.083* | |
C10 | 0.0279 (3) | 0.27235 (18) | 0.1386 (2) | 0.0621 (7) | |
H10 | 0.0019 | 0.3302 | 0.1182 | 0.074* | |
C11 | 0.1935 (3) | 0.24901 (15) | 0.2038 (2) | 0.0502 (6) | |
H11 | 0.2783 | 0.2916 | 0.2288 | 0.060* | |
C12 | 0.1452 (3) | 0.00349 (16) | 0.2212 (3) | 0.0700 (8) | |
H12A | 0.2246 | −0.0169 | 0.1687 | 0.105* | |
H12B | 0.0369 | −0.0287 | 0.2019 | 0.105* | |
H12C | 0.1978 | −0.0045 | 0.3094 | 0.105* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S | 0.0374 (3) | 0.0352 (3) | 0.0829 (5) | −0.0002 (2) | −0.0066 (3) | −0.0011 (3) |
N1 | 0.0309 (9) | 0.0361 (9) | 0.0641 (12) | 0.0015 (7) | −0.0027 (8) | 0.0017 (9) |
N2 | 0.0339 (9) | 0.0374 (10) | 0.0598 (12) | −0.0031 (7) | −0.0003 (8) | 0.0001 (9) |
N3 | 0.0273 (8) | 0.0326 (8) | 0.0443 (10) | 0.0001 (7) | 0.0000 (7) | 0.0000 (7) |
N4 | 0.0305 (9) | 0.0416 (10) | 0.0507 (11) | 0.0016 (8) | −0.0031 (8) | 0.0013 (8) |
C1 | 0.0304 (10) | 0.0400 (11) | 0.0444 (12) | 0.0025 (8) | 0.0028 (9) | 0.0000 (9) |
C2 | 0.0333 (11) | 0.0368 (11) | 0.0449 (12) | −0.0042 (8) | 0.0042 (9) | −0.0016 (9) |
C3 | 0.0468 (12) | 0.0380 (12) | 0.0586 (14) | −0.0010 (10) | 0.0044 (11) | 0.0004 (11) |
C4 | 0.0662 (16) | 0.0398 (13) | 0.0762 (18) | −0.0139 (11) | −0.0015 (14) | 0.0007 (12) |
C5 | 0.0336 (11) | 0.0393 (11) | 0.0568 (14) | 0.0026 (9) | 0.0011 (10) | 0.0017 (10) |
C6 | 0.0297 (10) | 0.0505 (12) | 0.0423 (12) | 0.0011 (9) | 0.0042 (9) | 0.0005 (10) |
C7 | 0.0349 (11) | 0.0594 (15) | 0.0493 (14) | −0.0029 (10) | 0.0042 (10) | −0.0021 (11) |
C8 | 0.0336 (12) | 0.090 (2) | 0.0625 (17) | −0.0080 (13) | 0.0014 (12) | −0.0046 (15) |
C9 | 0.0353 (13) | 0.104 (2) | 0.0637 (17) | 0.0157 (15) | −0.0003 (12) | 0.0089 (16) |
C10 | 0.0513 (14) | 0.0725 (17) | 0.0615 (16) | 0.0261 (13) | 0.0086 (13) | 0.0125 (14) |
C11 | 0.0413 (12) | 0.0545 (14) | 0.0538 (14) | 0.0100 (10) | 0.0069 (11) | 0.0033 (11) |
C12 | 0.0550 (15) | 0.0620 (17) | 0.089 (2) | −0.0124 (13) | 0.0029 (14) | −0.0045 (15) |
S—C1 | 1.679 (2) | C5—C6 | 1.469 (3) |
N1—C1 | 1.338 (2) | C5—H5 | 0.9300 |
N1—N2 | 1.373 (2) | C6—C11 | 1.393 (3) |
N1—H1N | 0.9314 | C6—C7 | 1.399 (3) |
N2—C2 | 1.296 (2) | C7—C8 | 1.398 (3) |
N3—C1 | 1.378 (2) | C7—C12 | 1.497 (3) |
N3—C2 | 1.384 (2) | C8—C9 | 1.369 (4) |
N3—N4 | 1.395 (2) | C8—H8 | 0.9300 |
N4—C5 | 1.255 (2) | C9—C10 | 1.376 (4) |
C2—C3 | 1.479 (3) | C9—H9 | 0.9300 |
C3—C4 | 1.522 (3) | C10—C11 | 1.382 (3) |
C3—H3A | 0.9700 | C10—H10 | 0.9300 |
C3—H3B | 0.9700 | C11—H11 | 0.9300 |
C4—H4A | 0.9600 | C12—H12A | 0.9600 |
C4—H4B | 0.9600 | C12—H12B | 0.9600 |
C4—H4C | 0.9600 | C12—H12C | 0.9600 |
C1—N1—N2 | 114.48 (16) | N4—C5—H5 | 120.2 |
C1—N1—H1N | 122.2 | C6—C5—H5 | 120.2 |
N2—N1—H1N | 123.2 | C11—C6—C7 | 120.14 (19) |
C2—N2—N1 | 104.15 (15) | C11—C6—C5 | 119.32 (19) |
C1—N3—C2 | 108.74 (15) | C7—C6—C5 | 120.53 (19) |
C1—N3—N4 | 132.83 (15) | C8—C7—C6 | 117.7 (2) |
C2—N3—N4 | 118.30 (15) | C8—C7—C12 | 119.6 (2) |
C5—N4—N3 | 119.38 (17) | C6—C7—C12 | 122.71 (19) |
N1—C1—N3 | 102.21 (16) | C9—C8—C7 | 121.7 (2) |
N1—C1—S | 127.10 (15) | C9—C8—H8 | 119.2 |
N3—C1—S | 130.66 (14) | C7—C8—H8 | 119.2 |
N2—C2—N3 | 110.40 (17) | C8—C9—C10 | 120.5 (2) |
N2—C2—C3 | 126.69 (18) | C8—C9—H9 | 119.8 |
N3—C2—C3 | 122.91 (17) | C10—C9—H9 | 119.8 |
C2—C3—C4 | 112.41 (18) | C9—C10—C11 | 119.3 (2) |
C2—C3—H3A | 109.1 | C9—C10—H10 | 120.3 |
C4—C3—H3A | 109.1 | C11—C10—H10 | 120.3 |
C2—C3—H3B | 109.1 | C10—C11—C6 | 120.7 (2) |
C4—C3—H3B | 109.1 | C10—C11—H11 | 119.6 |
H3A—C3—H3B | 107.9 | C6—C11—H11 | 119.6 |
C3—C4—H4A | 109.5 | C7—C12—H12A | 109.5 |
C3—C4—H4B | 109.5 | C7—C12—H12B | 109.5 |
H4A—C4—H4B | 109.5 | H12A—C12—H12B | 109.5 |
C3—C4—H4C | 109.5 | C7—C12—H12C | 109.5 |
H4A—C4—H4C | 109.5 | H12A—C12—H12C | 109.5 |
H4B—C4—H4C | 109.5 | H12B—C12—H12C | 109.5 |
N4—C5—C6 | 119.54 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···Si | 0.93 | 2.37 | 3.2899 (19) | 169 |
C5—H5···S | 0.93 | 2.54 | 3.239 (2) | 132 |
Symmetry code: (i) −x+2, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C12H14N4S |
Mr | 246.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 295 |
a, b, c (Å) | 7.7255 (15), 15.411 (3), 10.685 (2) |
β (°) | 101.032 (12) |
V (Å3) | 1248.7 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.32 × 0.28 × 0.24 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12354, 2860, 1777 |
Rint | 0.061 |
(sin θ/λ)max (Å−1) | 0.651 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.121, 1.03 |
No. of reflections | 2860 |
No. of parameters | 156 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.18, −0.21 |
Computer programs: PROCESS-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···Si | 0.93 | 2.37 | 3.2899 (19) | 169 |
C5—H5···S | 0.93 | 2.54 | 3.239 (2) | 132 |
Symmetry code: (i) −x+2, −y, −z+1. |
Acknowledgements
The work was supported by the Natural Science Foundation of Zhejiang Province, China (grant No. M203027).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Since some hydrazone derivatives have shown to be potential DNA damaging and mutagenic agents (Okabe et al., 1993), a series of new hydrazone derivatives have been prepared in our laboratory (Shan et al., 2003). As part of the ongoing investigation, the title compound has recently been prepared and its crystal structure is reported here.
The molecular structure of the title compound is shown in Fig. 1. The N4—C5 bond distance of 1.255 (2) Å is significantly shorter than C═N bond distances found in related hydrazone structures, i.g. 1.295 (2) Å in (E)-3-methoxyacetophenone 4-nitrophenylhydrazone (Fan et al., 2008), 1.2977 (18) Å in (E)-2-furyl methyl ketone 2,4-dinitrophenylhydrazone (Shan et al., 2008) and 1.293 (2) Å in benzylideneacetone 2,4-dinitrophenylhydrazone (Shan et al., 2004). The benzene and triazole rings are located on the opposite sites of the N4═C5 double bond, the molecule assumes an E-configuration.
The molecule displays a nearly coplanar structure except for methyl H atoms, the maximum atomic deviation for non-H atom is 0.1457 (18) Å (N4), and the atomic deviations for ehtyl C3 and C4 atoms are 0.011 (2) and 0.037 (2) Å, respectively. The methine group is linked to the triazolethione via intramolecular C5—H5···S hydrogen bonding (Fig. 1 and Table 1). The adjacent molecules are linked together with N1—H1N···S hydrogen bonding (Table 1), forming the centro-symmetric supramolecular dimer.
A partially overlapped arrangement is observed between the nearly parallel triazole ring and benzene ring of the adjacent molecule [dihedral angle 1.75 (11)°] (Fig. 2), the perpendicular distance of the centroid of the N3-triazole ring on the C6ii-benzene ring is 3.482 Å and the perpendicular distance of the centroid of the C6ii-benzene ring on the N3-triazole ring is 3.504 Å [symmetry code: (ii) 1 + x, y, z], these are significantly shorter than the van der Waals thickness of the aromatic ring (3.7 Å; Cotton & Wilkinson, 1972) and suggest the existence of π-π stacking in the crystal structure.