organic compounds
3′,6′-Bis(ethylamino)-2-[(2-hydroxyethyl)amino]-2′,7′-dimethylspiro[isoindoline-1,9′-xanthen]-3-one
aSchool of Chemistry and Chemical Engineering, Shanxi Datong University, Datong 037009, People's Republic of China, and bState Key Laboratory of Fine Chemicals, Dalian University of Technology, 158 Zhongshan Rd., Dalian 116012, People's Republic of China
*Correspondence e-mail: tmzhong2002@yahoo.com.cn
In the title compound, C28H32N4O3, the dihedral angle between the planes of the xanthene ring system and the spirolactam ring is 85.99 (3)°. Molecules are linked by intermolecular O—H⋯O and N—H⋯O hydrogen-bonding interactions.
Related literature
For the synthesis and related structures of et al. (2006); Wu et al. (2007); Zhang et al. (2008). For related literature on the photophysical properties and applications of see: Lakowicz (2006).
see: KoExperimental
Crystal data
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Data collection
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Refinement
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Data collection: APEX2 (Bruker 2005); cell APEX2; data reduction: APEX2; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808023611/zl2122sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808023611/zl2122Isup2.hkl
Sodium borohydride (15.2 mg, 0.4 mmol) was slowly added to a solution of 3',6'-bis(ethylamino)-2',7'-dimethyl-2-(2-oxoethylideneamino)spiro [isoindoline-1,9'-xanthen]-3-one (132 mg, 0.3 mmol) in ethanol (20 ml). The reaction mixture was stirred for 2 h at room temperature and the solvent was totally removed under reduced pressure. The crude product was dissolved in CH2Cl2 (20 ml) and 3 ml of an aqueous solution of K2CO3 was added. The organic layer was separated and dried over MgSO4. After filtration, the solvent was removed under reduced pressure. The residue was placed on a silica gel column (200–300 mesh). The column was eluted with a mixture (2:1, v/v) of petroleum ether /ethyl acetate, to give 131.5 mg of the title compound (93%). Crystals were grown by dissolving the compound in CH2Cl2 and slowly diffusing n-hexane into the solution.
Geometrically constrained hydrogen atoms were placed in calculated positions and refined using the riding model (C—H = 0.93-0.96 Å, and O—H = 0.82 Å), with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(methyl C, O). All amine hydrogen atoms were located in difference density Fourier maps, were introduced with a distance restraint (N—H = 0.89 (2) Å) and refined freely. The isotropic displacement parameter was set to Uiso(H) = 1.2Ueq(N).
Data collection: APEX2 (Bruker 2005); cell
APEX2 (Bruker 2005); data reduction: APEX2 (Bruker 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C28H32N4O3 | Z = 2 |
Mr = 472.58 | F(000) = 504 |
Triclinic, P1 | Dx = 1.238 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.3195 (18) Å | Cell parameters from 2583 reflections |
b = 9.4770 (16) Å | θ = 2.3–26.8° |
c = 15.384 (3) Å | µ = 0.08 mm−1 |
α = 94.722 (18)° | T = 298 K |
β = 107.592 (13)° | Block, colourless |
γ = 98.924 (13)° | 0.30 × 0.20 × 0.15 mm |
V = 1267.4 (4) Å3 |
Bruker APEXII CCD area-detector diffractometer | 3144 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.024 |
Graphite monochromator | θmax = 25.0°, θmin = 2.2° |
ϕ and ω scans | h = −11→11 |
8770 measured reflections | k = −11→11 |
4305 independent reflections | l = −18→18 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.045 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.121 | w = 1/[σ2(Fo2) + (0.068P)2 + 0.1313P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max < 0.001 |
4305 reflections | Δρmax = 0.34 e Å−3 |
325 parameters | Δρmin = −0.20 e Å−3 |
4 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.028 (8) |
C28H32N4O3 | γ = 98.924 (13)° |
Mr = 472.58 | V = 1267.4 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.3195 (18) Å | Mo Kα radiation |
b = 9.4770 (16) Å | µ = 0.08 mm−1 |
c = 15.384 (3) Å | T = 298 K |
α = 94.722 (18)° | 0.30 × 0.20 × 0.15 mm |
β = 107.592 (13)° |
Bruker APEXII CCD area-detector diffractometer | 3144 reflections with I > 2σ(I) |
8770 measured reflections | Rint = 0.024 |
4305 independent reflections |
R[F2 > 2σ(F2)] = 0.045 | 4 restraints |
wR(F2) = 0.121 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.34 e Å−3 |
4305 reflections | Δρmin = −0.20 e Å−3 |
325 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O2 | 0.69421 (15) | 0.29618 (12) | 0.25724 (9) | 0.0457 (3) | |
C16 | 0.8939 (2) | 0.3280 (2) | 0.19461 (12) | 0.0433 (5) | |
H16A | 0.8966 | 0.2307 | 0.1971 | 0.052* | |
C14 | 0.5894 (2) | 0.35022 (18) | 0.29116 (11) | 0.0364 (4) | |
C10 | 0.4573 (2) | 0.52933 (18) | 0.32506 (12) | 0.0393 (4) | |
H10A | 0.4422 | 0.6240 | 0.3249 | 0.047* | |
C9 | 0.5676 (2) | 0.49027 (17) | 0.28839 (11) | 0.0346 (4) | |
C20 | 0.7802 (2) | 0.53260 (18) | 0.22210 (11) | 0.0353 (4) | |
N1 | 0.73649 (16) | 0.72826 (14) | 0.32209 (9) | 0.0371 (4) | |
C8 | 0.66223 (19) | 0.59937 (17) | 0.25166 (11) | 0.0342 (4) | |
C15 | 0.7889 (2) | 0.38924 (18) | 0.22530 (11) | 0.0374 (4) | |
C13 | 0.5043 (2) | 0.25175 (19) | 0.32712 (13) | 0.0441 (5) | |
H13A | 0.5219 | 0.1578 | 0.3280 | 0.053* | |
C17 | 0.9953 (2) | 0.4115 (2) | 0.16000 (12) | 0.0443 (5) | |
C19 | 0.8840 (2) | 0.6140 (2) | 0.18778 (12) | 0.0425 (4) | |
H19A | 0.8801 | 0.7111 | 0.1853 | 0.051* | |
C11 | 0.3697 (2) | 0.43659 (19) | 0.36141 (12) | 0.0410 (4) | |
O1 | 0.72540 (17) | 0.96667 (13) | 0.35009 (10) | 0.0621 (4) | |
N4 | 1.0976 (2) | 0.3528 (2) | 0.12588 (12) | 0.0589 (5) | |
H4A | 1.175 (2) | 0.413 (2) | 0.1209 (16) | 0.071* | |
C7 | 0.56703 (19) | 0.67124 (18) | 0.17571 (11) | 0.0354 (4) | |
C12 | 0.3930 (2) | 0.29227 (19) | 0.36189 (12) | 0.0431 (5) | |
C18 | 0.9910 (2) | 0.5596 (2) | 0.15757 (12) | 0.0449 (5) | |
N2 | 0.82046 (17) | 0.70879 (16) | 0.41102 (10) | 0.0422 (4) | |
H2A | 0.787 (2) | 0.7625 (19) | 0.4486 (12) | 0.051* | |
C2 | 0.5870 (2) | 0.81693 (19) | 0.20269 (12) | 0.0414 (4) | |
N3 | 0.3075 (2) | 0.19768 (18) | 0.39963 (14) | 0.0619 (5) | |
H3A | 0.216 (2) | 0.216 (2) | 0.3996 (16) | 0.074* | |
C21 | 0.2564 (3) | 0.4877 (2) | 0.40272 (15) | 0.0576 (5) | |
H21A | 0.2557 | 0.5875 | 0.3962 | 0.086* | |
H21B | 0.2854 | 0.4766 | 0.4668 | 0.086* | |
H21C | 0.1559 | 0.4317 | 0.3714 | 0.086* | |
C1 | 0.6898 (2) | 0.85141 (18) | 0.29889 (13) | 0.0422 (4) | |
C6 | 0.4744 (2) | 0.6098 (2) | 0.08895 (12) | 0.0443 (5) | |
H6A | 0.4597 | 0.5111 | 0.0707 | 0.053* | |
C26 | 1.1000 (3) | 0.6534 (2) | 0.12199 (15) | 0.0609 (6) | |
H26A | 1.0818 | 0.7503 | 0.1259 | 0.091* | |
H26B | 1.0843 | 0.6173 | 0.0590 | 0.091* | |
H26C | 1.2035 | 0.6524 | 0.1584 | 0.091* | |
C5 | 0.4036 (2) | 0.6986 (3) | 0.02931 (13) | 0.0561 (6) | |
H5A | 0.3403 | 0.6588 | −0.0297 | 0.067* | |
C4 | 0.4252 (3) | 0.8445 (3) | 0.05583 (15) | 0.0609 (6) | |
H4B | 0.3777 | 0.9021 | 0.0142 | 0.073* | |
C3 | 0.5162 (3) | 0.9066 (2) | 0.14321 (15) | 0.0565 (6) | |
H3B | 0.5299 | 1.0050 | 0.1617 | 0.068* | |
C22 | 0.3242 (3) | 0.0484 (2) | 0.40404 (18) | 0.0770 (7) | |
H22A | 0.2842 | 0.0130 | 0.4511 | 0.092* | |
H22B | 0.4325 | 0.0445 | 0.4227 | 0.092* | |
C25 | 1.2242 (4) | 0.1710 (4) | 0.0779 (2) | 0.1053 (11) | |
H25A | 1.2292 | 0.0705 | 0.0766 | 0.158* | |
H25B | 1.3230 | 0.2277 | 0.1123 | 0.158* | |
H25C | 1.1947 | 0.1941 | 0.0161 | 0.158* | |
C24 | 1.1072 (3) | 0.2038 (3) | 0.12294 (18) | 0.0750 (7) | |
H24A | 1.0077 | 0.1456 | 0.0886 | 0.090* | |
H24B | 1.1361 | 0.1791 | 0.1850 | 0.090* | |
C23 | 0.2464 (4) | −0.0473 (3) | 0.3172 (2) | 0.1070 (11) | |
H23A | 0.2638 | −0.1433 | 0.3251 | 0.160* | |
H23B | 0.2859 | −0.0138 | 0.2703 | 0.160* | |
H23C | 0.1383 | −0.0475 | 0.2995 | 0.160* | |
C28 | 1.0649 (2) | 0.7337 (2) | 0.52897 (13) | 0.0526 (5) | |
H28A | 1.0422 | 0.6325 | 0.5356 | 0.063* | |
H28B | 1.1749 | 0.7618 | 0.5430 | 0.063* | |
C27 | 0.9862 (2) | 0.7548 (2) | 0.43216 (13) | 0.0529 (5) | |
H27A | 1.0096 | 0.8557 | 0.4249 | 0.063* | |
H27B | 1.0219 | 0.6986 | 0.3901 | 0.063* | |
O3 | 1.01619 (16) | 0.81677 (16) | 0.59124 (9) | 0.0627 (4) | |
H3C | 1.0814 | 0.8896 | 0.6149 | 0.094* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O2 | 0.0503 (8) | 0.0360 (7) | 0.0620 (8) | 0.0138 (6) | 0.0308 (7) | 0.0100 (6) |
C16 | 0.0461 (11) | 0.0459 (10) | 0.0416 (10) | 0.0196 (9) | 0.0147 (9) | 0.0048 (8) |
C14 | 0.0355 (10) | 0.0375 (9) | 0.0364 (9) | 0.0076 (8) | 0.0123 (8) | 0.0030 (7) |
C10 | 0.0409 (11) | 0.0355 (9) | 0.0440 (10) | 0.0087 (8) | 0.0167 (9) | 0.0051 (8) |
C9 | 0.0357 (10) | 0.0342 (9) | 0.0333 (9) | 0.0050 (7) | 0.0111 (8) | 0.0036 (7) |
C20 | 0.0347 (10) | 0.0390 (9) | 0.0325 (9) | 0.0078 (8) | 0.0112 (8) | 0.0025 (7) |
N1 | 0.0386 (9) | 0.0354 (8) | 0.0364 (8) | 0.0039 (6) | 0.0131 (7) | 0.0015 (6) |
C8 | 0.0358 (10) | 0.0333 (9) | 0.0336 (9) | 0.0051 (7) | 0.0130 (8) | 0.0004 (7) |
C15 | 0.0368 (10) | 0.0412 (10) | 0.0336 (9) | 0.0080 (8) | 0.0103 (8) | 0.0037 (7) |
C13 | 0.0489 (12) | 0.0335 (9) | 0.0525 (11) | 0.0073 (8) | 0.0196 (9) | 0.0089 (8) |
C17 | 0.0381 (11) | 0.0623 (12) | 0.0342 (10) | 0.0176 (9) | 0.0109 (8) | 0.0021 (8) |
C19 | 0.0421 (11) | 0.0439 (10) | 0.0447 (10) | 0.0081 (8) | 0.0184 (9) | 0.0069 (8) |
C11 | 0.0392 (11) | 0.0430 (10) | 0.0431 (10) | 0.0052 (8) | 0.0183 (9) | 0.0043 (8) |
O1 | 0.0694 (10) | 0.0368 (7) | 0.0717 (10) | 0.0053 (7) | 0.0168 (8) | −0.0085 (7) |
N4 | 0.0516 (12) | 0.0751 (13) | 0.0613 (11) | 0.0260 (10) | 0.0282 (9) | 0.0067 (9) |
C7 | 0.0344 (10) | 0.0409 (9) | 0.0361 (9) | 0.0091 (7) | 0.0170 (8) | 0.0082 (7) |
C12 | 0.0442 (11) | 0.0432 (10) | 0.0431 (10) | 0.0024 (8) | 0.0181 (9) | 0.0078 (8) |
C18 | 0.0409 (11) | 0.0559 (11) | 0.0405 (10) | 0.0086 (9) | 0.0177 (9) | 0.0042 (8) |
N2 | 0.0365 (9) | 0.0524 (9) | 0.0341 (8) | 0.0025 (7) | 0.0100 (7) | 0.0016 (7) |
C2 | 0.0420 (11) | 0.0412 (10) | 0.0465 (11) | 0.0110 (8) | 0.0193 (9) | 0.0103 (8) |
N3 | 0.0665 (13) | 0.0475 (10) | 0.0872 (13) | 0.0061 (9) | 0.0472 (11) | 0.0188 (9) |
C21 | 0.0587 (14) | 0.0569 (12) | 0.0715 (14) | 0.0131 (10) | 0.0391 (12) | 0.0143 (10) |
C1 | 0.0452 (11) | 0.0318 (9) | 0.0529 (11) | 0.0036 (8) | 0.0229 (9) | 0.0030 (8) |
C6 | 0.0424 (11) | 0.0547 (11) | 0.0391 (10) | 0.0133 (9) | 0.0165 (9) | 0.0034 (8) |
C26 | 0.0521 (13) | 0.0742 (14) | 0.0654 (14) | 0.0082 (11) | 0.0337 (11) | 0.0098 (11) |
C5 | 0.0484 (13) | 0.0871 (16) | 0.0380 (11) | 0.0237 (11) | 0.0157 (9) | 0.0102 (10) |
C4 | 0.0665 (15) | 0.0788 (16) | 0.0540 (13) | 0.0355 (12) | 0.0269 (12) | 0.0315 (11) |
C3 | 0.0665 (14) | 0.0491 (11) | 0.0667 (14) | 0.0234 (10) | 0.0304 (12) | 0.0209 (10) |
C22 | 0.092 (2) | 0.0648 (15) | 0.0916 (19) | 0.0074 (13) | 0.0534 (16) | 0.0264 (13) |
C25 | 0.099 (2) | 0.125 (2) | 0.117 (2) | 0.064 (2) | 0.0545 (19) | −0.0001 (19) |
C24 | 0.0710 (17) | 0.0829 (17) | 0.0834 (17) | 0.0393 (14) | 0.0322 (14) | 0.0044 (13) |
C23 | 0.139 (3) | 0.0716 (18) | 0.117 (3) | −0.0130 (18) | 0.070 (2) | 0.0006 (17) |
C28 | 0.0421 (12) | 0.0554 (12) | 0.0539 (12) | 0.0079 (9) | 0.0088 (10) | −0.0005 (9) |
C27 | 0.0392 (12) | 0.0676 (13) | 0.0495 (12) | 0.0039 (10) | 0.0148 (9) | 0.0041 (9) |
O3 | 0.0519 (9) | 0.0710 (9) | 0.0563 (9) | −0.0028 (7) | 0.0162 (7) | −0.0104 (7) |
O2—C15 | 1.375 (2) | C2—C1 | 1.477 (3) |
O2—C14 | 1.381 (2) | N3—C22 | 1.452 (3) |
C16—C15 | 1.388 (2) | N3—H3A | 0.898 (16) |
C16—C17 | 1.394 (3) | C21—H21A | 0.9600 |
C16—H16A | 0.9300 | C21—H21B | 0.9600 |
C14—C9 | 1.376 (2) | C21—H21C | 0.9600 |
C14—C13 | 1.388 (3) | C6—C5 | 1.385 (3) |
C10—C11 | 1.373 (3) | C6—H6A | 0.9300 |
C10—C9 | 1.395 (2) | C26—H26A | 0.9600 |
C10—H10A | 0.9300 | C26—H26B | 0.9600 |
C9—C8 | 1.510 (2) | C26—H26C | 0.9600 |
C20—C15 | 1.378 (2) | C5—C4 | 1.375 (3) |
C20—C19 | 1.397 (2) | C5—H5A | 0.9300 |
C20—C8 | 1.512 (2) | C4—C3 | 1.378 (3) |
N1—C1 | 1.346 (2) | C4—H4B | 0.9300 |
N1—N2 | 1.399 (2) | C3—H3B | 0.9300 |
N1—C8 | 1.487 (2) | C22—C23 | 1.464 (4) |
C8—C7 | 1.519 (2) | C22—H22A | 0.9700 |
C13—C12 | 1.391 (3) | C22—H22B | 0.9700 |
C13—H13A | 0.9300 | C25—C24 | 1.514 (3) |
C17—N4 | 1.383 (2) | C25—H25A | 0.9600 |
C17—C18 | 1.413 (3) | C25—H25B | 0.9600 |
C19—C18 | 1.370 (2) | C25—H25C | 0.9600 |
C19—H19A | 0.9300 | C24—H24A | 0.9700 |
C11—C12 | 1.418 (2) | C24—H24B | 0.9700 |
C11—C21 | 1.506 (2) | C23—H23A | 0.9600 |
O1—C1 | 1.229 (2) | C23—H23B | 0.9600 |
N4—C24 | 1.426 (3) | C23—H23C | 0.9600 |
N4—H4A | 0.872 (16) | C28—O3 | 1.412 (2) |
C7—C6 | 1.373 (2) | C28—C27 | 1.493 (3) |
C7—C2 | 1.376 (2) | C28—H28A | 0.9700 |
C12—N3 | 1.386 (2) | C28—H28B | 0.9700 |
C18—C26 | 1.502 (3) | C27—H27A | 0.9700 |
N2—C27 | 1.465 (2) | C27—H27B | 0.9700 |
N2—H2A | 0.892 (14) | O3—H3C | 0.8200 |
C2—C3 | 1.390 (3) | ||
C15—O2—C14 | 118.45 (13) | H21A—C21—H21B | 109.5 |
C15—C16—C17 | 120.39 (17) | C11—C21—H21C | 109.5 |
C15—C16—H16A | 119.8 | H21A—C21—H21C | 109.5 |
C17—C16—H16A | 119.8 | H21B—C21—H21C | 109.5 |
C9—C14—O2 | 123.10 (16) | O1—C1—N1 | 125.40 (18) |
C9—C14—C13 | 121.84 (16) | O1—C1—C2 | 128.51 (17) |
O2—C14—C13 | 115.05 (15) | N1—C1—C2 | 106.06 (14) |
C11—C10—C9 | 124.05 (16) | C7—C6—C5 | 118.23 (18) |
C11—C10—H10A | 118.0 | C7—C6—H6A | 120.9 |
C9—C10—H10A | 118.0 | C5—C6—H6A | 120.9 |
C14—C9—C10 | 116.65 (16) | C18—C26—H26A | 109.5 |
C14—C9—C8 | 122.29 (15) | C18—C26—H26B | 109.5 |
C10—C9—C8 | 121.01 (14) | H26A—C26—H26B | 109.5 |
C15—C20—C19 | 116.72 (16) | C18—C26—H26C | 109.5 |
C15—C20—C8 | 122.27 (16) | H26A—C26—H26C | 109.5 |
C19—C20—C8 | 120.99 (15) | H26B—C26—H26C | 109.5 |
C1—N1—N2 | 124.66 (14) | C4—C5—C6 | 121.15 (19) |
C1—N1—C8 | 114.93 (14) | C4—C5—H5A | 119.4 |
N2—N1—C8 | 118.93 (13) | C6—C5—H5A | 119.4 |
N1—C8—C9 | 110.24 (13) | C5—C4—C3 | 120.93 (19) |
N1—C8—C20 | 111.05 (13) | C5—C4—H4B | 119.5 |
C9—C8—C20 | 110.54 (13) | C3—C4—H4B | 119.5 |
N1—C8—C7 | 99.20 (12) | C4—C3—C2 | 117.61 (19) |
C9—C8—C7 | 113.69 (14) | C4—C3—H3B | 121.2 |
C20—C8—C7 | 111.64 (13) | C2—C3—H3B | 121.2 |
O2—C15—C20 | 123.17 (15) | N3—C22—C23 | 114.1 (2) |
O2—C15—C16 | 115.15 (15) | N3—C22—H22A | 108.7 |
C20—C15—C16 | 121.68 (17) | C23—C22—H22A | 108.7 |
C14—C13—C12 | 120.58 (16) | N3—C22—H22B | 108.7 |
C14—C13—H13A | 119.7 | C23—C22—H22B | 108.7 |
C12—C13—H13A | 119.7 | H22A—C22—H22B | 107.6 |
N4—C17—C16 | 121.86 (18) | C24—C25—H25A | 109.5 |
N4—C17—C18 | 118.95 (18) | C24—C25—H25B | 109.5 |
C16—C17—C18 | 119.18 (16) | H25A—C25—H25B | 109.5 |
C18—C19—C20 | 124.05 (17) | C24—C25—H25C | 109.5 |
C18—C19—H19A | 118.0 | H25A—C25—H25C | 109.5 |
C20—C19—H19A | 118.0 | H25B—C25—H25C | 109.5 |
C10—C11—C12 | 117.97 (16) | N4—C24—C25 | 110.7 (2) |
C10—C11—C21 | 121.09 (16) | N4—C24—H24A | 109.5 |
C12—C11—C21 | 120.90 (16) | C25—C24—H24A | 109.5 |
C17—N4—C24 | 123.02 (19) | N4—C24—H24B | 109.5 |
C17—N4—H4A | 116.6 (15) | C25—C24—H24B | 109.5 |
C24—N4—H4A | 118.1 (15) | H24A—C24—H24B | 108.1 |
C6—C7—C2 | 120.62 (16) | C22—C23—H23A | 109.5 |
C6—C7—C8 | 128.39 (15) | C22—C23—H23B | 109.5 |
C2—C7—C8 | 110.96 (15) | H23A—C23—H23B | 109.5 |
N3—C12—C13 | 122.25 (17) | C22—C23—H23C | 109.5 |
N3—C12—C11 | 118.83 (17) | H23A—C23—H23C | 109.5 |
C13—C12—C11 | 118.89 (16) | H23B—C23—H23C | 109.5 |
C19—C18—C17 | 117.97 (17) | O3—C28—C27 | 110.65 (16) |
C19—C18—C26 | 121.36 (18) | O3—C28—H28A | 109.5 |
C17—C18—C26 | 120.67 (17) | C27—C28—H28A | 109.5 |
N1—N2—C27 | 113.12 (14) | O3—C28—H28B | 109.5 |
N1—N2—H2A | 105.2 (12) | C27—C28—H28B | 109.5 |
C27—N2—H2A | 109.7 (13) | H28A—C28—H28B | 108.1 |
C7—C2—C3 | 121.43 (18) | N2—C27—C28 | 109.01 (16) |
C7—C2—C1 | 108.54 (15) | N2—C27—H27A | 109.9 |
C3—C2—C1 | 130.03 (17) | C28—C27—H27A | 109.9 |
C12—N3—C22 | 122.85 (18) | N2—C27—H27B | 109.9 |
C12—N3—H3A | 117.2 (16) | C28—C27—H27B | 109.9 |
C22—N3—H3A | 115.2 (16) | H27A—C27—H27B | 108.3 |
C11—C21—H21A | 109.5 | C28—O3—H3C | 109.5 |
C11—C21—H21B | 109.5 | ||
C15—O2—C14—C9 | 4.9 (2) | C9—C8—C7—C6 | −65.7 (2) |
C15—O2—C14—C13 | −176.33 (15) | C20—C8—C7—C6 | 60.2 (2) |
O2—C14—C9—C10 | 179.82 (15) | N1—C8—C7—C2 | −0.61 (17) |
C13—C14—C9—C10 | 1.1 (3) | C9—C8—C7—C2 | 116.38 (16) |
O2—C14—C9—C8 | −2.9 (3) | C20—C8—C7—C2 | −117.72 (16) |
C13—C14—C9—C8 | 178.39 (15) | C14—C13—C12—N3 | −178.99 (18) |
C11—C10—C9—C14 | −1.2 (3) | C14—C13—C12—C11 | −1.1 (3) |
C11—C10—C9—C8 | −178.52 (16) | C10—C11—C12—N3 | 178.97 (18) |
C1—N1—C8—C9 | −115.45 (16) | C21—C11—C12—N3 | 1.2 (3) |
N2—N1—C8—C9 | 51.36 (19) | C10—C11—C12—C13 | 1.0 (3) |
C1—N1—C8—C20 | 121.68 (16) | C21—C11—C12—C13 | −176.80 (17) |
N2—N1—C8—C20 | −71.50 (18) | C20—C19—C18—C17 | 1.0 (3) |
C1—N1—C8—C7 | 4.12 (17) | C20—C19—C18—C26 | −179.60 (17) |
N2—N1—C8—C7 | 170.93 (14) | N4—C17—C18—C19 | 177.03 (17) |
C14—C9—C8—N1 | −124.27 (17) | C16—C17—C18—C19 | −1.4 (3) |
C10—C9—C8—N1 | 52.9 (2) | N4—C17—C18—C26 | −2.4 (3) |
C14—C9—C8—C20 | −1.1 (2) | C16—C17—C18—C26 | 179.15 (17) |
C10—C9—C8—C20 | 176.09 (14) | C1—N1—N2—C27 | −86.1 (2) |
C14—C9—C8—C7 | 125.37 (17) | C8—N1—N2—C27 | 108.48 (17) |
C10—C9—C8—C7 | −57.4 (2) | C6—C7—C2—C3 | −0.8 (3) |
C15—C20—C8—N1 | 125.88 (17) | C8—C7—C2—C3 | 177.32 (17) |
C19—C20—C8—N1 | −55.7 (2) | C6—C7—C2—C1 | 179.23 (16) |
C15—C20—C8—C9 | 3.2 (2) | C8—C7—C2—C1 | −2.6 (2) |
C19—C20—C8—C9 | −178.44 (15) | C13—C12—N3—C22 | −1.5 (3) |
C15—C20—C8—C7 | −124.42 (17) | C11—C12—N3—C22 | −179.4 (2) |
C19—C20—C8—C7 | 54.0 (2) | N2—N1—C1—O1 | 6.8 (3) |
C14—O2—C15—C20 | −2.7 (2) | C8—N1—C1—O1 | 172.78 (17) |
C14—O2—C15—C16 | 178.35 (14) | N2—N1—C1—C2 | −171.77 (15) |
C19—C20—C15—O2 | −179.92 (15) | C8—N1—C1—C2 | −5.82 (19) |
C8—C20—C15—O2 | −1.5 (3) | C7—C2—C1—O1 | −173.45 (19) |
C19—C20—C15—C16 | −1.0 (2) | C3—C2—C1—O1 | 6.6 (3) |
C8—C20—C15—C16 | 177.45 (15) | C7—C2—C1—N1 | 5.1 (2) |
C17—C16—C15—O2 | 179.53 (15) | C3—C2—C1—N1 | −174.85 (19) |
C17—C16—C15—C20 | 0.5 (3) | C2—C7—C6—C5 | 0.8 (3) |
C9—C14—C13—C12 | 0.0 (3) | C8—C7—C6—C5 | −177.00 (17) |
O2—C14—C13—C12 | −178.83 (15) | C7—C6—C5—C4 | 0.1 (3) |
C15—C16—C17—N4 | −177.69 (16) | C6—C5—C4—C3 | −1.0 (3) |
C15—C16—C17—C18 | 0.7 (3) | C5—C4—C3—C2 | 1.0 (3) |
C15—C20—C19—C18 | 0.2 (3) | C7—C2—C3—C4 | −0.1 (3) |
C8—C20—C19—C18 | −178.24 (16) | C1—C2—C3—C4 | 179.86 (19) |
C9—C10—C11—C12 | 0.2 (3) | C12—N3—C22—C23 | −79.0 (3) |
C9—C10—C11—C21 | 177.93 (17) | C17—N4—C24—C25 | 177.3 (2) |
C16—C17—N4—C24 | 0.3 (3) | N1—N2—C27—C28 | 178.42 (14) |
C18—C17—N4—C24 | −178.14 (19) | O3—C28—C27—N2 | −60.6 (2) |
N1—C8—C7—C6 | 177.36 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O3i | 0.90 (2) | 2.19 (2) | 3.044 (2) | 160 (2) |
O3—H3C···O1ii | 0.82 | 1.98 | 2.770 (2) | 162 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C28H32N4O3 |
Mr | 472.58 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 9.3195 (18), 9.4770 (16), 15.384 (3) |
α, β, γ (°) | 94.722 (18), 107.592 (13), 98.924 (13) |
V (Å3) | 1267.4 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.30 × 0.20 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8770, 4305, 3144 |
Rint | 0.024 |
(sin θ/λ)max (Å−1) | 0.594 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.121, 1.07 |
No. of reflections | 4305 |
No. of parameters | 325 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.34, −0.20 |
Computer programs: APEX2 (Bruker 2005), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···O3i | 0.898 (16) | 2.185 (18) | 3.044 (2) | 160 (2) |
O3—H3C···O1ii | 0.82 | 1.98 | 2.770 (2) | 161.6 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+2, −z+1. |
Acknowledgements
Financial support in part by the Natural Science Foundation of China (20376010 and 20472012) and Shanxi Scholarship Council of China (200310) is gratefully acknowledged.
References
Bruker (2005). APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Ko, S.-K., Yang, Y.-K., Tae, J. & Shin, I. (2006). J. Am. Chem. Soc. 128, 14150–14155. Web of Science CrossRef PubMed CAS Google Scholar
Lakowicz, J. R. (2006). TITLE? 3rd ed., p. 67. New York:Springer. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wu, D., Huang, W., Duan, C.-Y., Lin, Z.-H. & Meng, Q.-J. (2007). Inorg. Chem. 46, 1538–1540. Web of Science CSD CrossRef PubMed CAS Google Scholar
Zhang, L.-Z., Peng, X.-J., Gao, S. & Fan, J.-L. (2008). Acta Cryst. E64, o403. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Among many fluorescent compounds, rhodamine dyes are known to have excellent photophysical properties, (Lakowicz, 2006) and they are one of the most widely used fluorophores for labeling and sensing biomolecules (Ko et al., 2006; Wu et al., 2007). There are a few single-crystal reports about rhodamine derivatives bearing a lactam moiety (Wu et al., 2007; Zhang et al., 2008). Detailed information on their molecular and crystal structures is necessary to understand their photophysical and photochemical properties.
In agreement with other reported models, (Wu et al., 2007) the main skeleton of the title molecule is formed by the xanthene ring and the spirolactam-ring. As shown in Figure 1, the atoms of the xanthene ring and spirolactam-rings are both nearly planar and are almost perpendicular to each other. R.m.s. deviations from planarity are 0.028 (1) Å for the xanthene ring and 0.033 (0) Å for the spirolactam-ring, respectively. The dihedral angle between the planes of the xanthene ring and the spirolactam ring is 85.99 (3)°.
Analysis of the crystal packing of the title molecule (Figure 2), shows that the molecules of the title compound are connected via intermolecular N3—H3A···O3 and O3—H3C···O1 hydrogen bonds (Table 1). The oxygen atom on the spirolactam-ring acts as acceptor for an O—H···O hydrogen bond from a neighboring molecule. The oxygen atom of the hydroxyl group in turn acts as acceptor for a N—H···O hydrogen bond from again another molecule, thus forming a chain with two consecutive hydrogen bonds of the type N—H···O—H···O═C. Via these hydrogen bonds molecules are connected into double stranded chains as shown in Figure 2.