organic compounds
4-[(2-Fluorophenyl)amino]-4-oxobutanoic acid
aDepartment of Chemistry, Quaid-i-Azam University, Islamabad 45320, Pakistan, and bUniversity of Sargodha, Department of Physics, Sargodha, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
The 10H10FNO3, contains dimers of the with R22(8) rings arising from intermolecular O—H⋯O hydrogen bonding through the carboxylate groups. Adjacent dimeric units are connected to each other through one N—H⋯O and two C—H⋯O intermolecular hydrogen bonds. C—H⋯O hydrogen bonds involving the aromatic ring and the O atoms of two carboxylate groups form an R33(7) ring. The is further stabilized by C—H⋯F interactions, giving rise to a three-dimensional network.
of the title compound, CExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell APEX2; data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON.
Supporting information
10.1107/S1600536808024082/fj2135sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808024082/fj2135Isup2.hkl
2-Fluoroaniline (0.1 mole, 9.56 ml) was dissolved in 30 ml of glacial acetic acid. A solution of succinic anhydride (10 g, 0.1 mole) in 50 ml glacial acetic acid was added and the mixture was stirred overnight. The precipitate which appeared was filtered, washed with distilled water and dried at 313–315 K. The acid was recrystallized from acetone. (Yield: 85%, m.p: 435 K)
The coordinates of H-atom attached with O1 and N1 were refined. The H-atoms attached with C-atoms were positioned geometrically, C—H = 0.93, and 0.97 Å for aromatic and methylene H, and constrained to ride on their parent atoms. The H-atoms were treated as isotropic with Uiso(H) = xUeq(C, N, O), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.
Data collection: APEX2 (Bruker, 2007); cell
APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2003).Fig. 1. ORTEP-3 for Windows (Farrugia, 1997) drawing of the title compound, C10H10FNO3 with the atom numbering scheme. The thermal ellipsoids are drawn at the 30% probability level. H-atoms are shown by small circles of arbitrary radii. | |
Fig. 2. The partial unit cell packing of (I) (Spek, 2003) with only H-atoms which are involved in H-bonding, showing the dimeric nature formig R22(8) ring, forming R33(7) ring through intermolecular H-bonds and the linkage of dimers through H-bonds of N—H···O type. |
C10H10FNO3 | F(000) = 440 |
Mr = 211.19 | Dx = 1.418 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2550 reflections |
a = 4.8054 (3) Å | θ = 2.1–28.7° |
b = 19.0399 (13) Å | µ = 0.12 mm−1 |
c = 11.0429 (8) Å | T = 296 K |
β = 101.821 (3)° | Needle, colorless |
V = 988.94 (12) Å3 | 0.25 × 0.15 × 0.10 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 2550 independent reflections |
Radiation source: fine-focus sealed tube | 1366 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.038 |
Detector resolution: 7.4 pixels mm-1 | θmax = 28.7°, θmin = 2.1° |
ω scans | h = −6→5 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −25→25 |
Tmin = 0.975, Tmax = 0.989 | l = −14→14 |
11668 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0685P)2 + 0.1019P] where P = (Fo2 + 2Fc2)/3 |
2550 reflections | (Δ/σ)max < 0.001 |
142 parameters | Δρmax = 0.26 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C10H10FNO3 | V = 988.94 (12) Å3 |
Mr = 211.19 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 4.8054 (3) Å | µ = 0.12 mm−1 |
b = 19.0399 (13) Å | T = 296 K |
c = 11.0429 (8) Å | 0.25 × 0.15 × 0.10 mm |
β = 101.821 (3)° |
Bruker Kappa APEXII CCD diffractometer | 2550 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1366 reflections with I > 2σ(I) |
Tmin = 0.975, Tmax = 0.989 | Rint = 0.038 |
11668 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.145 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.26 e Å−3 |
2550 reflections | Δρmin = −0.20 e Å−3 |
142 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | 1.0488 (3) | 0.33085 (7) | 0.62407 (12) | 0.0777 (5) | |
O1 | 0.0318 (3) | 0.56812 (8) | 0.11407 (14) | 0.0633 (6) | |
O2 | 0.2963 (3) | 0.47537 (8) | 0.09700 (14) | 0.0675 (6) | |
O3 | 0.2983 (3) | 0.42965 (8) | 0.37996 (15) | 0.0638 (6) | |
N1 | 0.7391 (3) | 0.38295 (8) | 0.40847 (14) | 0.0419 (5) | |
C1 | 0.2503 (4) | 0.52781 (10) | 0.15251 (18) | 0.0422 (6) | |
C2 | 0.4378 (4) | 0.55192 (10) | 0.26901 (19) | 0.0484 (6) | |
C3 | 0.6657 (4) | 0.49982 (10) | 0.32502 (19) | 0.0469 (6) | |
C4 | 0.5482 (3) | 0.43475 (10) | 0.37282 (16) | 0.0400 (6) | |
C5 | 0.6718 (4) | 0.31736 (9) | 0.45548 (17) | 0.0381 (6) | |
C6 | 0.8291 (4) | 0.29162 (10) | 0.56401 (18) | 0.0470 (6) | |
C7 | 0.7714 (5) | 0.22849 (12) | 0.6121 (2) | 0.0671 (8) | |
C8 | 0.5497 (5) | 0.18915 (12) | 0.5515 (2) | 0.0681 (9) | |
C9 | 0.3881 (5) | 0.21314 (11) | 0.4428 (2) | 0.0643 (8) | |
C10 | 0.4499 (4) | 0.27661 (11) | 0.39432 (19) | 0.0542 (7) | |
H1 | −0.070 (5) | 0.5532 (12) | 0.046 (2) | 0.0759* | |
H1A | 0.916 (4) | 0.3921 (10) | 0.4045 (18) | 0.0503* | |
H2A | 0.32139 | 0.56196 | 0.32903 | 0.0581* | |
H2B | 0.52867 | 0.59543 | 0.25277 | 0.0581* | |
H3A | 0.77241 | 0.48655 | 0.26294 | 0.0563* | |
H3B | 0.79632 | 0.52230 | 0.39250 | 0.0563* | |
H7 | 0.88285 | 0.21248 | 0.68592 | 0.0805* | |
H8 | 0.50824 | 0.14620 | 0.58383 | 0.0817* | |
H9 | 0.23582 | 0.18650 | 0.40136 | 0.0771* | |
H10 | 0.34085 | 0.29209 | 0.31962 | 0.0650* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0646 (8) | 0.0765 (9) | 0.0763 (9) | −0.0227 (7) | −0.0221 (7) | 0.0104 (7) |
O1 | 0.0610 (10) | 0.0615 (10) | 0.0597 (10) | 0.0270 (8) | −0.0055 (7) | −0.0027 (7) |
O2 | 0.0655 (10) | 0.0638 (10) | 0.0645 (10) | 0.0308 (8) | −0.0073 (8) | −0.0113 (8) |
O3 | 0.0265 (7) | 0.0653 (10) | 0.1013 (12) | 0.0009 (6) | 0.0170 (7) | 0.0277 (8) |
N1 | 0.0247 (7) | 0.0430 (9) | 0.0571 (10) | −0.0037 (7) | 0.0065 (7) | 0.0100 (7) |
C1 | 0.0396 (10) | 0.0384 (11) | 0.0494 (11) | 0.0076 (9) | 0.0113 (9) | 0.0120 (9) |
C2 | 0.0434 (10) | 0.0409 (10) | 0.0591 (12) | −0.0036 (9) | 0.0060 (9) | 0.0057 (9) |
C3 | 0.0335 (9) | 0.0497 (11) | 0.0552 (12) | −0.0062 (8) | 0.0034 (9) | 0.0103 (9) |
C4 | 0.0278 (8) | 0.0474 (11) | 0.0433 (10) | −0.0045 (8) | 0.0038 (7) | 0.0057 (8) |
C5 | 0.0311 (9) | 0.0373 (10) | 0.0465 (10) | −0.0036 (8) | 0.0094 (8) | 0.0014 (8) |
C6 | 0.0396 (10) | 0.0451 (11) | 0.0525 (11) | −0.0081 (9) | 0.0007 (9) | 0.0020 (9) |
C7 | 0.0680 (15) | 0.0628 (15) | 0.0654 (14) | −0.0041 (13) | 0.0018 (12) | 0.0211 (12) |
C8 | 0.0742 (16) | 0.0465 (12) | 0.0866 (18) | −0.0138 (12) | 0.0233 (14) | 0.0113 (12) |
C9 | 0.0606 (13) | 0.0506 (13) | 0.0804 (16) | −0.0227 (11) | 0.0114 (12) | −0.0102 (12) |
C10 | 0.0496 (12) | 0.0540 (13) | 0.0551 (12) | −0.0146 (10) | 0.0014 (9) | 0.0000 (10) |
F1—C6 | 1.351 (2) | C6—C7 | 1.365 (3) |
O1—C1 | 1.300 (2) | C7—C8 | 1.361 (3) |
O2—C1 | 1.215 (2) | C8—C9 | 1.368 (3) |
O3—C4 | 1.223 (2) | C9—C10 | 1.379 (3) |
O1—H1 | 0.86 (2) | C2—H2A | 0.9700 |
N1—C4 | 1.350 (2) | C2—H2B | 0.9700 |
N1—C5 | 1.415 (2) | C3—H3A | 0.9700 |
N1—H1A | 0.88 (2) | C3—H3B | 0.9700 |
C1—C2 | 1.484 (3) | C7—H7 | 0.9300 |
C2—C3 | 1.513 (3) | C8—H8 | 0.9300 |
C3—C4 | 1.502 (3) | C9—H9 | 0.9300 |
C5—C10 | 1.378 (3) | C10—H10 | 0.9300 |
C5—C6 | 1.370 (3) | ||
F1···N1 | 2.723 (2) | C6···C9vii | 3.566 (3) |
F1···C2i | 3.357 (2) | C9···O1viii | 3.402 (3) |
F1···H1A | 2.648 (19) | C9···C6v | 3.566 (3) |
F1···H2Aii | 2.8200 | C10···O3 | 3.000 (3) |
F1···H2Bi | 2.6100 | C1···H1iii | 2.68 (2) |
O1···O2iii | 2.664 (2) | C1···H3Av | 2.9200 |
O1···C9iv | 3.402 (3) | C4···H10 | 2.9100 |
O2···C1iii | 3.396 (2) | H1···O2iii | 1.81 (2) |
O2···C4 | 3.135 (2) | H1···C1iii | 2.68 (2) |
O2···O1iii | 2.664 (2) | H1···H1iii | 2.42 (3) |
O3···C3v | 3.262 (2) | H1A···F1 | 2.648 (19) |
O3···C1 | 3.101 (3) | H1A···O3vii | 2.04 (2) |
O3···N1v | 2.908 (2) | H1A···H3A | 2.3900 |
O3···C10 | 3.000 (3) | H1A···H3B | 2.5400 |
O1···H9iv | 2.5800 | H2A···O3 | 2.5900 |
O1···H3Av | 2.7400 | H2A···F1ii | 2.8200 |
O2···H8vi | 2.5400 | H2B···F1i | 2.6100 |
O2···H1iii | 1.81 (2) | H3A···O1vii | 2.7400 |
O2···H3A | 2.6300 | H3A···O2 | 2.6300 |
O3···H1Av | 2.04 (2) | H3A···O3vii | 2.8100 |
O3···H2A | 2.5900 | H3A···C1vii | 2.9200 |
O3···H3Av | 2.8100 | H3A···H1A | 2.3900 |
O3···H10 | 2.7200 | H3B···H1A | 2.5400 |
O3···H3Bii | 2.8000 | H3B···O3ii | 2.8000 |
N1···F1 | 2.723 (2) | H7···H10ix | 2.3900 |
N1···O3vii | 2.908 (2) | H8···O2x | 2.5400 |
C1···O3 | 3.101 (3) | H9···O1viii | 2.5800 |
C1···O2iii | 3.396 (2) | H10···O3 | 2.7200 |
C2···F1i | 3.357 (2) | H10···C4 | 2.9100 |
C3···O3vii | 3.262 (2) | H10···H7xi | 2.3900 |
C4···O2 | 3.135 (2) | ||
C1—O1—H1 | 111.6 (16) | C8—C9—C10 | 120.3 (2) |
C4—N1—C5 | 124.00 (15) | C5—C10—C9 | 120.65 (19) |
C4—N1—H1A | 116.6 (13) | C1—C2—H2A | 109.00 |
C5—N1—H1A | 119.3 (13) | C1—C2—H2B | 109.00 |
O1—C1—O2 | 122.59 (18) | C3—C2—H2A | 109.00 |
O1—C1—C2 | 114.01 (17) | C3—C2—H2B | 109.00 |
O2—C1—C2 | 123.40 (18) | H2A—C2—H2B | 108.00 |
C1—C2—C3 | 114.31 (16) | C2—C3—H3A | 109.00 |
C2—C3—C4 | 113.08 (16) | C2—C3—H3B | 109.00 |
N1—C4—C3 | 115.05 (14) | C4—C3—H3A | 109.00 |
O3—C4—C3 | 122.21 (17) | C4—C3—H3B | 109.00 |
O3—C4—N1 | 122.74 (17) | H3A—C3—H3B | 108.00 |
N1—C5—C6 | 120.67 (17) | C6—C7—H7 | 120.00 |
N1—C5—C10 | 121.94 (17) | C8—C7—H7 | 120.00 |
C6—C5—C10 | 117.39 (17) | C7—C8—H8 | 120.00 |
C5—C6—C7 | 122.39 (19) | C9—C8—H8 | 120.00 |
F1—C6—C5 | 117.86 (17) | C8—C9—H9 | 120.00 |
F1—C6—C7 | 119.76 (18) | C10—C9—H9 | 120.00 |
C6—C7—C8 | 119.6 (2) | C5—C10—H10 | 120.00 |
C7—C8—C9 | 119.6 (2) | C9—C10—H10 | 120.00 |
C5—N1—C4—O3 | 1.1 (3) | N1—C5—C6—C7 | −179.78 (19) |
C5—N1—C4—C3 | −179.64 (16) | C10—C5—C6—F1 | 179.37 (17) |
C4—N1—C5—C6 | −129.3 (2) | C10—C5—C6—C7 | −0.5 (3) |
C4—N1—C5—C10 | 51.4 (3) | N1—C5—C10—C9 | −179.55 (19) |
O1—C1—C2—C3 | 170.92 (17) | C6—C5—C10—C9 | 1.2 (3) |
O2—C1—C2—C3 | −9.5 (3) | F1—C6—C7—C8 | 179.9 (2) |
C1—C2—C3—C4 | −67.8 (2) | C5—C6—C7—C8 | −0.3 (3) |
C2—C3—C4—O3 | −9.2 (3) | C6—C7—C8—C9 | 0.3 (4) |
C2—C3—C4—N1 | 171.57 (16) | C7—C8—C9—C10 | 0.4 (4) |
N1—C5—C6—F1 | 0.1 (3) | C8—C9—C10—C5 | −1.1 (3) |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x, −y+1, −z; (iv) −x, y+1/2, −z+1/2; (v) x−1, y, z; (vi) x, −y+1/2, z−1/2; (vii) x+1, y, z; (viii) −x, y−1/2, −z+1/2; (ix) x+1, −y+1/2, z+1/2; (x) x, −y+1/2, z+1/2; (xi) x−1, −y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2iii | 0.86 (2) | 1.81 (2) | 2.664 (2) | 178 (2) |
N1—H1A···O3vii | 0.88 (2) | 2.04 (2) | 2.908 (2) | 169.7 (18) |
C8—H8···O2x | 0.93 | 2.54 | 3.435 (3) | 160 |
C9—H9···O1viii | 0.93 | 2.58 | 3.402 (3) | 147 |
C2—H2B···F1i | 0.97 | 2.61 | 3.357 (2) | 134 |
C2—H2A···F1ii | 0.97 | 2.82 | 3.602 (2) | 138 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x, −y+1, −z; (vii) x+1, y, z; (viii) −x, y−1/2, −z+1/2; (x) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C10H10FNO3 |
Mr | 211.19 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 4.8054 (3), 19.0399 (13), 11.0429 (8) |
β (°) | 101.821 (3) |
V (Å3) | 988.94 (12) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.25 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.975, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11668, 2550, 1366 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.675 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.145, 1.01 |
No. of reflections | 2550 |
No. of parameters | 142 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.20 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003), WinGX (Farrugia, 1999) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···O2i | 0.86 (2) | 1.81 (2) | 2.664 (2) | 178 (2) |
N1—H1A···O3ii | 0.88 (2) | 2.04 (2) | 2.908 (2) | 169.7 (18) |
C8—H8···O2iii | 0.93 | 2.54 | 3.435 (3) | 160 |
C9—H9···O1iv | 0.93 | 2.58 | 3.402 (3) | 147 |
C2—H2B···F1v | 0.97 | 2.61 | 3.357 (2) | 134 |
C2—H2A···F1vi | 0.97 | 2.82 | 3.602 (2) | 138 |
Symmetry codes: (i) −x, −y+1, −z; (ii) x+1, y, z; (iii) x, −y+1/2, z+1/2; (iv) −x, y−1/2, −z+1/2; (v) −x+2, −y+1, −z+1; (vi) −x+1, −y+1, −z+1. |
Acknowledgements
The authors acknowledge the Higher Education Commision, Islamabad, Pakistan, for funding the purchase of the diffractometer at GCU, Lahore. SA is also thankful to PSF for financial support under project No. PSF/R&D/C-QU/Chem(270).
References
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
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Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
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The title compound (I) results from our continuing studies into the synthesis of carboxylic acids having the possibility of coordination with more donor atoms (Shah, et al., 2008). The purpose of synthesizing (I) was to make complexes with various metals and to study the biological activity at large.
The structures of (II) 3-(3,5-dichloroanilinocarbonyl)propionic acid (Shah, et al., 2008) is the best example for comparison of geometry. In (I) the C=O bond distances for carboxylate and carbonyl group have values of (C1=O2: 1.215 (2) Å) and (C4=O3: 1.223 (2) Å) in comparison to 1.219 (3) Å and 1.225 (2) Å, respectively. The C—N bond distances are compareable within experimental errors. The crystal structure of (I) consists of cetro-symmetric dimers forming R22(8) ring (Bernstein, et al., 1995), through intermolecular H-bonding (Table 1). The adjacent dimers are connected to each other through two C—H···O intermolecular H-bonds forming R33(7) ring [O—H···O···H—C—C—H···O] as shown in Fig 2. In (I) and (II), there is similarity of H-bonding between the amino and carbonyl group. There are C—H···F interaction also (Table 1) which stabilize the title molecule. The dihedral angle between the aromatic ring (C5—C10) and (C1,C2,C3,O1,O2) have a value of 58.87 (6)°, whereas with (N1,C3,C4,O3) its value is 51.09 (16)°. The value of dihedral angle between (C1,C2,C3,O1,O2) and (N1,C3,C4,O3) is 74.17 (13)°.