metal-organic compounds
Hexakis(1H-imidazole-κN3)nickel(II) triaquatris(1H-imidazole-κN3)nickel(II) bis(naphthalene-1,4-dicarboxylate)
aDepartment of Chemistry, Zhejiang University, People's Republic of China
*Correspondence e-mail: xudj@mail.hz.zj.cn
The 3H4N2)6][Ni(C3H4N2)3(H2O)3](C12H6O4)2, contains uncoordinated naphthalenedicarboxylate dianions and two kinds of NiII complex cations, both assuming distorted octahedral geometries. One NiII ion is located on an inversion center and is coordinated by six imidazole molecules, while the other NiII ion is located on a twofold rotation axis and is coordinated by three water molecules and three imidazole molecules in a mer-NiN3O3 arrangement. The naphthalenedicarboxylate dianion links both NiII complex cations via O—H⋯O and N—H⋯O hydrogen bonding, but no π–π stacking is observed between aromatic rings in the One imidazole ligand is equally disordered over two sites about a twofold rotation axis; one N atom and one water O atom have 2.
of the title compound, [Ni(CRelated literature
For general background, see: Su & Xu (2004); Xu et al. (2007). For related structures, see: Derissen et al. (1979); Li et al. (2008).
Experimental
Crystal data
|
Refinement
|
|
Data collection: PROCESS-AUTO (Rigaku, 1998); cell PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808024215/hb2767sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808024215/hb2767Isup2.hkl
A water-ethanol solution (16 ml, 1:3 v/v) of naphthalene-1,4-dicarboxyllic acid (0.108 g, 0.5 mmol) and sodium carbonate (0.053 g, 0.5 mmol) was refluxed for 0.5 h, then nickel chloride hexahydrate (0.118 g, 0.5 mmol) was added to the above solution. The reaction mixture was refluxed for a further 6.5 h, then imidazole (0.102 g, 1.5 mmol) was added to the above solution and the reaction mixture was refluxed for another 0.5 h. After cooling to room temperature the solution was filtered. Green prisms of (I) were obtained from the filtrate after 4 d.
The N9-containing imidazole molecule is disordered over two sites, close to a twofold rotation axis, but N9 atom is located on the twofold axis and is not disordered. The disordered components were refined with a half site occupancy and bond-length restraints were used to stabilise the refinement.
The water H atoms were located in a difference Fourier map and refined as riding in as-found relative positions with Uiso(H) = 1.5Ueq(O). Other H atoms were placed in calculated positions with C—H = 0.93 Å and N—H = 0.86 Å, and refined in riding mode with Uiso(H) = 1.2Ueq(C,N). The highest peak in the final difference Fourier map is 0.10 Å from N9.
Data collection: PROCESS-AUTO (Rigaku, 1998); cell
PROCESS-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of (I) with 30% probability displacement (arbitrary spheres for H atoms). One of the disordered imidazole components has been omitted for clarify. Dashed lines indicate hydrogen bonding [symmetry codes: (i) -x + 3/2, -y + 3/2, z; (ii) -x + 3/2, -y + 1/2, z + 1]. |
[Ni(C3H4N2)6][Ni(C3H4N2)3(H2O)3](C12H6O4)2 | F(000) = 2520 |
Mr = 1212.54 | Dx = 1.451 Mg m−3 |
Orthorhombic, Pccn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ab 2ac | Cell parameters from 5668 reflections |
a = 29.301 (7) Å | θ = 2.2–24.5° |
b = 9.297 (2) Å | µ = 0.75 mm−1 |
c = 20.381 (5) Å | T = 294 K |
V = 5552 (2) Å3 | Prism, green |
Z = 4 | 0.22 × 0.15 × 0.10 mm |
Rigaku R-AXIS RAPID IP diffractometer | 4984 independent reflections |
Radiation source: fine-focus sealed tube | 2653 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.128 |
Detector resolution: 10.0 pixels mm-1 | θmax = 25.2°, θmin = 1.4° |
ω scans | h = −34→34 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −9→11 |
Tmin = 0.866, Tmax = 0.925 | l = −24→23 |
33285 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.140 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0559P)2] where P = (Fo2 + 2Fc2)/3 |
4984 reflections | (Δ/σ)max < 0.001 |
367 parameters | Δρmax = 0.95 e Å−3 |
5 restraints | Δρmin = −0.47 e Å−3 |
[Ni(C3H4N2)6][Ni(C3H4N2)3(H2O)3](C12H6O4)2 | V = 5552 (2) Å3 |
Mr = 1212.54 | Z = 4 |
Orthorhombic, Pccn | Mo Kα radiation |
a = 29.301 (7) Å | µ = 0.75 mm−1 |
b = 9.297 (2) Å | T = 294 K |
c = 20.381 (5) Å | 0.22 × 0.15 × 0.10 mm |
Rigaku R-AXIS RAPID IP diffractometer | 4984 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 2653 reflections with I > 2σ(I) |
Tmin = 0.866, Tmax = 0.925 | Rint = 0.128 |
33285 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 5 restraints |
wR(F2) = 0.140 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.95 e Å−3 |
4984 reflections | Δρmin = −0.47 e Å−3 |
367 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Ni1 | 0.5000 | 0.0000 | 0.5000 | 0.0358 (2) | |
Ni2 | 0.7500 | 0.7500 | 0.54570 (4) | 0.0380 (2) | |
N1 | 0.53093 (12) | 0.2040 (4) | 0.50465 (18) | 0.0392 (9) | |
N2 | 0.58307 (14) | 0.3703 (4) | 0.4922 (2) | 0.0586 (12) | |
H2N | 0.6058 | 0.4167 | 0.4759 | 0.070* | |
N3 | 0.54557 (13) | −0.0704 (4) | 0.57414 (17) | 0.0417 (10) | |
N4 | 0.58361 (13) | −0.2193 (4) | 0.63876 (19) | 0.0505 (11) | |
H4N | 0.5921 | −0.2980 | 0.6573 | 0.061* | |
N5 | 0.45162 (13) | 0.0630 (4) | 0.57239 (18) | 0.0399 (9) | |
N6 | 0.41513 (15) | 0.0694 (4) | 0.6666 (2) | 0.0570 (12) | |
H6N | 0.4091 | 0.0576 | 0.7075 | 0.068* | |
N7 | 0.72172 (12) | 0.9585 (4) | 0.54389 (19) | 0.0449 (10) | |
N8 | 0.69577 (14) | 1.1727 (4) | 0.5723 (2) | 0.0612 (12) | |
H8N | 0.6878 | 1.2441 | 0.5966 | 0.073* | |
O1 | 0.65246 (12) | 0.5137 (4) | 0.43190 (15) | 0.0622 (10) | |
O2 | 0.69666 (14) | 0.6205 (4) | 0.36079 (17) | 0.0887 (14) | |
O3 | 0.65981 (12) | 0.0720 (3) | 0.13293 (16) | 0.0598 (10) | |
O4 | 0.60816 (11) | −0.0274 (3) | 0.19982 (15) | 0.0556 (9) | |
O1W | 0.68332 (10) | 0.6562 (3) | 0.54323 (13) | 0.0447 (8) | |
H1A | 0.6741 | 0.6217 | 0.5028 | 0.067* | |
H1B | 0.6780 | 0.5935 | 0.5724 | 0.067* | |
O2W | 0.7500 | 0.7500 | 0.44632 (18) | 0.0498 (12) | |
H2A | 0.7342 | 0.6989 | 0.4207 | 0.075* | |
C1 | 0.56657 (18) | 0.2458 (6) | 0.4712 (2) | 0.0546 (14) | |
H1 | 0.5790 | 0.1939 | 0.4365 | 0.066* | |
C2 | 0.5574 (2) | 0.4100 (6) | 0.5438 (3) | 0.0690 (17) | |
H2 | 0.5610 | 0.4913 | 0.5698 | 0.083* | |
C3 | 0.52539 (18) | 0.3080 (5) | 0.5499 (3) | 0.0598 (15) | |
H3 | 0.5023 | 0.3089 | 0.5812 | 0.072* | |
C4 | 0.54989 (17) | −0.2028 (5) | 0.5955 (2) | 0.0494 (13) | |
H4 | 0.5312 | −0.2780 | 0.5818 | 0.059* | |
C5 | 0.60167 (18) | −0.0877 (6) | 0.6475 (3) | 0.0652 (16) | |
H5 | 0.6256 | −0.0637 | 0.6755 | 0.078* | |
C6 | 0.57841 (17) | 0.0030 (5) | 0.6078 (2) | 0.0547 (14) | |
H6 | 0.5840 | 0.1011 | 0.6040 | 0.066* | |
C7 | 0.45366 (17) | 0.0319 (5) | 0.6357 (2) | 0.0501 (13) | |
H7 | 0.4786 | −0.0106 | 0.6561 | 0.060* | |
C8 | 0.38765 (19) | 0.1290 (6) | 0.6211 (3) | 0.0700 (17) | |
H8 | 0.3587 | 0.1667 | 0.6282 | 0.084* | |
C9 | 0.40963 (19) | 0.1237 (6) | 0.5646 (3) | 0.0635 (15) | |
H9 | 0.3980 | 0.1568 | 0.5248 | 0.076* | |
C10 | 0.71259 (18) | 1.0466 (5) | 0.5928 (3) | 0.0603 (15) | |
H10 | 0.7173 | 1.0236 | 0.6367 | 0.072* | |
C11 | 0.6937 (2) | 1.1662 (6) | 0.5064 (3) | 0.0779 (18) | |
H11 | 0.6832 | 1.2378 | 0.4783 | 0.093* | |
C12 | 0.7098 (2) | 1.0357 (6) | 0.4888 (3) | 0.0743 (18) | |
H12 | 0.7124 | 1.0028 | 0.4459 | 0.089* | |
C20 | 0.65761 (16) | 0.4155 (5) | 0.3246 (2) | 0.0409 (12) | |
C21 | 0.69215 (17) | 0.3443 (5) | 0.2948 (2) | 0.0571 (14) | |
H21 | 0.7221 | 0.3675 | 0.3057 | 0.069* | |
C22 | 0.68420 (16) | 0.2359 (5) | 0.2477 (2) | 0.0541 (14) | |
H22 | 0.7090 | 0.1911 | 0.2278 | 0.065* | |
C23 | 0.64133 (15) | 0.1953 (5) | 0.2307 (2) | 0.0395 (11) | |
C24 | 0.60336 (14) | 0.2706 (5) | 0.25953 (19) | 0.0360 (11) | |
C25 | 0.55749 (15) | 0.2431 (5) | 0.2410 (2) | 0.0443 (12) | |
H25 | 0.5514 | 0.1709 | 0.2107 | 0.053* | |
C26 | 0.52247 (17) | 0.3195 (5) | 0.2666 (2) | 0.0511 (13) | |
H26 | 0.4927 | 0.2974 | 0.2544 | 0.061* | |
C27 | 0.53041 (17) | 0.4317 (5) | 0.3111 (2) | 0.0525 (14) | |
H27 | 0.5061 | 0.4849 | 0.3276 | 0.063* | |
C28 | 0.57430 (17) | 0.4625 (5) | 0.3302 (2) | 0.0493 (13) | |
H28 | 0.5794 | 0.5366 | 0.3599 | 0.059* | |
C29 | 0.61186 (15) | 0.3837 (4) | 0.3056 (2) | 0.0376 (11) | |
C30 | 0.66958 (17) | 0.5248 (5) | 0.3766 (2) | 0.0478 (13) | |
C31 | 0.63586 (17) | 0.0716 (5) | 0.1832 (2) | 0.0447 (12) | |
N9 | 0.7500 | 0.7500 | 0.6462 (3) | 0.0595 (12) | |
N10 | 0.7702 (3) | 0.7153 (9) | 0.7485 (3) | 0.0595 (12) | 0.50 |
H10A | 0.7872 | 0.7128 | 0.7829 | 0.071* | 0.50 |
C13 | 0.7844 (2) | 0.7501 (13) | 0.6881 (3) | 0.0595 (12) | 0.50 |
H13 | 0.8144 | 0.7715 | 0.6771 | 0.071* | 0.50 |
C14 | 0.7248 (3) | 0.6846 (11) | 0.7474 (4) | 0.0595 (12) | 0.50 |
H14 | 0.7062 | 0.6550 | 0.7818 | 0.071* | 0.50 |
C15 | 0.7135 (2) | 0.7078 (13) | 0.6836 (4) | 0.0595 (12) | 0.50 |
H15 | 0.6841 | 0.6963 | 0.6671 | 0.071* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0416 (5) | 0.0306 (5) | 0.0353 (4) | 0.0021 (4) | 0.0028 (4) | 0.0023 (4) |
Ni2 | 0.0463 (5) | 0.0360 (5) | 0.0316 (5) | −0.0068 (4) | 0.000 | 0.000 |
N1 | 0.042 (2) | 0.033 (2) | 0.043 (2) | −0.0010 (18) | −0.002 (2) | 0.0025 (19) |
N2 | 0.065 (3) | 0.048 (3) | 0.063 (3) | −0.020 (2) | 0.006 (2) | 0.006 (2) |
N3 | 0.052 (3) | 0.031 (2) | 0.042 (2) | 0.001 (2) | 0.001 (2) | 0.0034 (19) |
N4 | 0.053 (3) | 0.046 (3) | 0.052 (3) | 0.010 (2) | −0.007 (2) | 0.012 (2) |
N5 | 0.045 (3) | 0.033 (2) | 0.041 (2) | −0.0024 (19) | 0.0020 (19) | 0.0027 (18) |
N6 | 0.063 (3) | 0.064 (3) | 0.044 (3) | −0.002 (2) | 0.016 (2) | −0.004 (2) |
N7 | 0.048 (2) | 0.040 (2) | 0.046 (3) | −0.0051 (19) | −0.002 (2) | 0.001 (2) |
N8 | 0.062 (3) | 0.039 (3) | 0.082 (4) | 0.001 (2) | 0.006 (3) | −0.002 (3) |
O1 | 0.084 (3) | 0.066 (3) | 0.0359 (19) | −0.031 (2) | 0.0086 (19) | −0.0142 (18) |
O2 | 0.118 (3) | 0.101 (3) | 0.047 (2) | −0.069 (3) | 0.004 (2) | −0.013 (2) |
O3 | 0.084 (3) | 0.052 (2) | 0.043 (2) | −0.0058 (19) | 0.022 (2) | −0.0143 (17) |
O4 | 0.070 (2) | 0.045 (2) | 0.052 (2) | −0.0141 (18) | 0.0050 (18) | −0.0095 (17) |
O1W | 0.053 (2) | 0.047 (2) | 0.0348 (18) | −0.0090 (15) | 0.0016 (15) | 0.0027 (15) |
O2W | 0.068 (3) | 0.054 (3) | 0.028 (2) | −0.027 (2) | 0.000 | 0.000 |
C1 | 0.069 (4) | 0.046 (3) | 0.048 (3) | −0.013 (3) | 0.009 (3) | −0.010 (3) |
C2 | 0.083 (4) | 0.043 (3) | 0.081 (5) | −0.013 (3) | 0.004 (4) | −0.018 (3) |
C3 | 0.059 (4) | 0.041 (3) | 0.080 (4) | 0.000 (3) | 0.015 (3) | −0.011 (3) |
C4 | 0.053 (3) | 0.043 (3) | 0.053 (3) | 0.003 (2) | −0.007 (3) | 0.007 (3) |
C5 | 0.069 (4) | 0.051 (4) | 0.076 (4) | 0.004 (3) | −0.032 (3) | 0.001 (3) |
C6 | 0.060 (3) | 0.032 (3) | 0.073 (4) | −0.003 (3) | −0.019 (3) | 0.004 (3) |
C7 | 0.054 (3) | 0.057 (3) | 0.039 (3) | 0.001 (3) | 0.004 (3) | −0.007 (3) |
C8 | 0.059 (4) | 0.084 (5) | 0.067 (4) | 0.028 (3) | 0.022 (3) | −0.003 (3) |
C9 | 0.062 (4) | 0.070 (4) | 0.058 (4) | 0.018 (3) | 0.003 (3) | 0.010 (3) |
C10 | 0.085 (4) | 0.039 (3) | 0.057 (4) | 0.000 (3) | 0.005 (3) | 0.007 (3) |
C11 | 0.093 (5) | 0.064 (4) | 0.077 (5) | 0.026 (3) | −0.008 (4) | 0.013 (4) |
C12 | 0.106 (5) | 0.057 (4) | 0.060 (4) | 0.029 (3) | −0.012 (3) | 0.007 (3) |
C20 | 0.049 (3) | 0.038 (3) | 0.037 (3) | −0.007 (2) | 0.000 (2) | −0.007 (2) |
C21 | 0.043 (3) | 0.070 (4) | 0.058 (3) | −0.015 (3) | −0.003 (3) | −0.023 (3) |
C22 | 0.041 (3) | 0.062 (4) | 0.059 (3) | −0.002 (3) | 0.008 (3) | −0.018 (3) |
C23 | 0.040 (3) | 0.046 (3) | 0.033 (3) | −0.005 (2) | 0.001 (2) | −0.007 (2) |
C24 | 0.038 (3) | 0.041 (3) | 0.029 (2) | −0.001 (2) | −0.001 (2) | −0.001 (2) |
C25 | 0.044 (3) | 0.048 (3) | 0.041 (3) | −0.003 (3) | −0.007 (2) | −0.004 (2) |
C26 | 0.042 (3) | 0.060 (3) | 0.052 (3) | −0.001 (3) | −0.004 (3) | 0.003 (3) |
C27 | 0.048 (3) | 0.050 (3) | 0.059 (4) | 0.019 (3) | −0.003 (3) | −0.003 (3) |
C28 | 0.057 (3) | 0.048 (3) | 0.043 (3) | 0.004 (3) | 0.001 (3) | −0.002 (2) |
C29 | 0.043 (3) | 0.034 (3) | 0.036 (3) | 0.001 (2) | −0.002 (2) | 0.000 (2) |
C30 | 0.056 (3) | 0.048 (3) | 0.040 (3) | −0.013 (3) | 0.000 (3) | −0.008 (2) |
C31 | 0.057 (3) | 0.037 (3) | 0.040 (3) | 0.001 (3) | −0.011 (3) | −0.010 (2) |
N9 | 0.078 (3) | 0.062 (3) | 0.039 (2) | 0.005 (3) | 0.000 | 0.000 |
N10 | 0.078 (3) | 0.062 (3) | 0.039 (2) | 0.005 (3) | 0.000 | 0.000 |
C13 | 0.078 (3) | 0.062 (3) | 0.039 (2) | 0.005 (3) | 0.000 | 0.000 |
C14 | 0.078 (3) | 0.062 (3) | 0.039 (2) | 0.005 (3) | 0.000 | 0.000 |
C15 | 0.078 (3) | 0.062 (3) | 0.039 (2) | 0.005 (3) | 0.000 | 0.000 |
Ni1—N1 | 2.104 (3) | C4—H4 | 0.9300 |
Ni1—N1i | 2.104 (3) | C5—C6 | 1.353 (6) |
Ni1—N3 | 2.120 (4) | C5—H5 | 0.9300 |
Ni1—N3i | 2.120 (4) | C6—H6 | 0.9300 |
Ni1—N5 | 2.128 (4) | C7—H7 | 0.9300 |
Ni1—N5i | 2.128 (4) | C8—C9 | 1.321 (6) |
Ni2—O1Wii | 2.140 (3) | C8—H8 | 0.9300 |
Ni2—O1W | 2.140 (3) | C9—H9 | 0.9300 |
Ni2—O2W | 2.025 (4) | C10—H10 | 0.9300 |
Ni2—N7ii | 2.108 (4) | C11—C12 | 1.349 (7) |
Ni2—N7 | 2.108 (4) | C11—H11 | 0.9300 |
Ni2—N9ii | 2.048 (5) | C12—H12 | 0.9300 |
Ni2—N9 | 2.048 (5) | C20—C21 | 1.353 (6) |
N1—C1 | 1.306 (5) | C20—C29 | 1.426 (6) |
N1—C3 | 1.346 (6) | C20—C30 | 1.510 (6) |
N2—C1 | 1.325 (6) | C21—C22 | 1.411 (6) |
N2—C2 | 1.345 (6) | C21—H21 | 0.9300 |
N2—H2N | 0.8600 | C22—C23 | 1.357 (6) |
N3—C4 | 1.312 (5) | C22—H22 | 0.9300 |
N3—C6 | 1.365 (5) | C23—C24 | 1.440 (6) |
N4—C4 | 1.333 (5) | C23—C31 | 1.511 (6) |
N4—C5 | 1.344 (6) | C24—C25 | 1.419 (6) |
N4—H4N | 0.8600 | C24—C29 | 1.432 (5) |
N5—C7 | 1.323 (5) | C25—C26 | 1.352 (6) |
N5—C9 | 1.363 (6) | C25—H25 | 0.9300 |
N6—C7 | 1.339 (5) | C26—C27 | 1.402 (6) |
N6—C8 | 1.347 (6) | C26—H26 | 0.9300 |
N6—H6N | 0.8600 | C27—C28 | 1.374 (6) |
N7—C10 | 1.317 (6) | C27—H27 | 0.9300 |
N7—C12 | 1.377 (6) | C28—C29 | 1.414 (6) |
N8—C10 | 1.338 (6) | C28—H28 | 0.9300 |
N8—C11 | 1.347 (6) | N9—N9ii | 0.000 (10) |
N8—H8N | 0.8600 | N9—C13 | 1.3201 (11) |
O1—C30 | 1.238 (5) | N9—C13ii | 1.3201 (11) |
O2—C30 | 1.235 (5) | N9—C15ii | 1.3703 (11) |
O3—C31 | 1.243 (5) | N9—C15 | 1.3703 (11) |
O4—C31 | 1.272 (5) | N10—C13 | 1.3399 (11) |
O1W—H1A | 0.9247 | N10—C14 | 1.3603 (11) |
O1W—H1B | 0.8470 | N10—H10A | 0.8600 |
O2W—H2A | 0.8443 | C13—H13 | 0.9300 |
C1—H1 | 0.9300 | C14—C15 | 1.3599 (11) |
C2—C3 | 1.338 (7) | C14—C14ii | 1.912 (16) |
C2—H2 | 0.9300 | C14—H14 | 0.9300 |
C3—H3 | 0.9300 | C15—H15 | 0.9300 |
N1—Ni1—N1i | 180.0 | C5—C6—H6 | 124.9 |
N1—Ni1—N3 | 88.56 (14) | N3—C6—H6 | 124.9 |
N1i—Ni1—N3 | 91.44 (14) | N5—C7—N6 | 111.3 (4) |
N1—Ni1—N3i | 91.44 (14) | N5—C7—H7 | 124.3 |
N1i—Ni1—N3i | 88.56 (14) | N6—C7—H7 | 124.3 |
N3—Ni1—N3i | 180.0 | C9—C8—N6 | 107.1 (5) |
N1—Ni1—N5 | 90.44 (14) | C9—C8—H8 | 126.5 |
N1i—Ni1—N5 | 89.56 (14) | N6—C8—H8 | 126.5 |
N3—Ni1—N5 | 90.59 (14) | C8—C9—N5 | 110.7 (5) |
N3i—Ni1—N5 | 89.41 (14) | C8—C9—H9 | 124.7 |
N1—Ni1—N5i | 89.56 (14) | N5—C9—H9 | 124.7 |
N1i—Ni1—N5i | 90.44 (14) | N7—C10—N8 | 112.6 (5) |
N3—Ni1—N5i | 89.41 (14) | N7—C10—H10 | 123.7 |
N3i—Ni1—N5i | 90.59 (14) | N8—C10—H10 | 123.7 |
N5—Ni1—N5i | 180.0 | N8—C11—C12 | 106.8 (5) |
O2W—Ni2—N9 | 180.0 | N8—C11—H11 | 126.6 |
O2W—Ni2—N7ii | 89.00 (11) | C12—C11—H11 | 126.6 |
N9ii—Ni2—N7ii | 91.00 (11) | C11—C12—N7 | 109.9 (5) |
O2W—Ni2—N7 | 89.00 (11) | C11—C12—H12 | 125.0 |
N9—Ni2—N7 | 91.00 (11) | N7—C12—H12 | 125.0 |
N7ii—Ni2—N7 | 178.0 (2) | C21—C20—C29 | 118.7 (4) |
O2W—Ni2—O1Wii | 88.65 (8) | C21—C20—C30 | 118.1 (4) |
N9—Ni2—O1Wii | 91.35 (8) | C29—C20—C30 | 123.2 (4) |
N7ii—Ni2—O1Wii | 90.87 (12) | C20—C21—C22 | 122.1 (4) |
N7—Ni2—O1Wii | 89.08 (12) | C20—C21—H21 | 119.0 |
O2W—Ni2—O1W | 88.65 (8) | C22—C21—H21 | 119.0 |
N9—Ni2—O1W | 91.35 (8) | C23—C22—C21 | 121.7 (4) |
N7ii—Ni2—O1W | 89.08 (12) | C23—C22—H22 | 119.2 |
N7—Ni2—O1W | 90.87 (12) | C21—C22—H22 | 119.2 |
O1Wii—Ni2—O1W | 177.31 (15) | C22—C23—C24 | 118.4 (4) |
C1—N1—C3 | 103.9 (4) | C22—C23—C31 | 118.3 (4) |
C1—N1—Ni1 | 126.1 (3) | C24—C23—C31 | 123.3 (4) |
C3—N1—Ni1 | 128.8 (3) | C25—C24—C29 | 118.1 (4) |
C1—N2—C2 | 106.7 (4) | C25—C24—C23 | 122.4 (4) |
C1—N2—H2N | 126.7 | C29—C24—C23 | 119.4 (4) |
C2—N2—H2N | 126.7 | C26—C25—C24 | 121.5 (4) |
C4—N3—C6 | 103.5 (4) | C26—C25—H25 | 119.3 |
C4—N3—Ni1 | 126.0 (3) | C24—C25—H25 | 119.3 |
C6—N3—Ni1 | 130.4 (3) | C25—C26—C27 | 120.9 (5) |
C4—N4—C5 | 106.0 (4) | C25—C26—H26 | 119.5 |
C4—N4—H4N | 127.0 | C27—C26—H26 | 119.5 |
C5—N4—H4N | 127.0 | C28—C27—C26 | 119.6 (5) |
C7—N5—C9 | 104.2 (4) | C28—C27—H27 | 120.2 |
C7—N5—Ni1 | 125.8 (3) | C26—C27—H27 | 120.2 |
C9—N5—Ni1 | 129.3 (3) | C27—C28—C29 | 121.4 (4) |
C7—N6—C8 | 106.7 (4) | C27—C28—H28 | 119.3 |
C7—N6—H6N | 126.6 | C29—C28—H28 | 119.3 |
C8—N6—H6N | 126.6 | C28—C29—C20 | 121.9 (4) |
C10—N7—C12 | 103.9 (4) | C28—C29—C24 | 118.5 (4) |
C10—N7—Ni2 | 129.7 (3) | C20—C29—C24 | 119.5 (4) |
C12—N7—Ni2 | 126.4 (3) | O2—C30—O1 | 123.9 (4) |
C10—N8—C11 | 106.7 (5) | O2—C30—C20 | 116.8 (4) |
C10—N8—H8N | 126.6 | O1—C30—C20 | 119.3 (4) |
C11—N8—H8N | 126.6 | O3—C31—O4 | 125.6 (4) |
Ni2—O1W—H1A | 115.3 | O3—C31—C23 | 117.7 (4) |
Ni2—O1W—H1B | 115.5 | O4—C31—C23 | 116.6 (4) |
H1A—O1W—H1B | 109.4 | C13—N9—C15 | 103.6 (6) |
Ni2—O2W—H2A | 128.2 | C13—N9—Ni2 | 130.3 (4) |
N1—C1—N2 | 112.6 (4) | C15—N9—Ni2 | 123.8 (4) |
N1—C1—H1 | 123.7 | C13—N10—C14 | 109.8 (8) |
N2—C1—H1 | 123.7 | C13—N10—H10A | 125.1 |
C3—C2—N2 | 105.7 (5) | C14—N10—H10A | 125.1 |
C3—C2—H2 | 127.2 | N9—C13—N10 | 111.0 (7) |
N2—C2—H2 | 127.2 | N9—C13—H13 | 124.5 |
C2—C3—N1 | 111.2 (5) | N10—C13—H13 | 124.5 |
C2—C3—H3 | 124.4 | C15—C14—N10 | 102.8 (8) |
N1—C3—H3 | 124.4 | C15—C14—C14ii | 95.0 (5) |
N3—C4—N4 | 113.5 (4) | C15—C14—H14 | 128.6 |
N3—C4—H4 | 123.2 | N10—C14—H14 | 128.6 |
N4—C4—H4 | 123.2 | C14ii—C14—H14 | 129.9 |
N4—C5—C6 | 106.8 (5) | C14—C15—N9 | 112.8 (7) |
N4—C5—H5 | 126.6 | C14—C15—H15 | 123.6 |
C6—C5—H5 | 126.6 | N9—C15—H15 | 123.6 |
C5—C6—N3 | 110.1 (4) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+3/2, −y+3/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O1 | 0.92 | 1.87 | 2.779 (4) | 167 |
O1W—H1B···O3iii | 0.85 | 2.04 | 2.884 (4) | 172 |
O2W—H2A···O2 | 0.84 | 1.80 | 2.633 (5) | 170 |
N2—H2N···O1 | 0.86 | 1.87 | 2.724 (5) | 174 |
N4—H4N···O4iv | 0.86 | 1.90 | 2.759 (5) | 177 |
N6—H6N···O4i | 0.86 | 1.98 | 2.834 (5) | 177 |
N8—H8N···O3v | 0.86 | 2.04 | 2.876 (5) | 165 |
N10—H10A···O2vi | 0.86 | 1.87 | 2.638 (8) | 149 |
Symmetry codes: (i) −x+1, −y, −z+1; (iii) x, −y+1/2, z+1/2; (iv) x, −y−1/2, z+1/2; (v) x, −y+3/2, z+1/2; (vi) −x+3/2, y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C3H4N2)6][Ni(C3H4N2)3(H2O)3](C12H6O4)2 |
Mr | 1212.54 |
Crystal system, space group | Orthorhombic, Pccn |
Temperature (K) | 294 |
a, b, c (Å) | 29.301 (7), 9.297 (2), 20.381 (5) |
V (Å3) | 5552 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.75 |
Crystal size (mm) | 0.22 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.866, 0.925 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 33285, 4984, 2653 |
Rint | 0.128 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.140, 1.01 |
No. of reflections | 4984 |
No. of parameters | 367 |
No. of restraints | 5 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.95, −0.47 |
Computer programs: PROCESS-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Ni1—N1 | 2.104 (3) | Ni2—O2W | 2.025 (4) |
Ni1—N3 | 2.120 (4) | Ni2—N7 | 2.108 (4) |
Ni1—N5 | 2.128 (4) | Ni2—N9 | 2.048 (5) |
Ni2—O1W | 2.140 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O1 | 0.92 | 1.87 | 2.779 (4) | 167 |
O1W—H1B···O3i | 0.85 | 2.04 | 2.884 (4) | 172 |
O2W—H2A···O2 | 0.84 | 1.80 | 2.633 (5) | 170 |
N2—H2N···O1 | 0.86 | 1.87 | 2.724 (5) | 174 |
N4—H4N···O4ii | 0.86 | 1.90 | 2.759 (5) | 177 |
N6—H6N···O4iii | 0.86 | 1.98 | 2.834 (5) | 177 |
N8—H8N···O3iv | 0.86 | 2.04 | 2.876 (5) | 165 |
N10—H10A···O2v | 0.86 | 1.87 | 2.638 (8) | 149 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) x, −y−1/2, z+1/2; (iii) −x+1, −y, −z+1; (iv) x, −y+3/2, z+1/2; (v) −x+3/2, y, z+1/2. |
Acknowledgements
The work was supported by the ZIJIN project of Zhejiang University, China.
References
Altomare, A., Cascarano, G., Giacovazzo, C. & Guagliardi, A. (1993). J. Appl. Cryst. 26, 343–350. CrossRef Web of Science IUCr Journals Google Scholar
Derissen, J. L., Timmermans, C. & Schoone, J. C. (1979). Cryst. Struct. Commun. 8, 533–536. CAS Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan. Google Scholar
Li, J.-H., Nie, J.-J. & Xu, D.-J. (2008). Acta Cryst. E64, m729. Web of Science CSD CrossRef IUCr Journals Google Scholar
Rigaku (1998). PROCESS-AUTO. Rigaku Corporation, Tokyo, Japan. Google Scholar
Rigaku/MSC (2002). CrystalStructure. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Su, J.-R. & Xu, D.-J. (2004). J. Coord. Chem. 57, 223–229. Web of Science CSD CrossRef CAS Google Scholar
Xu, D.-J., Zhang, B.-Y., Su, J.-R. & Nie, J.-J. (2007). Acta Cryst. C63, m622–m624. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As part of our ongoing investigation on the nature of π-π stacking (Su & Xu, 2004; Xu et al., 2007), the title compound, (I), incorporating naphthalenedicarboxylate dianions, has recently been prepared in the laboratory and its crystal structure is reported here.
The crystal structure contains uncoordinated naphthalenedicarboxylate dianions and two independent NiII complex cations (Fig. 1). Both NiII complexes assume distorted octahedral geometry. The Ni1 atom is located in an inversion center and coordinated by six imidazole ligands, while the Ni2 atom is located on a twofold axis and coordinated by three water and three imidazole ligands. In the Ni2-containing complex cation, the O2W and N9 atoms are also located on the twofold axis, but the other atoms of the disordered N9-imidazole ring do not lie on the twofold axis and the N9-imidazole ring is tilted to the twofold axis by an angle of 11.9 (5)°, similar to 14.2 (3)° found in the MnII analogue (Li et al., 2008). The coordination bond distances (Table 1) are significantly shorter than those found in the MnII analogue (Li et al., 2008).
The uncoordinated naphthalenedicarboxylate dianion links with both NiII complex cations via O—H···O and N—H···O hydrogen bonding (Fig. 1 and Table 2). Two carboxyl groups are twisted with respect to the naphthalene ring system by dihedral angles of 56.4 (5)° and 50.4 (5)°, which are larger than those found in the structure of free naphthalenedicarboxylic acid (ca 40°; Derissen et al., 1979). No π-π stacking is observed between aromatic rings in the crystal structure.