organic compounds
3-(2-Chloro-6-fluorophenyl)-1-(2-thienyl)prop-2-en-1-one
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bCrystal Materials Research Unit, Department of Chemistry, Faculty of Science, Prince of Songkla University, Hat-Yai, Songkhla 90112, Thailand, and cDepartment of Studies in Physics, Mangalore University, Mangalagangotri, Mangalore 574 199, India
*Correspondence e-mail: hkfun@usm.my
The title chalcone derivative, C13H8ClFOS, crystallized as an with two independent molecules in the The thiophene rings in both molecules are disordered over two sites: the ratios of occupancies for the major and minor components in the two molecules are 0.820 (2):0.180 (2) and 0.853 (2):0.147 (2). The dihedral angles between the major and minor components of the thiophene and benzene rings are 1.13 (18) and 2.2 (6)°, respectively, in one molecule, with corresponding values 6.09 (17) and 1.3 (6)° in the other. Weak intramolecular C—H⋯O and C—H⋯F interactions involving the prop-2-en-1-one group generate an S(5)S(5) ring motif, whereas a weak intramolecular C—H⋯Cl contact generates an S(6) ring motif. In the molecules of both the major and minor components are linked into infinite one-dimensional chains along the b axis. The is stabilized by weak C—H⋯O, C—H⋯F, C—H⋯Cl and C—H⋯π interactions.
Related literature
For details of hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For related structures, see, for example: Fun et al. (2008); Patil et al. (2007b,c). For background to the applications of substituted see, for example: Agrinskaya et al. (1999); Chopra et al. (2007). Patil et al. (2007a).
Experimental
Crystal data
|
Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808024872/sj2529sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808024872/sj2529Isup2.hkl
The title compound was synthesized by the condensation of 2-chloro-6-fluorobenzaldehyde (0.01 mol, 1.58 g) with 2-acetylthiophene (0.01 mol, 1.07 ml) in methanol (60 ml) in the presence of a catalytic amount of sodium hydroxide solution (5 ml, 30%). After stirring (6 h), the contents of the flask were poured into ice-cold water (500 ml) and left to stand for 5 h. The resulting crude solid was filtered and dried. Colorless single crystals of the title compound suitable for x-ray
were grown by slow evaporation of an acetone solution at room temperature.All H atoms were placed in calculated positions with d(C—H) = 0.93 Å, Uiso=1.2Ueq(C) for CH and aromatic. The highest residual electron density peak is located at 0.36 Å from F1B and the deepest hole is located at 0.56 Å from Cl1B. Similarity and rigid-bond restraints were applied to the disordered atoms in the thiophene rings. Even though the structure contains heavy atoms, the
cannot be acertained from the because of the racemic of the crystal with BASF = 0.43 (7).Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).Fig. 1. The asymmetric unit of (I), showing 50% probability displacement ellipsoids and the atomic numbering. Weak intramolecular C—H···O, C—H···F and C—H···Cl interactions are drawn as dashed lines. The major disorder components are shown with the solid bonds whereas the minor disorder components are shown with open bonds. | |
Fig. 2. The crystal packing of the major components of (I), viewed along the a axis showing that the molecules are linked in infinite one-dimensional chains approximately along the b axis. Hydrogen bonds are drawn as dashed lines. |
C13H8ClFOS | F(000) = 1088 |
Mr = 266.71 | Dx = 1.568 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C -2yc | Cell parameters from 6525 reflections |
a = 12.1137 (3) Å | θ = 2.3–30.0° |
b = 10.5012 (3) Å | µ = 0.51 mm−1 |
c = 18.6689 (5) Å | T = 100 K |
β = 107.882 (3)° | Block, colorless |
V = 2260.11 (11) Å3 | 0.38 × 0.27 × 0.19 mm |
Z = 8 |
Bruker SMART APEXII CCD area-detector diffractometer | 6525 independent reflections |
Radiation source: fine-focus sealed tube | 5474 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.084 |
Detector resolution: 8.33 pixels mm-1 | θmax = 30.0°, θmin = 2.3° |
ω scans | h = −17→17 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −14→14 |
Tmin = 0.830, Tmax = 0.911 | l = −26→26 |
26405 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.171 | w = 1/[σ2(Fo2) + (0.089P)2 + 4.5385P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
6525 reflections | Δρmax = 0.83 e Å−3 |
347 parameters | Δρmin = −0.92 e Å−3 |
233 restraints | Absolute structure: Flack (1983), 3231 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.43 (7) |
C13H8ClFOS | V = 2260.11 (11) Å3 |
Mr = 266.71 | Z = 8 |
Monoclinic, Cc | Mo Kα radiation |
a = 12.1137 (3) Å | µ = 0.51 mm−1 |
b = 10.5012 (3) Å | T = 100 K |
c = 18.6689 (5) Å | 0.38 × 0.27 × 0.19 mm |
β = 107.882 (3)° |
Bruker SMART APEXII CCD area-detector diffractometer | 6525 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5474 reflections with I > 2σ(I) |
Tmin = 0.830, Tmax = 0.911 | Rint = 0.084 |
26405 measured reflections |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.171 | Δρmax = 0.83 e Å−3 |
S = 1.05 | Δρmin = −0.92 e Å−3 |
6525 reflections | Absolute structure: Flack (1983), 3231 Friedel pairs |
347 parameters | Absolute structure parameter: 0.43 (7) |
233 restraints |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1A | 0.16981 (8) | 0.06049 (9) | 0.04048 (5) | 0.0439 (2) | |
F1A | −0.22351 (13) | −0.16353 (19) | −0.01215 (9) | 0.0282 (4) | |
O1A | −0.23551 (18) | 0.1662 (2) | −0.18144 (12) | 0.0271 (5) | |
C1A | 0.0753 (3) | −0.0405 (3) | 0.05750 (18) | 0.0304 (7) | |
C2A | 0.1172 (3) | −0.1253 (3) | 0.11799 (18) | 0.0368 (8) | |
H2AA | 0.1943 | −0.1208 | 0.1478 | 0.044* | |
C3A | 0.0444 (4) | −0.2155 (3) | 0.1335 (2) | 0.0450 (9) | |
H3AA | 0.0725 | −0.2701 | 0.1744 | 0.054* | |
C4A | −0.0684 (4) | −0.2251 (3) | 0.0895 (2) | 0.0408 (9) | |
H4AA | −0.1171 | −0.2870 | 0.0989 | 0.049* | |
C5A | −0.1078 (3) | −0.1421 (3) | 0.03161 (18) | 0.0326 (7) | |
C6A | −0.0413 (3) | −0.0465 (3) | 0.01129 (16) | 0.0248 (6) | |
C7A | −0.0979 (3) | 0.0341 (3) | −0.05309 (16) | 0.0240 (6) | |
H7AA | −0.1764 | 0.0172 | −0.0752 | 0.029* | |
C8A | −0.0570 (3) | 0.1277 (3) | −0.08580 (17) | 0.0250 (6) | |
H8AA | 0.0204 | 0.1516 | −0.0661 | 0.030* | |
C9A | −0.1314 (2) | 0.1940 (2) | −0.15224 (16) | 0.0209 (6) | |
C10A | −0.0801 (2) | 0.2973 (2) | −0.18457 (15) | 0.0206 (5) | |
S1A | −0.16312 (8) | 0.37629 (9) | −0.26092 (5) | 0.0256 (2) | 0.821 (2) |
C11A | 0.0339 (4) | 0.3415 (5) | −0.1616 (3) | 0.0319 (11) | 0.821 (2) |
H11A | 0.0922 | 0.3078 | −0.1212 | 0.038* | 0.821 (2) |
C12A | 0.0509 (4) | 0.4447 (4) | −0.2072 (2) | 0.0288 (9) | 0.821 (2) |
H12A | 0.1206 | 0.4877 | −0.1997 | 0.035* | 0.821 (2) |
C13A | −0.0498 (3) | 0.4716 (3) | −0.2634 (2) | 0.0244 (8) | 0.821 (2) |
H13A | −0.0557 | 0.5350 | −0.2992 | 0.029* | 0.821 (2) |
S1X | 0.0540 (5) | 0.3451 (5) | −0.1503 (3) | 0.0244 (12)* | 0.179 (2) |
C11X | −0.1495 (13) | 0.3737 (17) | −0.2410 (11) | 0.035 (5)* | 0.179 (2) |
H11B | −0.2300 | 0.3692 | −0.2597 | 0.042* | 0.179 (2) |
C12X | −0.0788 (12) | 0.4597 (16) | −0.2659 (9) | 0.020 (4)* | 0.179 (2) |
H12B | −0.1050 | 0.5093 | −0.3091 | 0.025* | 0.179 (2) |
C13X | 0.0334 (13) | 0.4609 (17) | −0.2182 (10) | 0.026 (4)* | 0.179 (2) |
H13B | 0.0906 | 0.5170 | −0.2222 | 0.031* | 0.179 (2) |
Cl1B | −0.16932 (8) | 0.69186 (9) | −0.16305 (5) | 0.0416 (2) | |
F1B | 0.22038 (13) | 0.9255 (2) | −0.10610 (9) | 0.0291 (4) | |
O1B | 0.23296 (17) | 0.60229 (19) | 0.06450 (12) | 0.0267 (5) | |
C1B | −0.0721 (3) | 0.7932 (3) | −0.18114 (17) | 0.0250 (6) | |
C2B | −0.1171 (3) | 0.8706 (4) | −0.24489 (19) | 0.0353 (8) | |
H2BA | −0.1930 | 0.8603 | −0.2758 | 0.042* | |
C3B | −0.0460 (3) | 0.9621 (3) | −0.2606 (2) | 0.0352 (7) | |
H3BA | −0.0743 | 1.0140 | −0.3026 | 0.042* | |
C4B | 0.0651 (3) | 0.9774 (3) | −0.21507 (17) | 0.0341 (7) | |
H4BA | 0.1127 | 1.0397 | −0.2254 | 0.041* | |
C5B | 0.1055 (3) | 0.8987 (3) | −0.15358 (16) | 0.0248 (6) | |
C6B | 0.0415 (2) | 0.8020 (3) | −0.13370 (16) | 0.0206 (5) | |
C7B | 0.0981 (2) | 0.7253 (2) | −0.06705 (15) | 0.0205 (5) | |
H7BA | 0.1726 | 0.7514 | −0.0401 | 0.025* | |
C8B | 0.0591 (3) | 0.6225 (3) | −0.03853 (16) | 0.0232 (6) | |
H8BA | −0.0136 | 0.5885 | −0.0629 | 0.028* | |
C9B | 0.1334 (3) | 0.5649 (3) | 0.03181 (16) | 0.0229 (6) | |
C10B | 0.0835 (2) | 0.4603 (3) | 0.06389 (15) | 0.0195 (5) | |
S1B | 0.16576 (7) | 0.39734 (8) | 0.14734 (5) | 0.02200 (18) | 0.853 (2) |
C11B | 0.0601 (3) | 0.2918 (4) | 0.1489 (2) | 0.0220 (9) | 0.853 (2) |
H11C | 0.0662 | 0.2341 | 0.1877 | 0.026* | 0.853 (2) |
C12B | −0.0348 (3) | 0.3014 (4) | 0.0865 (2) | 0.0243 (8) | 0.853 (2) |
H12C | −0.1007 | 0.2507 | 0.0773 | 0.029* | 0.853 (2) |
C13B | −0.0199 (4) | 0.3982 (4) | 0.0380 (2) | 0.0222 (8) | 0.853 (2) |
H13C | −0.0755 | 0.4179 | −0.0074 | 0.027* | 0.853 (2) |
S1Y | −0.0509 (5) | 0.4042 (6) | 0.0261 (3) | 0.0182 (12) | 0.147 (2) |
C11Y | −0.0421 (15) | 0.293 (2) | 0.0931 (12) | 0.028 (5)* | 0.147 (2) |
H11D | −0.1016 | 0.2380 | 0.0947 | 0.034* | 0.147 (2) |
C12Y | 0.0663 (16) | 0.295 (2) | 0.1448 (13) | 0.028 (6)* | 0.147 (2) |
H12D | 0.0912 | 0.2418 | 0.1863 | 0.033* | 0.147 (2) |
C13Y | 0.1343 (15) | 0.3903 (17) | 0.1263 (10) | 0.028 (5)* | 0.147 (2) |
H13D | 0.2106 | 0.4045 | 0.1555 | 0.034* | 0.147 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.0386 (4) | 0.0458 (5) | 0.0426 (5) | −0.0123 (4) | 0.0056 (4) | 0.0065 (4) |
F1A | 0.0116 (6) | 0.0517 (10) | 0.0204 (7) | −0.0127 (7) | 0.0036 (6) | 0.0033 (7) |
O1A | 0.0269 (9) | 0.0264 (9) | 0.0285 (10) | −0.0043 (8) | 0.0090 (8) | 0.0000 (8) |
C1A | 0.0317 (15) | 0.0328 (15) | 0.0268 (14) | 0.0066 (12) | 0.0090 (12) | −0.0026 (12) |
C2A | 0.0403 (17) | 0.0429 (17) | 0.0254 (15) | 0.0147 (15) | 0.0074 (14) | −0.0034 (13) |
C3A | 0.081 (2) | 0.0263 (14) | 0.0353 (16) | 0.0153 (16) | 0.0295 (17) | 0.0072 (12) |
C4A | 0.069 (2) | 0.0250 (14) | 0.0328 (16) | 0.0000 (16) | 0.0216 (16) | 0.0028 (13) |
C5A | 0.0544 (17) | 0.0239 (13) | 0.0264 (13) | −0.0046 (13) | 0.0225 (12) | −0.0031 (11) |
C6A | 0.0343 (14) | 0.0207 (11) | 0.0227 (12) | 0.0018 (11) | 0.0138 (11) | −0.0031 (9) |
C7A | 0.0270 (12) | 0.0229 (12) | 0.0233 (12) | 0.0017 (11) | 0.0094 (10) | −0.0029 (10) |
C8A | 0.0279 (13) | 0.0218 (12) | 0.0264 (13) | −0.0039 (10) | 0.0102 (11) | 0.0016 (10) |
C9A | 0.0295 (13) | 0.0158 (10) | 0.0185 (11) | 0.0010 (10) | 0.0089 (10) | −0.0008 (9) |
C10A | 0.0254 (12) | 0.0199 (11) | 0.0193 (11) | −0.0015 (10) | 0.0110 (10) | −0.0031 (9) |
S1A | 0.0276 (4) | 0.0256 (4) | 0.0234 (4) | −0.0015 (3) | 0.0078 (3) | 0.0045 (3) |
C11A | 0.0287 (19) | 0.044 (2) | 0.0208 (18) | −0.0121 (17) | 0.0050 (15) | −0.0007 (15) |
C12A | 0.0340 (17) | 0.0274 (17) | 0.0274 (18) | −0.0059 (15) | 0.0130 (14) | −0.0062 (14) |
C13A | 0.0245 (15) | 0.0188 (14) | 0.0354 (17) | −0.0091 (13) | 0.0172 (13) | −0.0001 (12) |
Cl1B | 0.0370 (4) | 0.0403 (4) | 0.0428 (4) | −0.0098 (3) | 0.0053 (4) | 0.0077 (4) |
F1B | 0.0074 (6) | 0.0587 (11) | 0.0163 (7) | −0.0102 (7) | −0.0037 (5) | 0.0189 (7) |
O1B | 0.0227 (9) | 0.0250 (9) | 0.0307 (10) | −0.0037 (8) | 0.0059 (8) | 0.0044 (8) |
C1B | 0.0251 (13) | 0.0275 (13) | 0.0227 (13) | 0.0006 (11) | 0.0076 (11) | 0.0039 (11) |
C2B | 0.0312 (15) | 0.0475 (18) | 0.0287 (15) | 0.0180 (14) | 0.0111 (12) | 0.0114 (13) |
C3B | 0.0498 (17) | 0.0322 (14) | 0.0287 (14) | 0.0198 (14) | 0.0196 (13) | 0.0133 (12) |
C4B | 0.0592 (19) | 0.0254 (13) | 0.0247 (14) | 0.0095 (13) | 0.0235 (13) | 0.0042 (11) |
C5B | 0.0328 (14) | 0.0222 (12) | 0.0212 (12) | −0.0005 (11) | 0.0108 (11) | −0.0018 (10) |
C6B | 0.0231 (12) | 0.0189 (11) | 0.0222 (12) | 0.0012 (9) | 0.0108 (10) | −0.0025 (9) |
C7B | 0.0229 (11) | 0.0195 (11) | 0.0210 (12) | 0.0001 (10) | 0.0096 (10) | 0.0004 (9) |
C8B | 0.0256 (13) | 0.0210 (12) | 0.0220 (12) | −0.0015 (10) | 0.0059 (10) | −0.0003 (10) |
C9B | 0.0278 (13) | 0.0172 (11) | 0.0253 (13) | −0.0019 (10) | 0.0108 (11) | −0.0005 (10) |
C10B | 0.0208 (11) | 0.0191 (11) | 0.0187 (11) | 0.0013 (10) | 0.0061 (9) | −0.0008 (9) |
S1B | 0.0200 (4) | 0.0232 (3) | 0.0219 (4) | −0.0004 (3) | 0.0051 (3) | 0.0069 (3) |
C11B | 0.0279 (15) | 0.0198 (15) | 0.0219 (15) | 0.0022 (12) | 0.0132 (12) | 0.0063 (11) |
C12B | 0.0255 (15) | 0.0203 (14) | 0.0292 (17) | −0.0052 (12) | 0.0117 (13) | −0.0045 (12) |
C13B | 0.0195 (16) | 0.0220 (15) | 0.0212 (16) | 0.0032 (13) | 0.0005 (13) | 0.0009 (12) |
S1Y | 0.006 (2) | 0.029 (2) | 0.015 (2) | −0.0037 (18) | −0.0044 (16) | 0.0052 (18) |
Cl1A—C1A | 1.661 (4) | Cl1B—C1B | 1.697 (3) |
F1A—C5A | 1.407 (4) | F1B—C5B | 1.430 (3) |
O1A—C9A | 1.245 (3) | O1B—C9B | 1.237 (3) |
C1A—C2A | 1.405 (5) | C1B—C6B | 1.392 (4) |
C1A—C6A | 1.413 (4) | C1B—C2B | 1.405 (4) |
C2A—C3A | 1.385 (6) | C2B—C3B | 1.380 (5) |
C2A—H2AA | 0.9300 | C2B—H2BA | 0.9300 |
C3A—C4A | 1.365 (6) | C3B—C4B | 1.363 (5) |
C3A—H3AA | 0.9300 | C3B—H3BA | 0.9300 |
C4A—C5A | 1.355 (5) | C4B—C5B | 1.377 (4) |
C4A—H4AA | 0.9300 | C4B—H4BA | 0.9300 |
C5A—C6A | 1.410 (4) | C5B—C6B | 1.395 (4) |
C6A—C7A | 1.458 (4) | C6B—C7B | 1.464 (4) |
C7A—C8A | 1.331 (4) | C7B—C8B | 1.351 (4) |
C7A—H7AA | 0.9300 | C7B—H7BA | 0.9300 |
C8A—C9A | 1.466 (4) | C8B—C9B | 1.474 (4) |
C8A—H8AA | 0.9300 | C8B—H8BA | 0.9300 |
C9A—C10A | 1.470 (4) | C9B—C10B | 1.467 (4) |
C10A—C11X | 1.384 (14) | C10B—C13Y | 1.355 (14) |
C10A—C11A | 1.394 (5) | C10B—C13B | 1.363 (5) |
C10A—S1X | 1.631 (6) | C10B—S1Y | 1.671 (6) |
C10A—S1A | 1.688 (3) | C10B—S1B | 1.704 (3) |
S1A—C13A | 1.712 (4) | S1B—C11B | 1.700 (4) |
C11A—C12A | 1.431 (6) | C11B—C12B | 1.366 (5) |
C11A—H11A | 0.9300 | C11B—H11C | 0.9300 |
C12A—C13A | 1.372 (5) | C12B—C13B | 1.409 (6) |
C12A—H12A | 0.9300 | C12B—H12C | 0.9300 |
C13A—H13A | 0.9300 | C13B—H13C | 0.9300 |
S1X—C13X | 1.718 (14) | S1Y—C11Y | 1.692 (16) |
C11X—C12X | 1.418 (16) | C11Y—C12Y | 1.369 (16) |
C11X—H11B | 0.9300 | C11Y—H11D | 0.9300 |
C12X—C13X | 1.377 (15) | C12Y—C13Y | 1.402 (17) |
C12X—H12B | 0.9300 | C12Y—H12D | 0.9300 |
C13X—H13B | 0.9300 | C13Y—H13D | 0.9300 |
C2A—C1A—C6A | 120.6 (3) | C6B—C1B—C2B | 123.5 (3) |
C2A—C1A—Cl1A | 117.3 (3) | C6B—C1B—Cl1B | 121.7 (2) |
C6A—C1A—Cl1A | 122.0 (2) | C2B—C1B—Cl1B | 114.7 (2) |
C3A—C2A—C1A | 120.4 (3) | C3B—C2B—C1B | 118.5 (3) |
C3A—C2A—H2AA | 119.8 | C3B—C2B—H2BA | 120.8 |
C1A—C2A—H2AA | 119.8 | C1B—C2B—H2BA | 120.8 |
C4A—C3A—C2A | 120.5 (3) | C4B—C3B—C2B | 120.7 (3) |
C4A—C3A—H3AA | 119.7 | C4B—C3B—H3BA | 119.6 |
C2A—C3A—H3AA | 119.7 | C2B—C3B—H3BA | 119.6 |
C5A—C4A—C3A | 118.4 (4) | C3B—C4B—C5B | 118.6 (3) |
C5A—C4A—H4AA | 120.8 | C3B—C4B—H4BA | 120.7 |
C3A—C4A—H4AA | 120.8 | C5B—C4B—H4BA | 120.7 |
C4A—C5A—F1A | 113.8 (3) | C4B—C5B—C6B | 125.1 (3) |
C4A—C5A—C6A | 125.6 (3) | C4B—C5B—F1B | 115.3 (3) |
F1A—C5A—C6A | 120.5 (3) | C6B—C5B—F1B | 119.5 (2) |
C5A—C6A—C1A | 114.5 (3) | C1B—C6B—C5B | 113.6 (3) |
C5A—C6A—C7A | 118.2 (3) | C1B—C6B—C7B | 128.1 (3) |
C1A—C6A—C7A | 127.4 (3) | C5B—C6B—C7B | 118.3 (2) |
C8A—C7A—C6A | 131.3 (3) | C8B—C7B—C6B | 130.2 (3) |
C8A—C7A—H7AA | 114.4 | C8B—C7B—H7BA | 114.9 |
C6A—C7A—H7AA | 114.4 | C6B—C7B—H7BA | 114.9 |
C7A—C8A—C9A | 121.3 (3) | C7B—C8B—C9B | 119.2 (3) |
C7A—C8A—H8AA | 119.4 | C7B—C8B—H8BA | 120.4 |
C9A—C8A—H8AA | 119.4 | C9B—C8B—H8BA | 120.4 |
O1A—C9A—C8A | 122.5 (3) | O1B—C9B—C10B | 119.8 (3) |
O1A—C9A—C10A | 119.5 (2) | O1B—C9B—C8B | 123.0 (3) |
C8A—C9A—C10A | 118.0 (2) | C10B—C9B—C8B | 117.1 (2) |
C11X—C10A—C11A | 110.8 (7) | C13Y—C10B—C13B | 99.8 (8) |
C11X—C10A—C9A | 120.4 (7) | C13Y—C10B—C9B | 128.5 (8) |
C11A—C10A—C9A | 128.6 (3) | C13B—C10B—C9B | 131.5 (3) |
C11X—C10A—S1X | 114.8 (7) | C13Y—C10B—S1Y | 107.3 (8) |
C9A—C10A—S1X | 124.2 (3) | C9B—C10B—S1Y | 124.2 (3) |
C11A—C10A—S1A | 111.9 (3) | C13B—C10B—S1B | 110.7 (3) |
C9A—C10A—S1A | 119.5 (2) | C9B—C10B—S1B | 117.7 (2) |
S1X—C10A—S1A | 116.3 (3) | S1Y—C10B—S1B | 118.0 (3) |
C10A—S1A—C13A | 92.04 (16) | C11B—S1B—C10B | 92.09 (15) |
C10A—C11A—C12A | 112.2 (4) | C12B—C11B—S1B | 112.3 (3) |
C10A—C11A—H11A | 123.9 | C12B—C11B—H11C | 123.9 |
C12A—C11A—H11A | 123.9 | S1B—C11B—H11C | 123.9 |
C13A—C12A—C11A | 110.8 (4) | C11B—C12B—C13B | 111.1 (3) |
C13A—C12A—H12A | 124.6 | C11B—C12B—H12C | 124.4 |
C11A—C12A—H12A | 124.6 | C13B—C12B—H12C | 124.4 |
C12A—C13A—S1A | 112.9 (3) | C10B—C13B—C12B | 113.8 (3) |
C12A—C13A—H13A | 123.5 | C10B—C13B—H13C | 123.1 |
S1A—C13A—H13A | 123.5 | C12B—C13B—H13C | 123.1 |
C10A—S1X—C13X | 91.6 (6) | C10B—S1Y—C11Y | 95.7 (6) |
C10A—C11X—C12X | 109.3 (11) | C12Y—C11Y—S1Y | 109.6 (13) |
C10A—C11X—H11B | 125.3 | C12Y—C11Y—H11D | 125.2 |
C12X—C11X—H11B | 125.3 | S1Y—C11Y—H11D | 125.2 |
C13X—C12X—C11X | 111.7 (13) | C11Y—C12Y—C13Y | 110.5 (15) |
C13X—C12X—H12B | 124.1 | C11Y—C12Y—H12D | 124.7 |
C11X—C12X—H12B | 124.1 | C13Y—C12Y—H12D | 124.7 |
C12X—C13X—S1X | 111.1 (11) | C10B—C13Y—C12Y | 116.8 (13) |
C12X—C13X—H13B | 124.4 | C10B—C13Y—H13D | 121.6 |
S1X—C13X—H13B | 124.4 | C12Y—C13Y—H13D | 121.6 |
C6A—C1A—C2A—C3A | −0.5 (5) | C6B—C1B—C2B—C3B | −1.5 (5) |
Cl1A—C1A—C2A—C3A | −177.4 (3) | Cl1B—C1B—C2B—C3B | 175.4 (3) |
C1A—C2A—C3A—C4A | 1.3 (5) | C1B—C2B—C3B—C4B | −0.2 (5) |
C2A—C3A—C4A—C5A | −1.7 (5) | C2B—C3B—C4B—C5B | 0.7 (5) |
C3A—C4A—C5A—F1A | 177.4 (3) | C3B—C4B—C5B—C6B | 0.6 (5) |
C3A—C4A—C5A—C6A | 1.4 (5) | C3B—C4B—C5B—F1B | −176.4 (3) |
C4A—C5A—C6A—C1A | −0.5 (5) | C2B—C1B—C6B—C5B | 2.5 (4) |
F1A—C5A—C6A—C1A | −176.3 (3) | Cl1B—C1B—C6B—C5B | −174.2 (2) |
C4A—C5A—C6A—C7A | 179.7 (3) | C2B—C1B—C6B—C7B | −178.7 (3) |
F1A—C5A—C6A—C7A | 3.9 (4) | Cl1B—C1B—C6B—C7B | 4.6 (4) |
C2A—C1A—C6A—C5A | 0.1 (4) | C4B—C5B—C6B—C1B | −2.1 (4) |
Cl1A—C1A—C6A—C5A | 176.8 (2) | F1B—C5B—C6B—C1B | 174.8 (3) |
C2A—C1A—C6A—C7A | 179.8 (3) | C4B—C5B—C6B—C7B | 179.0 (3) |
Cl1A—C1A—C6A—C7A | −3.4 (5) | F1B—C5B—C6B—C7B | −4.1 (4) |
C5A—C6A—C7A—C8A | −177.9 (3) | C1B—C6B—C7B—C8B | 5.9 (5) |
C1A—C6A—C7A—C8A | 2.3 (5) | C5B—C6B—C7B—C8B | −175.4 (3) |
C6A—C7A—C8A—C9A | 178.5 (3) | C6B—C7B—C8B—C9B | −178.0 (3) |
C7A—C8A—C9A—O1A | −0.3 (4) | C7B—C8B—C9B—O1B | −3.7 (4) |
C7A—C8A—C9A—C10A | 179.3 (3) | C7B—C8B—C9B—C10B | 175.0 (3) |
O1A—C9A—C10A—C11X | 8.0 (11) | O1B—C9B—C10B—C13Y | −3.0 (13) |
C8A—C9A—C10A—C11X | −171.6 (11) | C8B—C9B—C10B—C13Y | 178.2 (12) |
O1A—C9A—C10A—C11A | −178.8 (4) | O1B—C9B—C10B—C13B | −176.5 (4) |
C8A—C9A—C10A—C11A | 1.6 (5) | C8B—C9B—C10B—C13B | 4.7 (5) |
O1A—C9A—C10A—S1X | 178.4 (3) | O1B—C9B—C10B—S1Y | 178.4 (4) |
C8A—C9A—C10A—S1X | −1.2 (4) | C8B—C9B—C10B—S1Y | −0.4 (5) |
O1A—C9A—C10A—S1A | −0.2 (4) | O1B—C9B—C10B—S1B | 1.6 (4) |
C8A—C9A—C10A—S1A | −179.8 (2) | C8B—C9B—C10B—S1B | −177.1 (2) |
C11X—C10A—S1A—C13A | 81 (5) | C13Y—C10B—S1B—C11B | −19 (5) |
C11A—C10A—S1A—C13A | −1.0 (3) | C13B—C10B—S1B—C11B | −1.8 (3) |
C9A—C10A—S1A—C13A | −179.7 (2) | C9B—C10B—S1B—C11B | 179.7 (3) |
S1X—C10A—S1A—C13A | 1.6 (3) | S1Y—C10B—S1B—C11B | 2.7 (3) |
C11X—C10A—C11A—C12A | −6.0 (11) | C10B—S1B—C11B—C12B | 1.5 (3) |
C9A—C10A—C11A—C12A | −179.8 (3) | S1B—C11B—C12B—C13B | −0.9 (5) |
S1X—C10A—C11A—C12A | −151 (5) | C13Y—C10B—C13B—C12B | 5.0 (11) |
S1A—C10A—C11A—C12A | 1.6 (5) | C9B—C10B—C13B—C12B | 179.9 (3) |
C10A—C11A—C12A—C13A | −1.5 (6) | S1Y—C10B—C13B—C12B | −150 (3) |
C11A—C12A—C13A—S1A | 0.8 (5) | S1B—C10B—C13B—C12B | 1.6 (4) |
C10A—S1A—C13A—C12A | 0.1 (3) | C11B—C12B—C13B—C10B | −0.5 (5) |
C11X—C10A—S1X—C13X | −7.8 (13) | C13Y—C10B—S1Y—C11Y | 1.6 (14) |
C11A—C10A—S1X—C13X | 29 (4) | C13B—C10B—S1Y—C11Y | 28 (2) |
C9A—C10A—S1X—C13X | −178.6 (8) | C9B—C10B—S1Y—C11Y | −179.5 (10) |
S1A—C10A—S1X—C13X | 0.0 (8) | S1B—C10B—S1Y—C11Y | −2.8 (10) |
C11A—C10A—C11X—C12X | 9.6 (18) | C10B—S1Y—C11Y—C12Y | −1 (2) |
C9A—C10A—C11X—C12X | −176.1 (11) | S1Y—C11Y—C12Y—C13Y | 1 (3) |
S1X—C10A—C11X—C12X | 12.7 (19) | C13B—C10B—C13Y—C12Y | −5 (2) |
S1A—C10A—C11X—C12X | −91 (6) | C9B—C10B—C13Y—C12Y | 179.7 (16) |
C10A—C11X—C12X—C13X | −12 (2) | S1Y—C10B—C13Y—C12Y | −1 (2) |
C11X—C12X—C13X—S1X | 7 (2) | S1B—C10B—C13Y—C12Y | 159 (6) |
C10A—S1X—C13X—C12X | 0.4 (16) | C11Y—C12Y—C13Y—C10B | 0 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7A—H7AA···F1A | 0.93 | 2.39 | 2.814 (4) | 107 |
C7A—H7AA···O1A | 0.93 | 2.45 | 2.827 (4) | 104 |
C8A—H8AA···Cl1A | 0.93 | 2.44 | 3.103 (3) | 129 |
C7B—H7BA···F1B | 0.93 | 2.37 | 2.794 (3) | 107 |
C7B—H7BA···O1B | 0.93 | 2.43 | 2.812 (3) | 104 |
C8B—H8BA···Cl1B | 0.93 | 2.46 | 3.105 (3) | 126 |
C11A—H11A···F1Ai | 0.93 | 2.54 | 3.375 (6) | 150 |
C12A—H12A···O1Ai | 0.93 | 2.51 | 3.402 (5) | 161 |
C12B—H12C···O1Bii | 0.93 | 2.50 | 3.427 (4) | 174 |
C3A—H3AA···Cg1iii | 0.93 | 3.06 | 3.748 (4) | 132 |
C3A—H3AA···Cg3iii | 0.93 | 3.14 | 3.825 (7) | 132 |
C3B—H3BA···Cg5iv | 0.93 | 3.02 | 3.778 (4) | 140 |
C11B—H11C···Cg6v | 0.93 | 2.81 | 3.677 (4) | 155 |
C13A—H13A···Cg2iv | 0.93 | 2.82 | 3.608 (4) | 143 |
C13A—H13A···Cg4iv | 0.93 | 2.82 | 3.625 (8) | 145 |
C12X—H12B···Cg2iv | 0.93 | 3.21 | 3.835 (16) | 126 |
C12X—H12B···Cg4iv | 0.93 | 3.18 | 3.840 (18) | 129 |
C12Y—H12D···Cg6v | 0.93 | 3.04 | 3.79 (2) | 139 |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) x−1/2, y−1/2, z; (iii) x, −y, z+1/2; (iv) x, −y+1, z−1/2; (v) x, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H8ClFOS |
Mr | 266.71 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 100 |
a, b, c (Å) | 12.1137 (3), 10.5012 (3), 18.6689 (5) |
β (°) | 107.882 (3) |
V (Å3) | 2260.11 (11) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.51 |
Crystal size (mm) | 0.38 × 0.27 × 0.19 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.830, 0.911 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 26405, 6525, 5474 |
Rint | 0.084 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.171, 1.05 |
No. of reflections | 6525 |
No. of parameters | 347 |
No. of restraints | 233 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.83, −0.92 |
Absolute structure | Flack (1983), 3231 Friedel pairs |
Absolute structure parameter | 0.43 (7) |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
C7A—H7AA···F1A | 0.93 | 2.3928 | 2.814 (4) | 107 |
C7A—H7AA···O1A | 0.93 | 2.4541 | 2.827 (4) | 104 |
C8A—H8AA···Cl1A | 0.93 | 2.4369 | 3.103 (3) | 129 |
C7B—H7BA···F1B | 0.93 | 2.3735 | 2.794 (3) | 107 |
C7B—H7BA···O1B | 0.93 | 2.4337 | 2.812 (3) | 104 |
C8B—H8BA···Cl1B | 0.93 | 2.4630 | 3.105 (3) | 126 |
C11A—H11A···F1Ai | 0.93 | 2.5353 | 3.375 (6) | 150 |
C12A—H12A···O1Ai | 0.93 | 2.5106 | 3.402 (5) | 161 |
C12B—H12C···O1Bii | 0.93 | 2.5001 | 3.427 (4) | 174 |
C3A—H3AA···Cg1iii | 0.93 | 3.0605 | 3.748 (4) | 132 |
C3A—H3AA···Cg3iii | 0.93 | 3.1388 | 3.825 (7) | 132 |
C3B—H3BA···Cg5iv | 0.93 | 3.0180 | 3.778 (4) | 140 |
C11B—H11C···Cg6v | 0.93 | 2.8123 | 3.677 (4) | 155 |
C13A—H13A···Cg2iv | 0.93 | 2.8224 | 3.608 (4) | 143 |
C13A—H13A···Cg4iv | 0.93 | 2.8232 | 3.625 (8) | 145 |
C12X—H12B···Cg2iv | 0.93 | 3.2081 | 3.835 (16) | 126 |
C12X—H12B···Cg4iv | 0.93 | 3.1837 | 3.840 (18) | 129 |
C12Y—H12D···Cg6v | 0.93 | 3.0412 | 3.79 (2) | 139 |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) x−1/2, y−1/2, z; (iii) x, −y, z+1/2; (iv) x, −y+1, z−1/2; (v) x, −y+1, z+1/2. |
Footnotes
‡Additional correspondence author, e-mail: suchada.c@psu.ac.th.
Acknowledgements
This work is supported by Department of Science and Technology (DST), Government of India, under grant No. SR/S2/LOP-17/2006. The authors also thank Universiti Sains Malaysia for the Research University Golden Goose grant No. 1001/PFIZIK/811012.
References
Agrinskaya, N. V., Lukoshkin, V. A., Kudryavtsev, V. V., Nosova, G. I., Solovskaya, N. A. & Yakimanski, A. V. (1999). Phys. Solid State. 41, 1914–1917. Web of Science CrossRef CAS Google Scholar
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–S19. CrossRef Web of Science Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2005). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Chopra, D., Mohan, T. P., Vishalakshi, B. & Guru Row, T. N. (2007). Acta Cryst. C63, o704–o710. Web of Science CSD CrossRef IUCr Journals Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Fun, H.-K., Jebas, S. R., Patil, P. S. & Dharmaprakash, S. M. (2008). Acta Cryst. E64, o1510–o1511. Web of Science CSD CrossRef IUCr Journals Google Scholar
Patil, P. S., Dharmaprakash, S. M., Ramakrishna, K., Fun, H.-K., Sai Santosh Kumar, R. & Rao, D. N. (2007a). J. Cryst. Growth. 303, 520–524. Web of Science CrossRef CAS Google Scholar
Patil, P. S., Fun, H.-K., Chantrapromma, S. & Dharmaprakash, S. M. (2007b). Acta Cryst. E63, o2497–o2498. Web of Science CSD CrossRef IUCr Journals Google Scholar
Patil, P. S., Teh, J. B.-J., Fun, H.-K., Razak, I. A. & Dharmaprakash, S. M. (2007c). Acta Cryst. E63, o2122–o2123. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Chalcone derivatives have received much attention in recent years (Chopra et al., 2007). Some chalcone derivatives have been found to have nonlinear optical properties (Agrinskaya et al., 1999). As part of our research on the synthesis and characterization of chalcone derivatives (Patil et al., 2007a, b, c), we report here the structure of the title compound.
In the asymmetric unit of the title compound (Fig. 1), there are two independent molecules A and B. The enone fragment, thiophene and benzene rings are individually essentially co-planar. The thiophene rings in both molecules are disordered over two sites which correspond to a rotation of approximately 180° about the single C—C bond (C9—C10). The approximate ratios of occupancies for the major and minor components are 0.820 (2):0.180 (2) in A and 0.853 (2):0.147 (2) in B. The dihedral angles between the major and and minor components of thiophene and the benzene rings are 1.13 (18)° [S1A/C10A–C13A with C1A–C6A] and 2.2 (6)° [S1X/C10A/C11X–C13X with C1A–C6A] in A and 6.09 (17)° [S1B/C10B–C13B with C1B–C6B] and 1.3 (6)° [S1Y/C10B/C11Y–C13Y with C1B–C6B] in B. Weak intramolecular C—H···O and C—H···F interactions involving the prop-2-en-1-one moiety generate an S(5)S(5) ring motif whereas a weak intramolecular C—H···Cl interaction generates an S(6) ring motif (Bernstein et al., 1995) (Fig. 1 and Table 1). Bond lengths and angles in molecules A and B are slightly different but all are in normal ranges (Allen et al., 1987) and comparable to those in a related structure (Fun et al., 2008).
Since the thiophene rings in both molecules are disordered over two sites, there will be four discrete modes of packing in the structure involving the major and minor components. In Fig. 2 only the molecules of the two major components are shown and they are linked into chains along the b axis. The crystal is stabilized by weak C—H···O, C—H···F and C—H···Cl interactions (Table 1) and further stabilized by C—H···π interactions (Table 1); Cg1, Cg2, Cg3, Cg4, Cg5 and Cg6 are the centroids of the S1A/C10A–C13A, S1B/C10B—C13B, S1X/C10A/C11X–C13X, S1Y/C10B/C11Y–C13Y, C1A–C6A and C1B–C6B rings, respectively.