organic compounds
4,4′-[Butane-1,4-diylbis(nitrilomethylidyne)]dibenzonitrile
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bDepartment of Chemistry, School of Science, Payame Noor University (PNU), Ardakan, Yazd, Iran
*Correspondence e-mail: hkfun@usm.my
The title Schiff base compound, C20H18N4, lies across a crystallographic inversion centre and adopts E configurations with respect to the C=N bonds. The of the compound is composed of one half-molecule. The imino group is coplanar with the benzene ring. Within the molecule, the planar units are parallel but extend in opposite directions from the methylene bridge. In the neighbouring molecules are linked together by weak intermolecular C—H⋯N hydrogen bonds involving the cyano N atoms. These form ten-membered rings, generating R22(10) ring motifs, and link the molecules along the c axis.
Related literature
For bond-length data, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995). For information on Schiff base ligands, their complexes and applications, see, for example: Fun, Kargar & Kia (2008); Fun, Kia & Kargar (2008); Fun & Kia (2008a,b); Calligaris & Randaccio (1987); Casellato & Vigato (1977).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S160053680802744X/sj2534sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680802744X/sj2534Isup2.hkl
The synthetic method has been described earlier (Fun, Kia & Kargar et al., 2008). Single crystals suitable for X-ray diffraction were obtained by evaporation of an ethanol solution at room temperature.
All of the hydrogen atoms were located from the difference Fourier map and refined freely with fixed isotropic displacement parameters.
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).C20H18N4 | F(000) = 332 |
Mr = 314.38 | Dx = 1.257 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2704 reflections |
a = 4.9720 (2) Å | θ = 3.2–30.8° |
b = 10.5047 (5) Å | µ = 0.08 mm−1 |
c = 16.0315 (6) Å | T = 100 K |
β = 97.220 (3)° | Block, colourless |
V = 830.68 (6) Å3 | 0.52 × 0.33 × 0.13 mm |
Z = 2 |
Bruker SMART APEXII CCD area-detector diffractometer | 2603 independent reflections |
Radiation source: fine-focus sealed tube | 2035 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
ϕ and ω scans | θmax = 30.9°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −7→7 |
Tmin = 0.942, Tmax = 0.990 | k = −12→15 |
10382 measured reflections | l = −23→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.143 | All H-atom parameters refined |
S = 1.12 | w = 1/[σ2(Fo2) + (0.08P)2 + 0.042P] where P = (Fo2 + 2Fc2)/3 |
2603 reflections | (Δ/σ)max = 0.001 |
145 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C20H18N4 | V = 830.68 (6) Å3 |
Mr = 314.38 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 4.9720 (2) Å | µ = 0.08 mm−1 |
b = 10.5047 (5) Å | T = 100 K |
c = 16.0315 (6) Å | 0.52 × 0.33 × 0.13 mm |
β = 97.220 (3)° |
Bruker SMART APEXII CCD area-detector diffractometer | 2603 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2035 reflections with I > 2σ(I) |
Tmin = 0.942, Tmax = 0.990 | Rint = 0.027 |
10382 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.143 | All H-atom parameters refined |
S = 1.12 | Δρmax = 0.31 e Å−3 |
2603 reflections | Δρmin = −0.20 e Å−3 |
145 parameters |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.31548 (17) | 0.07369 (8) | 0.67193 (5) | 0.0242 (2) | |
N2 | −0.5866 (2) | 0.17550 (9) | 1.01544 (6) | 0.0364 (3) | |
C1 | 0.0130 (2) | 0.06350 (9) | 0.81305 (6) | 0.0255 (2) | |
C2 | −0.1490 (2) | 0.06318 (10) | 0.87727 (6) | 0.0269 (2) | |
C3 | −0.3002 (2) | 0.17138 (9) | 0.89127 (6) | 0.0240 (2) | |
C4 | −0.2917 (2) | 0.27859 (10) | 0.84069 (6) | 0.0260 (2) | |
C5 | −0.1254 (2) | 0.27847 (10) | 0.77740 (6) | 0.0246 (2) | |
C6 | 0.02661 (18) | 0.17141 (9) | 0.76284 (6) | 0.0213 (2) | |
C7 | 0.20222 (19) | 0.17330 (9) | 0.69517 (6) | 0.0218 (2) | |
C8 | 0.49150 (19) | 0.08750 (10) | 0.60619 (6) | 0.0245 (2) | |
C9 | 0.39698 (18) | 0.00237 (9) | 0.53129 (6) | 0.0226 (2) | |
C10 | −0.4614 (2) | 0.17317 (10) | 0.95980 (6) | 0.0276 (2) | |
H1 | 0.121 (3) | −0.0110 (13) | 0.8041 (8) | 0.033 (3)* | |
H2 | −0.153 (3) | −0.0091 (13) | 0.9122 (8) | 0.035 (3)* | |
H4 | −0.401 (3) | 0.3560 (13) | 0.8497 (8) | 0.032 (3)* | |
H5 | −0.116 (2) | 0.3552 (12) | 0.7446 (8) | 0.033 (3)* | |
H7 | 0.224 (2) | 0.2575 (12) | 0.6706 (8) | 0.028 (3)* | |
H8A | 0.502 (2) | 0.1786 (11) | 0.5893 (8) | 0.028 (3)* | |
H8B | 0.678 (2) | 0.0626 (11) | 0.6313 (7) | 0.025 (3)* | |
H9A | 0.222 (2) | 0.0346 (11) | 0.5017 (7) | 0.024 (3)* | |
H9B | 0.363 (2) | −0.0864 (12) | 0.5502 (8) | 0.029 (3)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0259 (4) | 0.0289 (4) | 0.0189 (4) | −0.0028 (3) | 0.0071 (3) | −0.0027 (3) |
N2 | 0.0469 (6) | 0.0336 (5) | 0.0326 (5) | −0.0050 (4) | 0.0199 (4) | −0.0056 (4) |
C1 | 0.0297 (5) | 0.0240 (5) | 0.0242 (5) | 0.0005 (4) | 0.0086 (4) | −0.0012 (4) |
C2 | 0.0333 (5) | 0.0267 (5) | 0.0225 (5) | −0.0032 (4) | 0.0102 (4) | 0.0004 (4) |
C3 | 0.0246 (5) | 0.0285 (5) | 0.0199 (5) | −0.0065 (4) | 0.0067 (3) | −0.0060 (3) |
C4 | 0.0277 (5) | 0.0265 (5) | 0.0248 (5) | −0.0017 (4) | 0.0079 (4) | −0.0046 (4) |
C5 | 0.0287 (5) | 0.0241 (5) | 0.0221 (5) | −0.0022 (4) | 0.0073 (4) | −0.0009 (3) |
C6 | 0.0213 (4) | 0.0247 (5) | 0.0183 (4) | −0.0041 (3) | 0.0041 (3) | −0.0040 (3) |
C7 | 0.0231 (4) | 0.0248 (5) | 0.0182 (4) | −0.0047 (3) | 0.0045 (3) | −0.0018 (3) |
C8 | 0.0229 (5) | 0.0321 (5) | 0.0200 (5) | −0.0042 (4) | 0.0080 (3) | −0.0036 (4) |
C9 | 0.0189 (4) | 0.0307 (5) | 0.0189 (4) | −0.0028 (4) | 0.0052 (3) | −0.0036 (4) |
C10 | 0.0325 (5) | 0.0267 (5) | 0.0252 (5) | −0.0055 (4) | 0.0104 (4) | −0.0054 (4) |
N1—C7 | 1.2663 (13) | C4—H4 | 0.999 (13) |
N1—C8 | 1.4594 (12) | C5—C6 | 1.3910 (14) |
N2—C10 | 1.1505 (13) | C5—H5 | 0.967 (13) |
C1—C2 | 1.3845 (14) | C6—C7 | 1.4757 (13) |
C1—C6 | 1.3969 (14) | C7—H7 | 0.979 (13) |
C1—H1 | 0.971 (13) | C8—C9 | 1.5233 (13) |
C2—C3 | 1.3963 (15) | C8—H8A | 0.998 (12) |
C2—H2 | 0.946 (14) | C8—H8B | 0.996 (12) |
C3—C4 | 1.3916 (14) | C9—C9i | 1.5220 (18) |
C3—C10 | 1.4392 (14) | C9—H9A | 0.997 (11) |
C4—C5 | 1.3869 (14) | C9—H9B | 1.002 (12) |
C7—N1—C8 | 117.36 (8) | C1—C6—C7 | 120.70 (8) |
C2—C1—C6 | 120.36 (9) | N1—C7—C6 | 122.09 (9) |
C2—C1—H1 | 119.5 (7) | N1—C7—H7 | 123.5 (7) |
C6—C1—H1 | 120.1 (7) | C6—C7—H7 | 114.4 (7) |
C1—C2—C3 | 119.52 (9) | N1—C8—C9 | 110.94 (8) |
C1—C2—H2 | 120.1 (8) | N1—C8—H8A | 110.5 (7) |
C3—C2—H2 | 120.3 (8) | C9—C8—H8A | 111.8 (7) |
C4—C3—C2 | 120.58 (9) | N1—C8—H8B | 107.0 (7) |
C4—C3—C10 | 119.66 (9) | C9—C8—H8B | 110.1 (7) |
C2—C3—C10 | 119.75 (9) | H8A—C8—H8B | 106.4 (10) |
C5—C4—C3 | 119.35 (9) | C9i—C9—C8 | 111.85 (9) |
C5—C4—H4 | 119.5 (7) | C9i—C9—H9A | 108.5 (6) |
C3—C4—H4 | 121.2 (7) | C8—C9—H9A | 109.9 (7) |
C4—C5—C6 | 120.66 (9) | C9i—C9—H9B | 108.8 (7) |
C4—C5—H5 | 118.1 (8) | C8—C9—H9B | 110.8 (7) |
C6—C5—H5 | 121.2 (8) | H9A—C9—H9B | 106.8 (10) |
C5—C6—C1 | 119.52 (9) | N2—C10—C3 | 178.83 (11) |
C5—C6—C7 | 119.78 (8) | ||
C6—C1—C2—C3 | 0.35 (15) | C2—C1—C6—C7 | 178.98 (9) |
C1—C2—C3—C4 | 0.77 (15) | C8—N1—C7—C6 | −178.16 (8) |
C1—C2—C3—C10 | −177.82 (9) | C5—C6—C7—N1 | −170.25 (9) |
C2—C3—C4—C5 | −1.76 (15) | C1—C6—C7—N1 | 10.32 (14) |
C10—C3—C4—C5 | 176.82 (9) | C7—N1—C8—C9 | −122.71 (9) |
C3—C4—C5—C6 | 1.66 (14) | N1—C8—C9—C9i | −170.18 (10) |
C4—C5—C6—C1 | −0.57 (15) | C4—C3—C10—N2 | −87 (6) |
C4—C5—C6—C7 | 180.00 (8) | C2—C3—C10—N2 | 92 (6) |
C2—C1—C6—C5 | −0.45 (15) |
Symmetry code: (i) −x+1, −y, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···N2ii | 0.945 (13) | 2.541 (14) | 3.3973 (14) | 150.8 (12) |
Symmetry code: (ii) −x−1, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | C20H18N4 |
Mr | 314.38 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 100 |
a, b, c (Å) | 4.9720 (2), 10.5047 (5), 16.0315 (6) |
β (°) | 97.220 (3) |
V (Å3) | 830.68 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.52 × 0.33 × 0.13 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.942, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10382, 2603, 2035 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.722 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.143, 1.12 |
No. of reflections | 2603 |
No. of parameters | 145 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.31, −0.20 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2···N2i | 0.945 (13) | 2.541 (14) | 3.3973 (14) | 150.8 (12) |
Symmetry code: (i) −x−1, −y, −z+2. |
Footnotes
‡Additional correspondence author, e-mail: hadi_kargar@yahoo.com.
Acknowledgements
HKF and RK thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund (grant No. 305/PFIZIK/613312). RK thanks Universiti Sains Malaysia for the award of a post-doctoral research fellowship. HK thanks PNU for financial support.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–S19. CrossRef Web of Science Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (2005). APEX2, SAINT and SADABS (Version 2004/1). Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Calligaris, M. & Randaccio, L. (1987). Comprehensive Coordination Chemistry, Vol. 2, edited by G. Wilkinson, pp. 715–738. London: Pergamon. Google Scholar
Casellato, U. & Vigato, P. A. (1977). Coord. Chem. Rev. 23, 31–50. CrossRef CAS Web of Science Google Scholar
Fun, H.-K., Kargar, H. & Kia, R. (2008). Acta Cryst. E64, o1308. Web of Science CSD CrossRef IUCr Journals Google Scholar
Fun, H.-K. & Kia, R. (2008a). Acta Cryst. E64, m1081–m1082. Web of Science CSD CrossRef IUCr Journals Google Scholar
Fun, H.-K. & Kia, R. (2008b). Acta Cryst. E64, m1116–m1117. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Fun, H.-K., Kia, R. & Kargar, H. (2008). Acta Cryst. E64, o1335. Web of Science CSD CrossRef IUCr Journals Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The condensation of primary amines with carbonyl compounds yields Schiff base compounds (Casellato & Vigato, 1977); these are still one of the most prevalent mixed-donor ligands in coordination chemistry. In the past two decades, the synthesis, structure and properties of Schiff base complexes have stimulated much interest due to their noteworthy contributions in single molecule-based magnetism, materials science and the catalysis of many reactions such as carbonylation, hydroformylation, reduction, oxidation, epoxidation and hydrolysis (Casellato & Vigato 1977). However, only a relatively small number of free Schiff base ligands have been characterized (Calligaris & Randaccio, 1987). As an extension of our work (Fun, Kargar & Kia 2008; Fun, Kia & Kargar 2008; Fun & Kia 2008a,b) on the structural characterization of Schiff base ligands, the structure of the title compound, (I), is reported here.
The molecule of the title compound (I, Fig 1), lies across a crystallographic inversion centre and adopts E configurations with respect to the C═N bonds. The bond lengths and angles are within normal ranges (Allen et al.,1987). The asymmetric unit of the compound is composed of one-half of the molecule. The imino group is coplanar with the benzene ring. Within the molecule, the planar units are parallel but extend in opposite directions from the methylene bridge. In the crystal structure, neighbouring molecules are linked together by weak intermolecular C—H···N hydrogen bonds involving the cyano N atoms. These form ten-membered rings, generate R22(10) ring motifs (Bernstein et al. 1995) and link the molecules along the c-axis.