organic compounds
7,8,9,10-Tetrahydrocyclohepta[b]indol-6(5H)-one
aDepartment of Chemistry, Bharathiar University, Coimbatore 641 046, Tamilnadu, India, bPG Research Department of Physics, Rajah Serfoji Government College (Autonomous), Thanjavur 613 005, Tamilnadu, India, and cDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA
*Correspondence e-mail: athiru@vsnl.net
In the title molecule, C13H13NO, the dihedral angle between the benzene and pyrrole rings is 1.05 (5)°. The cycloheptene ring adopts a slightly distorted boat conformation. In the intermolecular N—H⋯O hydrogen bonds form centrosymmetric dimers. A C—H⋯π interaction, involving the benzene ring, is also found in the structure.
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell CrysAlis RED (Oxford Diffraction, 2008); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).
Supporting information
10.1107/S160053680802463X/wn2274sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680802463X/wn2274Isup2.hkl
A solution of 2-(2-(4-phenyl)hydrazono)cycloheptanone (0.216 g, 0.001 mol) in a mixture of acetic acid (20 ml) and concentrated hydrochloric acid (5 ml) was refluxed on an oil bath pre-heated to 398–403 K for 2 h. The reaction was monitored by TLC. After the completion of reaction the contents were cooled and poured into ice water with stirring. The separated brown solid was filtered and purified by passing through a column of silica gel and eluting with petroleum ether-ethyl acetate (95:5 v/v) mixture to yield the title compound (0.129 g, 61%). The product thus obtained was recrystallized using ethanol.
The H atom bonded to N5 was located in a difference Fourier map and refined isotropically [N5—H5 = 0.891 (16) Å]. Other H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.95–0.99 Å and Uiso(H) = 1.2Ueq(parent atom).
Data collection: CrysAlis CCD (Oxford Diffraction, 2008); cell
CrysAlis RED (Oxford Diffraction, 2008); data reduction: CrysAlis RED (Oxford Diffraction, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).C13H13NO | F(000) = 424 |
Mr = 199.24 | Dx = 1.327 Mg m−3 |
Monoclinic, P21/c | Melting point: 425(1) K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 14.0914 (4) Å | Cell parameters from 7034 reflections |
b = 8.0883 (2) Å | θ = 5.0–34.8° |
c = 9.2503 (3) Å | µ = 0.08 mm−1 |
β = 108.937 (3)° | T = 200 K |
V = 997.24 (5) Å3 | Chunk, pale-yellow |
Z = 4 | 0.56 × 0.38 × 0.31 mm |
Oxford Diffraction R Gemini diffractometer | 4127 independent reflections |
Radiation source: fine-focus sealed tube | 3036 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
Detector resolution: 10.5081 pixels mm-1 | θmax = 34.9°, θmin = 5.0° |
ϕ and ω scans | h = −22→22 |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008) | k = −12→12 |
Tmin = 0.985, Tmax = 1.000 | l = −11→14 |
15925 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.145 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | w = 1/[σ2(Fo2) + (0.097P)2] where P = (Fo2 + 2Fc2)/3 |
4127 reflections | (Δ/σ)max = 0.001 |
140 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.35 e Å−3 |
C13H13NO | V = 997.24 (5) Å3 |
Mr = 199.24 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.0914 (4) Å | µ = 0.08 mm−1 |
b = 8.0883 (2) Å | T = 200 K |
c = 9.2503 (3) Å | 0.56 × 0.38 × 0.31 mm |
β = 108.937 (3)° |
Oxford Diffraction R Gemini diffractometer | 4127 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008) | 3036 reflections with I > 2σ(I) |
Tmin = 0.985, Tmax = 1.000 | Rint = 0.023 |
15925 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.145 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.31 e Å−3 |
4127 reflections | Δρmin = −0.35 e Å−3 |
140 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O6 | −0.00855 (5) | 0.08244 (11) | 0.30591 (9) | 0.0440 (2) | |
N5 | 0.15340 (5) | −0.04196 (9) | 0.54651 (8) | 0.0256 (2) | |
C1 | 0.42047 (7) | −0.01523 (11) | 0.66953 (11) | 0.0298 (2) | |
C2 | 0.44834 (7) | −0.08626 (12) | 0.81195 (11) | 0.0343 (3) | |
C3 | 0.37614 (7) | −0.14708 (12) | 0.87403 (11) | 0.0332 (3) | |
C4 | 0.27498 (7) | −0.13868 (10) | 0.79473 (10) | 0.0284 (2) | |
C4A | 0.24673 (6) | −0.06767 (10) | 0.64909 (9) | 0.0232 (2) | |
C5A | 0.16322 (6) | 0.03677 (10) | 0.41960 (10) | 0.0242 (2) | |
C6 | 0.07608 (6) | 0.08971 (11) | 0.29509 (10) | 0.0280 (2) | |
C7 | 0.09234 (7) | 0.15126 (12) | 0.15191 (11) | 0.0321 (3) | |
C8 | 0.16098 (8) | 0.03791 (13) | 0.09678 (11) | 0.0349 (3) | |
C9 | 0.27357 (7) | 0.06922 (12) | 0.16778 (11) | 0.0312 (2) | |
C10 | 0.30600 (6) | 0.14407 (11) | 0.32855 (10) | 0.0293 (2) | |
C10A | 0.26382 (6) | 0.05963 (10) | 0.43769 (10) | 0.0235 (2) | |
C10B | 0.31807 (6) | −0.00584 (10) | 0.58454 (10) | 0.0235 (2) | |
H1 | 0.46963 | 0.02683 | 0.62920 | 0.0357* | |
H2 | 0.51753 | −0.09456 | 0.86970 | 0.0412* | |
H3 | 0.39782 | −0.19511 | 0.97311 | 0.0398* | |
H4 | 0.22650 | −0.17934 | 0.83711 | 0.0340* | |
H5 | 0.0970 (11) | −0.0616 (16) | 0.5673 (16) | 0.049 (4)* | |
H7A | 0.02662 | 0.16053 | 0.07022 | 0.0385* | |
H7B | 0.12233 | 0.26314 | 0.17084 | 0.0385* | |
H8A | 0.14277 | 0.04968 | −0.01546 | 0.0419* | |
H8B | 0.14723 | −0.07800 | 0.11811 | 0.0419* | |
H9A | 0.30934 | −0.03693 | 0.17193 | 0.0375* | |
H9B | 0.29503 | 0.14442 | 0.09981 | 0.0375* | |
H10A | 0.28542 | 0.26165 | 0.32052 | 0.0351* | |
H10B | 0.38014 | 0.14072 | 0.37110 | 0.0351* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O6 | 0.0248 (3) | 0.0711 (5) | 0.0371 (4) | 0.0026 (3) | 0.0116 (3) | 0.0130 (4) |
N5 | 0.0247 (3) | 0.0298 (3) | 0.0240 (3) | −0.0015 (3) | 0.0102 (3) | 0.0031 (3) |
C1 | 0.0252 (4) | 0.0355 (4) | 0.0284 (4) | −0.0014 (3) | 0.0084 (3) | −0.0035 (3) |
C2 | 0.0296 (4) | 0.0410 (5) | 0.0283 (4) | 0.0012 (4) | 0.0038 (3) | −0.0013 (4) |
C3 | 0.0391 (5) | 0.0331 (4) | 0.0239 (4) | 0.0006 (3) | 0.0055 (3) | 0.0021 (3) |
C4 | 0.0358 (4) | 0.0266 (4) | 0.0231 (4) | −0.0022 (3) | 0.0101 (3) | 0.0008 (3) |
C4A | 0.0262 (3) | 0.0217 (3) | 0.0224 (4) | −0.0004 (3) | 0.0088 (3) | −0.0016 (3) |
C5A | 0.0252 (4) | 0.0256 (3) | 0.0229 (4) | −0.0003 (3) | 0.0094 (3) | 0.0017 (3) |
C6 | 0.0262 (4) | 0.0316 (4) | 0.0268 (4) | 0.0006 (3) | 0.0096 (3) | 0.0035 (3) |
C7 | 0.0308 (4) | 0.0386 (5) | 0.0270 (4) | 0.0031 (3) | 0.0097 (3) | 0.0091 (3) |
C8 | 0.0370 (5) | 0.0436 (5) | 0.0250 (4) | −0.0005 (4) | 0.0113 (4) | −0.0009 (4) |
C9 | 0.0358 (4) | 0.0367 (4) | 0.0261 (4) | 0.0016 (3) | 0.0168 (3) | 0.0049 (3) |
C10 | 0.0295 (4) | 0.0326 (4) | 0.0289 (4) | −0.0038 (3) | 0.0139 (3) | 0.0023 (3) |
C10A | 0.0257 (4) | 0.0240 (3) | 0.0230 (4) | −0.0010 (3) | 0.0109 (3) | −0.0006 (3) |
C10B | 0.0247 (3) | 0.0238 (3) | 0.0226 (4) | −0.0007 (3) | 0.0087 (3) | −0.0024 (3) |
O6—C6 | 1.2301 (12) | C9—C10 | 1.5316 (13) |
N5—C4A | 1.3650 (11) | C10—C10A | 1.4928 (12) |
N5—C5A | 1.3814 (11) | C10A—C10B | 1.4269 (12) |
N5—H5 | 0.891 (16) | C1—H1 | 0.9500 |
C1—C10B | 1.4035 (14) | C2—H2 | 0.9500 |
C1—C2 | 1.3726 (14) | C3—H3 | 0.9500 |
C2—C3 | 1.4093 (14) | C4—H4 | 0.9500 |
C3—C4 | 1.3770 (14) | C7—H7A | 0.9900 |
C4—C4A | 1.3983 (12) | C7—H7B | 0.9900 |
C4A—C10B | 1.4166 (12) | C8—H8A | 0.9900 |
C5A—C6 | 1.4491 (12) | C8—H8B | 0.9900 |
C5A—C10A | 1.3849 (13) | C9—H9A | 0.9900 |
C6—C7 | 1.5005 (13) | C9—H9B | 0.9900 |
C7—C8 | 1.5350 (15) | C10—H10A | 0.9900 |
C8—C9 | 1.5285 (15) | C10—H10B | 0.9900 |
O6···N5 | 2.8066 (11) | H2···H9Bvii | 2.6000 |
O6···N5i | 2.8188 (11) | H3···C1v | 2.9200 |
O6···H5 | 2.661 (14) | H3···C10Bv | 2.9900 |
O6···H5i | 1.976 (16) | H5···O6 | 2.661 (14) |
N5···O6 | 2.8066 (11) | H5···O6i | 1.976 (16) |
N5···O6i | 2.8188 (11) | H5···H7Bii | 2.5800 |
N5···H7Bii | 2.6300 | H7A···C8vi | 3.0500 |
C2···C2iii | 3.5893 (14) | H7A···H8Bvi | 2.5900 |
C1···H10B | 2.9200 | H7B···C10 | 2.7000 |
C1···H3iv | 2.9200 | H7B···C10A | 3.1000 |
C3···H2iii | 3.0600 | H7B···H10A | 2.2700 |
C4···H8Bv | 3.0400 | H7B···N5viii | 2.6300 |
C4···H9Av | 2.9600 | H7B···C4Aviii | 3.0700 |
C4···H10Aii | 3.0600 | H7B···C5Aviii | 3.0400 |
C4A···H7Bii | 3.0700 | H7B···H5viii | 2.5800 |
C4A···H10Aii | 2.8900 | H8B···C5A | 2.8800 |
C5A···H8B | 2.8800 | H8B···C10A | 3.0900 |
C5A···H7Bii | 3.0400 | H8B···H7Avi | 2.5900 |
C7···H10A | 2.8100 | H8B···C4iv | 3.0400 |
C8···H7Avi | 3.0500 | H9A···C4iv | 2.9600 |
C9···H2vii | 3.0800 | H9B···H2vii | 2.6000 |
C10···H7B | 2.7000 | H9B···C10viii | 3.0800 |
C10···H9Bii | 3.0800 | H9B···C10Aviii | 2.7800 |
C10A···H7B | 3.1000 | H9B···C10Bviii | 2.9500 |
C10A···H8B | 3.0900 | H10A···C7 | 2.8100 |
C10A···H9Bii | 2.7800 | H10A···H7B | 2.2700 |
C10B···H3iv | 2.9900 | H10A···C4viii | 3.0600 |
C10B···H9Bii | 2.9500 | H10A···C4Aviii | 2.8900 |
C10B···H10Aii | 3.0900 | H10A···C10Bviii | 3.0900 |
H1···H10B | 2.4900 | H10B···C1 | 2.9200 |
H1···H10Bvii | 2.5100 | H10B···H1 | 2.4900 |
H2···C3iii | 3.0600 | H10B···H1vii | 2.5100 |
H2···C9vii | 3.0800 | ||
C4A—N5—C5A | 108.75 (7) | C10B—C1—H1 | 121.00 |
C4A—N5—H5 | 123.3 (9) | C1—C2—H2 | 119.00 |
C5A—N5—H5 | 127.5 (9) | C3—C2—H2 | 119.00 |
C2—C1—C10B | 118.83 (9) | C2—C3—H3 | 119.00 |
C1—C2—C3 | 121.18 (9) | C4—C3—H3 | 119.00 |
C2—C3—C4 | 121.68 (9) | C3—C4—H4 | 121.00 |
C3—C4—C4A | 117.09 (9) | C4A—C4—H4 | 121.00 |
N5—C4A—C4 | 129.88 (8) | C6—C7—H7A | 109.00 |
N5—C4A—C10B | 107.98 (7) | C6—C7—H7B | 109.00 |
C4—C4A—C10B | 122.14 (8) | C8—C7—H7A | 109.00 |
N5—C5A—C6 | 121.26 (8) | C8—C7—H7B | 109.00 |
C6—C5A—C10A | 128.81 (8) | H7A—C7—H7B | 108.00 |
N5—C5A—C10A | 109.86 (8) | C7—C8—H8A | 108.00 |
O6—C6—C7 | 121.16 (8) | C7—C8—H8B | 108.00 |
C5A—C6—C7 | 117.83 (8) | C9—C8—H8A | 108.00 |
O6—C6—C5A | 121.00 (8) | C9—C8—H8B | 108.00 |
C6—C7—C8 | 112.85 (8) | H8A—C8—H8B | 107.00 |
C7—C8—C9 | 115.87 (8) | C8—C9—H9A | 109.00 |
C8—C9—C10 | 115.07 (8) | C8—C9—H9B | 108.00 |
C9—C10—C10A | 114.65 (8) | C10—C9—H9A | 109.00 |
C5A—C10A—C10B | 106.06 (8) | C10—C9—H9B | 109.00 |
C10—C10A—C10B | 127.28 (8) | H9A—C9—H9B | 108.00 |
C5A—C10A—C10 | 126.58 (8) | C9—C10—H10A | 109.00 |
C4A—C10B—C10A | 107.34 (8) | C9—C10—H10B | 109.00 |
C1—C10B—C4A | 119.08 (8) | C10A—C10—H10A | 109.00 |
C1—C10B—C10A | 133.56 (8) | C10A—C10—H10B | 109.00 |
C2—C1—H1 | 121.00 | H10A—C10—H10B | 108.00 |
C5A—N5—C4A—C4 | 178.26 (8) | C10A—C5A—C6—O6 | −168.79 (9) |
C5A—N5—C4A—C10B | −0.94 (9) | C10A—C5A—C6—C7 | 12.09 (14) |
C4A—N5—C5A—C6 | −176.03 (8) | N5—C5A—C10A—C10 | −178.13 (8) |
C4A—N5—C5A—C10A | 1.30 (10) | N5—C5A—C10A—C10B | −1.11 (9) |
C2—C1—C10B—C10A | 179.18 (9) | C6—C5A—C10A—C10 | −1.05 (15) |
C2—C1—C10B—C4A | 0.89 (13) | C6—C5A—C10A—C10B | 175.96 (8) |
C10B—C1—C2—C3 | −0.89 (14) | O6—C6—C7—C8 | −132.19 (10) |
C1—C2—C3—C4 | 0.30 (15) | C5A—C6—C7—C8 | 46.93 (11) |
C2—C3—C4—C4A | 0.29 (13) | C6—C7—C8—C9 | −85.91 (11) |
C3—C4—C4A—C10B | −0.27 (12) | C7—C8—C9—C10 | 27.65 (12) |
C3—C4—C4A—N5 | −179.36 (9) | C8—C9—C10—C10A | 48.32 (11) |
N5—C4A—C10B—C1 | 178.95 (8) | C9—C10—C10A—C5A | −57.72 (12) |
C4—C4A—C10B—C10A | −179.02 (8) | C9—C10—C10A—C10B | 125.89 (9) |
N5—C4A—C10B—C10A | 0.25 (9) | C5A—C10A—C10B—C1 | −177.91 (9) |
C4—C4A—C10B—C1 | −0.32 (12) | C5A—C10A—C10B—C4A | 0.53 (9) |
N5—C5A—C6—O6 | 7.99 (13) | C10—C10A—C10B—C1 | −0.92 (16) |
N5—C5A—C6—C7 | −171.13 (8) | C10—C10A—C10B—C4A | 177.51 (8) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z+1/2; (iii) −x+1, −y, −z+2; (iv) x, −y−1/2, z−1/2; (v) x, −y−1/2, z+1/2; (vi) −x, −y, −z; (vii) −x+1, −y, −z+1; (viii) x, −y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···O6i | 0.891 (16) | 1.976 (16) | 2.8188 (11) | 157.3 (13) |
C10—H10A···Cgviii | 0.99 | 2.90 | 3.7087 (10) | 139 |
Symmetry codes: (i) −x, −y, −z+1; (viii) x, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H13NO |
Mr | 199.24 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 200 |
a, b, c (Å) | 14.0914 (4), 8.0883 (2), 9.2503 (3) |
β (°) | 108.937 (3) |
V (Å3) | 997.24 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.56 × 0.38 × 0.31 |
Data collection | |
Diffractometer | Oxford Diffraction R Gemini diffractometer |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2008) |
Tmin, Tmax | 0.985, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15925, 4127, 3036 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.806 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.145, 1.01 |
No. of reflections | 4127 |
No. of parameters | 140 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.35 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2008), CrysAlis RED (Oxford Diffraction, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N5—H5···O6i | 0.891 (16) | 1.976 (16) | 2.8188 (11) | 157.3 (13) |
C10—H10A···Cgii | 0.99 | 2.90 | 3.7087 (10) | 139 |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z−1/2. |
Acknowledgements
MS thanks the UGC, New Delhi, India, for the award of a research fellowship. KJR acknowledges the UGC, New Delhi, India, for the award of Major Research Project Grant No. F.No.31–122/2005. AT thanks the UGC, India, for the award of a Minor Research Project [File No. MRP-2355/06(UGC-SERO), Link No. 2355, 10/01/2007]. RJB acknowledges the NSF-MRI program for funding to purchase the X-ray CCD diffractometer.
References
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Oxford Diffraction (2008). CrysAlis CCD and CrysAlis RED. Oxford Diffraction Ltd, Abingdon, Oxfordshire, England. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sridharan, M., Prasad, K. J. R., Ngendahimana, A. & Zeller, M. (2008). Acta Cryst. E64, o1207. Web of Science CSD CrossRef IUCr Journals Google Scholar
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Sridharan et al. (2008) have reported the crystal structure of 7,8,9,10-tetrahydro-2-methylcyclohepta[b]indol-6(5H)-one, in which the cycloheptene ring adopts a slightly distorted envelope conformation. The molecular structure of the title compound, with atomic numbering scheme, is shown in Fig. 1. The dihedral angle between the benzene ring and the pyrrole ring is 1.05 (5)°. The cycloheptene ring adopts a slightly distorted boat conformation. Intermolecular N5—H5···O6 (-x, -y, 1 - z) hydrogen bonds form centrosymmetric dimers in the crystal structure (Fig. 2). A C—H···π interaction, involving the benzene ring, is also found in the structure.