organic compounds
(Z)-6-{2-[(E)-2,4-Dihydroxybenzylideneamino]phenylaminomethylene}-3-hydroxycyclohexa-2,4-dienone toluene solvate
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bChemistry Department, University of Isfahan, Isfahan 81746-73441, Iran
*Correspondence e-mail: hkfun@usm.my
The bis-Schiff base title compound, C20H16N2O4·C7H8, crystallized as a toluene solvate. In the solid state, it is present as its prototropic tautomer formed by transfer of one of the ortho-hydroxyl H atoms. The proton transfer is accompanied by a shift of electron pairs, as is evident from the observed C—O and C—N bond distances of 1.305 (2) and 1.315 (2) Å, which are largely consistent with C=O and C—N distances. The actual molecule present in the solid state is thus the charge-neutral β-keto amine, with a small contribution of its zwitterionic valence tautomer via partial delocalization of electron pairs along the N—C—C—C—O atom chain. The dihedral angles between the central benzene ring and the two outer benzene rings of the Schiff base are 51.99 (8) and 12.95 (9)°. Intramolecular O—H⋯N and N—H⋯O hydrogen bonds generate S(6) ring motifs, whereas intramolecular N—H⋯N hydrogen bonds generate S(5) ring motifs. In the O—H⋯O hydrogen bonds and weak C—H⋯O interactions link the molecules into one-dimensional zigzag chains along the b axis; these chains are further stacked by O—H⋯O and weak C—H⋯O interactions along the c axis, forming two-dimensional extended networks parallel to the bc plane. In addition, the is further stabilized by weak C—H⋯π and π–π interactions.
Related literature
For bond-length data, see: Allen et al. (1987). For details of hydrogen-bond motifs, see: Bernstein et al. (1995). For related structures, see, for example: Cakir et al. (2002); Eltayeb et al. (2007a,b); Karabiyik et al. (2007); Fun, Kargar & Kia (2008); Fun, Kia & Kargar (2008); Fun, Mirkhani et al. (2008a,b). For background on applications of Schiff base ligands, see, for example: Hajioudis et al. (1987); Granovski et al. (1993); Dao et al. (2000); Shahrokhian et al. (2000); Eltayeb & Ahmed (2005a,b); Fakhari et al. (2005); Karthikeyan et al. (2006); Sriram et al. (2006). For related literature, see: Fun & Kia (2008).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808026305/zl2135sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808026305/zl2135Isup2.hkl
The title compound was synthesized by adding 2,4-dihydroxybenzaldehyde (0.552 g, 4 mmol) to a solution of o-phenylenediamine (0.216 g, 2 mmol) in ethanol (20 ml). The mixture was refluxed with stirring for half an hour. The resultant yellow solution was filtered. Yellow single crystals of the title compound suitable for X-ray
were recrystallized from a mixture of THF/toluene (2/1) by slow evaporation of the solvents at room temperature over several days.Hydroxyl and amine/imine H atoms were located from the difference Fourier map and refined as riding on the parent atoms with isotropic
of the displacement parameters. The remaining H atoms were geometrically located and refined as riding model. A rotating group model was used for the methyl groups.Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).Fig. 1. The asymmetric unit of (I), showing 50% probability displacement ellipsoids and the atomic numbering. Intramolecular hydrogen bonds are drawn as dashed lines. | |
Fig. 2. The crystal packing of (I), viewed down the c axis, showing the molecular chains along the b axis and stacking of these chains along the c-axis. Hydrogen bonds are drawn as dashed lines. The toluene molecules were omitted for clarity. | |
Fig. 3. The crystal packing of (I), showing 1-D extended chains along the c axis. The toluene molecules were omitted for clarity. | |
Fig. 4. The charge neutral β-keto amine (main component) form and the valence tautomer via partial delocalization of electron pairs along the N—C—C—C—O atom chain (small contribution) in the title compound. |
C20H16N2O4·C7H8 | F(000) = 928 |
Mr = 440.48 | Dx = 1.380 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5653 reflections |
a = 11.9753 (3) Å | θ = 2.4–29.6° |
b = 18.8539 (5) Å | µ = 0.09 mm−1 |
c = 9.9240 (2) Å | T = 100 K |
β = 108.819 (1)° | Plate, yellow |
V = 2120.87 (9) Å3 | 0.25 × 0.13 × 0.02 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 6233 independent reflections |
Radiation source: fine-focus sealed tube | 4023 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
ϕ and ω scans | θmax = 30.2°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −14→16 |
Tmin = 0.954, Tmax = 0.994 | k = −20→26 |
24830 measured reflections | l = −13→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.058 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.163 | H-atom parameters constrained |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0708P)2 + 0.4015P] where P = (Fo2 + 2Fc2)/3 |
6233 reflections | (Δ/σ)max < 0.001 |
299 parameters | Δρmax = 0.76 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
C20H16N2O4·C7H8 | V = 2120.87 (9) Å3 |
Mr = 440.48 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.9753 (3) Å | µ = 0.09 mm−1 |
b = 18.8539 (5) Å | T = 100 K |
c = 9.9240 (2) Å | 0.25 × 0.13 × 0.02 mm |
β = 108.819 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 6233 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4023 reflections with I > 2σ(I) |
Tmin = 0.954, Tmax = 0.994 | Rint = 0.039 |
24830 measured reflections |
R[F2 > 2σ(F2)] = 0.058 | 0 restraints |
wR(F2) = 0.163 | H-atom parameters constrained |
S = 1.11 | Δρmax = 0.76 e Å−3 |
6233 reflections | Δρmin = −0.32 e Å−3 |
299 parameters |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.18268 (12) | 0.42566 (7) | 0.14400 (14) | 0.0168 (3) | |
O3 | 0.50774 (11) | 0.63459 (6) | 0.61784 (12) | 0.0214 (3) | |
H1O3 | 0.5724 | 0.6608 | 0.6044 | 0.032* | |
O1 | 0.23309 (11) | 0.45373 (6) | 0.41957 (12) | 0.0225 (3) | |
H1O1 | 0.2053 | 0.4270 | 0.3349 | 0.034* | |
O4 | 0.48126 (11) | 0.07727 (6) | 0.62444 (12) | 0.0217 (3) | |
H1O4 | 0.4999 | 0.0995 | 0.7096 | 0.033* | |
O2 | 0.31282 (10) | 0.29118 (6) | 0.39178 (12) | 0.0187 (3) | |
N2 | 0.17826 (12) | 0.28136 (7) | 0.12862 (14) | 0.0170 (3) | |
H1N2 | 0.2152 | 0.3043 | 0.2079 | 0.025* | |
C8 | 0.11363 (14) | 0.39346 (9) | 0.01527 (17) | 0.0165 (3) | |
C6 | 0.31241 (14) | 0.51993 (9) | 0.26313 (17) | 0.0161 (3) | |
C15 | 0.27803 (14) | 0.18211 (9) | 0.26242 (17) | 0.0165 (3) | |
C13 | 0.10818 (14) | 0.31889 (9) | 0.00863 (17) | 0.0164 (3) | |
C16 | 0.30131 (15) | 0.10819 (9) | 0.26262 (18) | 0.0194 (4) | |
H16A | 0.2684 | 0.0818 | 0.1775 | 0.023* | |
C7 | 0.24537 (14) | 0.48061 (9) | 0.13868 (17) | 0.0165 (3) | |
H7A | 0.2475 | 0.4959 | 0.0483 | 0.020* | |
C9 | 0.04597 (15) | 0.43207 (9) | −0.10182 (17) | 0.0193 (4) | |
H9A | 0.0487 | 0.4824 | −0.0988 | 0.023* | |
C19 | 0.39752 (15) | 0.18616 (9) | 0.51268 (17) | 0.0177 (3) | |
H19A | 0.4305 | 0.2113 | 0.5994 | 0.021* | |
C5 | 0.38949 (15) | 0.57342 (8) | 0.25065 (17) | 0.0176 (4) | |
H5A | 0.3961 | 0.5834 | 0.1597 | 0.021* | |
C1 | 0.30495 (14) | 0.50578 (8) | 0.39969 (17) | 0.0163 (3) | |
C17 | 0.36973 (15) | 0.07431 (9) | 0.38208 (18) | 0.0198 (4) | |
H17A | 0.3853 | 0.0250 | 0.3804 | 0.024* | |
C18 | 0.41709 (15) | 0.11407 (9) | 0.50847 (17) | 0.0176 (3) | |
C2 | 0.36978 (14) | 0.54490 (9) | 0.51645 (17) | 0.0175 (4) | |
H2A | 0.3627 | 0.5358 | 0.6075 | 0.021* | |
C12 | 0.03656 (15) | 0.28533 (9) | −0.11326 (17) | 0.0204 (4) | |
H12A | 0.0333 | 0.2350 | −0.1173 | 0.024* | |
C20 | 0.32949 (14) | 0.22283 (9) | 0.39033 (17) | 0.0164 (3) | |
C4 | 0.45602 (15) | 0.61205 (9) | 0.36648 (17) | 0.0185 (4) | |
H4A | 0.5083 | 0.6479 | 0.3559 | 0.022* | |
C14 | 0.20597 (15) | 0.21362 (9) | 0.13726 (17) | 0.0176 (4) | |
H14A | 0.1756 | 0.1849 | 0.0548 | 0.021* | |
C10 | −0.02551 (15) | 0.39818 (10) | −0.22315 (18) | 0.0225 (4) | |
H10A | −0.0714 | 0.4253 | −0.3024 | 0.027* | |
C3 | 0.44526 (14) | 0.59760 (9) | 0.49988 (17) | 0.0168 (3) | |
C11 | −0.02984 (15) | 0.32460 (10) | −0.22838 (18) | 0.0231 (4) | |
H11A | −0.0786 | 0.3013 | −0.3114 | 0.028* | |
C23 | 0.30310 (18) | 0.71109 (11) | 0.7808 (2) | 0.0329 (5) | |
H23A | 0.3583 | 0.7384 | 0.7523 | 0.040* | |
C25 | 0.2145 (2) | 0.67854 (11) | 0.9559 (2) | 0.0352 (5) | |
H25A | 0.2093 | 0.6830 | 1.0490 | 0.042* | |
C26 | 0.13983 (19) | 0.63297 (10) | 0.8595 (2) | 0.0314 (5) | |
H26A | 0.0822 | 0.6073 | 0.8867 | 0.038* | |
C22 | 0.22868 (18) | 0.66449 (10) | 0.6864 (2) | 0.0293 (4) | |
H22A | 0.2339 | 0.6604 | 0.5932 | 0.035* | |
C21 | 0.14696 (17) | 0.62366 (10) | 0.7224 (2) | 0.0292 (4) | |
C24 | 0.29687 (18) | 0.71778 (11) | 0.9173 (2) | 0.0350 (5) | |
H24A | 0.3487 | 0.7490 | 0.9837 | 0.042* | |
C27 | 0.0688 (2) | 0.57353 (12) | 0.6196 (2) | 0.0402 (5) | |
H27A | 0.1166 | 0.5365 | 0.5954 | 0.060* | |
H27B | 0.0242 | 0.5992 | 0.5331 | 0.060* | |
H27C | 0.0139 | 0.5517 | 0.6622 | 0.060* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0194 (7) | 0.0153 (7) | 0.0144 (7) | 0.0009 (6) | 0.0036 (6) | −0.0015 (5) |
O3 | 0.0251 (7) | 0.0191 (6) | 0.0189 (6) | −0.0058 (5) | 0.0056 (5) | −0.0025 (5) |
O1 | 0.0294 (7) | 0.0215 (7) | 0.0167 (6) | −0.0103 (5) | 0.0076 (5) | −0.0025 (5) |
O4 | 0.0273 (7) | 0.0183 (6) | 0.0174 (6) | 0.0051 (5) | 0.0043 (5) | 0.0029 (5) |
O2 | 0.0224 (6) | 0.0131 (6) | 0.0187 (6) | −0.0011 (5) | 0.0039 (5) | −0.0009 (5) |
N2 | 0.0183 (7) | 0.0169 (7) | 0.0137 (7) | −0.0029 (6) | 0.0025 (6) | −0.0007 (5) |
C8 | 0.0163 (8) | 0.0201 (9) | 0.0131 (8) | −0.0010 (7) | 0.0048 (6) | −0.0024 (6) |
C6 | 0.0180 (8) | 0.0144 (8) | 0.0150 (8) | 0.0017 (6) | 0.0040 (6) | −0.0004 (6) |
C15 | 0.0189 (8) | 0.0162 (8) | 0.0163 (8) | −0.0011 (7) | 0.0082 (7) | −0.0006 (6) |
C13 | 0.0152 (8) | 0.0170 (8) | 0.0172 (8) | 0.0002 (6) | 0.0053 (7) | 0.0015 (6) |
C16 | 0.0261 (9) | 0.0173 (9) | 0.0168 (8) | −0.0008 (7) | 0.0099 (7) | −0.0025 (7) |
C7 | 0.0188 (8) | 0.0165 (8) | 0.0139 (8) | 0.0033 (7) | 0.0047 (7) | 0.0005 (6) |
C9 | 0.0218 (9) | 0.0181 (9) | 0.0169 (8) | 0.0033 (7) | 0.0047 (7) | 0.0013 (7) |
C19 | 0.0196 (8) | 0.0176 (9) | 0.0151 (8) | −0.0014 (7) | 0.0044 (7) | −0.0009 (6) |
C5 | 0.0212 (9) | 0.0157 (8) | 0.0168 (8) | 0.0027 (7) | 0.0073 (7) | 0.0031 (6) |
C1 | 0.0180 (8) | 0.0133 (8) | 0.0174 (8) | 0.0012 (6) | 0.0055 (7) | 0.0008 (6) |
C17 | 0.0259 (9) | 0.0148 (8) | 0.0214 (9) | 0.0022 (7) | 0.0115 (7) | 0.0005 (7) |
C18 | 0.0179 (8) | 0.0186 (9) | 0.0177 (8) | 0.0022 (7) | 0.0077 (7) | 0.0034 (7) |
C2 | 0.0206 (9) | 0.0162 (8) | 0.0156 (8) | 0.0005 (7) | 0.0059 (7) | −0.0002 (6) |
C12 | 0.0195 (9) | 0.0194 (9) | 0.0205 (9) | −0.0045 (7) | 0.0041 (7) | −0.0035 (7) |
C20 | 0.0163 (8) | 0.0161 (8) | 0.0182 (8) | −0.0010 (6) | 0.0074 (7) | 0.0003 (6) |
C4 | 0.0202 (9) | 0.0143 (8) | 0.0207 (9) | −0.0003 (7) | 0.0062 (7) | 0.0011 (7) |
C14 | 0.0214 (9) | 0.0156 (8) | 0.0167 (8) | −0.0025 (7) | 0.0074 (7) | −0.0007 (6) |
C10 | 0.0197 (9) | 0.0285 (10) | 0.0159 (8) | 0.0037 (7) | 0.0012 (7) | 0.0014 (7) |
C3 | 0.0179 (8) | 0.0142 (8) | 0.0164 (8) | 0.0008 (6) | 0.0028 (7) | −0.0034 (6) |
C11 | 0.0197 (9) | 0.0291 (10) | 0.0168 (9) | −0.0014 (8) | 0.0009 (7) | −0.0037 (7) |
C23 | 0.0296 (11) | 0.0343 (12) | 0.0362 (12) | 0.0008 (9) | 0.0124 (9) | 0.0017 (9) |
C25 | 0.0458 (13) | 0.0309 (11) | 0.0313 (11) | 0.0098 (10) | 0.0158 (10) | 0.0044 (9) |
C26 | 0.0341 (11) | 0.0258 (11) | 0.0402 (12) | 0.0053 (9) | 0.0201 (10) | 0.0106 (9) |
C22 | 0.0307 (11) | 0.0280 (10) | 0.0316 (11) | 0.0033 (9) | 0.0134 (9) | 0.0029 (8) |
C21 | 0.0292 (10) | 0.0275 (10) | 0.0311 (11) | 0.0057 (8) | 0.0101 (9) | 0.0055 (8) |
C24 | 0.0330 (11) | 0.0363 (12) | 0.0336 (11) | 0.0063 (9) | 0.0076 (9) | −0.0001 (9) |
C27 | 0.0429 (13) | 0.0380 (13) | 0.0415 (13) | −0.0042 (10) | 0.0161 (11) | 0.0008 (10) |
N1—C7 | 1.290 (2) | C5—H5A | 0.9500 |
N1—C8 | 1.415 (2) | C1—C2 | 1.382 (2) |
O3—C3 | 1.3608 (19) | C17—C18 | 1.413 (2) |
O3—H1O3 | 0.9628 | C17—H17A | 0.9500 |
O1—C1 | 1.3608 (19) | C2—C3 | 1.388 (2) |
O1—H1O1 | 0.9431 | C2—H2A | 0.9500 |
O4—C18 | 1.3513 (19) | C12—C11 | 1.378 (2) |
O4—H1O4 | 0.9048 | C12—H12A | 0.9500 |
O2—C20 | 1.3048 (19) | C4—C3 | 1.398 (2) |
N2—C14 | 1.315 (2) | C4—H4A | 0.9500 |
N2—C13 | 1.406 (2) | C14—H14A | 0.9500 |
N2—H1N2 | 0.8816 | C10—C11 | 1.389 (3) |
C8—C9 | 1.389 (2) | C10—H10A | 0.9500 |
C8—C13 | 1.408 (2) | C11—H11A | 0.9500 |
C6—C5 | 1.399 (2) | C23—C22 | 1.380 (3) |
C6—C1 | 1.412 (2) | C23—C24 | 1.387 (3) |
C6—C7 | 1.442 (2) | C23—H23A | 0.9500 |
C15—C14 | 1.396 (2) | C25—C26 | 1.379 (3) |
C15—C16 | 1.421 (2) | C25—C24 | 1.382 (3) |
C15—C20 | 1.441 (2) | C25—H25A | 0.9500 |
C13—C12 | 1.389 (2) | C26—C21 | 1.402 (3) |
C16—C17 | 1.363 (2) | C26—H26A | 0.9500 |
C16—H16A | 0.9500 | C22—C21 | 1.380 (3) |
C7—H7A | 0.9500 | C22—H22A | 0.9500 |
C9—C10 | 1.388 (2) | C21—C27 | 1.482 (3) |
C9—H9A | 0.9500 | C24—H24A | 0.9500 |
C19—C18 | 1.382 (2) | C27—H27A | 0.9800 |
C19—C20 | 1.406 (2) | C27—H27B | 0.9800 |
C19—H19A | 0.9500 | C27—H27C | 0.9800 |
C5—C4 | 1.377 (2) | ||
Cg1···Cg1i | 3.7867 (1) | Cg2···Cg3ii | 4.5626 (3) |
C7—N1—C8 | 119.05 (14) | C11—C12—C13 | 120.40 (16) |
C3—O3—H1O3 | 112.8 | C11—C12—H12A | 119.8 |
C1—O1—H1O1 | 108.3 | C13—C12—H12A | 119.8 |
C18—O4—H1O4 | 117.3 | O2—C20—C19 | 121.60 (15) |
C14—N2—C13 | 127.78 (14) | O2—C20—C15 | 120.84 (15) |
C14—N2—H1N2 | 112.0 | C19—C20—C15 | 117.56 (15) |
C13—N2—H1N2 | 120.0 | C5—C4—C3 | 118.85 (15) |
C9—C8—C13 | 118.59 (15) | C5—C4—H4A | 120.6 |
C9—C8—N1 | 122.94 (15) | C3—C4—H4A | 120.6 |
C13—C8—N1 | 118.38 (14) | N2—C14—C15 | 122.80 (15) |
C5—C6—C1 | 117.97 (15) | N2—C14—H14A | 118.6 |
C5—C6—C7 | 119.71 (14) | C15—C14—H14A | 118.6 |
C1—C6—C7 | 122.32 (15) | C9—C10—C11 | 119.84 (16) |
C14—C15—C16 | 118.90 (15) | C9—C10—H10A | 120.1 |
C14—C15—C20 | 121.53 (15) | C11—C10—H10A | 120.1 |
C16—C15—C20 | 119.57 (15) | O3—C3—C2 | 117.60 (14) |
C12—C13—N2 | 122.70 (15) | O3—C3—C4 | 121.45 (15) |
C12—C13—C8 | 120.12 (15) | C2—C3—C4 | 120.95 (15) |
N2—C13—C8 | 117.18 (14) | C12—C11—C10 | 120.08 (16) |
C17—C16—C15 | 121.56 (15) | C12—C11—H11A | 120.0 |
C17—C16—H16A | 119.2 | C10—C11—H11A | 120.0 |
C15—C16—H16A | 119.2 | C22—C23—C24 | 119.6 (2) |
N1—C7—C6 | 123.24 (15) | C22—C23—H23A | 120.2 |
N1—C7—H7A | 118.4 | C24—C23—H23A | 120.2 |
C6—C7—H7A | 118.4 | C26—C25—C24 | 120.16 (19) |
C10—C9—C8 | 120.97 (16) | C26—C25—H25A | 119.9 |
C10—C9—H9A | 119.5 | C24—C25—H25A | 119.9 |
C8—C9—H9A | 119.5 | C25—C26—C21 | 121.50 (19) |
C18—C19—C20 | 120.93 (15) | C25—C26—H26A | 119.3 |
C18—C19—H19A | 119.5 | C21—C26—H26A | 119.3 |
C20—C19—H19A | 119.5 | C21—C22—C23 | 122.41 (19) |
C4—C5—C6 | 121.86 (15) | C21—C22—H22A | 118.8 |
C4—C5—H5A | 119.1 | C23—C22—H22A | 118.8 |
C6—C5—H5A | 119.1 | C22—C21—C26 | 116.88 (19) |
O1—C1—C2 | 118.28 (14) | C22—C21—C27 | 121.39 (18) |
O1—C1—C6 | 120.95 (14) | C26—C21—C27 | 121.72 (19) |
C2—C1—C6 | 120.77 (15) | C25—C24—C23 | 119.4 (2) |
C16—C17—C18 | 118.67 (16) | C25—C24—H24A | 120.3 |
C16—C17—H17A | 120.7 | C23—C24—H24A | 120.3 |
C18—C17—H17A | 120.7 | C21—C27—H27A | 109.5 |
O4—C18—C19 | 122.31 (15) | C21—C27—H27B | 109.5 |
O4—C18—C17 | 116.02 (15) | H27A—C27—H27B | 109.5 |
C19—C18—C17 | 121.66 (15) | C21—C27—H27C | 109.5 |
C1—C2—C3 | 119.59 (15) | H27A—C27—H27C | 109.5 |
C1—C2—H2A | 120.2 | H27B—C27—H27C | 109.5 |
C3—C2—H2A | 120.2 | ||
C7—N1—C8—C9 | −43.9 (2) | N2—C13—C12—C11 | −179.57 (15) |
C7—N1—C8—C13 | 139.83 (16) | C8—C13—C12—C11 | −0.2 (2) |
C14—N2—C13—C12 | 14.2 (3) | C18—C19—C20—O2 | −178.20 (15) |
C14—N2—C13—C8 | −165.19 (16) | C18—C19—C20—C15 | 2.0 (2) |
C9—C8—C13—C12 | 0.2 (2) | C14—C15—C20—O2 | −2.0 (2) |
N1—C8—C13—C12 | 176.67 (14) | C16—C15—C20—O2 | 177.67 (15) |
C9—C8—C13—N2 | 179.64 (14) | C14—C15—C20—C19 | 177.82 (15) |
N1—C8—C13—N2 | −3.9 (2) | C16—C15—C20—C19 | −2.5 (2) |
C14—C15—C16—C17 | −179.13 (15) | C6—C5—C4—C3 | −0.5 (2) |
C20—C15—C16—C17 | 1.2 (2) | C13—N2—C14—C15 | 179.10 (15) |
C8—N1—C7—C6 | 175.76 (15) | C16—C15—C14—N2 | 178.73 (15) |
C5—C6—C7—N1 | 172.13 (15) | C20—C15—C14—N2 | −1.6 (2) |
C1—C6—C7—N1 | −6.8 (3) | C8—C9—C10—C11 | −0.1 (3) |
C13—C8—C9—C10 | −0.1 (2) | C1—C2—C3—O3 | −179.73 (14) |
N1—C8—C9—C10 | −176.39 (15) | C1—C2—C3—C4 | 0.5 (2) |
C1—C6—C5—C4 | −0.5 (2) | C5—C4—C3—O3 | −179.24 (15) |
C7—C6—C5—C4 | −179.50 (15) | C5—C4—C3—C2 | 0.5 (2) |
C5—C6—C1—O1 | −178.99 (14) | C13—C12—C11—C10 | 0.0 (3) |
C7—C6—C1—O1 | 0.0 (2) | C9—C10—C11—C12 | 0.1 (3) |
C5—C6—C1—C2 | 1.6 (2) | C24—C25—C26—C21 | 1.7 (3) |
C7—C6—C1—C2 | −179.48 (15) | C24—C23—C22—C21 | 0.1 (3) |
C15—C16—C17—C18 | 0.7 (2) | C23—C22—C21—C26 | 1.9 (3) |
C20—C19—C18—O4 | −179.47 (15) | C23—C22—C21—C27 | −179.43 (19) |
C20—C19—C18—C17 | −0.1 (2) | C25—C26—C21—C22 | −2.7 (3) |
C16—C17—C18—O4 | 178.10 (14) | C25—C26—C21—C27 | 178.57 (19) |
C16—C17—C18—C19 | −1.3 (2) | C26—C25—C24—C23 | 0.4 (3) |
O1—C1—C2—C3 | 178.99 (15) | C22—C23—C24—C25 | −1.2 (3) |
C6—C1—C2—C3 | −1.6 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y−1/2, z−3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···N1 | 0.94 | 1.83 | 2.6568 (17) | 145 |
O3—H1O3···O2i | 0.96 | 1.64 | 2.5919 (18) | 171 |
O4—H1O4···O3iii | 0.90 | 1.87 | 2.7403 (16) | 162 |
N2—H1N2···O2 | 0.88 | 1.84 | 2.5954 (18) | 143 |
N2—H1N2···N1 | 0.88 | 2.37 | 2.7245 (19) | 104 |
C16—H16A···O1iv | 0.95 | 2.55 | 3.439 (2) | 157 |
C17—H17A···O4v | 0.95 | 2.51 | 3.381 (2) | 152 |
C11—H11A···Cg4vi | 0.95 | 2.97 | 3.619 (2) | 126 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (iii) −x+1, y−1/2, −z+3/2; (iv) x, −y+1/2, z−1/2; (v) −x+1, −y, −z+1; (vi) −x, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H16N2O4·C7H8 |
Mr | 440.48 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 11.9753 (3), 18.8539 (5), 9.9240 (2) |
β (°) | 108.819 (1) |
V (Å3) | 2120.87 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.25 × 0.13 × 0.02 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.954, 0.994 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 24830, 6233, 4023 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.707 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.058, 0.163, 1.11 |
No. of reflections | 6233 |
No. of parameters | 299 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.76, −0.32 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
Cg1···Cg1i | 3.7867 (1) | Cg2···Cg3ii | 4.5626 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x, −y−1/2, z−3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1O1···N1 | 0.9400 | 1.8300 | 2.6568 (17) | 145.00 |
O3—H1O3···O2i | 0.9600 | 1.6400 | 2.5919 (18) | 171.00 |
O4—H1O4···O3iii | 0.9000 | 1.8700 | 2.7403 (16) | 162.00 |
N2—H1N2···O2 | 0.8800 | 1.8400 | 2.5954 (18) | 143.00 |
N2—H1N2···N1 | 0.8800 | 2.3700 | 2.7245 (19) | 104.00 |
C16—H16A···O1iv | 0.9500 | 2.5500 | 3.439 (2) | 157.00 |
C17—H17A···O4v | 0.9500 | 2.5100 | 3.381 (2) | 152.00 |
C11—H11A···Cg4vi | 0.9500 | 2.9700 | 3.619 (2) | 126.00 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (iii) −x+1, y−1/2, −z+3/2; (iv) x, −y+1/2, z−1/2; (v) −x+1, −y, −z+1; (vi) −x, y−1/2, −z+1/2. |
Acknowledgements
HKF and RK thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/613312. RK thanks Universiti Sains Malaysia for a post-doctoral research fellowship. VM and HZ thank the University of Isfahan for financial support.
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Schiff bases have received much attention because of their potential applications with some of these compounds exhibiting various pharmacological activities, as noted by their anticancer (Dao et al., 2000), anti-HIV (Sriram et al., 2006), antibacterial and antifungal (Karthikeyan et al., 2006) properties. Although numerous transition-metal complexes of Schiff bases have been structurally characterized (Granovski et al., 1993), relatively few free Schiff bases have been similarly characterized. N-substituted salicylaldimines show photochromism and thermochromism in the solid state. These effects are produced by intramolecular proton transfer associated with a change in the π-electron configuration (Hajioudis et al. 1987). In addition, some of them may be used as analytical reagents for the determination of trace elements (Eltayeb & Ahmed, 2005a,b) such as nickel in some natural food products (Fakhari et al., 2005) or biologically important species (Shahrokhian et al., 2000). As part of a general study of tetradenate and bidentate Schiff bases (Fun, Kargar & Kia 2008; Fun, Kia & Kargar 2008; Fun, Mirkhani et al., 2008a,b), we determined the structure of the title compound.
The title compound was synthesized from o-phenylenediamine by reaction with two equivalents of 2,4-dihydroxybenzaldehyde, and the expected reaction product would thus have been the bis-Schiff base 4-((E)-(2-((E)-2-hydroxybenzylideneamino)phenylimino)methyl) benzene-1,3-diol. The actual molecule obtained in the solid state is however its prototropic tautomer formed by transfer of one of the ortho-hydroxyl protons onto the adjacent imine unit. The proton transfer is accompanied by a shift of electron pairs as is evident from the observed C20–O2 and C14–N2 bond distances of 1.305 (2) and 1.315 (2) Å, which are consistent with C═O and C—N distances (Allen et al., 1987), respectively. The formation of a C═O keto group rather than a C-O- phenolate is also obvious by comparison with the other three phenol C-OH groups in the structure, which are about 0.05 Å longer than C20—O2. The actual molecule present in the solid state is thus the charge neutral β-keto amine (Z)-3-hydroxy-6-((2-((E)-2- hydroxybenzylideneamino)phenylamino)methylene)cyclohexa-2,4-dienone (top isomer in Fig. 4), with a small contribution of its zwitter-ionic valence tautomer via partial delocalization of electron pairs along the atom chain N2—C14—C15—C20—O2 (bottom tautomer in Fig. 4). The other imine group did not undergo proton transfer and is present in its original Shiff base state. Both the imine as well as the amine units are stabilized by strong O—H···N and N—H···O hydrogen bonds (Table 2) that generate S(6) ring motifs whereas the intramolecular N—H···N hydrogen bond between the amine and imine (Table 2) exhibits an S(5) ring motif (Bernstein et al., 1995). Bond lengths and angles are in normal ranges (Allen et al., 1987) and comparable to those in related structures (Eltayeb et al., 2007a,b; Cakir et al. 2002; Karabiyik et al., 2007). The C8–C13 phenyl ring makes a dihedral angle of 51.99 (8)° with the dihydroxyphenyl ring (C1–C6/O1/O3) and 12.95 (9)° with the keto-hydroxyphenyl ring (C15–C20/O2/O4). In the crystal packing (Fig. 2), additional O—H···O hydrogen bonds and weak C—H···O interactions (Table 2) link the molecules into one dimensional zigzag extended chains along the b axis and these chains are further stacked (Fig. 2 & 3) along the c axis thus forming two-dimensional extended networks parallel to the bc plane. The crystal is further stabilized by weak C—H···π interactions (Table 2). The short distance between the centroids of the six-membered rings prove an existence of π···π interactions (Table 1).