metal-organic compounds
fac-Bis(acetonitrile-κN)tricarbonyl(trifluoroacetato-κO)rhenium(I)
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title compound, [Re(CF3COO)(CH3CN)2(CO)3], the Re atom has a distorted octahedral configuration. The two acetonitrile molecules and two of the three carbonyl groups occupy the equatorial plane of the complex, with the third carbonyl ligand and the trifluoroacetato ligand in the axial positions. The three carbonyl ligands are arranged in a fac configuration around the Re atom. The CF3 segment of the trifluoroacetato ligand shows rotational disorder and the refined site-occupancy factors of the disordered parts are ca 0.5/0.5. The is stabilized by C—H⋯O and C—H⋯F hydrogen bonds.
Related literature
For values of standard bond lengths, see: Allen et al. (1987). For related structures, see, for example: Chan et al. (1977); Lazarova et al. (2004). For background on the applications, see, for example: Davies & Hartely (1981); Collin & Sauvage (1989); Balzani et al. (1996); Meyer (1989).
Experimental
Crystal data
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Refinement
|
Data collection: APEX2 (Bruker, 2005); cell APEX2; data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808029966/at2632sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808029966/at2632Isup2.hkl
The synthetic method has been described earlier (Chan et al., 1977). Single crystals suitable for X-ray diffraction were obtained by evaporation of an acetonitrile solution at room temperature.
The hydrogen atoms of the methyl groups were first located from the difference Fourier map and then constrained to refine using a rotating-group model. The CF3 segment of the trifluoroacete ligand has rotational disorder and the refined site-occupancy factores of the disorder parts are 0.501 (2)/0.499 (2). The highest peak (2.80 eÅ-3) is located 0.61 Å from Re1 and the deepest hole (-1.27 eÅ-3) is located 1.01 Å from Re1.
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).[Re(C2F3O2)(C2H3N)2(CO)3] | F(000) = 864 |
Mr = 465.36 | Dx = 2.316 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9896 reflections |
a = 10.8243 (2) Å | θ = 2.6–40.1° |
b = 10.4745 (2) Å | µ = 9.16 mm−1 |
c = 14.4772 (3) Å | T = 100 K |
β = 125.584 (1)° | Block, colourless |
V = 1334.90 (4) Å3 | 0.32 × 0.23 × 0.19 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 5819 independent reflections |
Radiation source: fine-focus sealed tube | 5087 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.037 |
ϕ and ω scans | θmax = 35.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −17→14 |
Tmin = 0.098, Tmax = 0.175 | k = −10→16 |
24096 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0375P)2 + 1.8212P] where P = (Fo2 + 2Fc2)/3 |
5819 reflections | (Δ/σ)max = 0.002 |
211 parameters | Δρmax = 2.80 e Å−3 |
0 restraints | Δρmin = −1.27 e Å−3 |
[Re(C2F3O2)(C2H3N)2(CO)3] | V = 1334.90 (4) Å3 |
Mr = 465.36 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.8243 (2) Å | µ = 9.16 mm−1 |
b = 10.4745 (2) Å | T = 100 K |
c = 14.4772 (3) Å | 0.32 × 0.23 × 0.19 mm |
β = 125.584 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 5819 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 5087 reflections with I > 2σ(I) |
Tmin = 0.098, Tmax = 0.175 | Rint = 0.037 |
24096 measured reflections |
R[F2 > 2σ(F2)] = 0.031 | 0 restraints |
wR(F2) = 0.078 | H-atom parameters constrained |
S = 1.06 | Δρmax = 2.80 e Å−3 |
5819 reflections | Δρmin = −1.27 e Å−3 |
211 parameters |
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Re1 | 0.681282 (13) | −0.021815 (12) | 0.800806 (9) | 0.02552 (4) | |
F1A | 0.9350 (14) | 0.2534 (7) | 1.1194 (5) | 0.073 (4) | 0.501 (19) |
F2A | 0.7397 (8) | 0.3650 (13) | 1.0179 (9) | 0.075 (4) | 0.501 (19) |
F3A | 0.938 (2) | 0.4097 (12) | 1.0310 (12) | 0.101 (6) | 0.501 (19) |
F1B | 0.818 (2) | 0.2830 (10) | 1.0906 (11) | 0.096 (7) | 0.499 (19) |
F2B | 0.7687 (18) | 0.4304 (11) | 0.9808 (9) | 0.104 (6) | 0.499 (19) |
F3B | 0.9837 (11) | 0.358 (2) | 1.0782 (13) | 0.121 (8) | 0.499 (19) |
O1 | 0.9541 (3) | 0.0126 (3) | 0.7902 (3) | 0.0368 (5) | |
O2 | 0.5020 (4) | 0.1538 (3) | 0.5934 (2) | 0.0477 (7) | |
O3 | 0.5809 (4) | −0.2505 (3) | 0.6407 (3) | 0.0461 (6) | |
O4 | 0.7533 (3) | 0.1237 (2) | 0.9276 (2) | 0.0308 (4) | |
O5 | 0.8149 (4) | 0.2725 (3) | 0.8489 (2) | 0.0425 (6) | |
N1 | 0.7910 (3) | −0.1433 (3) | 0.9467 (2) | 0.0307 (5) | |
N2 | 0.4997 (4) | −0.0360 (3) | 0.8190 (3) | 0.0338 (6) | |
C1 | 0.8537 (4) | −0.0010 (3) | 0.7956 (3) | 0.0284 (5) | |
C2 | 0.5700 (4) | 0.0891 (4) | 0.6720 (3) | 0.0353 (7) | |
C3 | 0.6165 (4) | −0.1638 (4) | 0.7004 (3) | 0.0339 (6) | |
C4 | 0.2941 (6) | −0.0491 (6) | 0.8572 (5) | 0.0620 (15) | |
H4A | 0.3436 | −0.0624 | 0.9386 | 0.093* | |
H4B | 0.2247 | −0.1201 | 0.8144 | 0.093* | |
H4C | 0.2368 | 0.0311 | 0.8336 | 0.093* | |
C5 | 0.4088 (5) | −0.0429 (4) | 0.8350 (3) | 0.0401 (8) | |
C6 | 0.8744 (5) | −0.3017 (4) | 1.1107 (3) | 0.0398 (7) | |
H6A | 0.9143 | −0.2542 | 1.1811 | 0.060* | |
H6B | 0.9531 | −0.3591 | 1.1211 | 0.060* | |
H6C | 0.7859 | −0.3517 | 1.0915 | 0.060* | |
C7 | 0.8301 (4) | −0.2132 (3) | 1.0199 (3) | 0.0327 (6) | |
C8 | 0.8016 (4) | 0.2303 (3) | 0.9217 (3) | 0.0322 (6) | |
C9 | 0.8499 (5) | 0.3206 (4) | 1.0215 (3) | 0.0405 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Re1 | 0.02296 (6) | 0.02704 (7) | 0.02680 (6) | −0.00061 (4) | 0.01461 (5) | 0.00002 (4) |
F1A | 0.093 (8) | 0.062 (4) | 0.035 (3) | 0.002 (4) | 0.020 (3) | −0.009 (2) |
F2A | 0.045 (3) | 0.095 (8) | 0.076 (6) | 0.009 (4) | 0.030 (4) | −0.042 (6) |
F3A | 0.165 (15) | 0.083 (7) | 0.109 (9) | −0.093 (9) | 0.110 (11) | −0.062 (6) |
F1B | 0.173 (17) | 0.072 (6) | 0.102 (8) | −0.060 (9) | 0.113 (11) | −0.049 (6) |
F2B | 0.127 (11) | 0.060 (6) | 0.068 (5) | 0.036 (6) | 0.025 (5) | −0.015 (4) |
F3B | 0.037 (4) | 0.202 (19) | 0.112 (10) | −0.039 (7) | 0.037 (5) | −0.108 (12) |
O1 | 0.0305 (13) | 0.0433 (14) | 0.0409 (13) | −0.0065 (10) | 0.0232 (11) | −0.0090 (10) |
O2 | 0.0454 (16) | 0.0530 (17) | 0.0389 (13) | 0.0121 (14) | 0.0212 (12) | 0.0132 (12) |
O3 | 0.0558 (18) | 0.0402 (14) | 0.0468 (14) | −0.0161 (13) | 0.0324 (14) | −0.0126 (12) |
O4 | 0.0333 (12) | 0.0281 (10) | 0.0346 (10) | −0.0033 (9) | 0.0218 (10) | −0.0029 (8) |
O5 | 0.0503 (16) | 0.0378 (13) | 0.0446 (13) | −0.0049 (12) | 0.0306 (13) | 0.0024 (11) |
N1 | 0.0304 (13) | 0.0288 (12) | 0.0331 (12) | −0.0023 (10) | 0.0187 (11) | −0.0003 (10) |
N2 | 0.0314 (14) | 0.0352 (14) | 0.0377 (13) | −0.0035 (11) | 0.0218 (12) | −0.0036 (11) |
C1 | 0.0280 (14) | 0.0268 (12) | 0.0309 (13) | −0.0012 (11) | 0.0175 (12) | −0.0028 (10) |
C2 | 0.0330 (16) | 0.0398 (18) | 0.0342 (14) | 0.0019 (13) | 0.0202 (13) | 0.0022 (13) |
C3 | 0.0306 (15) | 0.0362 (16) | 0.0339 (14) | −0.0062 (13) | 0.0182 (13) | −0.0017 (12) |
C4 | 0.050 (3) | 0.086 (4) | 0.073 (3) | −0.026 (3) | 0.049 (3) | −0.037 (3) |
C5 | 0.0329 (17) | 0.051 (2) | 0.0396 (17) | −0.0085 (15) | 0.0229 (15) | −0.0123 (15) |
C6 | 0.0372 (18) | 0.0422 (19) | 0.0367 (15) | 0.0006 (15) | 0.0196 (14) | 0.0103 (14) |
C7 | 0.0289 (15) | 0.0321 (15) | 0.0351 (14) | −0.0015 (12) | 0.0175 (12) | 0.0000 (12) |
C8 | 0.0299 (15) | 0.0305 (14) | 0.0344 (13) | 0.0002 (12) | 0.0178 (12) | −0.0008 (11) |
C9 | 0.044 (2) | 0.0376 (17) | 0.0414 (17) | −0.0063 (15) | 0.0254 (16) | −0.0054 (14) |
Re1—C3 | 1.905 (4) | O3—C3 | 1.155 (4) |
Re1—C2 | 1.914 (4) | O4—C8 | 1.257 (4) |
Re1—C1 | 1.924 (3) | O5—C8 | 1.227 (4) |
Re1—N2 | 2.135 (3) | N1—C7 | 1.147 (4) |
Re1—N1 | 2.138 (3) | N2—C5 | 1.136 (5) |
Re1—O4 | 2.153 (2) | C4—C5 | 1.454 (6) |
F1A—C9 | 1.354 (8) | C4—H4A | 0.9800 |
F2A—C9 | 1.253 (7) | C4—H4B | 0.9800 |
F3A—C9 | 1.285 (9) | C4—H4C | 0.9800 |
F1B—C9 | 1.296 (8) | C6—C7 | 1.444 (5) |
F2B—C9 | 1.356 (9) | C6—H6A | 0.9800 |
F3B—C9 | 1.241 (10) | C6—H6B | 0.9800 |
O1—C1 | 1.143 (4) | C6—H6C | 0.9800 |
O2—C2 | 1.149 (4) | C8—C9 | 1.541 (5) |
C3—Re1—C2 | 89.26 (15) | H6A—C6—H6B | 109.5 |
C3—Re1—C1 | 89.64 (14) | C7—C6—H6C | 109.5 |
C2—Re1—C1 | 88.16 (15) | H6A—C6—H6C | 109.5 |
C3—Re1—N2 | 94.75 (13) | H6B—C6—H6C | 109.5 |
C2—Re1—N2 | 93.44 (14) | N1—C7—C6 | 178.2 (4) |
C1—Re1—N2 | 175.34 (12) | O5—C8—O4 | 129.8 (3) |
C3—Re1—N1 | 92.03 (13) | O5—C8—C9 | 116.0 (3) |
C2—Re1—N1 | 175.23 (12) | O4—C8—C9 | 114.2 (3) |
C1—Re1—N1 | 96.43 (13) | F3B—C9—F2A | 128.8 (8) |
N2—Re1—N1 | 81.88 (12) | F3B—C9—F3A | 36.0 (9) |
C3—Re1—O4 | 173.21 (12) | F2A—C9—F3A | 111.5 (9) |
C2—Re1—O4 | 96.39 (13) | F3B—C9—F1B | 108.5 (9) |
C1—Re1—O4 | 94.28 (11) | F2A—C9—F1B | 57.9 (7) |
N2—Re1—O4 | 81.20 (10) | F3A—C9—F1B | 130.9 (7) |
N1—Re1—O4 | 82.04 (10) | F3B—C9—F1A | 69.5 (10) |
C8—O4—Re1 | 122.0 (2) | F2A—C9—F1A | 106.7 (7) |
C7—N1—Re1 | 170.6 (3) | F3A—C9—F1A | 104.8 (8) |
C5—N2—Re1 | 176.2 (3) | F1B—C9—F1A | 50.1 (7) |
O1—C1—Re1 | 178.5 (3) | F3B—C9—F2B | 103.4 (10) |
O2—C2—Re1 | 178.7 (4) | F2A—C9—F2B | 46.1 (7) |
O3—C3—Re1 | 178.3 (3) | F3A—C9—F2B | 71.6 (10) |
C5—C4—H4A | 109.5 | F1B—C9—F2B | 101.3 (9) |
C5—C4—H4B | 109.5 | F1A—C9—F2B | 140.3 (6) |
H4A—C4—H4B | 109.5 | F3B—C9—C8 | 116.3 (6) |
C5—C4—H4C | 109.5 | F2A—C9—C8 | 113.1 (5) |
H4A—C4—H4C | 109.5 | F3A—C9—C8 | 111.8 (6) |
H4B—C4—H4C | 109.5 | F1B—C9—C8 | 116.1 (4) |
N2—C5—C4 | 178.6 (5) | F1A—C9—C8 | 108.4 (4) |
C7—C6—H6A | 109.5 | F2B—C9—C8 | 109.4 (5) |
C7—C6—H6B | 109.5 | ||
C2—Re1—O4—C8 | −43.2 (3) | O4—C8—C9—F2A | −72.6 (9) |
C1—Re1—O4—C8 | 45.4 (3) | O5—C8—C9—F3A | −19.7 (11) |
N2—Re1—O4—C8 | −135.7 (3) | O4—C8—C9—F3A | 160.5 (10) |
N1—Re1—O4—C8 | 141.3 (3) | O5—C8—C9—F1B | 171.4 (10) |
Re1—O4—C8—O5 | 1.2 (5) | O4—C8—C9—F1B | −8.3 (11) |
Re1—O4—C8—C9 | −179.1 (2) | O5—C8—C9—F1A | −134.7 (7) |
O5—C8—C9—F3B | −59.0 (13) | O4—C8—C9—F1A | 45.5 (8) |
O4—C8—C9—F3B | 121.3 (13) | O5—C8—C9—F2B | 57.6 (11) |
O5—C8—C9—F2A | 107.1 (9) | O4—C8—C9—F2B | −122.1 (10) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4B···O5i | 0.98 | 2.42 | 3.113 (5) | 127 |
C6—H6A···F1Aii | 0.98 | 2.35 | 3.237 (8) | 150 |
C6—H6B···O5iii | 0.98 | 2.46 | 3.075 (5) | 121 |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2; (ii) −x+2, y−1/2, −z+5/2; (iii) −x+2, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Re(C2F3O2)(C2H3N)2(CO)3] |
Mr | 465.36 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 10.8243 (2), 10.4745 (2), 14.4772 (3) |
β (°) | 125.584 (1) |
V (Å3) | 1334.90 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 9.16 |
Crystal size (mm) | 0.32 × 0.23 × 0.19 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.098, 0.175 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 24096, 5819, 5087 |
Rint | 0.037 |
(sin θ/λ)max (Å−1) | 0.807 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.031, 0.078, 1.06 |
No. of reflections | 5819 |
No. of parameters | 211 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 2.80, −1.27 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4B···O5i | 0.98 | 2.42 | 3.113 (5) | 127.2 |
C6—H6A···F1Aii | 0.98 | 2.35 | 3.237 (8) | 150.0 |
C6—H6B···O5iii | 0.98 | 2.46 | 3.075 (5) | 120.5 |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2; (ii) −x+2, y−1/2, −z+5/2; (iii) −x+2, −y, −z+2. |
Acknowledgements
H-KF and RK thank the Malaysian Government and Universiti Sains Malaysia for the Science Fund grant No. 305/PFIZIK/613312. RK thanks Universiti Sains Malaysia for a postdoctoral research fellowship.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The synthesis of solvent-coordinated complexes is a matter of considerable interest since they are useful sources for synthesis of new species resulting from the substitution of the coordinated solvent by a more basic ligand (Davies & Hartely, 1981). The lability of the solvent ligand easily gives rise to a highly reactive 16e- electrophilic fragment able to activate small molecules thus providing an important step in many chemical processes. On the other hand, Rhenium tricarbonyl complexes have been the subject of much attention, mainly because of their photophysical (Meyer 1989) and photochemical properties (Collin & Sauvage 1989) and in supramolecular chemistry (Balzani et al., 1996).
In the title compound (I) (Fig. 1), the Re atom adopts a distorted octahedral geometry. The bond lengths (Allen et al., 1987) and angles are within the normal ranges and are comparable to the related structures (Chan et al., 1977; Lazarova et al., 2004). The two acetonitriles and two carbonyl groups occupy the equatorial plane of the complex, with the third carbonyl ligands and the trifluoroacetate in the axial positions. The three carbonyl ligands at Re atom are arranged in a fac configuration. The cis-equatorial angle of N1–Re1–N2 is 81.88 (13) °. The deviation of the Re atom from the C1/C2/N1/N2 plane is -0.048 (1) Å.
The crystal structure is stabilized by C—H···O and C—H···F hydrogen bonds (Table 1, Fig. 2).