organic compounds
N-Benzyl-2-(2,4-dichlorophenoxy)acetamide
aCollege of Chemical and Environmental Engineering, Chongqing Three Gorges University, Chongqing, 404000, People's Republic of China, bShandong University of Traditional Chinese Medicine, Jinan, 250355, People's Republic of China, and cCollege of Pharmaceutical Sciences, Southwest University, Chongqing, 400716, People's Republic of China
*Correspondence e-mail: lizhubo2007@163.com
In the title compound, C15H13Cl2NO2, the dihedral angle between the aromatic rings is 27.17 (11)°. In the crystal the molecules are linked by N—H⋯O hydrogen bonds.
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808029371/cs2090sup1.cif
contains datablocks I, New_Global_Publ_Block. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808029371/cs2090Isup2.hkl
The solution of 2,4-dichlorophenol (1.0 mmol), N-benzyl-2-chloroacetamide (1.1 mmol), K2CO3 (1.1 mmol) and CH3CN (20 ml) was refluxed for 3 h. After completion of the reaction, the solution was cooled; solvent was evaporated under reduced pressure. The residue was poured into water and adjusted the pH to 6–7 with dilute hydrochloric acid (10%) and extracted with ethyl acetate, washed with brine and dried over anhydrous MgSO4 to obtain the corresponding crude product. The product was purified by
on silica gel using ethyl acetate as (yield 87%). Crystals suitable for X-ray diffraction were obtained by slow evaporation of a solution of the solid dissolved in ethyl acetate/hexane at room temperatures for 4 days.All H atoms were placed in geometrically calculated positions and refined using a riding model with C—H = 0.97 Å (for CH2 groups) and 0.96 Å (for CH3 groups), their isotropic displacement parameters were set to 1.2 times (1.5 times for CH3 groups) the equivalent displacement parameter of their parent atoms, except the N-H one which was freely refined.
Data collection: APEX2 (Bruker, 2005); cell
APEX2 (Bruker, 2005); data reduction: APEX2 (Bruker, 2005); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title compound showing displacement ellipsoids drawn at 50% probability level. |
C15H13Cl2NO2 | F(000) = 640 |
Mr = 310.16 | Dx = 1.421 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2023 reflections |
a = 4.7447 (6) Å | θ = 2.4–24.3° |
b = 26.821 (3) Å | µ = 0.45 mm−1 |
c = 11.3962 (15) Å | T = 298 K |
β = 90.402 (2)° | Prism, colourless |
V = 1450.2 (3) Å3 | 0.30 × 0.10 × 0.05 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 3254 independent reflections |
Radiation source: fine-focus sealed tube | 2233 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
phi and ω scans | θmax = 27.5°, θmin = 1.5° |
Absorption correction: multi-scan (PROGRAM? REFERENCE?) | h = −6→6 |
Tmin = 0.878, Tmax = 0.978 | k = −26→34 |
8418 measured reflections | l = −14→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0422P)2 + 0.2337P] where P = (Fo2 + 2Fc2)/3 |
3254 reflections | (Δ/σ)max = 0.001 |
185 parameters | Δρmax = 0.19 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C15H13Cl2NO2 | V = 1450.2 (3) Å3 |
Mr = 310.16 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 4.7447 (6) Å | µ = 0.45 mm−1 |
b = 26.821 (3) Å | T = 298 K |
c = 11.3962 (15) Å | 0.30 × 0.10 × 0.05 mm |
β = 90.402 (2)° |
Bruker SMART CCD area-detector diffractometer | 3254 independent reflections |
Absorption correction: multi-scan (PROGRAM? REFERENCE?) | 2233 reflections with I > 2σ(I) |
Tmin = 0.878, Tmax = 0.978 | Rint = 0.027 |
8418 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.103 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.19 e Å−3 |
3254 reflections | Δρmin = −0.24 e Å−3 |
185 parameters |
x | y | z | Uiso*/Ueq | ||
N | −0.5859 (3) | 0.13972 (6) | 1.13239 (14) | 0.0432 (4) | |
H0A | −0.757 (4) | 0.1456 (7) | 1.1390 (16) | 0.045 (6)* | |
Cl1 | −0.01187 (15) | 0.32457 (2) | 1.38966 (5) | 0.0718 (2) | |
Cl2 | 0.22803 (14) | 0.39046 (2) | 0.95534 (5) | 0.0711 (2) | |
O1 | −0.3722 (3) | 0.25520 (5) | 1.27258 (11) | 0.0467 (3) | |
O2 | −0.1562 (3) | 0.17031 (5) | 1.18000 (13) | 0.0533 (4) | |
C1 | −0.0568 (4) | 0.32072 (6) | 1.23900 (15) | 0.0419 (4) | |
C2 | 0.0880 (4) | 0.35291 (7) | 1.16733 (16) | 0.0470 (5) | |
H2A | 0.2087 | 0.3767 | 1.1991 | 0.056* | |
C3 | 0.0511 (4) | 0.34928 (7) | 1.04765 (16) | 0.0462 (5) | |
C4 | −0.1215 (4) | 0.31367 (7) | 0.99970 (17) | 0.0496 (5) | |
H4A | −0.1415 | 0.3112 | 0.9187 | 0.059* | |
C5 | −0.2659 (4) | 0.28142 (7) | 1.07243 (16) | 0.0468 (5) | |
H5A | −0.3834 | 0.2573 | 1.0398 | 0.056* | |
C6 | −0.2379 (4) | 0.28461 (6) | 1.19306 (15) | 0.0386 (4) | |
C7 | −0.5631 (4) | 0.21854 (7) | 1.23010 (18) | 0.0468 (5) | |
H7A | −0.6842 | 0.2334 | 1.1707 | 0.056* | |
H7B | −0.6816 | 0.2075 | 1.2941 | 0.056* | |
C8 | −0.4137 (4) | 0.17379 (6) | 1.17797 (15) | 0.0370 (4) | |
C9 | −0.4894 (4) | 0.09348 (7) | 1.08006 (17) | 0.0507 (5) | |
H9A | −0.2910 | 0.0966 | 1.0615 | 0.061* | |
H9B | −0.5912 | 0.0880 | 1.0071 | 0.061* | |
C10 | −0.5293 (4) | 0.04881 (7) | 1.15846 (17) | 0.0459 (5) | |
C11 | −0.7149 (5) | 0.01174 (9) | 1.1278 (2) | 0.0726 (7) | |
H11A | −0.8146 | 0.0140 | 1.0574 | 0.087* | |
C12 | −0.7554 (7) | −0.02898 (10) | 1.2005 (3) | 0.0908 (9) | |
H12A | −0.8836 | −0.0536 | 1.1788 | 0.109* | |
C13 | −0.6107 (7) | −0.03343 (10) | 1.3027 (3) | 0.0872 (9) | |
H13A | −0.6395 | −0.0608 | 1.3514 | 0.105* | |
C14 | −0.4209 (6) | 0.00298 (11) | 1.3337 (2) | 0.0822 (8) | |
H14A | −0.3190 | 0.0001 | 1.4034 | 0.099* | |
C15 | −0.3801 (5) | 0.04402 (9) | 1.2619 (2) | 0.0640 (6) | |
H15A | −0.2512 | 0.0685 | 1.2838 | 0.077* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N | 0.0327 (9) | 0.0426 (9) | 0.0543 (10) | 0.0032 (7) | 0.0025 (7) | −0.0059 (7) |
Cl1 | 0.1088 (5) | 0.0673 (4) | 0.0393 (3) | −0.0261 (3) | −0.0006 (3) | −0.0106 (2) |
Cl2 | 0.0869 (5) | 0.0663 (4) | 0.0604 (3) | −0.0168 (3) | 0.0117 (3) | 0.0131 (3) |
O1 | 0.0517 (8) | 0.0405 (7) | 0.0479 (7) | −0.0087 (6) | 0.0045 (6) | −0.0019 (6) |
O2 | 0.0307 (7) | 0.0527 (8) | 0.0764 (10) | 0.0030 (6) | 0.0010 (6) | −0.0051 (7) |
C1 | 0.0511 (11) | 0.0370 (10) | 0.0376 (9) | −0.0001 (8) | 0.0002 (8) | −0.0071 (8) |
C2 | 0.0539 (12) | 0.0377 (10) | 0.0492 (11) | −0.0072 (9) | 0.0011 (9) | −0.0065 (8) |
C3 | 0.0506 (11) | 0.0407 (10) | 0.0475 (11) | 0.0004 (9) | 0.0053 (9) | 0.0029 (9) |
C4 | 0.0584 (13) | 0.0515 (12) | 0.0388 (10) | 0.0030 (10) | −0.0048 (9) | 0.0002 (9) |
C5 | 0.0488 (11) | 0.0439 (11) | 0.0478 (11) | −0.0042 (9) | −0.0083 (9) | −0.0046 (9) |
C6 | 0.0394 (10) | 0.0320 (9) | 0.0445 (10) | 0.0029 (8) | 0.0014 (8) | −0.0020 (8) |
C7 | 0.0377 (10) | 0.0403 (10) | 0.0626 (12) | −0.0041 (8) | 0.0075 (9) | −0.0021 (9) |
C8 | 0.0329 (10) | 0.0354 (9) | 0.0428 (10) | 0.0010 (7) | 0.0025 (7) | 0.0057 (7) |
C9 | 0.0542 (13) | 0.0478 (12) | 0.0501 (11) | 0.0018 (9) | 0.0049 (9) | −0.0093 (9) |
C10 | 0.0456 (11) | 0.0404 (10) | 0.0519 (11) | 0.0043 (9) | 0.0101 (9) | −0.0087 (9) |
C11 | 0.0747 (17) | 0.0613 (15) | 0.0816 (17) | −0.0152 (13) | −0.0013 (13) | −0.0055 (13) |
C12 | 0.098 (2) | 0.0560 (16) | 0.119 (3) | −0.0247 (15) | 0.020 (2) | −0.0025 (16) |
C13 | 0.103 (2) | 0.0540 (16) | 0.105 (2) | 0.0148 (16) | 0.0368 (19) | 0.0151 (15) |
C14 | 0.096 (2) | 0.0809 (19) | 0.0693 (17) | 0.0239 (17) | 0.0031 (14) | 0.0134 (15) |
C15 | 0.0697 (15) | 0.0590 (14) | 0.0632 (14) | 0.0012 (11) | −0.0021 (12) | −0.0024 (11) |
N—C8 | 1.329 (2) | C7—C8 | 1.517 (2) |
N—C9 | 1.451 (2) | C7—H7A | 0.9700 |
N—H0A | 0.83 (2) | C7—H7B | 0.9700 |
Cl1—C1 | 1.7318 (18) | C9—C10 | 1.507 (3) |
Cl2—C3 | 1.7448 (19) | C9—H9A | 0.9700 |
O1—C6 | 1.363 (2) | C9—H9B | 0.9700 |
O1—C7 | 1.420 (2) | C10—C11 | 1.372 (3) |
O2—C8 | 1.225 (2) | C10—C15 | 1.377 (3) |
C1—C2 | 1.376 (3) | C11—C12 | 1.385 (4) |
C1—C6 | 1.394 (2) | C11—H11A | 0.9300 |
C2—C3 | 1.377 (3) | C12—C13 | 1.353 (4) |
C2—H2A | 0.9300 | C12—H12A | 0.9300 |
C3—C4 | 1.369 (3) | C13—C14 | 1.373 (4) |
C4—C5 | 1.383 (3) | C13—H13A | 0.9300 |
C4—H4A | 0.9300 | C14—C15 | 1.386 (3) |
C5—C6 | 1.383 (2) | C14—H14A | 0.9300 |
C5—H5A | 0.9300 | C15—H15A | 0.9300 |
C8—N—C9 | 123.59 (16) | O2—C8—N | 124.41 (16) |
C8—N—H0A | 115.6 (14) | O2—C8—C7 | 121.43 (16) |
C9—N—H0A | 120.7 (14) | N—C8—C7 | 114.16 (15) |
C6—O1—C7 | 118.32 (14) | N—C9—C10 | 113.22 (16) |
C2—C1—C6 | 121.47 (17) | N—C9—H9A | 108.9 |
C2—C1—Cl1 | 119.52 (14) | C10—C9—H9A | 108.9 |
C6—C1—Cl1 | 119.00 (14) | N—C9—H9B | 108.9 |
C1—C2—C3 | 118.88 (17) | C10—C9—H9B | 108.9 |
C1—C2—H2A | 120.6 | H9A—C9—H9B | 107.7 |
C3—C2—H2A | 120.6 | C11—C10—C15 | 118.4 (2) |
C4—C3—C2 | 121.07 (18) | C11—C10—C9 | 120.5 (2) |
C4—C3—Cl2 | 119.33 (15) | C15—C10—C9 | 121.05 (19) |
C2—C3—Cl2 | 119.60 (15) | C10—C11—C12 | 120.7 (3) |
C3—C4—C5 | 119.63 (18) | C10—C11—H11A | 119.7 |
C3—C4—H4A | 120.2 | C12—C11—H11A | 119.7 |
C5—C4—H4A | 120.2 | C13—C12—C11 | 120.9 (3) |
C6—C5—C4 | 120.84 (18) | C13—C12—H12A | 119.6 |
C6—C5—H5A | 119.6 | C11—C12—H12A | 119.6 |
C4—C5—H5A | 119.6 | C12—C13—C14 | 119.1 (3) |
O1—C6—C5 | 125.67 (16) | C12—C13—H13A | 120.5 |
O1—C6—C1 | 116.25 (15) | C14—C13—H13A | 120.5 |
C5—C6—C1 | 118.09 (17) | C13—C14—C15 | 120.5 (3) |
O1—C7—C8 | 112.50 (14) | C13—C14—H14A | 119.8 |
O1—C7—H7A | 109.1 | C15—C14—H14A | 119.8 |
C8—C7—H7A | 109.1 | C10—C15—C14 | 120.4 (2) |
O1—C7—H7B | 109.1 | C10—C15—H15A | 119.8 |
C8—C7—H7B | 109.1 | C14—C15—H15A | 119.8 |
H7A—C7—H7B | 107.8 | ||
C6—C1—C2—C3 | 0.3 (3) | C9—N—C8—O2 | 0.7 (3) |
Cl1—C1—C2—C3 | 179.74 (15) | C9—N—C8—C7 | −178.70 (16) |
C1—C2—C3—C4 | −1.4 (3) | O1—C7—C8—O2 | 3.5 (3) |
C1—C2—C3—Cl2 | 178.90 (14) | O1—C7—C8—N | −177.05 (15) |
C2—C3—C4—C5 | 1.3 (3) | C8—N—C9—C10 | 103.3 (2) |
Cl2—C3—C4—C5 | −178.97 (15) | N—C9—C10—C11 | 113.8 (2) |
C3—C4—C5—C6 | −0.1 (3) | N—C9—C10—C15 | −66.5 (3) |
C7—O1—C6—C5 | −1.4 (2) | C15—C10—C11—C12 | 1.4 (3) |
C7—O1—C6—C1 | 178.78 (15) | C9—C10—C11—C12 | −179.0 (2) |
C4—C5—C6—O1 | 179.23 (17) | C10—C11—C12—C13 | −0.8 (4) |
C4—C5—C6—C1 | −1.0 (3) | C11—C12—C13—C14 | −0.3 (4) |
C2—C1—C6—O1 | −179.29 (16) | C12—C13—C14—C15 | 0.7 (4) |
Cl1—C1—C6—O1 | 1.3 (2) | C11—C10—C15—C14 | −0.9 (3) |
C2—C1—C6—C5 | 0.9 (3) | C9—C10—C15—C14 | 179.4 (2) |
Cl1—C1—C6—C5 | −178.57 (14) | C13—C14—C15—C10 | −0.1 (4) |
C6—O1—C7—C8 | 75.3 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H0A···O2i | 0.83 (2) | 2.06 (2) | 2.883 (2) | 169 (2) |
Symmetry code: (i) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C15H13Cl2NO2 |
Mr | 310.16 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 4.7447 (6), 26.821 (3), 11.3962 (15) |
β (°) | 90.402 (2) |
V (Å3) | 1450.2 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.45 |
Crystal size (mm) | 0.30 × 0.10 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (PROGRAM? REFERENCE?) |
Tmin, Tmax | 0.878, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8418, 3254, 2233 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.103, 1.03 |
No. of reflections | 3254 |
No. of parameters | 185 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.19, −0.24 |
Computer programs: APEX2 (Bruker, 2005), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N—H0A···O2i | 0.83 (2) | 2.06 (2) | 2.883 (2) | 169 (2) |
Symmetry code: (i) x−1, y, z. |
Acknowledgements
This study was supported by the Science and Technology Key Project of Chongqing Science and Technology Commission, China (grant No. CSTC, 2008 A A1001)
References
Altomare, A., Burla, M. C., Camalli, M., Cascarano, G. L., Giacovazzo, C., Guagliardi, A., Moliterni, A. G. G., Polidori, G. & Spagna, R. (1999). J. Appl. Cryst. 32, 115–119. Web of Science CrossRef CAS IUCr Journals Google Scholar
Bruker (2005). SADABS and APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Li, Z.-B., Luo, Y.-H., Dong, W.-L., Li, J. & Zuo, H. (2008a). Acta Cryst. E64, o1610. Web of Science CSD CrossRef IUCr Journals Google Scholar
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The structure determination was performed as a part of a project on the interactions of small molecules with proteins. The single-crystal characterization should be valuable to understand such interactions. In our previous papers we reported single crystal structures of N-benzyl-2-(2-chloro-4-methylphenoxy)acetamide (Li et al., 2008a) and N-benzyl-2-(2,6-dichlorophenoxy)acetamide (Li et al., 2008b). In the title compound, C15H13Cl2NO2, all bond lengths and angles are normal. The dihedral angle between the two aryl rings is 27.17 (11)o. The molecules are connected via N-H···O hydrogen bonding into chains.