metal-organic compounds
catena-Poly[[(5,5′-dimethyl- 2,2′-bipyridine-κ2N,N′)cadmium(II)]-di-μ-chlorido]
aIslamic Azad University, Shahr-e-Rey Branch, Tehran, Iran, and bDepartment of Chemistry, Shahid Beheshti University, Tehran 1983963113, Iran
*Correspondence e-mail: v_amani2002@yahoo.com
The 2(C12H12N2)]n, contains one half-molecule; a twofold rotation axis passes through the Cd atom. The CdII atom is six-coordinated in a distorted octahedral configuration by two N atoms from 2,2′-bipyridine-5,5′-dimethyl and four bridging Cl atoms. The bridging function of the chloro atoms leads to a one-dimensional chain structure. There is a π–π contact between the pyridine rings [centroid–centroid distance = 3.9807 (9) Å].
of the title compound, [CdClRelated literature
For related literature, see: Chen et al. (2003); Flook et al. (1973); Hu & Englert (2002); Janiak et al. (1999); Satoh et al. (2001); Zhou et al. (2003); Khalighi et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808027657/hk2520sup1.cif
contains datablock I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808027657/hk2520Isup2.hkl
For the preparation of the title compound, a solution of 5,5'-dimethyl-2,2' -bipyridine (0.25 g, 1.33 mmol) in methanol (10 ml) was added to a solution of CdCl2.H2O (0.27 g, 1.33 mmol) in methanol (10 ml) at room temperature. The suitable crystals for X-ray analysis were obtained by methanol diffusion to a colorless solution in DMSO. Suitable crystals were isolated after one week (yield; 0.35 g, 71.6%, m.p. < 573 K).
H atoms were positioned geometrically, with C-H = 0.93 and 0.96 Å for aromatic and methyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C).
Data collection: SMART (Bruker, 1998); cell
SMART (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level [symmetry code: (a) -x, y, 3/2 - z]. | |
Fig. 2. A packing diagram of the title compound. |
[CdCl2(C12H12N2)] | F(000) = 720 |
Mr = 367.55 | Dx = 1.867 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 1004 reflections |
a = 20.365 (4) Å | θ = 4.1–29.2° |
b = 9.3135 (19) Å | µ = 2.06 mm−1 |
c = 7.2313 (14) Å | T = 298 K |
β = 107.53 (3)° | Block, colorless |
V = 1307.9 (5) Å3 | 0.20 × 0.17 × 0.15 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 1724 independent reflections |
Radiation source: fine-focus sealed tube | 1585 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.052 |
ϕ and ω scans | θmax = 29.2°, θmin = 4.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998) | h = −27→18 |
Tmin = 0.666, Tmax = 0.740 | k = −12→11 |
4283 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0543P)2 + 0.9451P] where P = (Fo2 + 2Fc2)/3 |
1724 reflections | (Δ/σ)max = 0.011 |
78 parameters | Δρmax = 0.68 e Å−3 |
0 restraints | Δρmin = −0.76 e Å−3 |
[CdCl2(C12H12N2)] | V = 1307.9 (5) Å3 |
Mr = 367.55 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 20.365 (4) Å | µ = 2.06 mm−1 |
b = 9.3135 (19) Å | T = 298 K |
c = 7.2313 (14) Å | 0.20 × 0.17 × 0.15 mm |
β = 107.53 (3)° |
Bruker SMART CCD area-detector diffractometer | 1724 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1998) | 1585 reflections with I > 2σ(I) |
Tmin = 0.666, Tmax = 0.740 | Rint = 0.052 |
4283 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.089 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.68 e Å−3 |
1724 reflections | Δρmin = −0.76 e Å−3 |
78 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.0000 | 0.58047 (2) | 0.7500 | 0.03912 (12) | |
Cl1 | 0.07886 (4) | 0.41364 (6) | 0.99832 (11) | 0.04502 (17) | |
N1 | 0.06292 (10) | 0.7876 (2) | 0.8828 (3) | 0.0383 (4) | |
C1 | 0.12723 (13) | 0.7815 (3) | 1.0067 (4) | 0.0460 (5) | |
H1 | 0.1458 | 0.6918 | 1.0488 | 0.055* | |
C2 | 0.16716 (14) | 0.9023 (3) | 1.0746 (5) | 0.0480 (6) | |
C3 | 0.23917 (17) | 0.8878 (5) | 1.2093 (6) | 0.0674 (9) | |
H3A | 0.2665 | 0.8339 | 1.1466 | 0.081* | |
H3B | 0.2381 | 0.8389 | 1.3251 | 0.081* | |
H3C | 0.2589 | 0.9815 | 1.2422 | 0.081* | |
C4 | 0.13695 (15) | 1.0347 (3) | 1.0145 (4) | 0.0484 (6) | |
H4 | 0.1612 | 1.1187 | 1.0594 | 0.058* | |
C5 | 0.07094 (15) | 1.0418 (3) | 0.8883 (4) | 0.0435 (5) | |
H5 | 0.0504 | 1.1303 | 0.8486 | 0.052* | |
C6 | 0.03548 (12) | 0.9157 (2) | 0.8213 (4) | 0.0344 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.04181 (17) | 0.02643 (15) | 0.04102 (17) | 0.000 | 0.00027 (11) | 0.000 |
Cl1 | 0.0458 (3) | 0.0370 (3) | 0.0479 (3) | 0.0092 (2) | 0.0074 (3) | 0.0073 (2) |
N1 | 0.0373 (9) | 0.0313 (9) | 0.0426 (10) | 0.0009 (8) | 0.0064 (8) | −0.0023 (8) |
C1 | 0.0381 (11) | 0.0426 (13) | 0.0501 (13) | 0.0045 (10) | 0.0024 (10) | −0.0068 (11) |
C2 | 0.0364 (12) | 0.0536 (16) | 0.0507 (14) | −0.0035 (10) | 0.0080 (11) | −0.0133 (11) |
C3 | 0.0394 (14) | 0.082 (2) | 0.070 (2) | −0.0029 (15) | −0.0003 (14) | −0.0177 (18) |
C4 | 0.0448 (13) | 0.0457 (14) | 0.0529 (15) | −0.0112 (11) | 0.0117 (11) | −0.0135 (12) |
C5 | 0.0487 (13) | 0.0303 (10) | 0.0533 (14) | −0.0046 (10) | 0.0179 (12) | −0.0062 (10) |
C6 | 0.0339 (10) | 0.0296 (11) | 0.0406 (11) | 0.0012 (7) | 0.0129 (9) | −0.0020 (8) |
Cd1—Cl1i | 2.5457 (9) | C2—C3 | 1.502 (4) |
Cd1—Cl1ii | 2.7668 (10) | C3—H3A | 0.9600 |
Cd1—Cl1iii | 2.7668 (10) | C3—H3B | 0.9600 |
Cl1—Cd1 | 2.5457 (9) | C3—H3C | 0.9600 |
Cl1—Cd1ii | 2.7668 (10) | C4—C5 | 1.380 (4) |
Cd1—N1i | 2.355 (2) | C4—H4 | 0.9300 |
N1—Cd1 | 2.355 (2) | C5—C6 | 1.387 (3) |
C1—N1 | 1.347 (3) | C5—H5 | 0.9300 |
C1—C2 | 1.389 (4) | C6—N1 | 1.336 (3) |
C1—H1 | 0.9300 | C6—C6i | 1.501 (5) |
C2—C4 | 1.388 (4) | ||
Cd1—Cl1—Cd1ii | 94.82 (2) | N1—C1—H1 | 118.3 |
Cl1i—Cd1—Cl1ii | 96.22 (3) | C2—C1—H1 | 118.3 |
Cl1—Cd1—Cl1ii | 85.18 (2) | C4—C2—C1 | 116.9 (3) |
Cl1i—Cd1—Cl1iii | 85.18 (2) | C4—C2—C3 | 122.5 (3) |
Cl1—Cd1—Cl1iii | 96.22 (3) | C1—C2—C3 | 120.6 (3) |
Cl1ii—Cd1—Cl1iii | 177.73 (2) | C2—C3—H3A | 109.5 |
Cl1i—Cd1—Cl1 | 104.77 (4) | C2—C3—H3B | 109.5 |
N1—Cd1—Cl1i | 159.71 (6) | H3A—C3—H3B | 109.5 |
N1i—Cd1—Cl1i | 93.57 (6) | C2—C3—H3C | 109.5 |
N1—Cd1—Cl1 | 93.57 (6) | H3A—C3—H3C | 109.5 |
N1i—Cd1—Cl1 | 159.71 (6) | H3B—C3—H3C | 109.5 |
N1—Cd1—Cl1ii | 93.89 (5) | C5—C4—C2 | 120.1 (3) |
N1i—Cd1—Cl1ii | 84.24 (5) | C5—C4—H4 | 120.0 |
N1—Cd1—Cl1iii | 84.24 (5) | C2—C4—H4 | 120.0 |
N1i—Cd1—Cl1iii | 93.89 (5) | C4—C5—C6 | 119.4 (3) |
N1—Cd1—N1i | 69.98 (10) | C4—C5—H5 | 120.3 |
C6—N1—C1 | 119.0 (2) | C6—C5—H5 | 120.3 |
C6—N1—Cd1 | 118.31 (15) | N1—C6—C5 | 121.2 (2) |
C1—N1—Cd1 | 122.49 (18) | N1—C6—C6i | 116.64 (13) |
N1—C1—C2 | 123.3 (3) | C5—C6—C6i | 122.15 (16) |
N1—C1—C2—C4 | 2.3 (5) | C1—N1—Cd1—N1i | −176.1 (3) |
N1—C1—C2—C3 | −178.6 (3) | C6—N1—Cd1—Cl1i | 36.2 (3) |
C1—C2—C4—C5 | −1.9 (4) | C1—N1—Cd1—Cl1i | −138.71 (19) |
C3—C2—C4—C5 | 179.1 (3) | C6—N1—Cd1—Cl1 | −168.97 (17) |
C2—C4—C5—C6 | −0.5 (4) | C1—N1—Cd1—Cl1 | 16.1 (2) |
C4—C5—C6—N1 | 2.8 (4) | C6—N1—Cd1—Cl1ii | −83.57 (18) |
C4—C5—C6—C6i | −177.9 (3) | C1—N1—Cd1—Cl1ii | 101.5 (2) |
C5—C6—N1—C1 | −2.5 (4) | C6—N1—Cd1—Cl1iii | 95.14 (18) |
C6i—C6—N1—C1 | 178.2 (3) | C1—N1—Cd1—Cl1iii | −79.8 (2) |
C5—C6—N1—Cd1 | −177.59 (18) | Cd1ii—Cl1—Cd1—N1 | 93.61 (5) |
C6i—C6—N1—Cd1 | 3.0 (3) | Cd1ii—Cl1—Cd1—N1i | 58.77 (15) |
C2—C1—N1—C6 | −0.1 (4) | Cd1ii—Cl1—Cd1—Cl1i | −95.17 (2) |
C2—C1—N1—Cd1 | 174.8 (2) | Cd1ii—Cl1—Cd1—Cl1ii | 0.0 |
C6—N1—Cd1—N1i | −1.14 (13) | Cd1ii—Cl1—Cd1—Cl1iii | 178.20 (2) |
Symmetry codes: (i) −x, y, −z+3/2; (ii) −x, −y+1, −z+2; (iii) x, −y+1, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | [CdCl2(C12H12N2)] |
Mr | 367.55 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 298 |
a, b, c (Å) | 20.365 (4), 9.3135 (19), 7.2313 (14) |
β (°) | 107.53 (3) |
V (Å3) | 1307.9 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.06 |
Crystal size (mm) | 0.20 × 0.17 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1998) |
Tmin, Tmax | 0.666, 0.740 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4283, 1724, 1585 |
Rint | 0.052 |
(sin θ/λ)max (Å−1) | 0.686 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.089, 1.08 |
No. of reflections | 1724 |
No. of parameters | 78 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.68, −0.76 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXTL (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Cd1—Cl1i | 2.7668 (10) | N1—Cd1 | 2.355 (2) |
Cl1—Cd1 | 2.5457 (9) | ||
Cl1—Cd1—Cl1i | 85.18 (2) | N1—Cd1—Cl1 | 93.57 (6) |
Cl1—Cd1—Cl1ii | 96.22 (3) | N1iii—Cd1—Cl1 | 159.71 (6) |
Cl1i—Cd1—Cl1ii | 177.73 (2) | N1—Cd1—Cl1i | 93.89 (5) |
Cl1iii—Cd1—Cl1 | 104.77 (4) | N1—Cd1—Cl1ii | 84.24 (5) |
N1—Cd1—Cl1iii | 159.71 (6) | N1—Cd1—N1iii | 69.98 (10) |
Symmetry codes: (i) −x, −y+1, −z+2; (ii) x, −y+1, z−1/2; (iii) −x, y, −z+3/2. |
Acknowledgements
We are grateful to the Islamic Azad University, Shahr-e-Rey Branch, for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
In a recent paper, we reported the synthesis and crystal structure of [Zn(5,5'-dmbpy)Cl2], (Khalighi et al., 2008) [where 5,5'-dmbpy is 5,5'-dimethyl-2,2'-bipyridine]. Several CdII polymer complexes, with formula, [Cd(N—N)(µ-Cl)2]n, such as [Cd(phen)(µ-Cl)2]n, (II) (Chen et al., 2003), {[Cd(5,5'-dabpy)(µ-Cl)2].2H2O}n, (III) (Janiak et al., 1999) and [Cd(bipy)(µ-Cl)2]n, (IV) (Zhou et al., 2003) [where bipy is 2,2'-bipyridine, 5,5'-dabpy is 5,5'-diamino -2,2'-bipyridine and phen is 1,10-phenanthroline] have been synthesized and characterized by single-crystal X-ray diffraction methods. There are also several CdII polymer complexes, with formula, [Cd(µ-Cl)2L2]n, such as [Cd(µ-Cl)2(3,5-Me2py)2]n, (V), [Cd(µ-Cl)2(3,5-Br2py)2]n, (VI) and [Cd(µ-Cl)2(3,5-Cl2py)2]n, (VII) (Hu & Englert, 2002), [Cd(µ-Cl)2(3-Mepy)2]n, (VIII) (Satoh, et al., 2001) and [Cd(µ-Cl)2(im)2]n, (IX) (Flook et al., 1973) [where py is pyridine and im is imidazole] have been synthesized and characterized by single-crystal X-ray diffraction methods. We report herein the synthesis and crystal structure of the title compound (I).
The asymmetric unit of the title compound, (I), contains one half-molecule (Fig. 1). The CdII atom is six-coordinated in a distorted octahedral configuration by two N atoms from 2,2'-bipyridine-5,5'-dimethyl and four bridging Cl atoms. The bridging function of chloro atoms leads to a one-dimensional chain structure. The Cd—Cl and Cd—N bond lengths and angles (Table 1) are within normal ranges, as in (II), (III) and (IV).
In the crystal structure, the π—π contact (Fig. 2) between the pyridine rings, Cg4···Cg4i [symmetry code: (i) x, 1/2- y, z, where Cg4 is centroid of the ring (N1/C1/C2/C4-C6)] may stabilize the structure, with centroid-centroid distance of 3.9807 (9) Å.