metal-organic compounds
μ-Squarato-κ2O1:O2-bis{[2-(2-aminoethyl)pyridine-κ2N,N′]aquanickel(II)} squarate 0.25-hydrate
aOndokuz Mayıs University, Art and Science Faculty, Department of Chemistry, 55139 Samsun, Turkey, and bOndokuz Mayıs University, Art and Science Faculty, Department of Physics, 55139 Samsun, Turkey
*Correspondence e-mail: iucar@omu.edu.tr
The 2(C4O4)(C7H10N2)4(H2O)2]C4O4·0.25H2O, contains one-half of a squarate ligand, one-half of an uncoordinated squarate dianion, two 2-(2-aminoethyl)pyridine ligands and one aqua ligand, all coordinated to an NiII ion. The compound also contains 0.25 solvent water molecules. The NiII ion has distorted octahedral geometry. The squarate ligand adopts a μ-1,2 coordination mode, the intradimer NiII⋯NiII separation being 7.1442 (7) Å, while the other squarate unit acts as a counter-anion. The is stabilized by intermolecular O—H⋯O and N—H⋯O hydrogen-bond interactions, forming a three-dimensional network.
of title compound, [NiRelated literature
For general background, see: Bernardinelli et al. (1989); Bulut et al. (2004); Castro et al. (1995, 1997); Crispini et al. (2000); Kirchmaier et al. (2003); Lee et al. (1996); Milet et al. (2003); Solans et al. (1990); Spek (2003); Trombe et al. (2002); Uçar (2008); Uçar et al. (2006, 2007); Yang et al. (2003).
Experimental
Crystal data
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Refinement
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Data collection: X-AREA (Stoe & Cie, 2002); cell X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808030808/pk2116sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808030808/pk2116Isup2.hkl
Squaric acid (0.57 g, 5 mmol), dissolved in 25 ml water was neutralized with NaOH (0.40 g, 10 mmol) and was added to a hot solution of the NiCl2.6H2O (1.19 g, 5 mmol) dissolved in 100 ml water. The mixture was refluxed at 353 K for 12 h and then cooled to room temperature. The blue crystals that formed were filtered and washed with water and alcohol and dried in vacuum. A solution of 2(2-aminoethyl)pyridine) (0.25 g, 2 mmol) in ethanol (50 ml) was added dropwise with stirring to a suspension of the NiSq.2H2O (0.207 g, 1 mmol) in water (100 ml). A few days later, well formed blue crystals were selected for X-ray studies.
H atoms attached to C atoms were placed at calculated positions (C—H=0.93 and 0.97 Å) and were allovwed to ride on the parent atom [Uiso(H)=1.2eq(C)]. The remaining H atoms were located in a difference map. At this stage, the maximum difference density of 1.31 e Å-3 indicated the presence of a possible atom site. A check of the solvent-accessible volume using PLATON (Spek, 2003) showed a total potential volume of 33.0 Å3. Attempts to refine this peak as a water O atom (O6) resulted in a partial occupancy of 0.12. For the final cycle of
the occupancy of O6 was fixed at 0.125. H atoms attached to O6 were not located.Data collection: X-AREA (Stoe & Cie, 2002); cell
X-AREA (Stoe & Cie, 2002); data reduction: X-RED32 (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPIII (Burnett & Johnson, 1996); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. : ORTEPIII (Burnett & Johnson, 1996) plot of the [Ni2(aepy)4(sq)(H2O)2].sq 0.25H2O. Non-H atoms are drawn with displacement ellipsoids at the 30% probability level and H atoms are shown as small spheres of arbitrary radii. [Symmetry codes: (i) -x, y, -z + 1/2; (ii) -x + 1/2, -y + 1.5, -z] | |
Fig. 2. : Showing of intermolecular hydrogen bonding interactions (dashed lines) in the unitcell. |
[Ni2(C4O4)(C7H10N2)4(H2O)2]C4O4·0.25H2O | F(000) = 1816 |
Mr = 870.16 | Dx = 1.484 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -C 2yc | Cell parameters from 24222 reflections |
a = 28.037 (3) Å | θ = 1.7–28.0° |
b = 8.0409 (5) Å | µ = 1.03 mm−1 |
c = 17.7752 (16) Å | T = 297 K |
β = 103.572 (7)° | Prism, blue |
V = 3895.3 (5) Å3 | 0.3 × 0.2 × 0.1 mm |
Z = 4 |
Stoe IPDS-II diffractometer | 3809 independent reflections |
Radiation source: fine-focus sealed tube | 3148 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
Detector resolution: 6.67 pixels mm-1 | θmax = 26.0°, θmin = 2.4° |
ω scans | h = −34→34 |
Absorption correction: integration (X-RED32; Stoe & Cie, 2002) | k = −9→9 |
Tmin = 0.49, Tmax = 0.81 | l = −21→21 |
12243 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.073 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0385P)2 + 0.9229P] where P = (Fo2 + 2Fc2)/3 |
3809 reflections | (Δ/σ)max = 0.001 |
282 parameters | Δρmax = 0.29 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
[Ni2(C4O4)(C7H10N2)4(H2O)2]C4O4·0.25H2O | V = 3895.3 (5) Å3 |
Mr = 870.16 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.037 (3) Å | µ = 1.03 mm−1 |
b = 8.0409 (5) Å | T = 297 K |
c = 17.7752 (16) Å | 0.3 × 0.2 × 0.1 mm |
β = 103.572 (7)° |
Stoe IPDS-II diffractometer | 3809 independent reflections |
Absorption correction: integration (X-RED32; Stoe & Cie, 2002) | 3148 reflections with I > 2σ(I) |
Tmin = 0.49, Tmax = 0.81 | Rint = 0.042 |
12243 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.073 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.03 | Δρmax = 0.29 e Å−3 |
3809 reflections | Δρmin = −0.26 e Å−3 |
282 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.01456 (9) | 0.6924 (3) | 0.42515 (16) | 0.0615 (6) | |
H1 | 0.0078 | 0.6622 | 0.3732 | 0.074* | |
C2 | −0.02378 (11) | 0.7007 (4) | 0.4607 (2) | 0.0880 (9) | |
H2 | −0.0557 | 0.6790 | 0.4331 | 0.106* | |
C3 | −0.01433 (14) | 0.7411 (5) | 0.5371 (3) | 0.1052 (12) | |
H3 | −0.0396 | 0.7486 | 0.5627 | 0.126* | |
C4 | 0.03335 (14) | 0.7707 (4) | 0.5755 (2) | 0.0885 (10) | |
H4 | 0.0406 | 0.7952 | 0.6281 | 0.106* | |
C5 | 0.07099 (10) | 0.7643 (3) | 0.53672 (15) | 0.0568 (6) | |
C6 | 0.12298 (10) | 0.7973 (3) | 0.57849 (13) | 0.0590 (6) | |
H6A | 0.1253 | 0.7886 | 0.6337 | 0.071* | |
H6B | 0.1311 | 0.9109 | 0.5679 | 0.071* | |
C7 | 0.16091 (9) | 0.6827 (3) | 0.55784 (13) | 0.0535 (5) | |
H7A | 0.1905 | 0.6846 | 0.5990 | 0.064* | |
H7B | 0.1485 | 0.5697 | 0.5529 | 0.064* | |
C8 | 0.18856 (8) | 0.9557 (3) | 0.32778 (14) | 0.0528 (5) | |
H8 | 0.1919 | 1.0099 | 0.3749 | 0.063* | |
C9 | 0.21215 (9) | 1.0213 (3) | 0.27497 (17) | 0.0667 (7) | |
H9 | 0.2311 | 1.1169 | 0.2865 | 0.080* | |
C10 | 0.20735 (10) | 0.9436 (3) | 0.20518 (17) | 0.0685 (7) | |
H10 | 0.2223 | 0.9864 | 0.1679 | 0.082* | |
C11 | 0.17984 (9) | 0.8010 (3) | 0.19165 (14) | 0.0586 (6) | |
H11 | 0.1759 | 0.7462 | 0.1445 | 0.070* | |
C12 | 0.15786 (8) | 0.7380 (2) | 0.24758 (12) | 0.0445 (4) | |
C13 | 0.13096 (9) | 0.5757 (3) | 0.23578 (13) | 0.0539 (5) | |
H13A | 0.1395 | 0.5175 | 0.1929 | 0.065* | |
H13B | 0.0960 | 0.5978 | 0.2216 | 0.065* | |
C14 | 0.14211 (8) | 0.4629 (2) | 0.30683 (13) | 0.0498 (5) | |
H14A | 0.1344 | 0.3488 | 0.2908 | 0.060* | |
H14B | 0.1768 | 0.4686 | 0.3313 | 0.060* | |
C15 | 0.02527 (7) | 0.9053 (2) | 0.27139 (11) | 0.0361 (4) | |
C16 | 0.02560 (8) | 1.0864 (2) | 0.27195 (12) | 0.0452 (5) | |
C17 | 0.24949 (7) | 0.8704 (2) | 0.01973 (11) | 0.0375 (4) | |
C18 | 0.21239 (7) | 0.7408 (2) | −0.00476 (11) | 0.0375 (4) | |
N1 | 0.06135 (7) | 0.7253 (2) | 0.46111 (11) | 0.0472 (4) | |
N2 | 0.17263 (6) | 0.7340 (2) | 0.48476 (10) | 0.0404 (4) | |
N3 | 0.16111 (6) | 0.81826 (19) | 0.31494 (9) | 0.0396 (4) | |
N4 | 0.11369 (7) | 0.51155 (19) | 0.36278 (11) | 0.0407 (4) | |
O1 | 0.05537 (5) | 0.79065 (16) | 0.29572 (8) | 0.0449 (3) | |
O2 | 0.05610 (6) | 1.19590 (18) | 0.29910 (11) | 0.0663 (5) | |
O3 | 0.24837 (5) | 1.01589 (15) | 0.04408 (9) | 0.0487 (4) | |
O4 | 0.16716 (5) | 0.73117 (15) | −0.01038 (9) | 0.0470 (3) | |
O5 | 0.10943 (6) | 1.01843 (17) | 0.41638 (11) | 0.0479 (4) | |
O6 | 0.0000 | 0.4863 (13) | 0.2500 | 0.121 (6) | 0.25 |
Ni1 | 0.114036 (8) | 0.76294 (2) | 0.391260 (13) | 0.03314 (8) | |
H5A | 0.1284 (10) | 1.079 (3) | 0.4454 (16) | 0.062 (8)* | |
H5B | 0.0958 (10) | 1.073 (3) | 0.3792 (16) | 0.062 (8)* | |
H2A | 0.1897 (8) | 0.829 (3) | 0.4946 (13) | 0.050 (6)* | |
H4B | 0.0829 (9) | 0.485 (3) | 0.3435 (14) | 0.052 (6)* | |
H4A | 0.1238 (8) | 0.454 (3) | 0.4042 (13) | 0.043 (6)* | |
H2B | 0.1917 (9) | 0.666 (3) | 0.4725 (14) | 0.051 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0446 (13) | 0.0681 (13) | 0.0736 (17) | −0.0058 (11) | 0.0174 (12) | 0.0051 (12) |
C2 | 0.0501 (17) | 0.107 (2) | 0.115 (3) | −0.0029 (15) | 0.0356 (18) | 0.005 (2) |
C3 | 0.077 (2) | 0.125 (3) | 0.135 (3) | 0.0032 (19) | 0.069 (2) | −0.012 (2) |
C4 | 0.096 (2) | 0.102 (2) | 0.085 (2) | 0.0014 (18) | 0.0552 (19) | −0.0172 (17) |
C5 | 0.0688 (15) | 0.0494 (11) | 0.0581 (14) | 0.0021 (10) | 0.0271 (12) | −0.0041 (10) |
C6 | 0.0784 (18) | 0.0595 (12) | 0.0405 (12) | −0.0028 (12) | 0.0168 (12) | −0.0056 (10) |
C7 | 0.0616 (15) | 0.0523 (11) | 0.0414 (12) | 0.0008 (10) | 0.0017 (10) | 0.0058 (9) |
C8 | 0.0499 (12) | 0.0523 (11) | 0.0573 (14) | −0.0113 (10) | 0.0150 (10) | −0.0018 (10) |
C9 | 0.0566 (14) | 0.0622 (13) | 0.086 (2) | −0.0107 (11) | 0.0271 (14) | 0.0122 (13) |
C10 | 0.0680 (16) | 0.0727 (15) | 0.0763 (18) | 0.0119 (13) | 0.0403 (14) | 0.0257 (14) |
C11 | 0.0643 (15) | 0.0691 (14) | 0.0469 (13) | 0.0177 (12) | 0.0221 (11) | 0.0091 (11) |
C12 | 0.0422 (11) | 0.0507 (10) | 0.0412 (10) | 0.0092 (8) | 0.0109 (9) | 0.0028 (9) |
C13 | 0.0606 (14) | 0.0580 (12) | 0.0442 (12) | −0.0021 (10) | 0.0148 (10) | −0.0159 (10) |
C14 | 0.0523 (12) | 0.0358 (9) | 0.0623 (14) | 0.0000 (8) | 0.0152 (10) | −0.0090 (9) |
C15 | 0.0335 (10) | 0.0379 (9) | 0.0354 (10) | −0.0017 (7) | 0.0048 (8) | −0.0008 (7) |
C16 | 0.0482 (12) | 0.0399 (9) | 0.0420 (11) | −0.0030 (8) | −0.0004 (9) | 0.0023 (8) |
C17 | 0.0379 (10) | 0.0355 (8) | 0.0371 (10) | 0.0011 (7) | 0.0046 (9) | 0.0034 (7) |
C18 | 0.0391 (10) | 0.0341 (8) | 0.0368 (9) | 0.0013 (7) | 0.0036 (8) | 0.0045 (7) |
N1 | 0.0442 (10) | 0.0479 (9) | 0.0529 (10) | −0.0028 (7) | 0.0181 (8) | −0.0007 (8) |
N2 | 0.0373 (9) | 0.0374 (8) | 0.0429 (9) | 0.0007 (7) | 0.0023 (7) | −0.0019 (7) |
N3 | 0.0379 (9) | 0.0415 (8) | 0.0390 (9) | −0.0037 (6) | 0.0085 (7) | 0.0004 (7) |
N4 | 0.0386 (10) | 0.0356 (8) | 0.0447 (10) | −0.0031 (7) | 0.0033 (8) | −0.0010 (7) |
O1 | 0.0379 (7) | 0.0416 (7) | 0.0484 (8) | 0.0058 (6) | −0.0039 (6) | −0.0029 (6) |
O2 | 0.0651 (11) | 0.0435 (7) | 0.0744 (12) | −0.0173 (7) | −0.0155 (9) | 0.0054 (7) |
O3 | 0.0471 (8) | 0.0340 (6) | 0.0627 (10) | 0.0011 (6) | 0.0083 (7) | −0.0049 (6) |
O4 | 0.0369 (7) | 0.0426 (7) | 0.0590 (9) | 0.0006 (6) | 0.0061 (7) | 0.0018 (6) |
O5 | 0.0455 (8) | 0.0366 (7) | 0.0543 (9) | 0.0007 (6) | −0.0032 (7) | −0.0056 (7) |
O6 | 0.081 (8) | 0.056 (6) | 0.196 (16) | 0.000 | −0.027 (9) | 0.000 |
Ni1 | 0.03027 (13) | 0.03237 (12) | 0.03530 (13) | −0.00067 (9) | 0.00469 (9) | −0.00121 (9) |
C1—N1 | 1.344 (3) | C13—C14 | 1.527 (3) |
C1—C2 | 1.371 (4) | C13—H13A | 0.9700 |
C1—H1 | 0.9300 | C13—H13B | 0.9700 |
C2—C3 | 1.361 (5) | C14—N4 | 1.466 (3) |
C2—H2 | 0.9300 | C14—H14A | 0.9700 |
C3—C4 | 1.371 (5) | C14—H14B | 0.9700 |
C3—H3 | 0.9300 | C15—O1 | 1.256 (2) |
C4—C5 | 1.391 (4) | C15—C15i | 1.442 (4) |
C4—H4 | 0.9300 | C15—C16 | 1.456 (3) |
C5—N1 | 1.344 (3) | C16—O2 | 1.243 (2) |
C5—C6 | 1.496 (4) | C16—C16i | 1.464 (4) |
C6—C7 | 1.516 (3) | C17—O3 | 1.250 (2) |
C6—H6A | 0.9700 | C17—C18 | 1.465 (2) |
C6—H6B | 0.9700 | C17—C18ii | 1.465 (3) |
C7—N2 | 1.471 (3) | C18—O4 | 1.251 (2) |
C7—H7A | 0.9700 | C18—C17ii | 1.465 (3) |
C7—H7B | 0.9700 | N1—Ni1 | 2.1624 (17) |
C8—N3 | 1.336 (3) | N2—Ni1 | 2.0576 (17) |
C8—C9 | 1.374 (3) | N2—H2A | 0.90 (2) |
C8—H8 | 0.9300 | N2—H2B | 0.83 (2) |
C9—C10 | 1.367 (4) | N3—Ni1 | 2.1495 (16) |
C9—H9 | 0.9300 | N4—Ni1 | 2.0833 (15) |
C10—C11 | 1.372 (4) | N4—H4B | 0.88 (2) |
C10—H10 | 0.9300 | N4—H4A | 0.86 (2) |
C11—C12 | 1.383 (3) | O1—Ni1 | 2.0803 (13) |
C11—H11 | 0.9300 | O5—Ni1 | 2.1126 (14) |
C12—N3 | 1.344 (3) | O5—H5A | 0.81 (3) |
C12—C13 | 1.497 (3) | O5—H5B | 0.81 (3) |
N1—C1—C2 | 123.7 (3) | C13—C14—H14B | 109.4 |
N1—C1—H1 | 118.2 | H14A—C14—H14B | 108.0 |
C2—C1—H1 | 118.2 | O1—C15—C15i | 132.78 (10) |
C3—C2—C1 | 118.8 (3) | O1—C15—C16 | 136.79 (18) |
C3—C2—H2 | 120.6 | C15i—C15—C16 | 90.42 (11) |
C1—C2—H2 | 120.6 | O2—C16—C15 | 135.5 (2) |
C2—C3—C4 | 118.5 (3) | O2—C16—C16i | 134.90 (12) |
C2—C3—H3 | 120.8 | C15—C16—C16i | 89.58 (11) |
C4—C3—H3 | 120.8 | O3—C17—C18 | 134.03 (18) |
C3—C4—C5 | 120.7 (3) | O3—C17—C18ii | 135.44 (18) |
C3—C4—H4 | 119.6 | C18—C17—C18ii | 90.52 (15) |
C5—C4—H4 | 119.6 | O4—C18—C17ii | 135.81 (17) |
N1—C5—C4 | 120.4 (3) | O4—C18—C17 | 134.71 (17) |
N1—C5—C6 | 118.8 (2) | C17ii—C18—C17 | 89.48 (15) |
C4—C5—C6 | 120.8 (3) | C1—N1—C5 | 117.8 (2) |
C5—C6—C7 | 115.41 (19) | C1—N1—Ni1 | 118.46 (16) |
C5—C6—H6A | 108.4 | C5—N1—Ni1 | 122.50 (15) |
C7—C6—H6A | 108.4 | C7—N2—Ni1 | 116.32 (14) |
C5—C6—H6B | 108.4 | C7—N2—H2A | 106.6 (15) |
C7—C6—H6B | 108.4 | Ni1—N2—H2A | 110.4 (14) |
H6A—C6—H6B | 107.5 | C7—N2—H2B | 109.6 (17) |
N2—C7—C6 | 110.98 (18) | Ni1—N2—H2B | 107.7 (17) |
N2—C7—H7A | 109.4 | H2A—N2—H2B | 106 (2) |
C6—C7—H7A | 109.4 | C8—N3—C12 | 117.74 (18) |
N2—C7—H7B | 109.4 | C8—N3—Ni1 | 118.55 (14) |
C6—C7—H7B | 109.4 | C12—N3—Ni1 | 122.65 (13) |
H7A—C7—H7B | 108.0 | C14—N4—Ni1 | 116.85 (12) |
N3—C8—C9 | 123.5 (2) | C14—N4—H4B | 108.3 (15) |
N3—C8—H8 | 118.3 | Ni1—N4—H4B | 106.0 (14) |
C9—C8—H8 | 118.3 | C14—N4—H4A | 108.5 (14) |
C10—C9—C8 | 119.0 (2) | Ni1—N4—H4A | 109.3 (14) |
C10—C9—H9 | 120.5 | H4B—N4—H4A | 108 (2) |
C8—C9—H9 | 120.5 | C15—O1—Ni1 | 134.29 (12) |
C9—C10—C11 | 118.2 (2) | Ni1—O5—H5A | 131.0 (18) |
C9—C10—H10 | 120.9 | Ni1—O5—H5B | 113.3 (18) |
C11—C10—H10 | 120.9 | H5A—O5—H5B | 108 (3) |
C10—C11—C12 | 120.5 (2) | N2—Ni1—O1 | 179.19 (7) |
C10—C11—H11 | 119.8 | N2—Ni1—N4 | 92.52 (7) |
C12—C11—H11 | 119.8 | O1—Ni1—N4 | 87.01 (6) |
N3—C12—C11 | 121.1 (2) | N2—Ni1—O5 | 90.91 (7) |
N3—C12—C13 | 118.03 (18) | O1—Ni1—O5 | 89.58 (6) |
C11—C12—C13 | 120.9 (2) | N4—Ni1—O5 | 176.22 (7) |
C12—C13—C14 | 113.80 (18) | N2—Ni1—N3 | 92.36 (7) |
C12—C13—H13A | 108.8 | O1—Ni1—N3 | 86.99 (6) |
C14—C13—H13A | 108.8 | N4—Ni1—N3 | 90.91 (7) |
C12—C13—H13B | 108.8 | O5—Ni1—N3 | 90.53 (6) |
C14—C13—H13B | 108.8 | N2—Ni1—N1 | 92.52 (7) |
H13A—C13—H13B | 107.7 | O1—Ni1—N1 | 88.16 (7) |
N4—C14—C13 | 111.35 (17) | N4—Ni1—N1 | 92.23 (7) |
N4—C14—H14A | 109.4 | O5—Ni1—N1 | 86.03 (6) |
C13—C14—H14A | 109.4 | N3—Ni1—N1 | 174.08 (6) |
N4—C14—H14B | 109.4 | ||
N1—C1—C2—C3 | −1.4 (5) | C13—C12—N3—C8 | 174.5 (2) |
C1—C2—C3—C4 | −0.5 (5) | C11—C12—N3—Ni1 | 164.32 (16) |
C2—C3—C4—C5 | 1.9 (5) | C13—C12—N3—Ni1 | −17.4 (3) |
C3—C4—C5—N1 | −1.5 (4) | C13—C14—N4—Ni1 | −48.4 (2) |
C3—C4—C5—C6 | 179.7 (3) | C15i—C15—O1—Ni1 | −148.2 (2) |
N1—C5—C6—C7 | −40.5 (3) | C16—C15—O1—Ni1 | 33.2 (4) |
C4—C5—C6—C7 | 138.4 (2) | C7—N2—Ni1—N4 | −85.75 (15) |
C5—C6—C7—N2 | 79.8 (3) | C7—N2—Ni1—O5 | 92.66 (15) |
N3—C8—C9—C10 | 0.4 (4) | C7—N2—Ni1—N3 | −176.77 (14) |
C8—C9—C10—C11 | −1.3 (4) | C7—N2—Ni1—N1 | 6.59 (15) |
C9—C10—C11—C12 | −0.3 (4) | C15—O1—Ni1—N4 | 168.45 (19) |
C10—C11—C12—N3 | 2.9 (3) | C15—O1—Ni1—O5 | −9.92 (19) |
C10—C11—C12—C13 | −175.3 (2) | C15—O1—Ni1—N3 | −100.47 (19) |
N3—C12—C13—C14 | −42.1 (3) | C15—O1—Ni1—N1 | 76.12 (19) |
C11—C12—C13—C14 | 136.1 (2) | C14—N4—Ni1—N2 | −92.56 (16) |
C12—C13—C14—N4 | 80.6 (2) | C14—N4—Ni1—O1 | 86.78 (16) |
O1—C15—C16—O2 | −2.4 (5) | C14—N4—Ni1—N3 | −0.16 (16) |
C15i—C15—C16—O2 | 178.7 (3) | C14—N4—Ni1—N1 | 174.82 (16) |
O1—C15—C16—C16i | 178.5 (2) | C8—N3—Ni1—N2 | −64.13 (16) |
C15i—C15—C16—C16i | −0.4 (2) | C12—N3—Ni1—N2 | 127.95 (16) |
O3—C17—C18—O4 | 0.7 (4) | C8—N3—Ni1—O1 | 116.36 (16) |
C18ii—C17—C18—O4 | −179.9 (3) | C12—N3—Ni1—O1 | −51.57 (15) |
O3—C17—C18—C17ii | −179.4 (3) | C8—N3—Ni1—N4 | −156.69 (16) |
C18ii—C17—C18—C17ii | 0.0 | C12—N3—Ni1—N4 | 35.39 (16) |
C2—C1—N1—C5 | 1.8 (4) | C8—N3—Ni1—O5 | 26.81 (16) |
C2—C1—N1—Ni1 | −165.8 (2) | C12—N3—Ni1—O5 | −141.12 (16) |
C4—C5—N1—C1 | −0.4 (3) | C1—N1—Ni1—N2 | −164.45 (17) |
C6—C5—N1—C1 | 178.5 (2) | C5—N1—Ni1—N2 | 28.56 (17) |
C4—C5—N1—Ni1 | 166.70 (19) | C1—N1—Ni1—O1 | 15.11 (16) |
C6—C5—N1—Ni1 | −14.4 (3) | C5—N1—Ni1—O1 | −151.88 (17) |
C6—C7—N2—Ni1 | −52.9 (2) | C1—N1—Ni1—N4 | −71.83 (17) |
C9—C8—N3—C12 | 2.1 (3) | C5—N1—Ni1—N4 | 121.19 (17) |
C9—C8—N3—Ni1 | −166.43 (19) | C1—N1—Ni1—O5 | 104.81 (17) |
C11—C12—N3—C8 | −3.7 (3) | C5—N1—Ni1—O5 | −62.18 (17) |
Symmetry codes: (i) −x, y, −z+1/2; (ii) −x+1/2, −y+3/2, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O4iii | 0.81 (3) | 1.93 (3) | 2.716 (2) | 163 (3) |
N2—H2A···O3iii | 0.90 (2) | 2.09 (2) | 2.935 (2) | 157 (2) |
O5—H5B···O2 | 0.81 (3) | 1.87 (3) | 2.675 (2) | 172 (3) |
N4—H4B···O2iv | 0.88 (2) | 2.52 (2) | 3.078 (2) | 122.6 (18) |
N4—H4B···O6 | 0.88 (2) | 2.52 (3) | 3.350 (2) | 158 (2) |
N4—H4A···O4v | 0.86 (2) | 2.27 (2) | 3.091 (2) | 161 (2) |
N2—H2B···O3vi | 0.83 (2) | 2.14 (3) | 2.963 (2) | 169 (2) |
Symmetry codes: (iii) x, −y+2, z+1/2; (iv) x, y−1, z; (v) x, −y+1, z+1/2; (vi) −x+1/2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni2(C4O4)(C7H10N2)4(H2O)2]C4O4·0.25H2O |
Mr | 870.16 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 297 |
a, b, c (Å) | 28.037 (3), 8.0409 (5), 17.7752 (16) |
β (°) | 103.572 (7) |
V (Å3) | 3895.3 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.03 |
Crystal size (mm) | 0.3 × 0.2 × 0.1 |
Data collection | |
Diffractometer | Stoe IPDS-II diffractometer |
Absorption correction | Integration (X-RED32; Stoe & Cie, 2002) |
Tmin, Tmax | 0.49, 0.81 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12243, 3809, 3148 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.073, 1.03 |
No. of reflections | 3809 |
No. of parameters | 282 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.29, −0.26 |
Computer programs: X-AREA (Stoe & Cie, 2002), X-RED32 (Stoe & Cie, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPIII (Burnett & Johnson, 1996), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5A···O4i | 0.81 (3) | 1.93 (3) | 2.716 (2) | 163 (3) |
N2—H2A···O3i | 0.90 (2) | 2.09 (2) | 2.935 (2) | 157 (2) |
O5—H5B···O2 | 0.81 (3) | 1.87 (3) | 2.675 (2) | 172 (3) |
N4—H4B···O2ii | 0.88 (2) | 2.52 (2) | 3.078 (2) | 122.6 (18) |
N4—H4B···O6 | 0.88 (2) | 2.52 (3) | 3.350 (2) | 158 (2) |
N4—H4A···O4iii | 0.86 (2) | 2.27 (2) | 3.091 (2) | 161 (2) |
N2—H2B···O3iv | 0.83 (2) | 2.14 (3) | 2.963 (2) | 169 (2) |
Symmetry codes: (i) x, −y+2, z+1/2; (ii) x, y−1, z; (iii) x, −y+1, z+1/2; (iv) −x+1/2, y−1/2, −z+1/2. |
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Squarate acts as a bridge between two or more metal atoms in mono- or polydentate coordination modes when acting as a ligand towards first row transition metal ions [Trombe et al., 2002; Milet et al., 2003]. It coordinates to Fe(II), Fe(III), NiII and Cu(II) complexes in a µ-1,3 fashion, giving binuclear [Bernardinelli et al., 1989; Lee et al., 1996] and chain structures [Solans et al., 1990; Yang et al.,2003], whereas the µ-1,2 coordination mode has been reported for binuclear and chain complexes of Cu(II) and Pd(II) [Castro et al., 1997; Crispini et al., 2000]. It is also observed that the squarate anion, with Cu(II) and NiII, acts as a tetramonodentate ligand and forms polynuclear compounds [Castro et al., 1995].
In our ongoing research on squaric acid, we have synthesized some mixed–ligand metal(II) complexes of squaric acid, and their structures have been reported [Uçar et al., 2006; Uçar et al. 2007;]. In these compounds, squaric acid behaves as a monodentate ligand [Bulut et al., 2004] or acts as both a monodentate and bidentate ligand, or has a µ-1,3 coordination, while in this study, it has µ-1,2 bis(monodentate) coordination between the metal ions.
The title compound consists of an apparently centrosymmetric binuclear [Ni2(aepy)4(H2O)2(C4O4)]2+ [aepy: 2(2-aminoethyl)pyridine] complex cation, one squarate counter anion (C4O4)2-and 0.25 water molecule. In the crystal structure one of the squarates adopts a bridging position between the metal atoms, coordinating via two of its O atoms in a µ-1,2 fashion, forming a dimeric metal unit, while the other squarate acts as a counter anion (Fig.1). The geometry about NiII ion centre is a slightly distorted octahedron, the six coordination sites being occupied by four N atoms from two chelating aepy ligands and two O atoms from squarate and aqua ligands. The observed Ni1–N, Ni1–O bond distances and N–Ni1–N, N–Ni1–O and O–Ni1–O bond angles are generally consistent with those observed in related NiII squarate complexes [Uçar, 2008; Kirchmaier et al., 2003].
The crystal packing is formed by intermolecular hydrogen bonding interactions (Fig. 2). The aqua ligands and amine hydrogen atoms link the complex cation to counter the squarate anion through hydrogen bonding interactions. The intradimer Ni1(II)···Ni1 (-x, y, -z + 1/2) distance is 7.1442 (7) Å.