organic compounds
6,7,9,10-Tetrahydro-16,22-ethanooxyethano-5,8,11,19-tetraoxa-16,22-diazadibenzo[h,q]cyclooctadecine-17,21-dione: a benzylannelated macrobicyclic diamide
aDepartment of Chemistry, Point Loma Nazarene University, 3900 Lomaland Dr., Rohr Science 305E, San Diego, CA 92106, USA, and bDepartment of Chemistry and Biochemistry, University of Oklahoma, 620 Parrington Oval, Room 208, Norman, OK 73019-3051, USA
*Correspondence e-mail: garysmith@pointloma.edu
The macrobicyclic title compound, C24H28N2O7, has two tertiary diamide bridgehead atoms and is composed of a 12-membered ring (N2O2 donor set) and two 18-membered rings (N2O4 donor sets). The solid-state structure shows that each of the amide groups is not coplanar with the adjacent benzene ring and NMR studies indicate that this conformational relationship persists in solution.
Related literature
For general background, see: Dietrich et al. (1969); Tummler et al. (1977); Niklas et al. (2004); Schickaneder et al. (2006); Lehn (1973). For related structures, see: Tarnowska et al. (2004); Smith et al. (2007). For the synthesis, see: Dietrich et al. (1973). For NMR studies, see: Smith et al. (2007); Silverstein & Webster (1998).
Experimental
Crystal data
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808030067/pk2117sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808030067/pk2117Isup2.hkl
Compound (I) was obtained from the reaction of the monocyclic diamine (Smith et al., 2007) (3.8 mM) in CH2Cl2 containing pyridine (15 mM) and the 2,2'-oxydiacetyl chloride solution (4.3 mM) in CH2Cl2 under high dilution conditions (Dietrich et al., 1973). The crude diamide was purified by flash δ 3.66, 3.83 (m, 4H, NCH2CH2), 3,71, 4.44 (m, 4H, NCH2), 3.85,3.96 (m, 4H, ArOCH2CH2), 4.17 (m, 4H, ArOCH2), 4.39, 4.52 (m,4H, C(?O)CH2), 6.96 - 7.25 (m, 8H, Ar); ESI-MS: m/z = 457.3 (M + H+) and 479.3 (M + Na+). Crystals suitable for X-ray crystallography were grown by vapor diffusion of MeOH into a solution of (I) in CH2Cl2.
on silica gel using CH2Cl2 and MeOH (0–10%) as the Spectroscopic Analysis: 1H-NMR (CDCl3, 300 MHz)H atoms were positioned goemetrically and refined using a riding model with C—H = 0.95Å for aromatic carbons and 0.99Å for methylene carbons.
Data collection: SMART (Bruker, 1998); cell
SMART (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), showing the atom-numbering scheme. Displacement ellipsoids are drawn at the 50% probability level. |
C24H28N2O7 | F(000) = 968 |
Mr = 456.48 | Dx = 1.368 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 7313 reflections |
a = 15.125 (2) Å | θ = 2.6–28.2° |
b = 9.3901 (14) Å | µ = 0.10 mm−1 |
c = 16.446 (2) Å | T = 87 K |
β = 108.416 (5)° | Block, colorless |
V = 2216.1 (5) Å3 | 0.58 × 0.56 × 0.52 mm |
Z = 4 |
Bruker APEX diffractometer | 4352 independent reflections |
Radiation source: fine-focus sealed tube | 4142 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
Detector resolution: 8.366 pixels mm-1 | θmax = 26.0°, θmin = 2.2° |
ω scans | h = −18→18 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) | k = −11→11 |
Tmin = 0.940, Tmax = 0.950 | l = −20→20 |
23465 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0451P)2 + 0.7509P] where P = (Fo2 + 2Fc2)/3 |
4352 reflections | (Δ/σ)max = 0.001 |
298 parameters | Δρmax = 0.24 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
C24H28N2O7 | V = 2216.1 (5) Å3 |
Mr = 456.48 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 15.125 (2) Å | µ = 0.10 mm−1 |
b = 9.3901 (14) Å | T = 87 K |
c = 16.446 (2) Å | 0.58 × 0.56 × 0.52 mm |
β = 108.416 (5)° |
Bruker APEX diffractometer | 4352 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) | 4142 reflections with I > 2σ(I) |
Tmin = 0.940, Tmax = 0.950 | Rint = 0.020 |
23465 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.085 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.24 e Å−3 |
4352 reflections | Δρmin = −0.23 e Å−3 |
298 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.64508 (5) | 0.74748 (8) | 0.62300 (5) | 0.02150 (17) | |
O2 | 0.59736 (5) | 0.89145 (8) | 0.45462 (5) | 0.02121 (17) | |
O3 | 0.64605 (5) | 0.75428 (8) | 0.31729 (5) | 0.02270 (17) | |
O4 | 0.57879 (5) | 0.34635 (8) | 0.45980 (5) | 0.02311 (17) | |
O5 | 0.84403 (5) | 0.62786 (8) | 0.72596 (5) | 0.02390 (17) | |
O6 | 0.81395 (5) | 0.53553 (8) | 0.52618 (5) | 0.02129 (17) | |
O7 | 0.85667 (5) | 0.62395 (8) | 0.34044 (5) | 0.02538 (18) | |
N1 | 0.72291 (6) | 0.48401 (9) | 0.65874 (5) | 0.01944 (19) | |
N2 | 0.72987 (6) | 0.49648 (9) | 0.34218 (6) | 0.02010 (19) | |
C1 | 0.66837 (7) | 0.54166 (11) | 0.70866 (6) | 0.0198 (2) | |
C2 | 0.65342 (8) | 0.46203 (12) | 0.77389 (7) | 0.0240 (2) | |
H2 | 0.6820 | 0.3713 | 0.7877 | 0.029* | |
C3 | 0.59674 (8) | 0.51404 (12) | 0.81940 (7) | 0.0265 (2) | |
H3 | 0.5869 | 0.4593 | 0.8644 | 0.032* | |
C4 | 0.55497 (8) | 0.64576 (12) | 0.79873 (7) | 0.0249 (2) | |
H4 | 0.5157 | 0.6810 | 0.8292 | 0.030* | |
C5 | 0.56994 (7) | 0.72721 (12) | 0.73368 (7) | 0.0224 (2) | |
H5 | 0.5413 | 0.8180 | 0.7203 | 0.027* | |
C6 | 0.62683 (7) | 0.67631 (11) | 0.68798 (6) | 0.0193 (2) | |
C7 | 0.60204 (8) | 0.88484 (11) | 0.60179 (7) | 0.0219 (2) | |
H7A | 0.6167 | 0.9449 | 0.6539 | 0.026* | |
H7B | 0.5335 | 0.8740 | 0.5785 | 0.026* | |
C8 | 0.63801 (8) | 0.95395 (11) | 0.53658 (7) | 0.0232 (2) | |
H8A | 0.6234 | 1.0570 | 0.5336 | 0.028* | |
H8B | 0.7066 | 0.9433 | 0.5540 | 0.028* | |
C9 | 0.63046 (8) | 0.96135 (11) | 0.39353 (7) | 0.0228 (2) | |
H9A | 0.6994 | 0.9624 | 0.4140 | 0.027* | |
H9B | 0.6084 | 1.0612 | 0.3869 | 0.027* | |
C10 | 0.59670 (8) | 0.88731 (11) | 0.30861 (7) | 0.0233 (2) | |
H10A | 0.5288 | 0.8700 | 0.2924 | 0.028* | |
H10B | 0.6092 | 0.9465 | 0.2637 | 0.028* | |
C11 | 0.68585 (7) | 0.35454 (11) | 0.60899 (7) | 0.0217 (2) | |
H11A | 0.6858 | 0.2759 | 0.6491 | 0.026* | |
H11B | 0.7275 | 0.3269 | 0.5758 | 0.026* | |
C12 | 0.58634 (7) | 0.37445 (12) | 0.54701 (7) | 0.0224 (2) | |
H12A | 0.5437 | 0.3100 | 0.5644 | 0.027* | |
H12B | 0.5660 | 0.4735 | 0.5517 | 0.027* | |
C13 | 0.61408 (7) | 0.45732 (11) | 0.41885 (7) | 0.0219 (2) | |
H13A | 0.6441 | 0.5322 | 0.4609 | 0.026* | |
H13B | 0.5626 | 0.5012 | 0.3726 | 0.026* | |
C14 | 0.68495 (7) | 0.39065 (11) | 0.38188 (7) | 0.0219 (2) | |
H14A | 0.7333 | 0.3411 | 0.4282 | 0.026* | |
H14B | 0.6533 | 0.3187 | 0.3384 | 0.026* | |
C15 | 0.80862 (7) | 0.53954 (11) | 0.67021 (7) | 0.0200 (2) | |
C16 | 0.86233 (7) | 0.49116 (12) | 0.61103 (7) | 0.0233 (2) | |
H16A | 0.9256 | 0.5330 | 0.6299 | 0.028* | |
H16B | 0.8685 | 0.3862 | 0.6131 | 0.028* | |
C17 | 0.86817 (7) | 0.50959 (12) | 0.47159 (7) | 0.0235 (2) | |
H17A | 0.8851 | 0.4074 | 0.4745 | 0.028* | |
H17B | 0.9266 | 0.5654 | 0.4919 | 0.028* | |
C18 | 0.81667 (7) | 0.54926 (11) | 0.37915 (7) | 0.0206 (2) | |
C19 | 0.67883 (7) | 0.54321 (11) | 0.25679 (7) | 0.0203 (2) | |
C20 | 0.67082 (7) | 0.45530 (12) | 0.18772 (7) | 0.0241 (2) | |
H20 | 0.6996 | 0.3642 | 0.1965 | 0.029* | |
C21 | 0.62088 (8) | 0.49929 (13) | 0.10519 (7) | 0.0270 (2) | |
H21 | 0.6153 | 0.4385 | 0.0576 | 0.032* | |
C22 | 0.57953 (8) | 0.63187 (13) | 0.09301 (7) | 0.0262 (2) | |
H22 | 0.5462 | 0.6627 | 0.0366 | 0.031* | |
C23 | 0.58607 (7) | 0.72109 (12) | 0.16232 (7) | 0.0243 (2) | |
H23 | 0.5569 | 0.8119 | 0.1531 | 0.029* | |
C24 | 0.63543 (7) | 0.67709 (11) | 0.24507 (7) | 0.0207 (2) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0234 (4) | 0.0199 (4) | 0.0218 (4) | 0.0037 (3) | 0.0079 (3) | 0.0030 (3) |
O2 | 0.0234 (4) | 0.0210 (4) | 0.0195 (4) | −0.0021 (3) | 0.0071 (3) | −0.0003 (3) |
O3 | 0.0257 (4) | 0.0211 (4) | 0.0209 (4) | 0.0051 (3) | 0.0067 (3) | 0.0006 (3) |
O4 | 0.0239 (4) | 0.0256 (4) | 0.0195 (4) | −0.0087 (3) | 0.0064 (3) | −0.0022 (3) |
O5 | 0.0218 (4) | 0.0226 (4) | 0.0245 (4) | −0.0028 (3) | 0.0034 (3) | −0.0016 (3) |
O6 | 0.0177 (3) | 0.0262 (4) | 0.0196 (4) | 0.0040 (3) | 0.0055 (3) | 0.0019 (3) |
O7 | 0.0231 (4) | 0.0266 (4) | 0.0282 (4) | −0.0026 (3) | 0.0105 (3) | 0.0011 (3) |
N1 | 0.0182 (4) | 0.0184 (4) | 0.0203 (4) | −0.0004 (3) | 0.0040 (3) | −0.0012 (3) |
N2 | 0.0188 (4) | 0.0201 (4) | 0.0217 (4) | 0.0006 (3) | 0.0068 (4) | 0.0016 (3) |
C1 | 0.0174 (5) | 0.0209 (5) | 0.0191 (5) | −0.0032 (4) | 0.0030 (4) | −0.0029 (4) |
C2 | 0.0240 (5) | 0.0215 (5) | 0.0241 (5) | −0.0041 (4) | 0.0043 (4) | 0.0005 (4) |
C3 | 0.0278 (6) | 0.0297 (6) | 0.0225 (5) | −0.0089 (5) | 0.0086 (4) | 0.0004 (4) |
C4 | 0.0210 (5) | 0.0315 (6) | 0.0229 (5) | −0.0066 (4) | 0.0078 (4) | −0.0069 (4) |
C5 | 0.0198 (5) | 0.0239 (5) | 0.0217 (5) | −0.0005 (4) | 0.0037 (4) | −0.0035 (4) |
C6 | 0.0171 (5) | 0.0216 (5) | 0.0170 (5) | −0.0034 (4) | 0.0023 (4) | −0.0015 (4) |
C7 | 0.0250 (5) | 0.0183 (5) | 0.0207 (5) | 0.0037 (4) | 0.0047 (4) | −0.0008 (4) |
C8 | 0.0261 (5) | 0.0186 (5) | 0.0221 (5) | −0.0018 (4) | 0.0035 (4) | −0.0014 (4) |
C9 | 0.0248 (5) | 0.0195 (5) | 0.0271 (6) | 0.0012 (4) | 0.0127 (4) | 0.0026 (4) |
C10 | 0.0248 (5) | 0.0221 (5) | 0.0246 (5) | 0.0062 (4) | 0.0101 (4) | 0.0043 (4) |
C11 | 0.0231 (5) | 0.0181 (5) | 0.0220 (5) | −0.0001 (4) | 0.0043 (4) | −0.0021 (4) |
C12 | 0.0204 (5) | 0.0266 (5) | 0.0201 (5) | −0.0034 (4) | 0.0062 (4) | −0.0018 (4) |
C13 | 0.0191 (5) | 0.0224 (5) | 0.0234 (5) | −0.0018 (4) | 0.0057 (4) | 0.0022 (4) |
C14 | 0.0220 (5) | 0.0189 (5) | 0.0246 (5) | −0.0016 (4) | 0.0071 (4) | 0.0013 (4) |
C15 | 0.0186 (5) | 0.0191 (5) | 0.0196 (5) | 0.0021 (4) | 0.0022 (4) | 0.0041 (4) |
C16 | 0.0174 (5) | 0.0291 (6) | 0.0210 (5) | 0.0028 (4) | 0.0026 (4) | 0.0025 (4) |
C17 | 0.0179 (5) | 0.0282 (6) | 0.0245 (5) | 0.0034 (4) | 0.0070 (4) | 0.0001 (4) |
C18 | 0.0194 (5) | 0.0193 (5) | 0.0245 (5) | 0.0024 (4) | 0.0087 (4) | −0.0015 (4) |
C19 | 0.0161 (5) | 0.0233 (5) | 0.0221 (5) | −0.0024 (4) | 0.0068 (4) | 0.0011 (4) |
C20 | 0.0200 (5) | 0.0246 (5) | 0.0291 (6) | −0.0017 (4) | 0.0098 (4) | −0.0033 (4) |
C21 | 0.0240 (5) | 0.0335 (6) | 0.0244 (5) | −0.0070 (5) | 0.0090 (4) | −0.0072 (5) |
C22 | 0.0224 (5) | 0.0350 (6) | 0.0202 (5) | −0.0047 (5) | 0.0052 (4) | 0.0018 (4) |
C23 | 0.0217 (5) | 0.0263 (5) | 0.0251 (5) | 0.0003 (4) | 0.0076 (4) | 0.0033 (4) |
C24 | 0.0182 (5) | 0.0236 (5) | 0.0218 (5) | −0.0023 (4) | 0.0085 (4) | −0.0003 (4) |
O1—C6 | 1.3606 (13) | C8—H8B | 0.9900 |
O1—C7 | 1.4373 (12) | C9—C10 | 1.4979 (15) |
O2—C9 | 1.4173 (12) | C9—H9A | 0.9900 |
O2—C8 | 1.4197 (12) | C9—H9B | 0.9900 |
O3—C24 | 1.3570 (13) | C10—H10A | 0.9900 |
O3—C10 | 1.4390 (12) | C10—H10B | 0.9900 |
O4—C12 | 1.4270 (12) | C11—C12 | 1.5395 (14) |
O4—C13 | 1.4323 (13) | C11—H11A | 0.9900 |
O5—C15 | 1.2268 (13) | C11—H11B | 0.9900 |
O6—C17 | 1.4151 (12) | C12—H12A | 0.9900 |
O6—C16 | 1.4181 (12) | C12—H12B | 0.9900 |
O7—C18 | 1.2274 (13) | C13—C14 | 1.5238 (15) |
N1—C15 | 1.3540 (14) | C13—H13A | 0.9900 |
N1—C1 | 1.4407 (13) | C13—H13B | 0.9900 |
N1—C11 | 1.4738 (13) | C14—H14A | 0.9900 |
N2—C18 | 1.3544 (14) | C14—H14B | 0.9900 |
N2—C19 | 1.4408 (13) | C15—C16 | 1.5211 (15) |
N2—C14 | 1.4683 (13) | C16—H16A | 0.9900 |
C1—C2 | 1.3835 (15) | C16—H16B | 0.9900 |
C1—C6 | 1.4050 (15) | C17—C18 | 1.5195 (15) |
C2—C3 | 1.3925 (16) | C17—H17A | 0.9900 |
C2—H2 | 0.9500 | C17—H17B | 0.9900 |
C3—C4 | 1.3815 (17) | C19—C20 | 1.3782 (15) |
C3—H3 | 0.9500 | C19—C24 | 1.4030 (15) |
C4—C5 | 1.3906 (16) | C20—C21 | 1.3914 (16) |
C4—H4 | 0.9500 | C20—H20 | 0.9500 |
C5—C6 | 1.3937 (15) | C21—C22 | 1.3792 (17) |
C5—H5 | 0.9500 | C21—H21 | 0.9500 |
C7—C8 | 1.4953 (15) | C22—C23 | 1.3927 (16) |
C7—H7A | 0.9900 | C22—H22 | 0.9500 |
C7—H7B | 0.9900 | C23—C24 | 1.3923 (15) |
C8—H8A | 0.9900 | C23—H23 | 0.9500 |
C6—O1—C7 | 116.27 (8) | C12—C11—H11B | 109.0 |
C9—O2—C8 | 109.73 (8) | H11A—C11—H11B | 107.8 |
C24—O3—C10 | 117.56 (8) | O4—C12—C11 | 113.21 (9) |
C12—O4—C13 | 114.50 (8) | O4—C12—H12A | 108.9 |
C17—O6—C16 | 110.57 (8) | C11—C12—H12A | 108.9 |
C15—N1—C1 | 118.12 (9) | O4—C12—H12B | 108.9 |
C15—N1—C11 | 125.07 (9) | C11—C12—H12B | 108.9 |
C1—N1—C11 | 116.13 (8) | H12A—C12—H12B | 107.7 |
C18—N2—C19 | 118.10 (9) | O4—C13—C14 | 107.60 (8) |
C18—N2—C14 | 124.55 (9) | O4—C13—H13A | 110.2 |
C19—N2—C14 | 117.31 (8) | C14—C13—H13A | 110.2 |
C2—C1—C6 | 120.26 (10) | O4—C13—H13B | 110.2 |
C2—C1—N1 | 120.14 (10) | C14—C13—H13B | 110.2 |
C6—C1—N1 | 119.53 (9) | H13A—C13—H13B | 108.5 |
C1—C2—C3 | 120.42 (10) | N2—C14—C13 | 112.46 (8) |
C1—C2—H2 | 119.8 | N2—C14—H14A | 109.1 |
C3—C2—H2 | 119.8 | C13—C14—H14A | 109.1 |
C4—C3—C2 | 119.54 (10) | N2—C14—H14B | 109.1 |
C4—C3—H3 | 120.2 | C13—C14—H14B | 109.1 |
C2—C3—H3 | 120.2 | H14A—C14—H14B | 107.8 |
C3—C4—C5 | 120.58 (10) | O5—C15—N1 | 122.50 (10) |
C3—C4—H4 | 119.7 | O5—C15—C16 | 119.00 (9) |
C5—C4—H4 | 119.7 | N1—C15—C16 | 118.50 (9) |
C4—C5—C6 | 120.30 (10) | O6—C16—C15 | 109.15 (8) |
C4—C5—H5 | 119.8 | O6—C16—H16A | 109.9 |
C6—C5—H5 | 119.8 | C15—C16—H16A | 109.9 |
O1—C6—C5 | 124.62 (9) | O6—C16—H16B | 109.9 |
O1—C6—C1 | 116.48 (9) | C15—C16—H16B | 109.9 |
C5—C6—C1 | 118.89 (10) | H16A—C16—H16B | 108.3 |
O1—C7—C8 | 108.90 (9) | O6—C17—C18 | 112.08 (8) |
O1—C7—H7A | 109.9 | O6—C17—H17A | 109.2 |
C8—C7—H7A | 109.9 | C18—C17—H17A | 109.2 |
O1—C7—H7B | 109.9 | O6—C17—H17B | 109.2 |
C8—C7—H7B | 109.9 | C18—C17—H17B | 109.2 |
H7A—C7—H7B | 108.3 | H17A—C17—H17B | 107.9 |
O2—C8—C7 | 110.79 (9) | O7—C18—N2 | 122.89 (10) |
O2—C8—H8A | 109.5 | O7—C18—C17 | 118.56 (9) |
C7—C8—H8A | 109.5 | N2—C18—C17 | 118.51 (9) |
O2—C8—H8B | 109.5 | C20—C19—C24 | 120.53 (10) |
C7—C8—H8B | 109.5 | C20—C19—N2 | 120.09 (10) |
H8A—C8—H8B | 108.1 | C24—C19—N2 | 119.35 (9) |
O2—C9—C10 | 110.69 (9) | C19—C20—C21 | 120.36 (11) |
O2—C9—H9A | 109.5 | C19—C20—H20 | 119.8 |
C10—C9—H9A | 109.5 | C21—C20—H20 | 119.8 |
O2—C9—H9B | 109.5 | C22—C21—C20 | 119.42 (10) |
C10—C9—H9B | 109.5 | C22—C21—H21 | 120.3 |
H9A—C9—H9B | 108.1 | C20—C21—H21 | 120.3 |
O3—C10—C9 | 107.28 (8) | C21—C22—C23 | 120.83 (10) |
O3—C10—H10A | 110.3 | C21—C22—H22 | 119.6 |
C9—C10—H10A | 110.3 | C23—C22—H22 | 119.6 |
O3—C10—H10B | 110.3 | C24—C23—C22 | 119.93 (11) |
C9—C10—H10B | 110.3 | C24—C23—H23 | 120.0 |
H10A—C10—H10B | 108.5 | C22—C23—H23 | 120.0 |
N1—C11—C12 | 112.85 (8) | O3—C24—C23 | 125.15 (10) |
N1—C11—H11A | 109.0 | O3—C24—C19 | 115.95 (9) |
C12—C11—H11A | 109.0 | C23—C24—C19 | 118.90 (10) |
N1—C11—H11B | 109.0 | ||
C15—N1—C1—C2 | −108.91 (11) | C1—N1—C15—O5 | 6.14 (15) |
C11—N1—C1—C2 | 62.11 (12) | C11—N1—C15—O5 | −164.00 (9) |
C15—N1—C1—C6 | 74.13 (12) | C1—N1—C15—C16 | −173.30 (9) |
C11—N1—C1—C6 | −114.85 (10) | C11—N1—C15—C16 | 16.55 (14) |
C6—C1—C2—C3 | 0.33 (16) | C17—O6—C16—C15 | 171.97 (8) |
N1—C1—C2—C3 | −176.61 (9) | O5—C15—C16—O6 | −114.72 (10) |
C1—C2—C3—C4 | 0.33 (16) | N1—C15—C16—O6 | 64.74 (12) |
C2—C3—C4—C5 | −0.75 (16) | C16—O6—C17—C18 | 177.25 (9) |
C3—C4—C5—C6 | 0.51 (16) | C19—N2—C18—O7 | −7.04 (15) |
C7—O1—C6—C5 | 0.33 (14) | C14—N2—C18—O7 | 170.73 (10) |
C7—O1—C6—C1 | 179.68 (8) | C19—N2—C18—C17 | 175.37 (9) |
C4—C5—C6—O1 | 179.49 (9) | C14—N2—C18—C17 | −6.86 (15) |
C4—C5—C6—C1 | 0.15 (15) | O6—C17—C18—O7 | 130.66 (10) |
C2—C1—C6—O1 | −179.96 (9) | O6—C17—C18—N2 | −51.64 (13) |
N1—C1—C6—O1 | −3.01 (13) | C18—N2—C19—C20 | 103.13 (12) |
C2—C1—C6—C5 | −0.57 (15) | C14—N2—C19—C20 | −74.81 (12) |
N1—C1—C6—C5 | 176.39 (9) | C18—N2—C19—C24 | −78.59 (12) |
C6—O1—C7—C8 | 173.66 (8) | C14—N2—C19—C24 | 103.47 (11) |
C9—O2—C8—C7 | 178.33 (8) | C24—C19—C20—C21 | 1.14 (16) |
O1—C7—C8—O2 | 75.03 (10) | N2—C19—C20—C21 | 179.40 (9) |
C8—O2—C9—C10 | 173.86 (8) | C19—C20—C21—C22 | 0.11 (16) |
C24—O3—C10—C9 | −171.74 (8) | C20—C21—C22—C23 | −0.92 (16) |
O2—C9—C10—O3 | −71.12 (10) | C21—C22—C23—C24 | 0.48 (16) |
C15—N1—C11—C12 | −133.07 (10) | C10—O3—C24—C23 | 5.01 (15) |
C1—N1—C11—C12 | 56.61 (12) | C10—O3—C24—C19 | −175.35 (9) |
C13—O4—C12—C11 | −76.49 (11) | C22—C23—C24—O3 | −179.61 (10) |
N1—C11—C12—O4 | 122.34 (10) | C22—C23—C24—C19 | 0.76 (15) |
C12—O4—C13—C14 | 125.90 (9) | C20—C19—C24—O3 | 178.77 (9) |
C18—N2—C14—C13 | 101.99 (11) | N2—C19—C24—O3 | 0.50 (13) |
C19—N2—C14—C13 | −80.22 (11) | C20—C19—C24—C23 | −1.56 (15) |
O4—C13—C14—N2 | −176.83 (8) | N2—C19—C24—C23 | −179.83 (9) |
Experimental details
Crystal data | |
Chemical formula | C24H28N2O7 |
Mr | 456.48 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 87 |
a, b, c (Å) | 15.125 (2), 9.3901 (14), 16.446 (2) |
β (°) | 108.416 (5) |
V (Å3) | 2216.1 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.58 × 0.56 × 0.52 |
Data collection | |
Diffractometer | Bruker APEX diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2007) |
Tmin, Tmax | 0.940, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 23465, 4352, 4142 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.085, 1.03 |
No. of reflections | 4352 |
No. of parameters | 298 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.24, −0.23 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXTL (Sheldrick, 2008).
Acknowledgements
This work was supported by the Oklahoma Center for the Advancement of Science and Technology (grant HR00–030) and the National Institutes of Health (grant GM66206). The authors thank the National Science Foundation (CHE-0130835) and the University of Oklahoma for funds to acquire the diffractometer and computers used in this work.
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Cryptands (Dietrich et al., 1969; Lehn, 1973) and tertiary amides (Tummler et al., 1977; Niklas et al., 2004; Schickaneder et al., 2006) are of interest as hosts for cationic guests. The title compound, (I), was isolated during the synthesis of the corresponding benzoannelated cryptand. A related macrobicyclic diamide without benzene rings has been reported, but the carbonyl groups are on the bridge containing the three ether O atoms (Tarnowska et al., 2004).
Fig. 1 shows that (I) consists of a 12-membered ring (N1, O4, N2, O6) and two 18-membered rings (N1, O1, O2, O3, N2, (O4 or O6)). With respect to the molecular cavity formed by these rings, donor atoms O1, O2, O3, O6, N1, and N2 have an endodentate orientation while O4 and carbonyl oxygen atoms O5 and O7 are exodentate. The donor atoms shared by the 18-membered rings (N1, O1, O2, O3, N2) form a plane (average deviation = 0.0244 Å) that is almost perpendicular (dihedral angle = 92.8 (2)°) to the plane defined by the donor atoms from the 12-membered ring (N1, O4, N2, O6; average deviation = 0.0995 Å). The planar amide groups (N1, C15, O5, C16; average deviation = 0.0014 Å), (N2, C18, O7, C17; average deviation = 0.0060 Å) form dihedral angles of 86.4 (2) and 99.0 (2)° with benzene rings 1 and 2, respectively.
In this conformation the distances between protons H2 and H20 and the carbonyl O atoms (O5 and O7) are 3.70Å and 3.80 Å, respectively. In the solid-state structure of the analogous monocyclic diamide (i.e., donor atoms N1, O1, O2, O3, N2, O6), each amide group and adjacent benzene ring are nearly co-planar (dihedral angles = 14.3 (2)°, 17.1 (2)°) and the distances between protons analogous to H2 and H20 to the adjacent carbonyl O atoms are between 2.29Å and 2.40Å (Smith et al., 2006). In CDCl3, the 1H chemical shift values of the aromatic protons of (I) lie in the expected range from 6.96 - 7.25 p.p.m. (Silverstein & Webster, 1998); however, for the corresponding monocyclic diamide, the ortho protons are shifted downfield to 8.22 p.p.m. due to deshielding by the adjacent carbonyl O atoms. The X-ray structure and NMR chemical shift data for (I) indicate that the presence of the ethanooxyethano bridging strand prevents the amide and benzene groups from adopting a coplanar conformation both in the solid state and in solution.