metal-organic compounds
Triaqua(N2,N4-di-2-pyridylpyrimidine-2,4-diamine)cobalt(II) fumarate
aDepartment of Chemistry, Lishui University, Lishui 323000, People's Republic of China
*Correspondence e-mail: zjlsxyhx@126.com
The Co atom in the title compound, [Co(C14H12N6)(H2O)3]C4H2O4, has a mer-CoN3O3 octahedral coordination arising from the tridentate N2,N4-di-2-pyridylpyrimidine-2,4-diamine (tpda) ligand and three coordinated water molecules. The contains two fumarate half-anions, both completed by inversion symmetry. A network of N—H⋯O and O—H⋯O hydrogen bonds leads to a three-dimensional network in the crystal structure.
Related literature
For a related structure, see: Fang et al. (2005). For background, see: Sheu et al. (1996); Peng et al. (2000).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1999); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808032613/hb2798sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808032613/hb2798Isup2.hkl
Tpda (0.025 g, 0.07 mmol), Co(NO3)2 (0.026 g, 0.1 mmol), fumaric acid (0.023 g, 0.09 mmol) and NaOH (0.041 g, 0.1 mmol) were mixed in acetonitrile, and the mixture was heated for six hours under reflux with stirring. The resultant was then filtered to give a solution which was infiltrated by diethyl ether in a closed vessel, one week later some pink blocks of (I) were obtained.
The water H atoms were located in a difference map and refined with the restraint O—H = 0.85 (1)Å and a fixed Uiso value of 0.08Å2. The other H atoms were positioned geometrically (C—H = 0.93Å, N—H = 0.86Å) and refined as riding with Uiso(H) = 1.2Ueq(carrier).
Data collection: SMART (Bruker, 1999); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of (I), showing 50% probability displacement ellipsoids for the non-hydrogen atoms. Symmetry codes: (i) 1-x, 1-y, -z; (ii) 1-x, -y, 2-z. | |
Fig. 2. The packing diagram of (I), viewed along the a axis; hydrogen bonds are shown as dashed lines. |
[Co(C14H12N6)(H2O)3]C4H2O4 | F(000) = 1012 |
Mr = 491.33 | Dx = 1.566 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 3746 reflections |
a = 9.3239 (3) Å | θ = 2.0–25.2° |
b = 17.1115 (6) Å | µ = 0.88 mm−1 |
c = 13.1395 (5) Å | T = 298 K |
β = 96.224 (1)° | Block, pink |
V = 2084.00 (13) Å3 | 0.29 × 0.25 × 0.18 mm |
Z = 4 |
Bruker APEX CCD diffractometer | 3746 independent reflections |
Radiation source: fine-focus sealed tube | 3363 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
ω scans | θmax = 25.2°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −11→8 |
Tmin = 0.785, Tmax = 0.858 | k = −18→20 |
10365 measured reflections | l = −15→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.86 | w = 1/[σ2(Fo2) + (0.06P)2 + 0.982P] where P = (Fo2 + 2Fc2)/3 |
3746 reflections | (Δ/σ)max = 0.001 |
307 parameters | Δρmax = 0.28 e Å−3 |
9 restraints | Δρmin = −0.33 e Å−3 |
[Co(C14H12N6)(H2O)3]C4H2O4 | V = 2084.00 (13) Å3 |
Mr = 491.33 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.3239 (3) Å | µ = 0.88 mm−1 |
b = 17.1115 (6) Å | T = 298 K |
c = 13.1395 (5) Å | 0.29 × 0.25 × 0.18 mm |
β = 96.224 (1)° |
Bruker APEX CCD diffractometer | 3746 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3363 reflections with I > 2σ(I) |
Tmin = 0.785, Tmax = 0.858 | Rint = 0.014 |
10365 measured reflections |
R[F2 > 2σ(F2)] = 0.026 | 9 restraints |
wR(F2) = 0.078 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.86 | Δρmax = 0.28 e Å−3 |
3746 reflections | Δρmin = −0.33 e Å−3 |
307 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.89198 (2) | 0.212482 (12) | 0.174122 (15) | 0.02637 (9) | |
N1 | 1.07828 (17) | 0.25958 (9) | 0.12520 (12) | 0.0386 (3) | |
N2 | 1.12613 (18) | 0.14671 (9) | 0.03083 (12) | 0.0428 (4) | |
H2 | 1.1513 | 0.1318 | −0.0272 | 0.051* | |
N3 | 0.96644 (15) | 0.10180 (8) | 0.14666 (11) | 0.0311 (3) | |
N4 | 0.81107 (18) | 0.04503 (9) | 0.25721 (12) | 0.0418 (4) | |
H4A | 0.8147 | 0.0119 | 0.3066 | 0.050* | |
N5 | 0.69822 (17) | 0.16405 (10) | 0.20828 (12) | 0.0411 (4) | |
N6 | 1.1419 (2) | 0.01872 (10) | 0.08085 (15) | 0.0527 (4) | |
O1 | 0.80120 (15) | 0.22962 (8) | 0.02251 (10) | 0.0413 (3) | |
O2 | 0.98217 (16) | 0.20786 (7) | 0.32677 (10) | 0.0404 (3) | |
O3 | 0.82120 (18) | 0.31928 (8) | 0.21618 (11) | 0.0515 (4) | |
O4 | 0.31016 (15) | 0.62641 (8) | 0.05353 (10) | 0.0449 (3) | |
O5 | 0.2958 (2) | 0.57346 (11) | −0.09942 (12) | 0.0843 (7) | |
O6 | 0.56949 (16) | 0.15459 (8) | 0.92018 (12) | 0.0521 (4) | |
O7 | 0.35145 (14) | 0.10201 (8) | 0.89469 (10) | 0.0432 (3) | |
C1 | 1.1139 (3) | 0.33447 (13) | 0.14869 (18) | 0.0572 (6) | |
H1A | 1.0742 | 0.3578 | 0.2031 | 0.069* | |
C2 | 1.2052 (3) | 0.37778 (15) | 0.0965 (2) | 0.0756 (8) | |
H2A | 1.2276 | 0.4291 | 0.1152 | 0.091* | |
C3 | 1.2637 (3) | 0.34310 (15) | 0.0147 (2) | 0.0701 (7) | |
H3A | 1.3229 | 0.3718 | −0.0241 | 0.084* | |
C4 | 1.2337 (3) | 0.26690 (14) | −0.00838 (18) | 0.0548 (5) | |
H4 | 1.2728 | 0.2426 | −0.0624 | 0.066* | |
C5 | 1.1431 (2) | 0.22600 (11) | 0.05069 (14) | 0.0389 (4) | |
C6 | 1.0754 (2) | 0.08795 (10) | 0.08910 (14) | 0.0356 (4) | |
C7 | 1.0969 (2) | −0.04032 (12) | 0.13765 (18) | 0.0523 (5) | |
H7 | 1.1423 | −0.0886 | 0.1355 | 0.063* | |
C8 | 0.9887 (2) | −0.03233 (11) | 0.19754 (15) | 0.0425 (4) | |
H8 | 0.9600 | −0.0737 | 0.2365 | 0.051* | |
C9 | 0.9231 (2) | 0.03917 (10) | 0.19853 (13) | 0.0348 (4) | |
C10 | 0.6933 (2) | 0.09433 (12) | 0.25191 (15) | 0.0423 (4) | |
C11 | 0.5709 (3) | 0.06721 (17) | 0.2948 (2) | 0.0669 (7) | |
H11 | 0.5709 | 0.0186 | 0.3263 | 0.080* | |
C12 | 0.4505 (3) | 0.1148 (2) | 0.2887 (3) | 0.0845 (9) | |
H12 | 0.3688 | 0.0992 | 0.3180 | 0.101* | |
C13 | 0.4526 (3) | 0.1857 (2) | 0.2388 (2) | 0.0773 (8) | |
H13 | 0.3714 | 0.2176 | 0.2317 | 0.093* | |
C14 | 0.5759 (2) | 0.20770 (15) | 0.2004 (2) | 0.0587 (6) | |
H14 | 0.5766 | 0.2555 | 0.1667 | 0.070* | |
C15 | 0.4580 (2) | 0.51840 (11) | 0.02931 (13) | 0.0376 (4) | |
H15 | 0.4687 | 0.5068 | 0.0989 | 0.045* | |
C16 | 0.3459 (2) | 0.57780 (10) | −0.00850 (14) | 0.0362 (4) | |
C17 | 0.5353 (2) | 0.03277 (11) | 0.99689 (14) | 0.0372 (4) | |
H17 | 0.6254 | 0.0371 | 1.0344 | 0.045* | |
C18 | 0.4805 (2) | 0.10121 (10) | 0.93323 (13) | 0.0353 (4) | |
H1C | 0.782 (3) | 0.2754 (7) | 0.005 (2) | 0.080* | |
H1D | 0.733 (2) | 0.2009 (12) | 0.001 (2) | 0.080* | |
H3D | 0.785 (3) | 0.3513 (12) | 0.1732 (13) | 0.080* | |
H3C | 0.827 (3) | 0.3404 (14) | 0.2742 (9) | 0.080* | |
H2C | 1.007 (3) | 0.2514 (8) | 0.353 (2) | 0.080* | |
H2D | 1.044 (2) | 0.1753 (10) | 0.350 (2) | 0.080* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.02877 (14) | 0.02434 (14) | 0.02585 (14) | 0.00162 (8) | 0.00225 (9) | −0.00098 (8) |
N1 | 0.0415 (9) | 0.0367 (8) | 0.0378 (8) | −0.0084 (7) | 0.0053 (7) | −0.0034 (6) |
N2 | 0.0500 (10) | 0.0384 (9) | 0.0432 (9) | −0.0037 (7) | 0.0204 (7) | −0.0032 (7) |
N3 | 0.0336 (8) | 0.0285 (7) | 0.0315 (7) | −0.0020 (6) | 0.0049 (6) | −0.0015 (6) |
N4 | 0.0486 (9) | 0.0378 (8) | 0.0410 (9) | −0.0051 (7) | 0.0139 (7) | 0.0064 (7) |
N5 | 0.0344 (8) | 0.0476 (9) | 0.0419 (9) | 0.0019 (7) | 0.0063 (7) | −0.0009 (7) |
N6 | 0.0538 (11) | 0.0425 (10) | 0.0641 (11) | 0.0088 (8) | 0.0162 (9) | −0.0029 (8) |
O1 | 0.0443 (8) | 0.0391 (7) | 0.0381 (7) | −0.0007 (6) | −0.0059 (6) | 0.0020 (6) |
O2 | 0.0501 (8) | 0.0356 (7) | 0.0338 (7) | 0.0059 (6) | −0.0036 (6) | −0.0028 (5) |
O3 | 0.0763 (10) | 0.0389 (8) | 0.0367 (7) | 0.0209 (7) | −0.0056 (7) | −0.0068 (6) |
O4 | 0.0464 (8) | 0.0398 (7) | 0.0477 (8) | 0.0067 (6) | 0.0009 (6) | −0.0092 (6) |
O5 | 0.1314 (17) | 0.0680 (11) | 0.0454 (9) | 0.0625 (12) | −0.0268 (10) | −0.0174 (8) |
O6 | 0.0531 (8) | 0.0400 (8) | 0.0595 (9) | −0.0146 (7) | −0.0111 (7) | 0.0168 (6) |
O7 | 0.0394 (7) | 0.0431 (7) | 0.0461 (7) | 0.0006 (6) | 0.0008 (6) | 0.0109 (6) |
C1 | 0.0691 (15) | 0.0468 (12) | 0.0583 (13) | −0.0196 (11) | 0.0183 (11) | −0.0138 (10) |
C2 | 0.097 (2) | 0.0503 (14) | 0.0836 (18) | −0.0367 (14) | 0.0304 (16) | −0.0141 (13) |
C3 | 0.0840 (18) | 0.0588 (15) | 0.0724 (16) | −0.0314 (14) | 0.0309 (14) | −0.0004 (12) |
C4 | 0.0608 (14) | 0.0522 (12) | 0.0550 (13) | −0.0138 (11) | 0.0225 (11) | −0.0006 (10) |
C5 | 0.0384 (10) | 0.0400 (10) | 0.0384 (10) | −0.0056 (8) | 0.0051 (8) | 0.0000 (8) |
C6 | 0.0361 (9) | 0.0350 (9) | 0.0362 (9) | −0.0015 (7) | 0.0062 (7) | −0.0028 (7) |
C7 | 0.0587 (13) | 0.0326 (10) | 0.0659 (14) | 0.0109 (9) | 0.0079 (11) | 0.0020 (9) |
C8 | 0.0549 (12) | 0.0283 (9) | 0.0450 (10) | 0.0014 (8) | 0.0083 (9) | 0.0069 (8) |
C9 | 0.0400 (9) | 0.0329 (9) | 0.0313 (8) | −0.0043 (7) | 0.0034 (7) | −0.0007 (7) |
C10 | 0.0396 (10) | 0.0512 (12) | 0.0371 (10) | −0.0055 (9) | 0.0090 (8) | −0.0025 (8) |
C11 | 0.0558 (14) | 0.0774 (17) | 0.0714 (15) | −0.0124 (13) | 0.0249 (12) | 0.0100 (13) |
C12 | 0.0458 (14) | 0.122 (3) | 0.091 (2) | −0.0025 (16) | 0.0318 (14) | 0.0096 (19) |
C13 | 0.0408 (13) | 0.106 (2) | 0.087 (2) | 0.0129 (14) | 0.0168 (13) | 0.0048 (18) |
C14 | 0.0410 (12) | 0.0697 (16) | 0.0651 (15) | 0.0102 (10) | 0.0054 (10) | 0.0038 (11) |
C15 | 0.0460 (10) | 0.0327 (9) | 0.0335 (9) | 0.0025 (8) | 0.0009 (7) | 0.0030 (7) |
C16 | 0.0419 (10) | 0.0295 (9) | 0.0362 (9) | 0.0008 (7) | −0.0006 (8) | −0.0026 (7) |
C17 | 0.0382 (10) | 0.0358 (9) | 0.0364 (9) | −0.0010 (7) | −0.0016 (7) | 0.0053 (7) |
C18 | 0.0420 (10) | 0.0329 (9) | 0.0308 (8) | −0.0017 (8) | 0.0027 (7) | 0.0020 (7) |
Co1—O1 | 2.0989 (13) | O6—C18 | 1.258 (2) |
Co1—O2 | 2.0905 (13) | O7—C18 | 1.254 (2) |
Co1—O3 | 2.0396 (13) | C1—C2 | 1.369 (3) |
Co1—N1 | 2.0790 (15) | C1—H1A | 0.9300 |
Co1—N3 | 2.0624 (14) | C2—C3 | 1.390 (4) |
Co1—N5 | 2.0803 (16) | C2—H2A | 0.9300 |
N1—C5 | 1.335 (2) | C3—C4 | 1.361 (3) |
N1—C1 | 1.351 (3) | C3—H3A | 0.9300 |
N2—C6 | 1.378 (2) | C4—C5 | 1.396 (3) |
N2—C5 | 1.387 (2) | C4—H4 | 0.9300 |
N2—H2 | 0.8600 | C7—C8 | 1.352 (3) |
N3—C6 | 1.352 (2) | C7—H7 | 0.9300 |
N3—C9 | 1.355 (2) | C8—C9 | 1.368 (3) |
N4—C9 | 1.368 (2) | C8—H8 | 0.9300 |
N4—C10 | 1.381 (3) | C10—C11 | 1.405 (3) |
N4—H4A | 0.8600 | C11—C12 | 1.381 (4) |
N5—C10 | 1.327 (3) | C11—H11 | 0.9300 |
N5—C14 | 1.358 (3) | C12—C13 | 1.380 (4) |
N6—C6 | 1.347 (2) | C12—H12 | 0.9300 |
N6—C7 | 1.350 (3) | C13—C14 | 1.358 (4) |
O1—H1C | 0.832 (10) | C13—H13 | 0.9300 |
O1—H1D | 0.829 (10) | C14—H14 | 0.9300 |
O2—H2C | 0.841 (10) | C15—C15i | 1.317 (4) |
O2—H2D | 0.836 (10) | C15—C16 | 1.503 (3) |
O3—H3D | 0.832 (10) | C15—H15 | 0.9300 |
O3—H3C | 0.840 (9) | C17—C17ii | 1.308 (4) |
O4—C16 | 1.235 (2) | C17—C18 | 1.497 (2) |
O5—C16 | 1.237 (2) | C17—H17 | 0.9300 |
O3—Co1—N3 | 174.38 (6) | C4—C3—H3A | 120.2 |
O3—Co1—N1 | 92.41 (7) | C2—C3—H3A | 120.2 |
N3—Co1—N1 | 89.63 (6) | C3—C4—C5 | 118.6 (2) |
O3—Co1—N5 | 89.11 (7) | C3—C4—H4 | 120.7 |
N3—Co1—N5 | 89.35 (6) | C5—C4—H4 | 120.7 |
N1—Co1—N5 | 174.48 (6) | N1—C5—N2 | 120.50 (17) |
O3—Co1—O2 | 83.24 (5) | N1—C5—C4 | 122.78 (19) |
N3—Co1—O2 | 91.44 (5) | N2—C5—C4 | 116.69 (18) |
N1—Co1—O2 | 92.79 (6) | N6—C6—N3 | 125.42 (17) |
N5—Co1—O2 | 92.66 (6) | N6—C6—N2 | 114.11 (16) |
O3—Co1—O1 | 91.31 (6) | N3—C6—N2 | 120.46 (16) |
N3—Co1—O1 | 94.07 (6) | N6—C7—C8 | 122.84 (19) |
N1—Co1—O1 | 85.23 (6) | N6—C7—H7 | 118.6 |
N5—Co1—O1 | 89.44 (6) | C8—C7—H7 | 118.6 |
O2—Co1—O1 | 174.13 (5) | C7—C8—C9 | 117.28 (18) |
C5—N1—C1 | 117.16 (17) | C7—C8—H8 | 121.4 |
C5—N1—Co1 | 121.31 (12) | C9—C8—H8 | 121.4 |
C1—N1—Co1 | 119.33 (14) | N3—C9—N4 | 120.86 (16) |
C6—N2—C5 | 130.39 (16) | N3—C9—C8 | 123.00 (17) |
C6—N2—H2 | 114.8 | N4—C9—C8 | 116.13 (16) |
C5—N2—H2 | 114.8 | N5—C10—N4 | 120.42 (17) |
C6—N3—C9 | 115.20 (15) | N5—C10—C11 | 122.6 (2) |
C6—N3—Co1 | 123.13 (11) | N4—C10—C11 | 117.0 (2) |
C9—N3—Co1 | 120.93 (11) | C12—C11—C10 | 118.2 (3) |
C9—N4—C10 | 131.96 (16) | C12—C11—H11 | 120.9 |
C9—N4—H4A | 114.0 | C10—C11—H11 | 120.9 |
C10—N4—H4A | 114.0 | C13—C12—C11 | 119.5 (2) |
C10—N5—C14 | 117.34 (18) | C13—C12—H12 | 120.3 |
C10—N5—Co1 | 121.56 (13) | C11—C12—H12 | 120.3 |
C14—N5—Co1 | 120.41 (15) | C14—C13—C12 | 118.4 (3) |
C6—N6—C7 | 116.15 (17) | C14—C13—H13 | 120.8 |
Co1—O1—H1C | 117 (2) | C12—C13—H13 | 120.8 |
Co1—O1—H1D | 118 (2) | N5—C14—C13 | 123.9 (2) |
H1C—O1—H1D | 109.1 (16) | N5—C14—H14 | 118.1 |
Co1—O2—H2C | 114.8 (18) | C13—C14—H14 | 118.1 |
Co1—O2—H2D | 124.7 (19) | C15i—C15—C16 | 124.5 (2) |
H2C—O2—H2D | 106.8 (15) | C15i—C15—H15 | 117.8 |
Co1—O3—H3D | 121.7 (17) | C16—C15—H15 | 117.8 |
Co1—O3—H3C | 129.8 (17) | O4—C16—O5 | 125.24 (18) |
H3D—O3—H3C | 108.4 (15) | O4—C16—C15 | 117.70 (16) |
N1—C1—C2 | 123.4 (2) | O5—C16—C15 | 117.05 (16) |
N1—C1—H1A | 118.3 | C17ii—C17—C18 | 124.2 (2) |
C2—C1—H1A | 118.3 | C17ii—C17—H17 | 117.9 |
C1—C2—C3 | 118.3 (2) | C18—C17—H17 | 117.9 |
C1—C2—H2A | 120.8 | O7—C18—O6 | 123.72 (17) |
C3—C2—H2A | 120.8 | O7—C18—C17 | 119.26 (16) |
C4—C3—C2 | 119.5 (2) | O6—C18—C17 | 117.01 (16) |
O3—Co1—N1—C5 | −151.20 (15) | C3—C4—C5—N2 | −174.2 (2) |
N3—Co1—N1—C5 | 34.03 (15) | C7—N6—C6—N3 | −1.9 (3) |
O2—Co1—N1—C5 | 125.45 (15) | C7—N6—C6—N2 | 179.18 (18) |
O1—Co1—N1—C5 | −60.08 (15) | C9—N3—C6—N6 | −0.5 (3) |
O3—Co1—N1—C1 | 11.43 (17) | Co1—N3—C6—N6 | 169.80 (15) |
N3—Co1—N1—C1 | −163.33 (17) | C9—N3—C6—N2 | 178.32 (16) |
O2—Co1—N1—C1 | −71.91 (17) | Co1—N3—C6—N2 | −11.4 (2) |
O1—Co1—N1—C1 | 102.55 (17) | C5—N2—C6—N6 | −144.6 (2) |
N1—Co1—N3—C6 | −15.88 (14) | C5—N2—C6—N3 | 36.5 (3) |
N5—Co1—N3—C6 | 158.70 (14) | C6—N6—C7—C8 | 1.9 (3) |
O2—Co1—N3—C6 | −108.66 (14) | N6—C7—C8—C9 | 0.5 (3) |
O1—Co1—N3—C6 | 69.31 (14) | C6—N3—C9—N4 | −178.14 (16) |
N1—Co1—N3—C9 | 153.86 (14) | Co1—N3—C9—N4 | 11.3 (2) |
N5—Co1—N3—C9 | −31.56 (14) | C6—N3—C9—C8 | 3.1 (3) |
O2—Co1—N3—C9 | 61.08 (14) | Co1—N3—C9—C8 | −167.37 (15) |
O1—Co1—N3—C9 | −120.95 (13) | C10—N4—C9—N3 | 26.2 (3) |
O3—Co1—N5—C10 | −141.78 (15) | C10—N4—C9—C8 | −155.0 (2) |
N3—Co1—N5—C10 | 32.82 (15) | C7—C8—C9—N3 | −3.2 (3) |
O2—Co1—N5—C10 | −58.59 (15) | C7—C8—C9—N4 | 178.03 (18) |
O1—Co1—N5—C10 | 126.90 (15) | C14—N5—C10—N4 | 176.3 (2) |
O3—Co1—N5—C14 | 28.44 (17) | Co1—N5—C10—N4 | −13.2 (2) |
N3—Co1—N5—C14 | −156.96 (17) | C14—N5—C10—C11 | −4.0 (3) |
O2—Co1—N5—C14 | 111.63 (17) | Co1—N5—C10—C11 | 166.54 (18) |
O1—Co1—N5—C14 | −62.88 (17) | C9—N4—C10—N5 | −25.1 (3) |
C5—N1—C1—C2 | 3.8 (4) | C9—N4—C10—C11 | 155.2 (2) |
Co1—N1—C1—C2 | −159.5 (2) | N5—C10—C11—C12 | 1.5 (4) |
N1—C1—C2—C3 | 0.4 (5) | N4—C10—C11—C12 | −178.8 (2) |
C1—C2—C3—C4 | −2.7 (5) | C10—C11—C12—C13 | 1.8 (5) |
C2—C3—C4—C5 | 0.7 (4) | C11—C12—C13—C14 | −2.5 (5) |
C1—N1—C5—N2 | 171.9 (2) | C10—N5—C14—C13 | 3.3 (4) |
Co1—N1—C5—N2 | −25.1 (2) | Co1—N5—C14—C13 | −167.3 (2) |
C1—N1—C5—C4 | −6.0 (3) | C12—C13—C14—N5 | −0.1 (5) |
Co1—N1—C5—C4 | 157.03 (17) | C15i—C15—C16—O4 | −155.6 (2) |
C6—N2—C5—N1 | −15.7 (3) | C15i—C15—C16—O5 | 25.1 (4) |
C6—N2—C5—C4 | 162.4 (2) | C17ii—C17—C18—O7 | 11.0 (3) |
C3—C4—C5—N1 | 3.8 (4) | C17ii—C17—C18—O6 | −167.7 (2) |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1, −y, −z+2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2D···O4iii | 0.84 (1) | 1.94 (1) | 2.7396 (19) | 159 (2) |
O2—H2C···O6iv | 0.84 (1) | 1.90 (1) | 2.7374 (18) | 176 (3) |
O3—H3C···O7iv | 0.84 (1) | 1.86 (1) | 2.6929 (18) | 172 (3) |
O3—H3D···O5i | 0.83 (1) | 1.73 (1) | 2.559 (2) | 171 (2) |
O1—H1D···O6v | 0.83 (1) | 1.93 (1) | 2.7374 (19) | 165 (3) |
O1—H1C···O4i | 0.83 (1) | 2.00 (1) | 2.8143 (19) | 166 (2) |
N4—H4A···O5vi | 0.86 | 1.93 | 2.782 (2) | 169 |
N2—H2···O7vii | 0.86 | 2.28 | 3.002 (2) | 141 |
Symmetry codes: (i) −x+1, −y+1, −z; (iii) −x+3/2, y−1/2, −z+1/2; (iv) x+1/2, −y+1/2, z−1/2; (v) x, y, z−1; (vi) x+1/2, −y+1/2, z+1/2; (vii) x+1, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Co(C14H12N6)(H2O)3]C4H2O4 |
Mr | 491.33 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 9.3239 (3), 17.1115 (6), 13.1395 (5) |
β (°) | 96.224 (1) |
V (Å3) | 2084.00 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.88 |
Crystal size (mm) | 0.29 × 0.25 × 0.18 |
Data collection | |
Diffractometer | Bruker APEX CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.785, 0.858 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10365, 3746, 3363 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.026, 0.078, 0.86 |
No. of reflections | 3746 |
No. of parameters | 307 |
No. of restraints | 9 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.28, −0.33 |
Computer programs: SMART (Bruker, 1999), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Co1—O1 | 2.0989 (13) | Co1—N1 | 2.0790 (15) |
Co1—O2 | 2.0905 (13) | Co1—N3 | 2.0624 (14) |
Co1—O3 | 2.0396 (13) | Co1—N5 | 2.0803 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2D···O4i | 0.836 (10) | 1.943 (14) | 2.7396 (19) | 159 (2) |
O2—H2C···O6ii | 0.841 (10) | 1.898 (10) | 2.7374 (18) | 176 (3) |
O3—H3C···O7ii | 0.840 (9) | 1.858 (11) | 2.6929 (18) | 172 (3) |
O3—H3D···O5iii | 0.832 (10) | 1.734 (11) | 2.559 (2) | 171 (2) |
O1—H1D···O6iv | 0.829 (10) | 1.930 (13) | 2.7374 (19) | 165 (3) |
O1—H1C···O4iii | 0.832 (10) | 2.001 (13) | 2.8143 (19) | 166 (2) |
N4—H4A···O5v | 0.86 | 1.93 | 2.782 (2) | 169 |
N2—H2···O7vi | 0.86 | 2.28 | 3.002 (2) | 141 |
Symmetry codes: (i) −x+3/2, y−1/2, −z+1/2; (ii) x+1/2, −y+1/2, z−1/2; (iii) −x+1, −y+1, −z; (iv) x, y, z−1; (v) x+1/2, −y+1/2, z+1/2; (vi) x+1, y, z−1. |
Acknowledgements
The authors are grateful to the Natural Science Foundation of Zhejiang Province (grant No. Y407081) for financial support.
References
Bruker (1999). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Fang, X.-N., Li, X.-F. & Zeng, X.-R. (2005). Acta Cryst. E61, m1123–m1125. Web of Science CSD CrossRef IUCr Journals Google Scholar
Peng, S.-M., Wang, C.-C., Jang, Y.-L., Chen, Y.-H., Li, F.-Y., Mou, C.-Y. & Leung, M.-K. (2000). J. Magn. Mater. 209, 80–83. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sheu, J. T., Liu, T. W. & Peng, S. M. (1996). Chem. Commun. pp. 315–316. CSD CrossRef Web of Science Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Transition metal complexes with polypyridylamine ligands, possessing diverse structures and unusual optical and electromagnetic properties (Sheu et al.,1996), have aroused great interest among researchers. The tri-pyridyldiamine ligand can exhibit donor as well as acceptor properties and can act as a chelating ligand (Peng et al., 2000). In this paper, we report the synthesis and crystal structure of the title compound, (I), (Fig. 1).
The Co atom in (I) has an octahedral coordination formed by the N,N,N-tridentate tpda ligand and three coordinated water molecules. The tpda ligand is tri-coordinated, with the peripheral N1 and N5 atoms in the axial positions [N1—Co1—N5 = 174.48 (6)°] and the central N3 atom in the equatorial plane of the bipyramid. The remaining two equatorial positions are occupied by water molecules (Table 1). The three pyridine rings of the tpda ligand are not coplanar: the dihedral angles between the planes of the central pyridine ring and two peripheral rings are 18.5 (4) and 26.4 (2)° respectively.
The H atoms of both NH groups of the tpda ligand and coordinated water molecules are involved in hydrogen bonds with O atoms of carboxylate groups of fumarate which link the complex molecules to form an infinite three-dimensional network (Table 2, Fig. 2).
The molcular configuration of (I) is similar to that of [2,6-bis(2-pyridylamino)pyridine]dinitrato cadmium monohydrate (Fang et al., 2005).