metal-organic compounds
Dichlorido(6-methyl-2,2′-bipyridine-κ2N,N′)mercury(II)
aIslamic Azad University, Shahr-e-Rey Branch, Tehran, Iran, bDepartment of Chemistry, Islamic Azad University, Kazeroon Branch, Kazeroon, Fars, Iran, and cIslamic Azad University, Izeh Branch, Izeh, Khozestan, Iran
*Correspondence e-mail: v_amani2002@yahoo.com
In the molecule of the title compound, [HgCl2(C11H10N2)], the HgII atom is four-coordinated in a distorted tetrahedral configuration by two N atoms from a 6-methyl-2,2′-bipyridine ligand and two Cl atoms. There is a π–π contact between the pyridine rings [centroid–centroid distance = 3.9758 (5) Å].
Related literature
For related literature, see: Ahmadi, Kalateh, Ebadi et al. (2008); Ahmadi, Khalighi et al. (2008); Ahmadi, Kalateh, Abedi et al. (2008); Kalateh, Ahmadi et al. (2008); Kalateh, Ebadi et al. (2008); Khalighi et al. (2008); Khavasi et al. (2008); Tadayon Pour et al. (2008); Yousefi, Rashidi Vahid et al. (2008); Yousefi, Tadayon Pour et al. (2008); Yousefi, Khalighi et al. (2008). For related structures, see: Chen et al. (2006); Liu et al. (2004).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536808032777/hk2551sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808032777/hk2551Isup2.hkl
For the preparation of the title compound, (I), a solution of 6-methyl-2,2'-bipyridine (0.15 g, 0.88 mmol) in methanol (10 ml) was added to a solution of HgCl2 (0.24 g, 0.88 mmol) in acetonitrile (30 ml) and the resulting colorless solution was stirred for 20 min at 313 K. Then, it was left to evaporate slowly at room temperature. After one week, colorless needle crystals of the title compound were isolated (yield; 0.28 g, 72.03%).
H atoms were positioned geometrically, with C-H = 0.93 and 0.96 Å for aromatic and methyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).[HgCl2(C11H10N2)] | F(000) = 816 |
Mr = 441.70 | Dx = 2.424 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1234 reflections |
a = 9.4742 (19) Å | θ = 2.2–29.2° |
b = 16.164 (3) Å | µ = 13.13 mm−1 |
c = 8.2107 (16) Å | T = 120 K |
β = 105.70 (3)° | Needle, colorless |
V = 1210.4 (4) Å3 | 0.50 × 0.15 × 0.09 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 3263 independent reflections |
Radiation source: fine-focus sealed tube | 2925 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.100 |
ϕ and ω scans | θmax = 29.2°, θmin = 2.2° |
Absorption correction: numerical via shape of crystal determined optically (X-SHAPE and X-RED; Stoe & Cie, 2005) | h = −12→11 |
Tmin = 0.108, Tmax = 0.307 | k = −22→22 |
14334 measured reflections | l = −9→11 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.092 | H-atom parameters constrained |
wR(F2) = 0.197 | w = 1/[σ2(Fo2) + (0.1638P)2 + 3.9978P] where P = (Fo2 + 2Fc2)/3 |
S = 1.14 | (Δ/σ)max = 0.005 |
3263 reflections | Δρmax = 1.39 e Å−3 |
147 parameters | Δρmin = −1.12 e Å−3 |
0 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.020 (2) |
[HgCl2(C11H10N2)] | V = 1210.4 (4) Å3 |
Mr = 441.70 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.4742 (19) Å | µ = 13.13 mm−1 |
b = 16.164 (3) Å | T = 120 K |
c = 8.2107 (16) Å | 0.50 × 0.15 × 0.09 mm |
β = 105.70 (3)° |
Bruker SMART CCD area-detector diffractometer | 3263 independent reflections |
Absorption correction: numerical via shape of crystal determined optically (X-SHAPE and X-RED; Stoe & Cie, 2005) | 2925 reflections with I > 2σ(I) |
Tmin = 0.108, Tmax = 0.307 | Rint = 0.100 |
14334 measured reflections |
R[F2 > 2σ(F2)] = 0.092 | 0 restraints |
wR(F2) = 0.197 | H-atom parameters constrained |
S = 1.14 | Δρmax = 1.39 e Å−3 |
3263 reflections | Δρmin = −1.12 e Å−3 |
147 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Hg1 | 0.81647 (4) | 0.05913 (2) | 0.29276 (5) | 0.0248 (3) | |
Cl1 | 0.8330 (3) | −0.00698 (17) | 0.5642 (3) | 0.0244 (5) | |
Cl2 | 0.7288 (3) | −0.03469 (19) | 0.0569 (4) | 0.0299 (6) | |
N1 | 0.6912 (9) | 0.1861 (5) | 0.3103 (11) | 0.0187 (16) | |
N2 | 0.9427 (10) | 0.1664 (6) | 0.2138 (11) | 0.0227 (18) | |
C1 | 0.4897 (12) | 0.1134 (9) | 0.3776 (14) | 0.032 (2) | |
H1A | 0.4493 | 0.0873 | 0.2700 | 0.048* | |
H1B | 0.4123 | 0.1261 | 0.4285 | 0.048* | |
H1C | 0.5585 | 0.0767 | 0.4500 | 0.048* | |
C2 | 0.5650 (11) | 0.1903 (7) | 0.3534 (13) | 0.024 (2) | |
C3 | 0.5077 (11) | 0.2686 (8) | 0.3770 (14) | 0.030 (2) | |
H3 | 0.4196 | 0.2725 | 0.4058 | 0.036* | |
C4 | 0.5820 (12) | 0.3385 (8) | 0.3573 (14) | 0.029 (2) | |
H4 | 0.5457 | 0.3900 | 0.3764 | 0.034* | |
C5 | 0.7106 (11) | 0.3335 (6) | 0.3093 (15) | 0.024 (2) | |
H5 | 0.7601 | 0.3811 | 0.2924 | 0.028* | |
C6 | 0.7649 (11) | 0.2543 (6) | 0.2868 (11) | 0.0175 (17) | |
C7 | 0.9018 (10) | 0.2430 (6) | 0.2327 (11) | 0.0175 (17) | |
C8 | 0.9819 (11) | 0.3114 (7) | 0.2004 (15) | 0.025 (2) | |
H8 | 0.9522 | 0.3648 | 0.2181 | 0.030* | |
C9 | 1.1063 (13) | 0.2995 (8) | 0.1417 (14) | 0.031 (2) | |
H9 | 1.1609 | 0.3437 | 0.1191 | 0.037* | |
C10 | 1.1450 (11) | 0.2146 (8) | 0.1183 (13) | 0.028 (2) | |
H10 | 1.2258 | 0.2029 | 0.0784 | 0.033* | |
C11 | 1.0615 (10) | 0.1513 (7) | 0.1553 (12) | 0.0211 (19) | |
H11 | 1.0870 | 0.0969 | 0.1399 | 0.025* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Hg1 | 0.0291 (4) | 0.0223 (4) | 0.0234 (4) | −0.00241 (12) | 0.0075 (2) | −0.00050 (12) |
Cl1 | 0.0251 (11) | 0.0254 (12) | 0.0226 (10) | 0.0004 (9) | 0.0061 (8) | 0.0033 (9) |
Cl2 | 0.0307 (13) | 0.0297 (13) | 0.0264 (12) | −0.0031 (11) | 0.0032 (10) | −0.0077 (11) |
N1 | 0.012 (3) | 0.021 (4) | 0.020 (4) | −0.001 (3) | 0.000 (3) | −0.003 (3) |
N2 | 0.022 (4) | 0.032 (5) | 0.014 (3) | 0.001 (3) | 0.004 (3) | −0.007 (3) |
C1 | 0.019 (4) | 0.050 (7) | 0.023 (5) | −0.005 (5) | 0.002 (4) | 0.002 (5) |
C2 | 0.014 (4) | 0.034 (5) | 0.023 (5) | 0.002 (4) | 0.001 (3) | 0.002 (4) |
C3 | 0.015 (4) | 0.044 (7) | 0.026 (5) | 0.001 (4) | −0.003 (4) | −0.012 (5) |
C4 | 0.025 (5) | 0.039 (6) | 0.020 (4) | 0.005 (4) | 0.003 (4) | −0.004 (4) |
C5 | 0.018 (4) | 0.018 (4) | 0.031 (5) | 0.003 (3) | 0.000 (4) | −0.005 (4) |
C6 | 0.025 (4) | 0.014 (4) | 0.008 (3) | 0.000 (3) | −0.005 (3) | 0.001 (3) |
C7 | 0.018 (4) | 0.023 (4) | 0.009 (3) | −0.002 (3) | 0.000 (3) | 0.004 (3) |
C8 | 0.018 (4) | 0.030 (5) | 0.025 (5) | −0.006 (4) | 0.003 (3) | 0.000 (4) |
C9 | 0.025 (5) | 0.042 (7) | 0.018 (4) | 0.004 (4) | −0.008 (4) | 0.017 (5) |
C10 | 0.017 (4) | 0.045 (7) | 0.019 (4) | 0.004 (4) | 0.001 (3) | 0.004 (5) |
C11 | 0.019 (4) | 0.027 (5) | 0.017 (4) | 0.008 (4) | 0.003 (3) | 0.009 (4) |
Cl1—Hg1 | 2.438 (2) | C5—C6 | 1.410 (13) |
Cl2—Hg1 | 2.423 (3) | C5—H5 | 0.9300 |
N1—Hg1 | 2.394 (9) | C6—N1 | 1.347 (13) |
N2—Hg1 | 2.297 (10) | C6—C7 | 1.492 (14) |
C1—C2 | 1.473 (17) | C7—N2 | 1.319 (14) |
C1—H1A | 0.9600 | C7—C8 | 1.406 (14) |
C1—H1B | 0.9600 | C8—C9 | 1.402 (17) |
C1—H1C | 0.9600 | C8—H8 | 0.9300 |
C2—N1 | 1.338 (13) | C9—C10 | 1.446 (18) |
C2—C3 | 1.411 (17) | C9—H9 | 0.9300 |
C3—C4 | 1.363 (18) | C10—C11 | 1.377 (16) |
C3—H3 | 0.9300 | C10—H10 | 0.9300 |
C4—C5 | 1.381 (16) | C11—N2 | 1.360 (13) |
C4—H4 | 0.9300 | C11—H11 | 0.9300 |
Cl2—Hg1—Cl1 | 112.32 (10) | C3—C4—C5 | 120.6 (11) |
N1—Hg1—Cl1 | 103.4 (2) | C3—C4—H4 | 119.7 |
N1—Hg1—Cl2 | 121.1 (2) | C5—C4—H4 | 119.7 |
N2—Hg1—Cl1 | 132.8 (2) | C4—C5—C6 | 118.1 (10) |
N2—Hg1—Cl2 | 109.8 (2) | C4—C5—H5 | 121.0 |
N2—Hg1—N1 | 71.0 (3) | C6—C5—H5 | 121.0 |
C2—N1—Hg1 | 123.6 (7) | N1—C6—C5 | 120.3 (10) |
C2—N1—C6 | 122.1 (9) | N1—C6—C7 | 117.9 (9) |
C6—N1—Hg1 | 114.1 (6) | C5—C6—C7 | 121.8 (9) |
C7—N2—Hg1 | 118.9 (7) | N2—C7—C8 | 121.7 (9) |
C7—N2—C11 | 120.4 (10) | N2—C7—C6 | 117.2 (9) |
C11—N2—Hg1 | 120.6 (8) | C8—C7—C6 | 121.1 (9) |
C2—C1—H1A | 109.5 | C9—C8—C7 | 120.2 (11) |
C2—C1—H1B | 109.5 | C9—C8—H8 | 119.9 |
H1A—C1—H1B | 109.5 | C7—C8—H8 | 119.9 |
C2—C1—H1C | 109.5 | C8—C9—C10 | 116.3 (11) |
H1A—C1—H1C | 109.5 | C8—C9—H9 | 121.8 |
H1B—C1—H1C | 109.5 | C10—C9—H9 | 121.8 |
N1—C2—C3 | 119.1 (10) | C11—C10—C9 | 119.6 (10) |
N1—C2—C1 | 119.5 (10) | C11—C10—H10 | 120.2 |
C3—C2—C1 | 121.3 (10) | C9—C10—H10 | 120.2 |
C4—C3—C2 | 119.8 (11) | N2—C11—C10 | 121.7 (10) |
C4—C3—H3 | 120.1 | N2—C11—H11 | 119.2 |
C2—C3—H3 | 120.1 | C10—C11—H11 | 119.2 |
C2—N1—Hg1—Cl1 | −51.3 (8) | C5—C6—C7—C8 | −0.5 (13) |
C2—N1—Hg1—Cl2 | 75.5 (8) | N2—C7—C8—C9 | 2.0 (15) |
C2—N1—Hg1—N2 | 177.6 (8) | C6—C7—C8—C9 | −176.9 (9) |
C6—N1—Hg1—Cl1 | 123.3 (6) | C7—C8—C9—C10 | −0.2 (14) |
C6—N1—Hg1—Cl2 | −109.9 (6) | C8—C9—C10—C11 | −0.7 (14) |
C6—N1—Hg1—N2 | −7.7 (6) | C9—C10—C11—N2 | 0.0 (15) |
C7—N2—Hg1—Cl1 | −83.2 (8) | C3—C2—N1—C6 | −0.7 (14) |
C7—N2—Hg1—Cl2 | 124.8 (7) | C1—C2—N1—C6 | −179.9 (9) |
C7—N2—Hg1—N1 | 7.6 (7) | C3—C2—N1—Hg1 | 173.6 (7) |
C11—N2—Hg1—Cl1 | 94.0 (7) | C1—C2—N1—Hg1 | −5.7 (13) |
C11—N2—Hg1—Cl2 | −58.0 (7) | C5—C6—N1—C2 | 0.7 (14) |
C11—N2—Hg1—N1 | −175.2 (8) | C7—C6—N1—C2 | −177.8 (8) |
N1—C2—C3—C4 | −0.7 (16) | C5—C6—N1—Hg1 | −174.0 (7) |
C1—C2—C3—C4 | 178.5 (10) | C7—C6—N1—Hg1 | 7.5 (10) |
C2—C3—C4—C5 | 2.0 (16) | C8—C7—N2—C11 | −2.7 (14) |
C3—C4—C5—C6 | −2.0 (16) | C6—C7—N2—C11 | 176.2 (8) |
C4—C5—C6—N1 | 0.6 (14) | C8—C7—N2—Hg1 | 174.5 (7) |
C4—C5—C6—C7 | 179.1 (9) | C6—C7—N2—Hg1 | −6.6 (11) |
N1—C6—C7—N2 | −1.0 (12) | C10—C11—N2—C7 | 1.7 (14) |
C5—C6—C7—N2 | −179.4 (9) | C10—C11—N2—Hg1 | −175.4 (7) |
N1—C6—C7—C8 | 177.9 (9) |
Experimental details
Crystal data | |
Chemical formula | [HgCl2(C11H10N2)] |
Mr | 441.70 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 120 |
a, b, c (Å) | 9.4742 (19), 16.164 (3), 8.2107 (16) |
β (°) | 105.70 (3) |
V (Å3) | 1210.4 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 13.13 |
Crystal size (mm) | 0.50 × 0.15 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Numerical via shape of crystal determined optically (X-SHAPE and X-RED; Stoe & Cie, 2005) |
Tmin, Tmax | 0.108, 0.307 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14334, 3263, 2925 |
Rint | 0.100 |
(sin θ/λ)max (Å−1) | 0.686 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.092, 0.197, 1.14 |
No. of reflections | 3263 |
No. of parameters | 147 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.39, −1.12 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXTL (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Cl1—Hg1 | 2.438 (2) | N1—Hg1 | 2.394 (9) |
Cl2—Hg1 | 2.423 (3) | N2—Hg1 | 2.297 (10) |
Cl2—Hg1—Cl1 | 112.32 (10) | N2—Hg1—Cl1 | 132.8 (2) |
N1—Hg1—Cl1 | 103.4 (2) | N2—Hg1—Cl2 | 109.8 (2) |
N1—Hg1—Cl2 | 121.1 (2) | N2—Hg1—N1 | 71.0 (3) |
Acknowledgements
The authors are grateful to the Islamic Azad University, Shahr-e-Rey Branch, for financial support.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Recently, we reported the syntheses and crystal structures of [Zn(5,5'-dmbpy)Cl2], (II), (Khalighi et al., 2008), [Zn(6-mbpy)Cl2], (III), (Ahmadi, Kalateh, Ebadi et al., 2008), [HgI2(4,4'-dmbpy)], (IV), (Yousefi, Tadayon Pour et al., 2008), [Cd(5,5'-dmbpy)(µ-Cl)2]n, (V), (Ahmadi, Khalighi et al., 2008), [Hg(5,5'-dmbpy)I2], (VI), (Tadayon Pour et al., 2008), [Cu(5,5'-dcbpy)(en)(H2O)2].2.5H2O, (VII), (Yousefi, Khalighi et al., 2008), [Hg(dmphen)I2], (VIII), (Yousefi, Rashidi Vahid et al., 2008), [In(4,4'-dmbpy)Cl3(DMSO)], (IX), (Ahmadi, Kalateh, Abedi et al., 2008), [In(5,5'-dmbpy)Cl3(MeOH)], (X), (Kalateh, Ahmadi et al., 2008), {[HgCl(dm4bt)]2(µ-Cl)2}, (XI), (Khavasi et al., 2008) and {[HgBr(4,4'-dmbpy)]2(µ-Br)2}, (XII), (Kalateh, Ebadi et al., 2008) [where 5,5'-dmbpy is 5,5'-dimethyl-2,2'-bipyridine, 6-mbpy is 6-methyl-2,2'-bipyridine, 4,4'-dmbpy is 4,4'-dimethyl-2,2' -bipyridine, 5,5'-dcbpy is 2,2'-bipyridine-5,5'-dicarboxylate, en is ethylene- diamine, dmphen is 4,7-diphenyl-1,10-phenanthroline, DMSO is dimethyl sulfoxide and dm4bt is 2,2'-dimethyl-4,4'-bithiazole]. There are several HgII complexes, with formula, [HgCl2(N—N)], such as [HgCl2(bipy)], (XIII) and [HgCl2(bipy)][HgCl2], (XIV), (Chen et al., 2006) and [HgCl2(dpdmbip)].CH2Cl2, (XV), (Liu et al., 2004) [where bipy is 2,2'-bipyridine and dpdmbip is 4,4'-diphenyl-6,6'-dimethyl-2,2'-bipyrimidine] have been synthesized and characterized by single-crystal X-ray diffraction methods. We report herein the synthesis and crystal structure of the title compound, (I).
In the title compound, (I), (Fig. 1), the HgII atom is four-coordinated in a distorted tetrahedral configuration by two N atoms from 6-methyl-2,2'-bipyridine and two Cl atoms. The Hg—Cl and Hg—N bond lengths and angles (Table 1) are within normal ranges, as in (XIV) and (XV).
In the crystal structure, the π-π contact (Fig. 2) between the pyridine rings, Cg2—Cg3i [symmetry code: (i) x, 1/2 - y, -1/2 + z, where Cg2 and Cg3 are centroids of the rings (N1/C2-C6) and (N2/C7-C11), respectively] may stabilize the structure, with centroid-centroid distance of 3.9758 (5) Å.