metal-organic compounds
Bis(1,10-phenanthroline-κ2N,N′)(phenylacetato-κO)copper(II) phenylacetate hexahydrate
aFaculty of Materials Science and Chemical Engineering, China University of Geoscience, Wuhan, Hubei 430074, People's Republic of China, and bState Key Laboratory Base of Novel Functional Materials & Preparation Science, Faculty of Materials Science & Chemical Engineering, Institute of Solid Materials Chemistry, Ningbo University, Ningbo, Zhejiang 315211, People's Republic of China
*Correspondence e-mail: zhengyueqing@nbu.edu.cn
In the title compound, [Cu(C8H7O2)(C12H8N2)2](C8H7O2)·6H2O, the Cu atom is in a distorted square-pyramidal coordination environment. The six crystallographically independent uncoordinated water molecules are interconnected by hydrogen bonds, completing dodecawater (H2O)12 clusters which are hydrogen bonded to the carboxylate groups of phenylacetate anions, building up one-dimensional anionic chains propagating along [100]. Between the cationic and anionic chains are hydrogen bonds from water molecules to the carboxylate O atoms belonging to the phenylacetato ligands.
Related literature
For general background, see: Kuroda-Sowa et al. (1997); Lehn (2007); Li et al. (2008). For related structures, see: Addison & Rao (1984); Baruah et al. (2007); Liu & Xu (2005); Ma et al. (2005); Sugimori et al. (1997); Zheng et al. (2001).
Experimental
Crystal data
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Data collection: RAPID-AUTO (Rigaku, 1998); cell RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536808032480/pk2118sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808032480/pk2118Isup2.hkl
Dropwise addition of 2.0 mL(1.0 M) of NaOH to a aqueous solution of CuCl2.2H2O (0.170 g, 1.00 mmol) in 5.0 mL of H2O gave a blue precipitate, which was separated by centrifugation and washed with water until no Cl anions were detectable in the supernatant. The collected blue precipitate was transferred to a mixture of ethanol and water (1:1 V/V, 10 mL), to which phenanthroline (0.198 g, 1.00 mmol) and phenylacetic acid (0.136 g, 1.00 mmol) were added successively. The resulting blue solution (pH = 7.52) was allowed to stand at room temperature. Blue blocklike crystals were grown by slow evaporation for over 7 days.
All H atoms bound to C were positioned geometrically and refined as riding, with C–H = 0.93 Å and Uiso(H) = 1.2Ueq(C). Hydrogen atoms attached to O were located in a difference Fourier map and refined isotropically, with the O–H distances restrained to 0.85 (1) Å and with Uiso(H) = 1.2Ueq(O).
Data collection: RAPID-AUTO (Rigaku, 1998); cell
RAPID-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: OPTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).[Cu(C8H7O2)(C12H8N2)2](C8H7O2)·6H2O | Z = 2 |
Mr = 802.33 | F(000) = 838 |
Triclinic, P1 | Dx = 1.401 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 11.499 (2) Å | Cell parameters from 14647 reflections |
b = 11.903 (2) Å | θ = 3.0–27.5° |
c = 16.066 (3) Å | µ = 0.64 mm−1 |
α = 71.00 (3)° | T = 293 K |
β = 72.97 (3)° | Prism, blue |
γ = 68.93 (3)° | 0.37 × 0.35 × 0.17 mm |
V = 1901.3 (8) Å3 |
Rigaku R-AXIS RAPID diffractometer | 8680 independent reflections |
Radiation source: fine-focus sealed tube | 7070 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scans | θmax = 27.5°, θmin = 3.0° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −14→14 |
Tmin = 0.793, Tmax = 0.902 | k = −15→15 |
18689 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0351P)2 + 1.3044P] where P = (Fo2 + 2Fc2)/3 |
8680 reflections | (Δ/σ)max = 0.002 |
496 parameters | Δρmax = 0.41 e Å−3 |
0 restraints | Δρmin = −0.39 e Å−3 |
[Cu(C8H7O2)(C12H8N2)2](C8H7O2)·6H2O | γ = 68.93 (3)° |
Mr = 802.33 | V = 1901.3 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 11.499 (2) Å | Mo Kα radiation |
b = 11.903 (2) Å | µ = 0.64 mm−1 |
c = 16.066 (3) Å | T = 293 K |
α = 71.00 (3)° | 0.37 × 0.35 × 0.17 mm |
β = 72.97 (3)° |
Rigaku R-AXIS RAPID diffractometer | 8680 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 7070 reflections with I > 2σ(I) |
Tmin = 0.793, Tmax = 0.902 | Rint = 0.030 |
18689 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.095 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.41 e Å−3 |
8680 reflections | Δρmin = −0.39 e Å−3 |
496 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu | 0.68956 (2) | 0.48613 (2) | 0.746890 (15) | 0.01698 (7) | |
N1 | 0.88512 (16) | 0.37869 (15) | 0.70294 (11) | 0.0202 (3) | |
N2 | 0.75896 (16) | 0.62363 (15) | 0.66308 (10) | 0.0187 (3) | |
C1 | 0.9447 (2) | 0.25741 (19) | 0.72006 (14) | 0.0246 (4) | |
H1A | 0.8995 | 0.2027 | 0.7579 | 0.030* | |
C2 | 1.0735 (2) | 0.2091 (2) | 0.68296 (15) | 0.0299 (5) | |
H2A | 1.1123 | 0.1238 | 0.6966 | 0.036* | |
C3 | 1.1417 (2) | 0.2876 (2) | 0.62679 (14) | 0.0282 (5) | |
H3A | 1.2272 | 0.2565 | 0.6024 | 0.034* | |
C4 | 1.08088 (19) | 0.4164 (2) | 0.60633 (13) | 0.0234 (4) | |
C5 | 1.1439 (2) | 0.5061 (2) | 0.54605 (13) | 0.0263 (5) | |
H5A | 1.2291 | 0.4792 | 0.5192 | 0.032* | |
C6 | 1.0814 (2) | 0.6284 (2) | 0.52797 (13) | 0.0274 (5) | |
H6A | 1.1245 | 0.6846 | 0.4893 | 0.033* | |
C7 | 0.9498 (2) | 0.6735 (2) | 0.56728 (12) | 0.0223 (4) | |
C8 | 0.8792 (2) | 0.7998 (2) | 0.54857 (13) | 0.0265 (5) | |
H8A | 0.9184 | 0.8592 | 0.5104 | 0.032* | |
C9 | 0.7529 (2) | 0.8349 (2) | 0.58661 (14) | 0.0265 (5) | |
H9A | 0.7059 | 0.9183 | 0.5749 | 0.032* | |
C10 | 0.6947 (2) | 0.74424 (19) | 0.64352 (13) | 0.0228 (4) | |
H10A | 0.6084 | 0.7689 | 0.6685 | 0.027* | |
C11 | 0.88530 (19) | 0.58773 (19) | 0.62585 (12) | 0.0190 (4) | |
C12 | 0.95214 (19) | 0.45701 (19) | 0.64659 (12) | 0.0192 (4) | |
N3 | 0.71006 (15) | 0.52113 (15) | 0.85842 (10) | 0.0184 (3) | |
N4 | 0.61981 (15) | 0.35480 (15) | 0.84204 (10) | 0.0179 (3) | |
C13 | 0.75535 (19) | 0.60510 (19) | 0.86524 (14) | 0.0234 (4) | |
H13A | 0.7805 | 0.6612 | 0.8131 | 0.028* | |
C14 | 0.7671 (2) | 0.6132 (2) | 0.94739 (15) | 0.0276 (5) | |
H14A | 0.8004 | 0.6728 | 0.9491 | 0.033* | |
C15 | 0.7289 (2) | 0.5323 (2) | 1.02531 (14) | 0.0267 (5) | |
H15A | 0.7355 | 0.5369 | 1.0804 | 0.032* | |
C16 | 0.67958 (19) | 0.44215 (19) | 1.02106 (13) | 0.0215 (4) | |
C17 | 0.6358 (2) | 0.3548 (2) | 1.09815 (13) | 0.0255 (4) | |
H17A | 0.6405 | 0.3554 | 1.1548 | 0.031* | |
C18 | 0.5875 (2) | 0.2709 (2) | 1.09022 (13) | 0.0253 (4) | |
H18A | 0.5588 | 0.2156 | 1.1415 | 0.030* | |
C19 | 0.57996 (18) | 0.26646 (18) | 1.00364 (13) | 0.0204 (4) | |
C20 | 0.53024 (19) | 0.18274 (18) | 0.99020 (13) | 0.0236 (4) | |
H20A | 0.4996 | 0.1256 | 1.0390 | 0.028* | |
C21 | 0.5275 (2) | 0.18630 (19) | 0.90460 (14) | 0.0241 (4) | |
H21A | 0.4949 | 0.1316 | 0.8949 | 0.029* | |
C22 | 0.57429 (19) | 0.27314 (18) | 0.83178 (13) | 0.0219 (4) | |
H22A | 0.5734 | 0.2736 | 0.7740 | 0.026* | |
C23 | 0.62315 (17) | 0.35128 (17) | 0.92720 (12) | 0.0169 (4) | |
C24 | 0.67262 (18) | 0.44035 (18) | 0.93590 (12) | 0.0180 (4) | |
O1 | 0.60569 (13) | 0.47269 (12) | 0.65901 (9) | 0.0194 (3) | |
O2 | 0.46263 (13) | 0.63541 (13) | 0.70364 (9) | 0.0227 (3) | |
C25 | 0.49547 (18) | 0.55256 (18) | 0.66273 (12) | 0.0178 (4) | |
C26 | 0.40023 (19) | 0.53846 (19) | 0.62087 (12) | 0.0196 (4) | |
H26A | 0.3618 | 0.6176 | 0.5828 | 0.024* | |
H26B | 0.4432 | 0.4792 | 0.5841 | 0.024* | |
C27 | 0.29830 (18) | 0.49355 (18) | 0.69518 (12) | 0.0184 (4) | |
C28 | 0.19012 (19) | 0.57800 (19) | 0.72970 (13) | 0.0223 (4) | |
H28A | 0.1794 | 0.6628 | 0.7065 | 0.027* | |
C29 | 0.0977 (2) | 0.5369 (2) | 0.79870 (14) | 0.0267 (4) | |
H29A | 0.0255 | 0.5944 | 0.8212 | 0.032* | |
C30 | 0.1120 (2) | 0.4103 (2) | 0.83452 (14) | 0.0271 (5) | |
H30A | 0.0501 | 0.3828 | 0.8808 | 0.033* | |
C31 | 0.2201 (2) | 0.3260 (2) | 0.79992 (14) | 0.0269 (5) | |
H31A | 0.2306 | 0.2412 | 0.8232 | 0.032* | |
C32 | 0.3130 (2) | 0.36672 (19) | 0.73082 (13) | 0.0226 (4) | |
H32A | 0.3851 | 0.3092 | 0.7083 | 0.027* | |
O3 | 0.92255 (14) | 0.04315 (14) | 0.61308 (10) | 0.0298 (3) | |
O4 | 0.74454 (15) | 0.07607 (14) | 0.71534 (10) | 0.0311 (4) | |
C33 | 0.8540 (2) | 0.01148 (18) | 0.68752 (14) | 0.0239 (4) | |
C34 | 0.9041 (3) | −0.1168 (2) | 0.74904 (15) | 0.0358 (6) | |
H34A | 0.8474 | −0.1657 | 0.7587 | 0.043* | |
H34B | 0.9869 | −0.1587 | 0.7186 | 0.043* | |
C35 | 0.9159 (2) | −0.11314 (18) | 0.83942 (15) | 0.0283 (5) | |
C36 | 1.0334 (2) | −0.1482 (2) | 0.86166 (17) | 0.0370 (6) | |
H36A | 1.1067 | −0.1717 | 0.8196 | 0.044* | |
C37 | 1.0441 (2) | −0.1489 (2) | 0.94604 (19) | 0.0414 (6) | |
H37A | 1.1241 | −0.1726 | 0.9597 | 0.050* | |
C38 | 0.9367 (2) | −0.1145 (2) | 1.00936 (17) | 0.0343 (5) | |
H38A | 0.9438 | −0.1161 | 1.0660 | 0.041* | |
C39 | 0.8190 (2) | −0.0779 (2) | 0.98804 (15) | 0.0320 (5) | |
H39A | 0.7462 | −0.0532 | 1.0301 | 0.038* | |
C40 | 0.8079 (2) | −0.0776 (2) | 0.90389 (15) | 0.0299 (5) | |
H40A | 0.7277 | −0.0535 | 0.8905 | 0.036* | |
O5 | 0.39349 (18) | 1.03378 (16) | 0.68444 (12) | 0.0399 (4) | |
H5B | 0.3819 | 0.9842 | 0.6619 | 0.048* | |
H5C | 0.4245 | 1.0861 | 0.6352 | 0.048* | |
O6 | 0.35322 (16) | 0.87072 (14) | 0.61361 (12) | 0.0356 (4) | |
H6B | 0.3705 | 0.7956 | 0.6428 | 0.043* | |
H6C | 0.2684 | 0.8806 | 0.6087 | 0.043* | |
O7 | 1.14845 (15) | −0.11805 (14) | 0.55998 (10) | 0.0307 (3) | |
H7B | 1.0657 | −0.0635 | 0.5770 | 0.037* | |
H7C | 1.1480 | −0.1006 | 0.5005 | 0.037* | |
O8 | 0.52945 (16) | 0.78513 (16) | 0.46170 (11) | 0.0351 (4) | |
H8B | 0.4871 | 0.8222 | 0.5025 | 0.042* | |
H8C | 0.4789 | 0.7740 | 0.4378 | 0.042* | |
O9 | 0.54855 (19) | −0.03208 (19) | 0.80451 (11) | 0.0478 (5) | |
H9B | 0.5011 | −0.0164 | 0.7692 | 0.057* | |
H9C | 0.6005 | −0.0017 | 0.7841 | 0.057* | |
O10 | 0.64854 (14) | 0.27146 (13) | 0.58757 (9) | 0.0261 (3) | |
H10B | 0.6377 | 0.3379 | 0.6076 | 0.031* | |
H10C | 0.6953 | 0.2065 | 0.6203 | 0.031* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu | 0.01848 (13) | 0.01903 (12) | 0.01421 (11) | −0.01010 (9) | −0.00353 (9) | 0.00032 (9) |
N1 | 0.0194 (8) | 0.0230 (8) | 0.0198 (8) | −0.0072 (7) | −0.0056 (7) | −0.0048 (7) |
N2 | 0.0204 (8) | 0.0226 (8) | 0.0146 (7) | −0.0111 (7) | −0.0037 (6) | −0.0010 (7) |
C1 | 0.0251 (11) | 0.0232 (10) | 0.0267 (10) | −0.0075 (9) | −0.0077 (9) | −0.0048 (9) |
C2 | 0.0268 (11) | 0.0281 (11) | 0.0364 (12) | −0.0003 (9) | −0.0133 (10) | −0.0123 (10) |
C3 | 0.0190 (10) | 0.0410 (13) | 0.0285 (11) | −0.0049 (9) | −0.0070 (9) | −0.0158 (10) |
C4 | 0.0196 (10) | 0.0378 (12) | 0.0194 (9) | −0.0108 (9) | −0.0043 (8) | −0.0127 (9) |
C5 | 0.0195 (10) | 0.0486 (14) | 0.0180 (9) | −0.0175 (10) | −0.0001 (8) | −0.0123 (10) |
C6 | 0.0274 (11) | 0.0469 (13) | 0.0165 (9) | −0.0255 (10) | −0.0008 (8) | −0.0057 (9) |
C7 | 0.0266 (11) | 0.0336 (11) | 0.0131 (8) | −0.0187 (9) | −0.0036 (8) | −0.0032 (8) |
C8 | 0.0375 (12) | 0.0311 (11) | 0.0178 (9) | −0.0242 (10) | −0.0061 (9) | 0.0015 (9) |
C9 | 0.0346 (12) | 0.0238 (10) | 0.0233 (10) | −0.0147 (9) | −0.0096 (9) | 0.0017 (9) |
C10 | 0.0252 (11) | 0.0233 (10) | 0.0206 (9) | −0.0105 (8) | −0.0060 (8) | −0.0013 (8) |
C11 | 0.0214 (10) | 0.0280 (10) | 0.0126 (8) | −0.0123 (8) | −0.0046 (7) | −0.0048 (8) |
C12 | 0.0202 (10) | 0.0272 (10) | 0.0145 (8) | −0.0106 (8) | −0.0047 (7) | −0.0054 (8) |
N3 | 0.0163 (8) | 0.0219 (8) | 0.0181 (8) | −0.0073 (7) | −0.0038 (6) | −0.0039 (7) |
N4 | 0.0175 (8) | 0.0192 (8) | 0.0169 (7) | −0.0076 (7) | −0.0032 (6) | −0.0018 (7) |
C13 | 0.0219 (10) | 0.0255 (10) | 0.0235 (10) | −0.0113 (8) | −0.0045 (8) | −0.0022 (9) |
C14 | 0.0246 (11) | 0.0327 (11) | 0.0336 (11) | −0.0123 (9) | −0.0065 (9) | −0.0137 (10) |
C15 | 0.0223 (11) | 0.0344 (12) | 0.0261 (10) | −0.0031 (9) | −0.0073 (9) | −0.0145 (10) |
C16 | 0.0161 (9) | 0.0265 (10) | 0.0183 (9) | −0.0016 (8) | −0.0026 (7) | −0.0067 (8) |
C17 | 0.0234 (11) | 0.0313 (11) | 0.0159 (9) | −0.0018 (9) | −0.0042 (8) | −0.0048 (9) |
C18 | 0.0226 (10) | 0.0280 (11) | 0.0161 (9) | −0.0039 (9) | −0.0012 (8) | 0.0001 (8) |
C19 | 0.0161 (9) | 0.0205 (9) | 0.0172 (9) | −0.0027 (8) | −0.0012 (7) | −0.0001 (8) |
C20 | 0.0210 (10) | 0.0187 (9) | 0.0222 (10) | −0.0065 (8) | −0.0009 (8) | 0.0040 (8) |
C21 | 0.0236 (11) | 0.0204 (10) | 0.0282 (10) | −0.0101 (8) | −0.0054 (9) | −0.0017 (9) |
C22 | 0.0227 (10) | 0.0236 (10) | 0.0205 (9) | −0.0090 (8) | −0.0046 (8) | −0.0039 (8) |
C23 | 0.0131 (9) | 0.0184 (9) | 0.0148 (8) | −0.0026 (7) | −0.0025 (7) | −0.0012 (7) |
C24 | 0.0132 (9) | 0.0201 (9) | 0.0174 (9) | −0.0015 (7) | −0.0035 (7) | −0.0038 (8) |
O1 | 0.0204 (7) | 0.0212 (7) | 0.0170 (6) | −0.0089 (6) | −0.0052 (5) | −0.0010 (6) |
O2 | 0.0237 (7) | 0.0284 (7) | 0.0179 (6) | −0.0100 (6) | −0.0019 (6) | −0.0076 (6) |
C25 | 0.0195 (10) | 0.0213 (9) | 0.0107 (8) | −0.0101 (8) | −0.0012 (7) | 0.0016 (7) |
C26 | 0.0199 (10) | 0.0236 (10) | 0.0155 (9) | −0.0066 (8) | −0.0056 (7) | −0.0030 (8) |
C27 | 0.0194 (10) | 0.0228 (9) | 0.0162 (8) | −0.0084 (8) | −0.0084 (7) | −0.0019 (8) |
C28 | 0.0211 (10) | 0.0230 (10) | 0.0231 (10) | −0.0075 (8) | −0.0059 (8) | −0.0034 (8) |
C29 | 0.0183 (10) | 0.0347 (12) | 0.0275 (10) | −0.0077 (9) | −0.0032 (8) | −0.0095 (9) |
C30 | 0.0255 (11) | 0.0383 (12) | 0.0211 (10) | −0.0202 (10) | −0.0038 (8) | −0.0007 (9) |
C31 | 0.0356 (12) | 0.0244 (10) | 0.0251 (10) | −0.0168 (9) | −0.0131 (9) | 0.0034 (9) |
C32 | 0.0239 (10) | 0.0225 (10) | 0.0229 (10) | −0.0058 (8) | −0.0089 (8) | −0.0048 (8) |
O3 | 0.0261 (8) | 0.0244 (8) | 0.0299 (8) | −0.0068 (6) | −0.0034 (6) | 0.0023 (7) |
O4 | 0.0313 (9) | 0.0238 (8) | 0.0272 (8) | −0.0068 (7) | −0.0010 (7) | 0.0023 (6) |
C33 | 0.0302 (11) | 0.0166 (9) | 0.0239 (10) | −0.0085 (9) | −0.0076 (9) | −0.0001 (8) |
C34 | 0.0529 (16) | 0.0179 (10) | 0.0274 (11) | −0.0038 (10) | −0.0079 (11) | −0.0012 (9) |
C35 | 0.0354 (12) | 0.0139 (9) | 0.0286 (11) | −0.0048 (9) | −0.0056 (9) | 0.0006 (9) |
C36 | 0.0304 (13) | 0.0282 (12) | 0.0446 (14) | −0.0035 (10) | −0.0012 (11) | −0.0101 (11) |
C37 | 0.0309 (13) | 0.0395 (14) | 0.0561 (16) | −0.0032 (11) | −0.0164 (12) | −0.0156 (13) |
C38 | 0.0400 (14) | 0.0268 (11) | 0.0363 (12) | −0.0072 (10) | −0.0150 (11) | −0.0041 (10) |
C39 | 0.0330 (12) | 0.0288 (11) | 0.0256 (11) | −0.0069 (10) | −0.0035 (9) | −0.0002 (9) |
C40 | 0.0274 (11) | 0.0268 (11) | 0.0275 (11) | −0.0052 (9) | −0.0078 (9) | 0.0026 (9) |
O5 | 0.0506 (11) | 0.0361 (9) | 0.0412 (9) | −0.0205 (8) | −0.0180 (8) | −0.0034 (8) |
O6 | 0.0385 (9) | 0.0259 (8) | 0.0460 (10) | −0.0092 (7) | −0.0167 (8) | −0.0065 (7) |
O7 | 0.0279 (8) | 0.0314 (8) | 0.0277 (8) | −0.0047 (7) | −0.0064 (6) | −0.0044 (7) |
O8 | 0.0335 (9) | 0.0430 (10) | 0.0340 (8) | −0.0173 (8) | −0.0045 (7) | −0.0114 (8) |
O9 | 0.0638 (13) | 0.0678 (13) | 0.0242 (8) | −0.0491 (11) | −0.0145 (8) | 0.0113 (8) |
O10 | 0.0317 (8) | 0.0221 (7) | 0.0245 (7) | −0.0073 (6) | −0.0095 (6) | −0.0031 (6) |
Cu—N2 | 2.0009 (18) | C21—H21A | 0.9300 |
Cu—O1 | 2.0011 (14) | C22—H22A | 0.9300 |
Cu—N4 | 2.0128 (17) | C23—C24 | 1.430 (3) |
Cu—N3 | 2.0600 (16) | O1—C25 | 1.281 (2) |
Cu—N1 | 2.1866 (19) | O2—C25 | 1.247 (2) |
N1—C1 | 1.330 (3) | C25—C26 | 1.522 (3) |
N1—C12 | 1.357 (3) | C26—C27 | 1.517 (3) |
N2—C10 | 1.336 (3) | C26—H26A | 0.9700 |
N2—C11 | 1.365 (3) | C26—H26B | 0.9700 |
C1—C2 | 1.405 (3) | C27—C28 | 1.388 (3) |
C1—H1A | 0.9300 | C27—C32 | 1.395 (3) |
C2—C3 | 1.366 (3) | C28—C29 | 1.389 (3) |
C2—H2A | 0.9300 | C28—H28A | 0.9300 |
C3—C4 | 1.408 (3) | C29—C30 | 1.393 (3) |
C3—H3A | 0.9300 | C29—H29A | 0.9300 |
C4—C12 | 1.404 (3) | C30—C31 | 1.387 (3) |
C4—C5 | 1.441 (3) | C30—H30A | 0.9300 |
C5—C6 | 1.347 (3) | C31—C32 | 1.391 (3) |
C5—H5A | 0.9300 | C31—H31A | 0.9300 |
C6—C7 | 1.434 (3) | C32—H32A | 0.9300 |
C6—H6A | 0.9300 | O3—C33 | 1.250 (3) |
C7—C8 | 1.407 (3) | O4—C33 | 1.254 (3) |
C7—C11 | 1.410 (3) | C33—C34 | 1.536 (3) |
C8—C9 | 1.366 (3) | C34—C35 | 1.513 (3) |
C8—H8A | 0.9300 | C34—H34A | 0.9700 |
C9—C10 | 1.403 (3) | C34—H34B | 0.9700 |
C9—H9A | 0.9300 | C35—C36 | 1.382 (3) |
C10—H10A | 0.9300 | C35—C40 | 1.395 (3) |
C11—C12 | 1.441 (3) | C36—C37 | 1.394 (4) |
N3—C13 | 1.327 (3) | C36—H36A | 0.9300 |
N3—C24 | 1.365 (3) | C37—C38 | 1.378 (4) |
N4—C22 | 1.329 (2) | C37—H37A | 0.9300 |
N4—C23 | 1.367 (2) | C38—C39 | 1.375 (3) |
C13—C14 | 1.402 (3) | C38—H38A | 0.9300 |
C13—H13A | 0.9300 | C39—C40 | 1.393 (3) |
C14—C15 | 1.373 (3) | C39—H39A | 0.9300 |
C14—H14A | 0.9300 | C40—H40A | 0.9300 |
C15—C16 | 1.409 (3) | O5—H5B | 0.8492 |
C15—H15A | 0.9300 | O5—H5C | 0.9025 |
C16—C24 | 1.401 (3) | O6—H6B | 0.8443 |
C16—C17 | 1.429 (3) | O6—H6C | 0.9634 |
C17—C18 | 1.359 (3) | O7—H7B | 0.9596 |
C17—H17A | 0.9300 | O7—H7C | 0.9107 |
C18—C19 | 1.438 (3) | O8—H8B | 0.8418 |
C18—H18A | 0.9300 | O8—H8C | 0.8508 |
C19—C23 | 1.404 (3) | O9—H9B | 0.8328 |
C19—C20 | 1.410 (3) | O9—H9C | 0.7473 |
C20—C21 | 1.371 (3) | O10—H10B | 0.9033 |
C20—H20A | 0.9300 | O10—H10C | 0.8749 |
C21—C22 | 1.404 (3) | ||
N2—Cu—O1 | 95.38 (6) | C20—C19—C18 | 124.14 (18) |
N2—Cu—N4 | 173.84 (6) | C21—C20—C19 | 119.44 (18) |
O1—Cu—N4 | 90.11 (6) | C21—C20—H20A | 120.3 |
N2—Cu—N3 | 92.59 (7) | C19—C20—H20A | 120.3 |
O1—Cu—N3 | 159.85 (6) | C20—C21—C22 | 119.49 (19) |
N4—Cu—N3 | 81.31 (7) | C20—C21—H21A | 120.3 |
N2—Cu—N1 | 80.25 (7) | C22—C21—H21A | 120.3 |
O1—Cu—N1 | 99.99 (6) | N4—C22—C21 | 122.70 (18) |
N4—Cu—N1 | 101.58 (7) | N4—C22—H22A | 118.7 |
N3—Cu—N1 | 99.58 (7) | C21—C22—H22A | 118.7 |
C1—N1—C12 | 118.02 (18) | N4—C23—C19 | 123.02 (18) |
C1—N1—Cu | 132.56 (14) | N4—C23—C24 | 116.59 (16) |
C12—N1—Cu | 109.42 (13) | C19—C23—C24 | 120.39 (17) |
C10—N2—C11 | 118.72 (17) | N3—C24—C16 | 123.45 (18) |
C10—N2—Cu | 126.25 (14) | N3—C24—C23 | 116.65 (17) |
C11—N2—Cu | 114.99 (13) | C16—C24—C23 | 119.90 (18) |
N1—C1—C2 | 122.3 (2) | C25—O1—Cu | 108.11 (12) |
N1—C1—H1A | 118.8 | O2—C25—O1 | 122.11 (18) |
C2—C1—H1A | 118.8 | O2—C25—C26 | 119.94 (18) |
C3—C2—C1 | 119.9 (2) | O1—C25—C26 | 117.82 (17) |
C3—C2—H2A | 120.1 | C27—C26—C25 | 108.99 (15) |
C1—C2—H2A | 120.1 | C27—C26—H26A | 109.9 |
C2—C3—C4 | 119.2 (2) | C25—C26—H26A | 109.9 |
C2—C3—H3A | 120.4 | C27—C26—H26B | 109.9 |
C4—C3—H3A | 120.4 | C25—C26—H26B | 109.9 |
C12—C4—C3 | 117.3 (2) | H26A—C26—H26B | 108.3 |
C12—C4—C5 | 119.5 (2) | C28—C27—C32 | 119.05 (19) |
C3—C4—C5 | 123.19 (19) | C28—C27—C26 | 120.48 (18) |
C6—C5—C4 | 121.05 (19) | C32—C27—C26 | 120.47 (18) |
C6—C5—H5A | 119.5 | C27—C28—C29 | 120.5 (2) |
C4—C5—H5A | 119.5 | C27—C28—H28A | 119.8 |
C5—C6—C7 | 121.2 (2) | C29—C28—H28A | 119.8 |
C5—C6—H6A | 119.4 | C28—C29—C30 | 120.6 (2) |
C7—C6—H6A | 119.4 | C28—C29—H29A | 119.7 |
C8—C7—C11 | 117.52 (19) | C30—C29—H29A | 119.7 |
C8—C7—C6 | 123.42 (19) | C31—C30—C29 | 118.83 (19) |
C11—C7—C6 | 119.0 (2) | C31—C30—H30A | 120.6 |
C9—C8—C7 | 119.88 (19) | C29—C30—H30A | 120.6 |
C9—C8—H8A | 120.1 | C30—C31—C32 | 120.7 (2) |
C7—C8—H8A | 120.1 | C30—C31—H31A | 119.6 |
C8—C9—C10 | 119.5 (2) | C32—C31—H31A | 119.6 |
C8—C9—H9A | 120.3 | C31—C32—C27 | 120.3 (2) |
C10—C9—H9A | 120.3 | C31—C32—H32A | 119.9 |
N2—C10—C9 | 122.2 (2) | C27—C32—H32A | 119.9 |
N2—C10—H10A | 118.9 | O3—C33—O4 | 124.60 (19) |
C9—C10—H10A | 118.9 | O3—C33—C34 | 118.50 (19) |
N2—C11—C7 | 122.18 (19) | O4—C33—C34 | 116.88 (19) |
N2—C11—C12 | 117.75 (17) | C35—C34—C33 | 114.35 (18) |
C7—C11—C12 | 120.06 (18) | C35—C34—H34A | 108.7 |
N1—C12—C4 | 123.28 (19) | C33—C34—H34A | 108.7 |
N1—C12—C11 | 117.49 (17) | C35—C34—H34B | 108.7 |
C4—C12—C11 | 119.20 (18) | C33—C34—H34B | 108.7 |
C13—N3—C24 | 117.51 (17) | H34A—C34—H34B | 107.6 |
C13—N3—Cu | 130.54 (14) | C36—C35—C40 | 118.0 (2) |
C24—N3—Cu | 111.93 (12) | C36—C35—C34 | 121.2 (2) |
C22—N4—C23 | 118.00 (17) | C40—C35—C34 | 120.9 (2) |
C22—N4—Cu | 128.52 (13) | C35—C36—C37 | 121.2 (2) |
C23—N4—Cu | 113.47 (12) | C35—C36—H36A | 119.4 |
N3—C13—C14 | 123.11 (19) | C37—C36—H36A | 119.4 |
N3—C13—H13A | 118.4 | C38—C37—C36 | 120.3 (2) |
C14—C13—H13A | 118.4 | C38—C37—H37A | 119.8 |
C15—C14—C13 | 119.33 (19) | C36—C37—H37A | 119.8 |
C15—C14—H14A | 120.3 | C39—C38—C37 | 119.4 (2) |
C13—C14—H14A | 120.3 | C39—C38—H38A | 120.3 |
C14—C15—C16 | 119.35 (19) | C37—C38—H38A | 120.3 |
C14—C15—H15A | 120.3 | C38—C39—C40 | 120.5 (2) |
C16—C15—H15A | 120.3 | C38—C39—H39A | 119.8 |
C24—C16—C15 | 117.25 (19) | C40—C39—H39A | 119.8 |
C24—C16—C17 | 119.03 (19) | C39—C40—C35 | 120.8 (2) |
C15—C16—C17 | 123.72 (19) | C39—C40—H40A | 119.6 |
C18—C17—C16 | 121.23 (19) | C35—C40—H40A | 119.6 |
C18—C17—H17A | 119.4 | H5B—O5—H5C | 102.2 |
C16—C17—H17A | 119.4 | H6B—O6—H6C | 97.9 |
C17—C18—C19 | 120.92 (19) | H7B—O7—H7C | 97.3 |
C17—C18—H18A | 119.5 | H8B—O8—H8C | 109.3 |
C19—C18—H18A | 119.5 | H9B—O9—H9C | 112.4 |
C23—C19—C20 | 117.33 (18) | H10B—O10—H10C | 107.4 |
C23—C19—C18 | 118.53 (19) |
D—H···A | D—H | H···A | D···A | D—H···A |
O5—H5B···O6 | 0.849 | 1.920 | 2.769 (3) | 178.64 |
O5—H5C···O8i | 0.902 | 1.898 | 2.794 (3) | 171.66 |
O6—H6B···O2 | 0.844 | 1.912 | 2.723 (2) | 160.78 |
O6—H6C···O7ii | 0.963 | 1.767 | 2.682 (3) | 157.25 |
O7—H7B···O3 | 0.960 | 1.754 | 2.710 (2) | 173.79 |
O7—H7C···O3iii | 0.911 | 2.028 | 2.896 (2) | 158.83 |
O8—H8B···O6 | 0.842 | 2.076 | 2.888 (3) | 161.67 |
O8—H8C···O10iv | 0.851 | 1.915 | 2.749 (3) | 166.41 |
O9—H9B···O5v | 0.833 | 1.915 | 2.746 (3) | 175.07 |
O9—H9C···O4 | 0.747 | 2.046 | 2.790 (3) | 173.58 |
O10—H10B···O1 | 0.903 | 1.911 | 2.812 (2) | 175.12 |
O10—H10C···O4 | 0.875 | 1.842 | 2.686 (2) | 161.44 |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) x−1, y+1, z; (iii) −x+2, −y, −z+1; (iv) −x+1, −y+1, −z+1; (v) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C8H7O2)(C12H8N2)2](C8H7O2)·6H2O |
Mr | 802.33 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 11.499 (2), 11.903 (2), 16.066 (3) |
α, β, γ (°) | 71.00 (3), 72.97 (3), 68.93 (3) |
V (Å3) | 1901.3 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.64 |
Crystal size (mm) | 0.37 × 0.35 × 0.17 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.793, 0.902 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18689, 8680, 7070 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.095, 1.08 |
No. of reflections | 8680 |
No. of parameters | 496 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.41, −0.39 |
Computer programs: RAPID-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), OPTEPII (Johnson, 1976).
Acknowledgements
This project was sponsored by the K. C. Wong Magna Fund of Ningbo University and supported by the Expert Project of Key Basic Research of the Ministry of Science and Technology of China (grant No. 2003CCA00800), the Zhejiang Provincial Natural Science Foundation (grant No. Z203067) and the Ningbo Municipal Natural Science Foundation (grant No. 2006 A610061).
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Construction of supramolecular architectures with interesting physical properties has grown rapidly owing to their potential use as new functional materials (Lehn, 2007). The most efficient and widely used approach for designing such materials is the self-assembly of organic ligands and metal ions (Kuroda-Sowa et al., 1997; Li et al., 2008). Here, we report a Cu(II) complex [Cu(C12H8N2)2(C8H7O2)](C8H7O2).6H2O from the self-assembly of Cu(OH)2, phenylacetatic acid and phenanthroline.
The title compound consists of [Cu(C12H8N2)2(C8H7O2)]2+ complex cations, phenylacetate anions, and water molecules of crystallization (Fig.1). The Cu atoms are each coordinated by two phenanthroline ligands and one phenylacetato ligand to complete a square-pyramidal CuN4O chromophore with the phenylacetic oxygen atom at the equatorial site. The equatorial Cu–N bond lengths fall in the range 2.002–2.060 Å and the Cu–O bond distance is equal to 2.001 (1) Å, while the axial Cu–N bond distance is 2.187 (2) Å. According to Addison's definition (Addison & Rao, 1984), the τ index about the central Cu atom is 0.233 Å, suggesting that the square pyramidal coordination geometry is slightly distorted with the Cu atom deviated from the basal plane by 0.1779 (8) Å towards the apical N1 atom. Within each complex cation, both phenanthroline ligands exhibit nearly perfect coplanarity and constitute an orthogonal system with the coordinating carboxylate group of the phenylacetate anion. The complex cation displays a similar configuration to those observed in a succinato complex [Cu(phen)2(C4H4O4)] previously reported by us (Zheng et al., 2001) and all the bonding parameters are normal (Baruah et al., 2007). As far as the phenylacetato ligand is concerned, the phenyl plane is found to be nearly perpendicular to the single bonded carbon backbone (dihedral angle: 89.5 (1)°), which is significantly larger than the corresponding one of 68.6 (2)° in the non-coordinating phenylacetate anion, and the carboxylate group is twisted from the single bonded carbon backbone by 70.4 (2)° in the former coordinating one, and is considerably larger the 60.7 (2)° in the non-coordinating anion. As expected, the C–O bond distance for the coordinating oxygen atom is 1.281 (2) Å, which is longer than those for non-coordinating ones (1.247–1.254 Å). The complex cations are distributed in such a way that the symmetry-related phenanthroline ligands are oriented antiparallel with a mean interplanar distance of 3.39 (2) Å, indicating a significant face-to-face π-π stacking interaction (Sugimori et al., 1997). Owing to such intercationic π-π stacking interactions and weak intercationic C–H···O interactions with the uncoordinating carboxylate oxygen atom, two centrosymmetrically related complex cations form dimers, which are further assembled via interdimeric π-π stacking interactions into 1D chains extending along the [101] direction. Furthermore, the resulting chains are arranged in planes parallel to (010), between which the lattice water molecules and the phenylacetate anions are sandwiched.
Out of the six crystallographically distinct lattice water molecules, three water molecules together with their centrosymmetry-related partners are hydrogen bonded to one another to generate chair-like hexawater clusters (Fig.2), to which the remaining lattice water molecules are associated by hydrogen bonds to complete dodecawater (H2O)12 clusters similar to those reported in the literature (Liu & Xu, 2005; Ma et al., 2005). The resulting dodecawater (H2O)12 clusters are hydrogen bonded to the carboxylate groups of phenylacetate anions to build up 1D anionic chains propagating along [100]. Between the cationic and anionic chains exist hydrogen bonds from water molecules to the carboxylate oxygen atoms belonging to the phenylacetato ligands.