metal-organic compounds
Bis[2-(2-pyridylmethyleneamino)benzenesulfonato-κ3N,N′,O]cadmium(II) dihydrate
aCollege of Chemistry and Chemical Engineering, Guangxi Normal University, Guilin, Guangxi 541004, People's Republic of China, and bSchool of Medicine, Shao Yang Medical College, Shaoyang 422000, People's Republic of China
*Correspondence e-mail: ouyangmiao123456@126.com
The title complex, [Cd(Paba)2]·2H2O or [Cd(C12H9N2O3S)2]·2H2O, was synthesized by the reaction of the potassium salt of 2-(2-pyridylmethyleneamino)benzenesulfonic acid (PabaK) with CdCl2·2.5H2O in methanol. The CdII atom lies on a crystallographic twofold axis and is coordinated by four N atoms and two O atoms from two deprotonated tridentate 2-(2-pyridylmethyleneamino)benzenesulfonate ligands in a slightly distorted octahedral environment. There are extensive hydrogen bonds of the type O—H⋯O between the uncoordinated water molecules and the sulfonate O atoms, through which the complex forms a layered structure parallel to (001).
Related literature
For the isostructural Zn compound, see: Cai et al. (2008). For synthesis of the ligand, see: Casella & Gullotti (1986).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808034387/pk2123sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808034387/pk2123Isup2.hkl
The potassium salt of 2-(2- pyridylmethyleneamino)benzenesulfonic acid(PabaK) was synthesized according to the literature methods (Casella & Gullotti, 1986).
For the preparation of the title complex, the ligand PabaK (1 mmol, 0.30 g) was dissolved in methanol (10 ml) at 333 K and an aqueous solution (10 ml) containing CdCl2.2.5H2O (0.5 mmol, 0.12 g) was added. The resulting mixture was stirred at 333 K for 4 h. Then the mixture was filtrated and the filtrate was left to stand at room temperature. Yellow crystals suitable for X-ray diffraction were obtained after a week in a yield of 35%. Elemental analysis,.found (%): C, 46.91; H, 3.36; N, 8.30; S, 9.45; calc (%): C, 42.96; H, 3.31; N, 8.35; S, 9.56.
H atoms bonded to C were positioned geometrically with C—H distance 0.93 Å, and treated as riding atoms,with Uiso(H)= 1.2Ueq(C). Water hydrogens were placed in fixed positions and assigned Uiso values of 1.5 Ueq of the water oxygen atom.
Data collection: SMART (Bruker, 2004); cell
SMART (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Cd(C12H9N2O3S)2]·2H2O | F(000) = 1352 |
Mr = 670.98 | Dx = 1.692 Mg m−3 |
Orthorhombic, Pbcn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2n 2ab | Cell parameters from 2541 reflections |
a = 20.255 (4) Å | θ = 2.5–23.2° |
b = 7.8924 (17) Å | µ = 1.04 mm−1 |
c = 16.475 (3) Å | T = 291 K |
V = 2633.7 (9) Å3 | Block, colourless |
Z = 4 | 0.23 × 0.08 × 0.05 mm |
Bruker SMART CCD area-detector diffractometer | 2443 independent reflections |
Radiation source: fine-focus sealed tube | 1672 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.075 |
ϕ and ω scans | θmax = 25.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −24→24 |
Tmin = 0.798, Tmax = 0.950 | k = −9→9 |
18106 measured reflections | l = −19→19 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0212P)2 + 3.1957P] where P = (Fo2 + 2Fc2)/3 |
2443 reflections | (Δ/σ)max = 0.001 |
177 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
[Cd(C12H9N2O3S)2]·2H2O | V = 2633.7 (9) Å3 |
Mr = 670.98 | Z = 4 |
Orthorhombic, Pbcn | Mo Kα radiation |
a = 20.255 (4) Å | µ = 1.04 mm−1 |
b = 7.8924 (17) Å | T = 291 K |
c = 16.475 (3) Å | 0.23 × 0.08 × 0.05 mm |
Bruker SMART CCD area-detector diffractometer | 2443 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1672 reflections with I > 2σ(I) |
Tmin = 0.798, Tmax = 0.950 | Rint = 0.075 |
18106 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.075 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.33 e Å−3 |
2443 reflections | Δρmin = −0.33 e Å−3 |
177 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.5000 | 0.68040 (5) | 0.7500 | 0.03074 (13) | |
S2 | 0.62752 (5) | 0.83468 (15) | 0.66388 (6) | 0.0372 (3) | |
N1 | 0.59409 (15) | 0.7358 (4) | 0.83494 (18) | 0.0302 (7) | |
C12 | 0.60345 (19) | 0.6263 (5) | 0.8904 (2) | 0.0382 (10) | |
H12 | 0.6393 | 0.6381 | 0.9253 | 0.046* | |
N3 | 0.50869 (16) | 0.4691 (4) | 0.84673 (18) | 0.0373 (8) | |
O1 | 0.64757 (15) | 0.6598 (4) | 0.67446 (17) | 0.0523 (8) | |
O2 | 0.55529 (12) | 0.8506 (4) | 0.66248 (15) | 0.0413 (7) | |
O3 | 0.65696 (14) | 0.9203 (4) | 0.59556 (16) | 0.0509 (8) | |
O4 | 0.69916 (18) | 0.4179 (6) | 0.5615 (2) | 0.1121 (17) | |
H1W | 0.6840 | 0.4904 | 0.5948 | 0.168* | |
H2W | 0.7324 | 0.3778 | 0.5833 | 0.168* | |
C1 | 0.65210 (16) | 0.9451 (5) | 0.7530 (3) | 0.0342 (9) | |
C2 | 0.63521 (18) | 0.8827 (5) | 0.8292 (2) | 0.0319 (9) | |
C3 | 0.6563 (2) | 0.9697 (6) | 0.8973 (3) | 0.0455 (11) | |
H3 | 0.6462 | 0.9281 | 0.9486 | 0.055* | |
C4 | 0.6920 (2) | 1.1170 (6) | 0.8899 (3) | 0.0552 (13) | |
H4 | 0.7057 | 1.1748 | 0.9361 | 0.066* | |
C5 | 0.7074 (2) | 1.1785 (6) | 0.8147 (3) | 0.0561 (13) | |
H5 | 0.7310 | 1.2790 | 0.8099 | 0.067* | |
C6 | 0.6880 (2) | 1.0922 (5) | 0.7457 (3) | 0.0481 (11) | |
H6 | 0.6992 | 1.1333 | 0.6947 | 0.058* | |
C7 | 0.55885 (19) | 0.4823 (5) | 0.9002 (2) | 0.0334 (9) | |
C8 | 0.5667 (2) | 0.3684 (5) | 0.9628 (2) | 0.0445 (11) | |
H8 | 0.6020 | 0.3780 | 0.9985 | 0.053* | |
C9 | 0.5212 (2) | 0.2402 (6) | 0.9716 (3) | 0.0520 (13) | |
H9 | 0.5253 | 0.1625 | 1.0138 | 0.062* | |
C10 | 0.4700 (2) | 0.2279 (5) | 0.9178 (3) | 0.0491 (12) | |
H10 | 0.4387 | 0.1424 | 0.9232 | 0.059* | |
C11 | 0.4654 (2) | 0.3423 (6) | 0.8565 (3) | 0.0465 (11) | |
H11 | 0.4308 | 0.3322 | 0.8197 | 0.056* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.0291 (2) | 0.0362 (2) | 0.0269 (2) | 0.000 | −0.00588 (19) | 0.000 |
S2 | 0.0355 (6) | 0.0497 (7) | 0.0265 (5) | −0.0025 (6) | −0.0008 (4) | 0.0002 (5) |
N1 | 0.0246 (16) | 0.0403 (19) | 0.0257 (17) | −0.0062 (15) | −0.0016 (14) | 0.0016 (16) |
C12 | 0.032 (2) | 0.055 (3) | 0.027 (2) | 0.000 (2) | −0.0072 (18) | −0.001 (2) |
N3 | 0.043 (2) | 0.0398 (19) | 0.0289 (17) | −0.0012 (18) | −0.0090 (17) | 0.0029 (15) |
O1 | 0.065 (2) | 0.047 (2) | 0.0442 (18) | 0.0116 (16) | −0.0022 (15) | −0.0107 (15) |
O2 | 0.0329 (15) | 0.059 (2) | 0.0322 (15) | −0.0061 (14) | −0.0076 (12) | 0.0112 (14) |
O3 | 0.0464 (18) | 0.077 (2) | 0.0296 (16) | −0.0113 (17) | 0.0048 (14) | 0.0037 (16) |
O4 | 0.066 (2) | 0.168 (4) | 0.102 (3) | 0.043 (3) | −0.025 (2) | −0.068 (3) |
C1 | 0.0245 (18) | 0.044 (2) | 0.034 (2) | 0.0008 (16) | −0.004 (2) | −0.004 (2) |
C2 | 0.024 (2) | 0.037 (2) | 0.034 (2) | 0.0001 (18) | −0.0021 (18) | −0.0005 (19) |
C3 | 0.042 (3) | 0.062 (3) | 0.032 (2) | −0.007 (2) | 0.001 (2) | −0.004 (2) |
C4 | 0.053 (3) | 0.070 (3) | 0.043 (3) | −0.020 (3) | −0.002 (2) | −0.019 (2) |
C5 | 0.048 (3) | 0.058 (3) | 0.062 (3) | −0.026 (3) | 0.002 (2) | −0.011 (3) |
C6 | 0.042 (2) | 0.057 (3) | 0.045 (3) | −0.012 (2) | 0.001 (2) | 0.000 (3) |
C7 | 0.035 (2) | 0.036 (2) | 0.029 (2) | −0.0003 (19) | −0.0025 (18) | −0.0014 (18) |
C8 | 0.052 (3) | 0.047 (3) | 0.035 (2) | 0.006 (2) | −0.011 (2) | 0.005 (2) |
C9 | 0.081 (4) | 0.037 (3) | 0.038 (3) | 0.002 (2) | −0.007 (2) | 0.010 (2) |
C10 | 0.071 (3) | 0.036 (3) | 0.040 (3) | −0.013 (2) | −0.005 (2) | 0.001 (2) |
C11 | 0.055 (3) | 0.045 (3) | 0.039 (3) | −0.013 (2) | −0.010 (2) | 0.004 (2) |
Cd1—O2i | 2.267 (3) | C1—C6 | 1.375 (5) |
Cd1—O2 | 2.267 (3) | C1—C2 | 1.390 (5) |
Cd1—N3i | 2.313 (3) | C2—C3 | 1.383 (5) |
Cd1—N3 | 2.313 (3) | C3—C4 | 1.374 (6) |
Cd1—N1i | 2.405 (3) | C3—H3 | 0.9300 |
Cd1—N1 | 2.405 (3) | C4—C5 | 1.367 (6) |
S2—O3 | 1.442 (3) | C4—H4 | 0.9300 |
S2—O1 | 1.449 (3) | C5—C6 | 1.381 (6) |
S2—O2 | 1.469 (3) | C5—H5 | 0.9300 |
S2—C1 | 1.779 (4) | C6—H6 | 0.9300 |
N1—C12 | 1.272 (5) | C7—C8 | 1.377 (5) |
N1—C2 | 1.431 (5) | C8—C9 | 1.376 (6) |
C12—C7 | 1.461 (5) | C8—H8 | 0.9300 |
C12—H12 | 0.9300 | C9—C10 | 1.368 (6) |
N3—C11 | 1.340 (5) | C9—H9 | 0.9300 |
N3—C7 | 1.349 (5) | C10—C11 | 1.359 (6) |
O4—H1W | 0.8502 | C10—H10 | 0.9300 |
O4—H2W | 0.8263 | C11—H11 | 0.9300 |
O2i—Cd1—O2 | 107.31 (15) | C6—C1—S2 | 119.3 (4) |
O2i—Cd1—N3i | 145.88 (11) | C2—C1—S2 | 120.2 (3) |
O2—Cd1—N3i | 91.52 (11) | C3—C2—C1 | 118.7 (4) |
O2i—Cd1—N3 | 91.52 (11) | C3—C2—N1 | 121.9 (4) |
O2—Cd1—N3 | 145.88 (11) | C1—C2—N1 | 119.3 (3) |
N3i—Cd1—N3 | 87.74 (16) | C4—C3—C2 | 120.7 (4) |
O2i—Cd1—N1i | 82.58 (10) | C4—C3—H3 | 119.6 |
O2—Cd1—N1i | 85.04 (10) | C2—C3—H3 | 119.6 |
N3i—Cd1—N1i | 70.73 (11) | C5—C4—C3 | 120.0 (4) |
N3—Cd1—N1i | 126.32 (11) | C5—C4—H4 | 120.0 |
O2i—Cd1—N1 | 85.04 (10) | C3—C4—H4 | 120.0 |
O2—Cd1—N1 | 82.58 (10) | C4—C5—C6 | 120.4 (4) |
N3i—Cd1—N1 | 126.32 (11) | C4—C5—H5 | 119.8 |
N3—Cd1—N1 | 70.73 (11) | C6—C5—H5 | 119.8 |
N1i—Cd1—N1 | 159.04 (16) | C1—C6—C5 | 119.6 (5) |
O3—S2—O1 | 115.11 (19) | C1—C6—H6 | 120.2 |
O3—S2—O2 | 111.07 (17) | C5—C6—H6 | 120.2 |
O1—S2—O2 | 111.26 (18) | N3—C7—C8 | 121.7 (4) |
O3—S2—C1 | 107.40 (18) | N3—C7—C12 | 117.0 (4) |
O1—S2—C1 | 106.80 (18) | C8—C7—C12 | 121.3 (4) |
O2—S2—C1 | 104.47 (17) | C9—C8—C7 | 118.8 (4) |
C12—N1—C2 | 120.8 (3) | C9—C8—H8 | 120.6 |
C12—N1—Cd1 | 114.4 (3) | C7—C8—H8 | 120.6 |
C2—N1—Cd1 | 124.8 (2) | C10—C9—C8 | 119.4 (4) |
N1—C12—C7 | 121.1 (4) | C10—C9—H9 | 120.3 |
N1—C12—H12 | 119.5 | C8—C9—H9 | 120.3 |
C7—C12—H12 | 119.5 | C11—C10—C9 | 119.2 (4) |
C11—N3—C7 | 118.2 (3) | C11—C10—H10 | 120.4 |
C11—N3—Cd1 | 124.8 (3) | C9—C10—H10 | 120.4 |
C7—N3—Cd1 | 116.9 (3) | N3—C11—C10 | 122.7 (4) |
S2—O2—Cd1 | 115.56 (15) | N3—C11—H11 | 118.6 |
H1W—O4—H2W | 105.8 | C10—C11—H11 | 118.6 |
C6—C1—C2 | 120.5 (4) | ||
O2i—Cd1—N1—C12 | 93.5 (3) | O2—S2—C1—C6 | −113.1 (3) |
O2—Cd1—N1—C12 | −158.3 (3) | O3—S2—C1—C2 | −174.9 (3) |
N3i—Cd1—N1—C12 | −71.9 (3) | O1—S2—C1—C2 | −50.9 (3) |
N3—Cd1—N1—C12 | 0.1 (3) | O2—S2—C1—C2 | 67.1 (3) |
N1i—Cd1—N1—C12 | 147.4 (3) | C6—C1—C2—C3 | −1.2 (6) |
O2i—Cd1—N1—C2 | −82.9 (3) | S2—C1—C2—C3 | 178.6 (3) |
O2—Cd1—N1—C2 | 25.3 (3) | C6—C1—C2—N1 | 175.8 (3) |
N3i—Cd1—N1—C2 | 111.7 (3) | S2—C1—C2—N1 | −4.3 (5) |
N3—Cd1—N1—C2 | −176.3 (3) | C12—N1—C2—C3 | −39.6 (5) |
N1i—Cd1—N1—C2 | −29.0 (3) | Cd1—N1—C2—C3 | 136.5 (3) |
C2—N1—C12—C7 | 175.6 (3) | C12—N1—C2—C1 | 143.4 (4) |
Cd1—N1—C12—C7 | −0.9 (5) | Cd1—N1—C2—C1 | −40.4 (4) |
O2i—Cd1—N3—C11 | 91.9 (3) | C1—C2—C3—C4 | 1.4 (6) |
O2—Cd1—N3—C11 | −143.3 (3) | N1—C2—C3—C4 | −175.5 (4) |
N3i—Cd1—N3—C11 | −53.9 (3) | C2—C3—C4—C5 | −0.4 (7) |
N1i—Cd1—N3—C11 | 10.0 (4) | C3—C4—C5—C6 | −0.9 (7) |
N1—Cd1—N3—C11 | 176.1 (3) | C2—C1—C6—C5 | −0.1 (6) |
O2i—Cd1—N3—C7 | −83.5 (3) | S2—C1—C6—C5 | −179.9 (3) |
O2—Cd1—N3—C7 | 41.3 (4) | C4—C5—C6—C1 | 1.1 (7) |
N3i—Cd1—N3—C7 | 130.7 (3) | C11—N3—C7—C8 | 0.9 (6) |
N1i—Cd1—N3—C7 | −165.4 (2) | Cd1—N3—C7—C8 | 176.6 (3) |
N1—Cd1—N3—C7 | 0.7 (3) | C11—N3—C7—C12 | −177.2 (4) |
O3—S2—O2—Cd1 | 168.04 (16) | Cd1—N3—C7—C12 | −1.4 (4) |
O1—S2—O2—Cd1 | 38.4 (2) | N1—C12—C7—N3 | 1.6 (6) |
C1—S2—O2—Cd1 | −76.5 (2) | N1—C12—C7—C8 | −176.5 (4) |
O2i—Cd1—O2—S2 | 118.00 (19) | N3—C7—C8—C9 | −1.3 (6) |
N3i—Cd1—O2—S2 | −90.86 (18) | C12—C7—C8—C9 | 176.7 (4) |
N3—Cd1—O2—S2 | −2.6 (3) | C7—C8—C9—C10 | 0.6 (7) |
N1i—Cd1—O2—S2 | −161.36 (19) | C8—C9—C10—C11 | 0.4 (7) |
N1—Cd1—O2—S2 | 35.59 (17) | C7—N3—C11—C10 | 0.2 (6) |
O3—S2—C1—C6 | 4.9 (4) | Cd1—N3—C11—C10 | −175.2 (3) |
O1—S2—C1—C6 | 128.9 (3) | C9—C10—C11—N3 | −0.9 (7) |
Symmetry code: (i) −x+1, y, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H2W···O3ii | 0.83 | 2.27 | 2.968 (5) | 142 |
O4—H1W···O1 | 0.85 | 2.01 | 2.863 (5) | 179 |
Symmetry code: (ii) −x+3/2, y−1/2, z. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C12H9N2O3S)2]·2H2O |
Mr | 670.98 |
Crystal system, space group | Orthorhombic, Pbcn |
Temperature (K) | 291 |
a, b, c (Å) | 20.255 (4), 7.8924 (17), 16.475 (3) |
V (Å3) | 2633.7 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.04 |
Crystal size (mm) | 0.23 × 0.08 × 0.05 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.798, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 18106, 2443, 1672 |
Rint | 0.075 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.075, 1.04 |
No. of reflections | 2443 |
No. of parameters | 177 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.33, −0.33 |
Computer programs: SMART (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O4—H2W···O3i | 0.83 | 2.27 | 2.968 (5) | 141.8 |
O4—H1W···O1 | 0.85 | 2.01 | 2.863 (5) | 179.3 |
Symmetry code: (i) −x+3/2, y−1/2, z. |
Acknowledgements
This work was funded by the Guangxi Science Foundation of the Guangxi Zhuang Autonomous Region of the People's Republic of China (grant No. 0731053).
References
Bruker (2004). SMART and SAINT. Bruker AXS inc., Madison, Wisconsin, USA. Google Scholar
Cai, C.-X., Ou-Yang, M., Zhao, Z.-Y. & Jiang, Y.-M. (2008). Acta Cryst. E64, m1195. Web of Science CSD CrossRef IUCr Journals Google Scholar
Casella, L. & Gullotti, M. (1986). Inorg. Chem. 25, 1293–1303. CrossRef CAS Web of Science Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title complex (Fig. 1) is isostructural with [Zn(Paba)2].2H2O, whose structure has been described in detail (Cai, et al., 2008). The six-coordinated CdII lies on a crystallographic 2-fold axis of rotation and two deprotonated PabaH anions coordinate to CdII in a facial arrangement as N,N',O-tridentate donor ligands.
The O—H donor group of the guest waters and the S=O acceptor group of the Paba ligands participate in the hydrogen bonding and form a two-dimensional network in the ab plane (Fig. 2).