organic compounds
(E)-2-Chloro-N′-(2-hydroxy-1-naphthylmethylene)benzohydrazide
aDepartment of Pharmacy, The Sheng Jing Hospital of Chinese Medical University, Shenyang 110004, People's Republic of China
*Correspondence e-mail: zhaolm08@126.com
In the structue of the title compound, C18H13ClN2O2, a new Schiff base, the dihedral angle between the benzene and naphthyl ring system mean planes is 22.5 (2)°. The molecule has an E configuration about the C=N bond, and an intramolecular hydrogen bond involving the hydoxyl substituent on the naphthyl ring and the N′ atom of the hydrazide. The is stabilized by intermolecular N—H⋯O hydrogen bonds, forming one-dimensional chains running parallel to the a axis.
Related literature
For background on Schiff base compounds, hydrazone compounds and their biological properties, see: Kucukguzel et al. (2006); Khattab (2005); Karthikeyan et al. (2006); Okabe et al. (1993). For bond distances, see: Allen et al. (1987). For related structures, see: Shan et al. (2008); Fun et al. (2008); Yang (2008); Ma et al. (2008); Diao, Huang et al. (2008); Diao, Zhen et al. (2008); Ejsmont et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808031371/su2067sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808031371/su2067Isup2.hkl
Compound (I) was prepared by dissolving 2-Hydroxy-1-naphthaldehyde (1.0 mmol, 172.3 mg) in methanol (50 ml), then 2-chlorobenzohydrazide (1.0 mmol, 170.2 mg) was added slowly and the mixture kept at reflux with continuous stirring for 3 h. When the solution was cooled to room temperature a colourless crystalline powder appeared. This was filtered off and washed with methanol three times. Recrystallization from absolute methanol yielded block-shaped single crystals suitable for X-ray analysis.
H-atom H2 was located in a difference Fourier map and refined isotropically, with the N–H distance restrained to 0.90 (1) Å. The other H-atoms were placed in calculated positions and treated as riding atoms: O–H = 0.82 Å, C–H = 0.93 Å, with Uiso(H) = 1.2Ueq(C) and 1.5Ueq(O).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C18H13ClN2O2 | F(000) = 672 |
Mr = 324.75 | Dx = 1.427 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
a = 7.2797 (14) Å | Cell parameters from 2129 reflections |
b = 29.148 (6) Å | θ = 2.5–25.3° |
c = 7.6889 (16) Å | µ = 0.26 mm−1 |
β = 112.130 (3)° | T = 298 K |
V = 1511.3 (5) Å3 | Block, colourless |
Z = 4 | 0.32 × 0.27 × 0.26 mm |
Bruker SMART CCD area-detector diffractometer | 3255 independent reflections |
Radiation source: fine-focus sealed tube | 2320 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ω scans | θmax = 27.0°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | h = −9→9 |
Tmin = 0.920, Tmax = 0.935 | k = −31→37 |
8693 measured reflections | l = −9→6 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.044 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0421P)2 + 0.2242P] where P = (Fo2 + 2Fc2)/3 |
3255 reflections | (Δ/σ)max < 0.001 |
213 parameters | Δρmax = 0.21 e Å−3 |
1 restraint | Δρmin = −0.20 e Å−3 |
C18H13ClN2O2 | V = 1511.3 (5) Å3 |
Mr = 324.75 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 7.2797 (14) Å | µ = 0.26 mm−1 |
b = 29.148 (6) Å | T = 298 K |
c = 7.6889 (16) Å | 0.32 × 0.27 × 0.26 mm |
β = 112.130 (3)° |
Bruker SMART CCD area-detector diffractometer | 3255 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2001) | 2320 reflections with I > 2σ(I) |
Tmin = 0.920, Tmax = 0.935 | Rint = 0.036 |
8693 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 1 restraint |
wR(F2) = 0.105 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.21 e Å−3 |
3255 reflections | Δρmin = −0.20 e Å−3 |
213 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.90066 (8) | 0.109541 (17) | 0.58158 (8) | 0.05120 (18) | |
N1 | 0.9283 (2) | 0.28478 (5) | 0.6687 (2) | 0.0368 (4) | |
N2 | 0.8931 (2) | 0.25535 (5) | 0.5185 (2) | 0.0368 (4) | |
O1 | 0.9748 (2) | 0.30053 (5) | 1.0131 (2) | 0.0538 (4) | |
H1 | 0.9791 | 0.2855 | 0.9244 | 0.081* | |
O2 | 1.10008 (19) | 0.20185 (4) | 0.70363 (18) | 0.0444 (4) | |
C1 | 0.8785 (2) | 0.35871 (6) | 0.7742 (3) | 0.0344 (4) | |
C2 | 0.9227 (3) | 0.34426 (6) | 0.9575 (3) | 0.0393 (5) | |
C3 | 0.9128 (3) | 0.37438 (7) | 1.0959 (3) | 0.0474 (5) | |
H3 | 0.9382 | 0.3637 | 1.2167 | 0.057* | |
C4 | 0.8661 (3) | 0.41905 (8) | 1.0537 (3) | 0.0513 (6) | |
H4 | 0.8594 | 0.4386 | 1.1467 | 0.062* | |
C5 | 0.8273 (3) | 0.43664 (7) | 0.8724 (3) | 0.0451 (5) | |
C6 | 0.7811 (4) | 0.48343 (8) | 0.8286 (4) | 0.0652 (7) | |
H6 | 0.7739 | 0.5032 | 0.9210 | 0.078* | |
C7 | 0.7473 (4) | 0.49996 (8) | 0.6555 (5) | 0.0782 (9) | |
H7 | 0.7179 | 0.5309 | 0.6294 | 0.094* | |
C8 | 0.7564 (4) | 0.47067 (8) | 0.5156 (4) | 0.0739 (8) | |
H8 | 0.7334 | 0.4823 | 0.3966 | 0.089* | |
C9 | 0.7988 (3) | 0.42509 (7) | 0.5512 (3) | 0.0542 (6) | |
H9 | 0.8043 | 0.4061 | 0.4561 | 0.065* | |
C10 | 0.8341 (3) | 0.40654 (6) | 0.7300 (3) | 0.0388 (5) | |
C11 | 0.8664 (3) | 0.32609 (6) | 0.6287 (3) | 0.0355 (4) | |
H11 | 0.8127 | 0.3352 | 0.5037 | 0.043* | |
C12 | 0.9814 (3) | 0.21388 (6) | 0.5489 (3) | 0.0329 (4) | |
C13 | 0.9258 (2) | 0.18457 (6) | 0.3775 (3) | 0.0317 (4) | |
C14 | 0.8905 (3) | 0.13760 (6) | 0.3788 (3) | 0.0348 (4) | |
C15 | 0.8421 (3) | 0.11196 (7) | 0.2176 (3) | 0.0471 (5) | |
H15 | 0.8181 | 0.0807 | 0.2204 | 0.057* | |
C16 | 0.8291 (3) | 0.13237 (8) | 0.0521 (3) | 0.0529 (6) | |
H16 | 0.7964 | 0.1148 | −0.0565 | 0.064* | |
C17 | 0.8642 (3) | 0.17866 (7) | 0.0464 (3) | 0.0501 (5) | |
H17 | 0.8559 | 0.1924 | −0.0654 | 0.060* | |
C18 | 0.9117 (3) | 0.20441 (6) | 0.2079 (3) | 0.0396 (5) | |
H18 | 0.9349 | 0.2357 | 0.2037 | 0.048* | |
H2 | 0.799 (2) | 0.2634 (6) | 0.4086 (18) | 0.047 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0587 (3) | 0.0436 (3) | 0.0540 (4) | −0.0002 (2) | 0.0242 (3) | 0.0116 (2) |
N1 | 0.0399 (9) | 0.0341 (8) | 0.0326 (9) | 0.0012 (7) | 0.0095 (7) | −0.0065 (7) |
N2 | 0.0402 (9) | 0.0344 (8) | 0.0278 (9) | 0.0059 (7) | 0.0039 (7) | −0.0035 (7) |
O1 | 0.0788 (11) | 0.0439 (8) | 0.0389 (9) | 0.0039 (8) | 0.0224 (8) | 0.0056 (7) |
O2 | 0.0500 (8) | 0.0404 (7) | 0.0294 (8) | 0.0053 (6) | −0.0006 (6) | 0.0002 (6) |
C1 | 0.0308 (9) | 0.0349 (10) | 0.0356 (11) | −0.0021 (8) | 0.0105 (8) | −0.0039 (8) |
C2 | 0.0366 (10) | 0.0419 (11) | 0.0401 (12) | −0.0046 (9) | 0.0154 (9) | −0.0041 (9) |
C3 | 0.0508 (12) | 0.0563 (13) | 0.0383 (12) | −0.0091 (10) | 0.0205 (10) | −0.0107 (10) |
C4 | 0.0491 (12) | 0.0551 (13) | 0.0530 (15) | −0.0102 (10) | 0.0228 (11) | −0.0247 (11) |
C5 | 0.0374 (11) | 0.0402 (11) | 0.0547 (14) | −0.0054 (9) | 0.0141 (10) | −0.0149 (10) |
C6 | 0.0664 (16) | 0.0421 (13) | 0.079 (2) | 0.0021 (11) | 0.0187 (14) | −0.0185 (13) |
C7 | 0.092 (2) | 0.0353 (13) | 0.094 (2) | 0.0088 (12) | 0.0198 (18) | 0.0016 (14) |
C8 | 0.096 (2) | 0.0482 (14) | 0.0684 (19) | 0.0107 (13) | 0.0212 (15) | 0.0119 (13) |
C9 | 0.0691 (15) | 0.0403 (12) | 0.0506 (14) | 0.0050 (10) | 0.0196 (12) | 0.0016 (10) |
C10 | 0.0328 (10) | 0.0354 (10) | 0.0457 (12) | −0.0023 (8) | 0.0120 (9) | −0.0045 (9) |
C11 | 0.0353 (10) | 0.0362 (10) | 0.0318 (10) | −0.0013 (8) | 0.0089 (8) | −0.0015 (8) |
C12 | 0.0338 (10) | 0.0324 (9) | 0.0301 (10) | −0.0017 (8) | 0.0093 (8) | 0.0010 (8) |
C13 | 0.0293 (9) | 0.0341 (9) | 0.0285 (10) | 0.0028 (8) | 0.0074 (8) | −0.0017 (8) |
C14 | 0.0318 (9) | 0.0339 (10) | 0.0361 (11) | 0.0023 (8) | 0.0097 (8) | 0.0005 (8) |
C15 | 0.0470 (12) | 0.0372 (11) | 0.0528 (14) | −0.0003 (9) | 0.0139 (10) | −0.0097 (10) |
C16 | 0.0553 (13) | 0.0575 (14) | 0.0384 (13) | 0.0062 (11) | 0.0091 (10) | −0.0156 (11) |
C17 | 0.0575 (13) | 0.0597 (14) | 0.0326 (12) | 0.0077 (11) | 0.0163 (10) | 0.0002 (10) |
C18 | 0.0434 (11) | 0.0378 (10) | 0.0355 (11) | 0.0037 (9) | 0.0124 (9) | 0.0013 (9) |
Cl1—C14 | 1.737 (2) | C6—H6 | 0.9300 |
N1—C11 | 1.282 (2) | C7—C8 | 1.394 (4) |
N1—N2 | 1.383 (2) | C7—H7 | 0.9300 |
N2—C12 | 1.347 (2) | C8—C9 | 1.368 (3) |
N2—H2 | 0.896 (9) | C8—H8 | 0.9300 |
O1—C2 | 1.353 (2) | C9—C10 | 1.408 (3) |
O1—H1 | 0.8200 | C9—H9 | 0.9300 |
O2—C12 | 1.229 (2) | C11—H11 | 0.9300 |
C1—C2 | 1.388 (3) | C12—C13 | 1.493 (2) |
C1—C10 | 1.443 (3) | C13—C14 | 1.394 (2) |
C1—C11 | 1.445 (3) | C13—C18 | 1.395 (3) |
C2—C3 | 1.402 (3) | C14—C15 | 1.375 (3) |
C3—C4 | 1.354 (3) | C15—C16 | 1.375 (3) |
C3—H3 | 0.9300 | C15—H15 | 0.9300 |
C4—C5 | 1.411 (3) | C16—C17 | 1.377 (3) |
C4—H4 | 0.9300 | C16—H16 | 0.9300 |
C5—C6 | 1.415 (3) | C17—C18 | 1.379 (3) |
C5—C10 | 1.418 (3) | C17—H17 | 0.9300 |
C6—C7 | 1.348 (4) | C18—H18 | 0.9300 |
C11—N1—N2 | 116.37 (16) | C8—C9—H9 | 119.6 |
C12—N2—N1 | 119.02 (15) | C10—C9—H9 | 119.6 |
C12—N2—H2 | 123.0 (13) | C9—C10—C5 | 118.02 (18) |
N1—N2—H2 | 117.4 (13) | C9—C10—C1 | 122.90 (18) |
C2—O1—H1 | 109.5 | C5—C10—C1 | 119.08 (19) |
C2—C1—C10 | 118.55 (17) | N1—C11—C1 | 121.25 (18) |
C2—C1—C11 | 120.65 (17) | N1—C11—H11 | 119.4 |
C10—C1—C11 | 120.71 (17) | C1—C11—H11 | 119.4 |
O1—C2—C1 | 122.49 (17) | O2—C12—N2 | 122.65 (17) |
O1—C2—C3 | 116.01 (18) | O2—C12—C13 | 123.31 (16) |
C1—C2—C3 | 121.50 (19) | N2—C12—C13 | 114.02 (15) |
C4—C3—C2 | 120.0 (2) | C14—C13—C18 | 117.70 (17) |
C4—C3—H3 | 120.0 | C14—C13—C12 | 123.07 (17) |
C2—C3—H3 | 120.0 | C18—C13—C12 | 119.22 (16) |
C3—C4—C5 | 121.66 (19) | C15—C14—C13 | 120.87 (19) |
C3—C4—H4 | 119.2 | C15—C14—Cl1 | 117.58 (15) |
C5—C4—H4 | 119.2 | C13—C14—Cl1 | 121.53 (14) |
C4—C5—C6 | 121.8 (2) | C16—C15—C14 | 120.25 (19) |
C4—C5—C10 | 119.08 (19) | C16—C15—H15 | 119.9 |
C6—C5—C10 | 119.1 (2) | C14—C15—H15 | 119.9 |
C7—C6—C5 | 121.2 (2) | C15—C16—C17 | 120.3 (2) |
C7—C6—H6 | 119.4 | C15—C16—H16 | 119.8 |
C5—C6—H6 | 119.4 | C17—C16—H16 | 119.8 |
C6—C7—C8 | 119.9 (2) | C16—C17—C18 | 119.4 (2) |
C6—C7—H7 | 120.0 | C16—C17—H17 | 120.3 |
C8—C7—H7 | 120.0 | C18—C17—H17 | 120.3 |
C9—C8—C7 | 120.9 (3) | C17—C18—C13 | 121.45 (18) |
C9—C8—H8 | 119.6 | C17—C18—H18 | 119.3 |
C7—C8—H8 | 119.6 | C13—C18—H18 | 119.3 |
C8—C9—C10 | 120.8 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.90 (1) | 1.97 (1) | 2.842 (2) | 164 (2) |
O1—H1···N1 | 0.82 | 1.86 | 2.581 (2) | 146 |
Symmetry code: (i) x−1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C18H13ClN2O2 |
Mr | 324.75 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 7.2797 (14), 29.148 (6), 7.6889 (16) |
β (°) | 112.130 (3) |
V (Å3) | 1511.3 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.26 |
Crystal size (mm) | 0.32 × 0.27 × 0.26 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2001) |
Tmin, Tmax | 0.920, 0.935 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8693, 3255, 2320 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.105, 1.04 |
No. of reflections | 3255 |
No. of parameters | 213 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.21, −0.20 |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.896 (9) | 1.972 (11) | 2.842 (2) | 163.5 (18) |
O1—H1···N1 | 0.82 | 1.86 | 2.581 (2) | 146.2 |
Symmetry code: (i) x−1/2, −y+1/2, z−1/2. |
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Hydrazones and Schiff bases have attracted much attention for their excellent biological properties, especially for their potential pharmacological and antitumor properties (Kucukguzel et al., 2006; Khattab, 2005; Karthikeyan et al., 2006; Okabe et al., 1993). Recently, a large number of hydrazone derivatives have been prepared and structurally characterized (Shan et al., 2008; Fun et al., 2008; Yang, 2008; Ma et al., 2008; Diao, Huang et al., 2008; Diao, Zhen et al., 2008; Ejsmont et al., 2008). As part of an ongoing study, we report herein the crystal structure of the title compound, (I).
The molecular structure of compound (I) is shown in Fig. 1. The bond dstances and angles are normal (Allen et al., 1987). The dihedral angle between the phenyl and naphthyl ring mean planes is 22.5 (2)°. The compound displays an E configuration about the C═N bond, and an intramolecular hydrogen bond involving the hydoxyl substituent on the naphthyl ring and the N-atom of the hydrazide (Table 1). The crystal structure is stabilized by intermolecular N—H···O hydrogen bonds (Table 1), forming one-dimensional chains running parallel to the a axis, Fig. 2.