organic compounds
1,3-Di-4-pyridylpropane–4,4′-oxydibenzoic acid (1/1)
aCollege of Mechanical & Materials Engineering, Three Gorges University, Yichang 443002, People's Republic of China, and bDepartment of Chemistry and Chemical Engineering, ShaanxiKey Laboratory of Chemical Reaction Engineering, Yan'an University, Yan'an 716000, People's Republic of China
*Correspondence e-mail: lidongsheng1@126.com
In the title compound, C13H14N2·C14H10O5, a 1:1 cocrystal of 1,3-di-4-pyridylpropane (bpp) and 4,4′-oxydibenzoic acid (H2oba), the dihedral angle between the two benzene rings of the flexible H2oba molecule is 57.07 (1)°; the two pyridine rings of bpp make a dihedral angle of 27.52 (1)°. Strong intermolecular O—H⋯N hydrogen bonds link the molecules into chains, which are then linked into a three-dimensional network through intermolecular C—H⋯O and π–π stacking interactions [centroid–centroid distance = 3.7838 (3) Å].
Related literature
For the use of co-crystallization reactions in developing new methodologies in supramolecular synthesis, see: Desiraju (2003); Shan et al. (2002). For hydrogen bonding and π–π stacking in molecular synthesis, see: Shattock et al. (2005). For a related structure, see: Ma et al. (2006). An independent determination of this structure is reported in the preceeding paper (Li et al., 2008).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536808034971/fl2224sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808034971/fl2224Isup2.hkl
All chemicals were of reagent grade quality obtained from commercial sources and used without further purification. H2oba (0.5 mmol, 0.129 g), Cd(CH3COO)2.2H2O(1.5 mmol, 0.400 g), bpp(0.5 mmol, 0.099 g) and water (15 ml) were placed in a 25 ml Teflon-lined stainless steel reactor and heated at 453 K for five days, and then cooled slowly to 298 K at which time colourless crystals were obtained.The crystal used for data collection was obtained directly from the reaction mixture on cooling without further re-crystallization.
All H atoms were positioned geometrically (C—H = 0.93 ?and O—H = 0.82 ?) and allowed to ride on their parent atoms, with Uiso(H)values equal to 1.2Ueq(C) or 1.5Ueq(O).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The structure of (I), with the atom-numbering scheme for the asymmetric unit, showing displacement ellipsoids at the 30% probability level. | |
Fig. 2. Supramolecular network formed by hydrogen-bonding and π–π stacking interactions. |
C27H24N2O5 | Z = 2 |
Mr = 456.48 | F(000) = 480 |
Triclinic, P1 | Dx = 1.336 Mg m−3 |
a = 6.8927 (12) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.5788 (19) Å | θ = 1.8–25.1° |
c = 14.974 (3) Å | µ = 0.09 mm−1 |
α = 86.638 (3)° | T = 293 K |
β = 81.205 (3)° | Prism, colorless |
γ = 73.963 (3)° | 0.38 × 0.20 × 0.16 mm |
V = 1134.9 (3) Å3 |
Bruker SMART CCD diffractometer | 3965 independent reflections |
Radiation source: fine-focus sealed tube | 1530 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
ϕ and ω scans | θmax = 25.1°, θmin = 1.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −4→8 |
Tmin = 0.966, Tmax = 0.985 | k = −11→13 |
5767 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.232 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.09P)2 + 0.05P] where P = (Fo2 + 2Fc2)/3 |
3965 reflections | (Δ/σ)max < 0.001 |
309 parameters | Δρmax = 0.64 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C27H24N2O5 | γ = 73.963 (3)° |
Mr = 456.48 | V = 1134.9 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.8927 (12) Å | Mo Kα radiation |
b = 11.5788 (19) Å | µ = 0.09 mm−1 |
c = 14.974 (3) Å | T = 293 K |
α = 86.638 (3)° | 0.38 × 0.20 × 0.16 mm |
β = 81.205 (3)° |
Bruker SMART CCD diffractometer | 3965 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1530 reflections with I > 2σ(I) |
Tmin = 0.966, Tmax = 0.985 | Rint = 0.034 |
5767 measured reflections |
R[F2 > 2σ(F2)] = 0.074 | 0 restraints |
wR(F2) = 0.232 | H-atom parameters constrained |
S = 1.01 | Δρmax = 0.64 e Å−3 |
3965 reflections | Δρmin = −0.22 e Å−3 |
309 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | −0.1091 (7) | −0.1160 (4) | 0.5739 (3) | 0.0694 (12) | |
N2 | 0.6798 (6) | 0.1948 (4) | 0.9734 (2) | 0.0664 (12) | |
O1 | 0.6076 (5) | 0.3326 (3) | 0.2752 (2) | 0.0738 (10) | |
O2 | −0.0318 (6) | 0.1895 (3) | 0.0761 (2) | 0.0776 (11) | |
H2 | −0.1262 | 0.1911 | 0.0483 | 0.116* | |
O3 | −0.1240 (6) | 0.3872 (3) | 0.0493 (2) | 0.0835 (12) | |
O4 | 0.5299 (6) | 0.7923 (3) | 0.5091 (3) | 0.0970 (13) | |
O5 | 0.8627 (5) | 0.7071 (3) | 0.4860 (3) | 0.0918 (12) | |
H5 | 0.8652 | 0.7642 | 0.5152 | 0.138* | |
C1 | 0.6402 (8) | 0.1023 (4) | 0.9399 (3) | 0.0731 (15) | |
H1 | 0.7252 | 0.0259 | 0.9485 | 0.088* | |
C2 | 0.4779 (8) | 0.1132 (4) | 0.8923 (3) | 0.0720 (15) | |
H2A | 0.4552 | 0.0449 | 0.8711 | 0.086* | |
C3 | 0.3505 (7) | 0.2248 (4) | 0.8766 (3) | 0.0563 (12) | |
C4 | 0.3945 (7) | 0.3207 (4) | 0.9109 (3) | 0.0665 (14) | |
H4 | 0.3132 | 0.3982 | 0.9026 | 0.080* | |
C5 | 0.5569 (8) | 0.3026 (4) | 0.9570 (3) | 0.0717 (15) | |
H5A | 0.5836 | 0.3696 | 0.9783 | 0.086* | |
C6 | 0.1679 (7) | 0.2448 (4) | 0.8272 (3) | 0.0726 (15) | |
H6A | 0.0457 | 0.2712 | 0.8707 | 0.087* | |
H6B | 0.1705 | 0.3100 | 0.7837 | 0.087* | |
C7 | 0.1503 (7) | 0.1392 (4) | 0.7780 (3) | 0.0723 (15) | |
H7A | 0.1395 | 0.0749 | 0.8213 | 0.087* | |
H7B | 0.2735 | 0.1103 | 0.7355 | 0.087* | |
C8 | −0.0324 (7) | 0.1698 (4) | 0.7273 (3) | 0.0658 (14) | |
H8A | −0.1547 | 0.1987 | 0.7703 | 0.079* | |
H8B | −0.0214 | 0.2351 | 0.6849 | 0.079* | |
C9 | −0.0580 (7) | 0.0684 (4) | 0.6761 (3) | 0.0579 (13) | |
C10 | −0.2435 (7) | 0.0733 (4) | 0.6501 (3) | 0.0617 (13) | |
H10 | −0.3557 | 0.1381 | 0.6664 | 0.074* | |
C11 | −0.2627 (8) | −0.0177 (5) | 0.6000 (3) | 0.0684 (14) | |
H11 | −0.3895 | −0.0112 | 0.5829 | 0.082* | |
C12 | 0.0675 (8) | −0.1175 (4) | 0.5988 (3) | 0.0741 (15) | |
H12 | 0.1782 | −0.1829 | 0.5818 | 0.089* | |
C13 | 0.1000 (8) | −0.0295 (4) | 0.6480 (3) | 0.0710 (15) | |
H13 | 0.2295 | −0.0365 | 0.6622 | 0.085* | |
C14 | 0.1947 (7) | 0.4155 (4) | 0.1356 (3) | 0.0669 (14) | |
H14 | 0.1244 | 0.4808 | 0.1035 | 0.080* | |
C15 | 0.3456 (8) | 0.4285 (4) | 0.1817 (3) | 0.0679 (14) | |
H15 | 0.3811 | 0.5007 | 0.1787 | 0.081* | |
C16 | 0.4428 (7) | 0.3329 (4) | 0.2322 (3) | 0.0600 (13) | |
C17 | 0.3950 (7) | 0.2251 (4) | 0.2337 (3) | 0.0686 (15) | |
H17 | 0.4633 | 0.1602 | 0.2668 | 0.082* | |
C18 | 0.2452 (7) | 0.2132 (4) | 0.1858 (3) | 0.0642 (14) | |
H18 | 0.2123 | 0.1403 | 0.1876 | 0.077* | |
C19 | 0.1451 (7) | 0.3072 (4) | 0.1360 (3) | 0.0520 (12) | |
C20 | −0.0181 (8) | 0.3011 (5) | 0.0835 (3) | 0.0645 (14) | |
C21 | 0.6111 (8) | 0.4317 (4) | 0.3224 (3) | 0.0572 (12) | |
C22 | 0.4418 (8) | 0.5167 (4) | 0.3598 (3) | 0.0655 (14) | |
H22 | 0.3126 | 0.5129 | 0.3518 | 0.079* | |
C23 | 0.4631 (7) | 0.6079 (4) | 0.4093 (3) | 0.0618 (13) | |
H23 | 0.3483 | 0.6667 | 0.4336 | 0.074* | |
C24 | 0.6554 (7) | 0.6123 (4) | 0.4232 (3) | 0.0533 (12) | |
C25 | 0.8227 (7) | 0.5255 (4) | 0.3868 (3) | 0.0659 (14) | |
H25 | 0.9519 | 0.5276 | 0.3962 | 0.079* | |
C26 | 0.8021 (7) | 0.4350 (4) | 0.3364 (3) | 0.0656 (13) | |
H26 | 0.9168 | 0.3763 | 0.3120 | 0.079* | |
C27 | 0.6727 (9) | 0.7134 (5) | 0.4775 (3) | 0.0678 (14) |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.055 (3) | 0.088 (3) | 0.072 (3) | −0.025 (3) | −0.024 (2) | 0.011 (2) |
N2 | 0.069 (3) | 0.065 (3) | 0.075 (3) | −0.024 (2) | −0.024 (2) | −0.006 (2) |
O1 | 0.070 (2) | 0.069 (2) | 0.090 (3) | −0.0147 (18) | −0.036 (2) | −0.0197 (18) |
O2 | 0.090 (3) | 0.060 (2) | 0.098 (3) | −0.0266 (19) | −0.045 (2) | −0.0052 (17) |
O3 | 0.088 (3) | 0.066 (2) | 0.105 (3) | −0.015 (2) | −0.055 (2) | 0.007 (2) |
O4 | 0.073 (3) | 0.086 (3) | 0.132 (3) | −0.001 (2) | −0.034 (3) | −0.050 (2) |
O5 | 0.071 (3) | 0.096 (3) | 0.119 (3) | −0.026 (2) | −0.027 (2) | −0.041 (2) |
C1 | 0.084 (4) | 0.060 (3) | 0.086 (4) | −0.025 (3) | −0.032 (3) | −0.002 (3) |
C2 | 0.086 (4) | 0.061 (3) | 0.082 (4) | −0.027 (3) | −0.035 (3) | −0.005 (3) |
C3 | 0.058 (3) | 0.056 (3) | 0.058 (3) | −0.019 (3) | −0.011 (3) | −0.011 (2) |
C4 | 0.058 (3) | 0.057 (3) | 0.087 (4) | −0.013 (3) | −0.019 (3) | −0.013 (3) |
C5 | 0.073 (4) | 0.059 (3) | 0.089 (4) | −0.019 (3) | −0.022 (3) | −0.015 (3) |
C6 | 0.068 (4) | 0.072 (3) | 0.083 (4) | −0.021 (3) | −0.020 (3) | −0.014 (3) |
C7 | 0.074 (4) | 0.074 (3) | 0.080 (4) | −0.027 (3) | −0.026 (3) | −0.013 (3) |
C8 | 0.062 (3) | 0.072 (3) | 0.069 (3) | −0.018 (3) | −0.025 (3) | −0.012 (3) |
C9 | 0.058 (4) | 0.067 (3) | 0.053 (3) | −0.018 (3) | −0.020 (3) | −0.004 (2) |
C10 | 0.059 (4) | 0.059 (3) | 0.071 (3) | −0.012 (3) | −0.026 (3) | −0.008 (2) |
C11 | 0.054 (4) | 0.080 (3) | 0.079 (4) | −0.019 (3) | −0.032 (3) | −0.001 (3) |
C12 | 0.062 (4) | 0.071 (3) | 0.084 (4) | −0.007 (3) | −0.008 (3) | −0.019 (3) |
C13 | 0.055 (4) | 0.075 (3) | 0.085 (4) | −0.010 (3) | −0.021 (3) | −0.026 (3) |
C14 | 0.078 (4) | 0.059 (3) | 0.070 (3) | −0.019 (3) | −0.030 (3) | −0.001 (2) |
C15 | 0.079 (4) | 0.063 (3) | 0.077 (4) | −0.033 (3) | −0.029 (3) | −0.003 (3) |
C16 | 0.066 (4) | 0.059 (3) | 0.062 (3) | −0.018 (3) | −0.024 (3) | −0.009 (2) |
C17 | 0.075 (4) | 0.056 (3) | 0.080 (4) | −0.012 (3) | −0.034 (3) | −0.005 (3) |
C18 | 0.074 (4) | 0.047 (3) | 0.080 (4) | −0.021 (3) | −0.027 (3) | −0.003 (2) |
C19 | 0.055 (3) | 0.050 (3) | 0.055 (3) | −0.016 (2) | −0.014 (2) | −0.010 (2) |
C20 | 0.066 (4) | 0.063 (3) | 0.071 (4) | −0.022 (3) | −0.019 (3) | −0.007 (3) |
C21 | 0.062 (4) | 0.058 (3) | 0.059 (3) | −0.021 (3) | −0.021 (3) | −0.002 (2) |
C22 | 0.049 (3) | 0.079 (3) | 0.075 (4) | −0.021 (3) | −0.019 (3) | −0.009 (3) |
C23 | 0.056 (3) | 0.060 (3) | 0.068 (3) | −0.002 (3) | −0.026 (3) | −0.011 (2) |
C24 | 0.057 (3) | 0.060 (3) | 0.050 (3) | −0.020 (3) | −0.017 (3) | −0.005 (2) |
C25 | 0.050 (3) | 0.078 (3) | 0.075 (4) | −0.024 (3) | −0.008 (3) | −0.020 (3) |
C26 | 0.047 (3) | 0.072 (3) | 0.076 (4) | −0.009 (3) | −0.010 (3) | −0.018 (3) |
C27 | 0.065 (4) | 0.070 (4) | 0.075 (4) | −0.019 (3) | −0.025 (3) | −0.007 (3) |
N1—C12 | 1.321 (6) | C9—C13 | 1.372 (6) |
N1—C11 | 1.352 (6) | C9—C10 | 1.379 (5) |
N2—C1 | 1.320 (5) | C10—C11 | 1.375 (6) |
N2—C5 | 1.333 (5) | C10—H10 | 0.9300 |
O1—C16 | 1.387 (5) | C11—H11 | 0.9300 |
O1—C21 | 1.390 (5) | C12—C13 | 1.376 (6) |
O2—C20 | 1.333 (5) | C12—H12 | 0.9300 |
O2—H2 | 0.8200 | C13—H13 | 0.9300 |
O3—C20 | 1.201 (5) | C14—C15 | 1.378 (6) |
O4—C27 | 1.200 (5) | C14—C19 | 1.387 (5) |
O5—C27 | 1.317 (6) | C14—H14 | 0.9300 |
O5—H5 | 0.8200 | C15—C16 | 1.376 (6) |
C1—C2 | 1.388 (6) | C15—H15 | 0.9300 |
C1—H1 | 0.9300 | C16—C17 | 1.374 (6) |
C2—C3 | 1.377 (6) | C17—C18 | 1.384 (6) |
C2—H2A | 0.9300 | C17—H17 | 0.9300 |
C3—C4 | 1.374 (5) | C18—C19 | 1.365 (6) |
C3—C6 | 1.513 (6) | C18—H18 | 0.9300 |
C4—C5 | 1.365 (6) | C19—C20 | 1.487 (6) |
C4—H4 | 0.9300 | C21—C22 | 1.369 (6) |
C5—H5A | 0.9300 | C21—C26 | 1.375 (6) |
C6—C7 | 1.505 (5) | C22—C23 | 1.378 (5) |
C6—H6A | 0.9700 | C22—H22 | 0.9300 |
C6—H6B | 0.9700 | C23—C24 | 1.387 (6) |
C7—C8 | 1.518 (6) | C23—H23 | 0.9300 |
C7—H7A | 0.9700 | C24—C25 | 1.367 (6) |
C7—H7B | 0.9700 | C24—C27 | 1.505 (6) |
C8—C9 | 1.502 (5) | C25—C26 | 1.377 (6) |
C8—H8A | 0.9700 | C25—H25 | 0.9300 |
C8—H8B | 0.9700 | C26—H26 | 0.9300 |
C12—N1—C11 | 114.4 (4) | N1—C12—H12 | 117.5 |
C1—N2—C5 | 116.0 (4) | C13—C12—H12 | 117.5 |
C16—O1—C21 | 121.5 (4) | C9—C13—C12 | 120.3 (5) |
C20—O2—H2 | 109.5 | C9—C13—H13 | 119.9 |
C27—O5—H5 | 109.5 | C12—C13—H13 | 119.9 |
N2—C1—C2 | 123.2 (5) | C15—C14—C19 | 121.6 (4) |
N2—C1—H1 | 118.4 | C15—C14—H14 | 119.2 |
C2—C1—H1 | 118.4 | C19—C14—H14 | 119.2 |
C3—C2—C1 | 120.3 (4) | C16—C15—C14 | 118.8 (4) |
C3—C2—H2A | 119.9 | C16—C15—H15 | 120.6 |
C1—C2—H2A | 119.9 | C14—C15—H15 | 120.6 |
C4—C3—C2 | 116.0 (4) | C17—C16—C15 | 120.3 (4) |
C4—C3—C6 | 120.2 (4) | C17—C16—O1 | 115.6 (4) |
C2—C3—C6 | 123.8 (4) | C15—C16—O1 | 123.7 (4) |
C5—C4—C3 | 120.2 (4) | C16—C17—C18 | 120.0 (4) |
C5—C4—H4 | 119.9 | C16—C17—H17 | 120.0 |
C3—C4—H4 | 119.9 | C18—C17—H17 | 120.0 |
N2—C5—C4 | 124.2 (4) | C19—C18—C17 | 120.7 (4) |
N2—C5—H5A | 117.9 | C19—C18—H18 | 119.6 |
C4—C5—H5A | 117.9 | C17—C18—H18 | 119.6 |
C7—C6—C3 | 116.9 (4) | C18—C19—C14 | 118.5 (4) |
C7—C6—H6A | 108.1 | C18—C19—C20 | 123.6 (4) |
C3—C6—H6A | 108.1 | C14—C19—C20 | 117.9 (4) |
C7—C6—H6B | 108.1 | O3—C20—O2 | 123.2 (4) |
C3—C6—H6B | 108.1 | O3—C20—C19 | 123.7 (5) |
H6A—C6—H6B | 107.3 | O2—C20—C19 | 113.1 (4) |
C6—C7—C8 | 112.9 (4) | C22—C21—C26 | 120.2 (4) |
C6—C7—H7A | 109.0 | C22—C21—O1 | 124.9 (4) |
C8—C7—H7A | 109.0 | C26—C21—O1 | 114.7 (4) |
C6—C7—H7B | 109.0 | C21—C22—C23 | 119.9 (4) |
C8—C7—H7B | 109.0 | C21—C22—H22 | 120.0 |
H7A—C7—H7B | 107.8 | C23—C22—H22 | 120.0 |
C9—C8—C7 | 115.6 (4) | C22—C23—C24 | 120.2 (4) |
C9—C8—H8A | 108.4 | C22—C23—H23 | 119.9 |
C7—C8—H8A | 108.4 | C24—C23—H23 | 119.9 |
C9—C8—H8B | 108.4 | C25—C24—C23 | 119.2 (4) |
C7—C8—H8B | 108.4 | C25—C24—C27 | 122.1 (4) |
H8A—C8—H8B | 107.4 | C23—C24—C27 | 118.7 (5) |
C13—C9—C10 | 116.1 (4) | C24—C25—C26 | 120.8 (4) |
C13—C9—C8 | 123.2 (4) | C24—C25—H25 | 119.6 |
C10—C9—C8 | 120.6 (4) | C26—C25—H25 | 119.6 |
C11—C10—C9 | 120.1 (4) | C21—C26—C25 | 119.7 (5) |
C11—C10—H10 | 120.0 | C21—C26—H26 | 120.1 |
C9—C10—H10 | 120.0 | C25—C26—H26 | 120.1 |
N1—C11—C10 | 124.2 (4) | O4—C27—O5 | 123.2 (5) |
N1—C11—H11 | 117.9 | O4—C27—C24 | 124.1 (5) |
C10—C11—H11 | 117.9 | O5—C27—C24 | 112.7 (5) |
N1—C12—C13 | 125.0 (5) | ||
C5—N2—C1—C2 | −1.8 (7) | C15—C16—C17—C18 | −1.5 (8) |
N2—C1—C2—C3 | 1.2 (8) | O1—C16—C17—C18 | −174.2 (4) |
C1—C2—C3—C4 | −0.4 (7) | C16—C17—C18—C19 | 0.8 (8) |
C1—C2—C3—C6 | −178.7 (5) | C17—C18—C19—C14 | −1.0 (7) |
C2—C3—C4—C5 | 0.4 (7) | C17—C18—C19—C20 | −179.6 (4) |
C6—C3—C4—C5 | 178.8 (4) | C15—C14—C19—C18 | 2.1 (7) |
C1—N2—C5—C4 | 1.8 (7) | C15—C14—C19—C20 | −179.3 (4) |
C3—C4—C5—N2 | −1.1 (8) | C18—C19—C20—O3 | 170.0 (5) |
C4—C3—C6—C7 | 169.8 (4) | C14—C19—C20—O3 | −8.5 (7) |
C2—C3—C6—C7 | −11.9 (7) | C18—C19—C20—O2 | −11.6 (7) |
C3—C6—C7—C8 | −177.5 (4) | C14—C19—C20—O2 | 169.8 (4) |
C6—C7—C8—C9 | 179.6 (4) | C16—O1—C21—C22 | 24.9 (7) |
C7—C8—C9—C13 | −23.0 (7) | C16—O1—C21—C26 | −160.3 (4) |
C7—C8—C9—C10 | 160.9 (4) | C26—C21—C22—C23 | 2.0 (7) |
C13—C9—C10—C11 | 0.9 (7) | O1—C21—C22—C23 | 176.6 (4) |
C8—C9—C10—C11 | 177.2 (4) | C21—C22—C23—C24 | −1.5 (7) |
C12—N1—C11—C10 | −1.6 (7) | C22—C23—C24—C25 | 0.2 (7) |
C9—C10—C11—N1 | 0.8 (7) | C22—C23—C24—C27 | 179.9 (4) |
C11—N1—C12—C13 | 0.8 (7) | C23—C24—C25—C26 | 0.5 (7) |
C10—C9—C13—C12 | −1.7 (7) | C27—C24—C25—C26 | −179.2 (4) |
C8—C9—C13—C12 | −177.9 (4) | C22—C21—C26—C25 | −1.3 (7) |
N1—C12—C13—C9 | 0.9 (8) | O1—C21—C26—C25 | −176.4 (4) |
C19—C14—C15—C16 | −2.8 (8) | C24—C25—C26—C21 | 0.0 (7) |
C14—C15—C16—C17 | 2.4 (8) | C25—C24—C27—O4 | 178.6 (5) |
C14—C15—C16—O1 | 174.5 (4) | C23—C24—C27—O4 | −1.1 (8) |
C21—O1—C16—C17 | −144.3 (4) | C25—C24—C27—O5 | −0.5 (7) |
C21—O1—C16—C15 | 43.3 (7) | C23—C24—C27—O5 | 179.8 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···N2i | 0.82 | 1.86 | 2.679 (5) | 174 |
O5—H5···N1ii | 0.82 | 1.75 | 2.566 (5) | 175 |
C4—H4···O3iii | 0.93 | 2.55 | 3.418 (6) | 155 |
C5—H5A···O3iv | 0.93 | 2.48 | 3.160 (6) | 130 |
C12—H12···O4v | 0.93 | 2.45 | 3.174 (7) | 135 |
Symmetry codes: (i) x−1, y, z−1; (ii) x+1, y+1, z; (iii) −x, −y+1, −z+1; (iv) x+1, y, z+1; (v) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C27H24N2O5 |
Mr | 456.48 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.8927 (12), 11.5788 (19), 14.974 (3) |
α, β, γ (°) | 86.638 (3), 81.205 (3), 73.963 (3) |
V (Å3) | 1134.9 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.38 × 0.20 × 0.16 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.966, 0.985 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5767, 3965, 1530 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.597 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.074, 0.232, 1.01 |
No. of reflections | 3965 |
No. of parameters | 309 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.64, −0.22 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H2···N2i | 0.82 | 1.86 | 2.679 (5) | 173.6 |
O5—H5···N1ii | 0.82 | 1.75 | 2.566 (5) | 175.4 |
C4—H4···O3iii | 0.93 | 2.55 | 3.418 (6) | 154.7 |
C5—H5A···O3iv | 0.93 | 2.48 | 3.160 (6) | 130.3 |
C12—H12···O4v | 0.93 | 2.45 | 3.174 (7) | 135.0 |
Symmetry codes: (i) x−1, y, z−1; (ii) x+1, y+1, z; (iii) −x, −y+1, −z+1; (iv) x+1, y, z+1; (v) x, y−1, z. |
Acknowledgements
This work was financially supported by the National Natural Science Foundation of China (No. 20773104), the Program for New Century Excellent Talents in Universities (NCET-06–0891), the Key Project of the Chinese Ministry of Education (208143) and the Important Project of Hubei Provincial Education Office (09HB81).
References
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Co-crystallization reactions provide helpful means for probing the importance and balance between different intermolecular interactions, and thus offer practical guidelines for developing new methodologies in supramolecular synthesis (Desiraju,2003; Shan et al., 2002). The role of hydrogen bonding and π–π stacking for these purposes is well established (Shattock et al.,2005). We attempted to synthesize a CdII complex with the mixed ligand using hydrothermal synthesis conditions. However, we were not successful and a new co-crystal, (bpp)(H2oba)(I), was isolated instead and its structure is reported here. A similar structure has been reported (Ma et al., 2006) and an independent determination of the structure of (I) is reported in the preceeding paper (Li et al., 2008).
The asymmetric unit consists of one bpp and one H2oba as shown in Fig 1. The dihedral angle between the two phenyl rings of the flexible H2oba molecule is 57.07°, while it is 27.52° for the two phenyl rings of the bpp. The COOH group(O4—C27—O5) is co-planar with the phenyl ring and the other COOH group(O2—C20—O3) is slightly twisted with a the twist angle is 10.507 (8)°. In (I), the protonated carboxylate O2 of the flexible H2oba molecule forms two kinds of strong intermolecular hydrogen bonds with atoms N1 and N2 of the bpp molecule (Table 1), linking the molecules into one-dimensional chains. C—H···O hydrogen bonds involving the bpp carbon atoms (C4,C5 and C12) and uncoordinated carboxy oxygen atoms (O3 and O4) provide additional attractive forces between adjacent chains. Furthermore, there are π-π aromatic stacking interactions involving bpp ligands of adjacent units [centroid-centroid distance = 3.7838 (3) Å] that taken together with the C-H···O interactions form a three-dimensional supramolecular motif (Fig. 2).