organic compounds
4,4′-Dichloro-2,2′-(piperazine-1,4-diyldimethylene)diphenol
aDivision of Natural Sciences, Osaka Kyoiku University, Kashiwara, Osaka 582-8582, Japan
*Correspondence e-mail: kubono@cc.osaka-kyoiku.ac.jp
In the titile compound, C18H20Cl2N2O2, the piperazine ring adopts a chair conformation. The molecule has a non-crystallographic inversion centre in the middle of the piperazine ring at approximate position (3/4, 1/8, 3/8). There are intramolecular O—H⋯N hydrogen bonds forming S(6) ring motifs. Intermolecular C—H⋯O hydrogen bonds generate antiparallel C(5) chain motifs propagating along the b axis, forming sheets parallel to the bc plane with a first-level graph-set S(6)C(5)R66(26).
Related literature
For graph-set notations for hydrogen bonds, see: Bernstein et al. (1995). For the synthesis of a ligand with two piperazine arms, see: Bharathi et al. (2006). For the use of piperazine derivatives as buffers, see: Good et al. (1966). For the monoclinic and orthorhombic polymorphs of a tetrachloro-2,2′-(piperazine-1,4-diyldimethylene)diphenol, see: Kubono & Yokoi (2007). For the structure of 1,4-bis(2-hydroxy-5-methylbenzyl)piperazine, see: Kuppayee et al. (1999).
Experimental
Crystal data
|
Data collection
|
Refinement
|
Data collection: WinAFC (Rigaku/MSC, 2006); cell WinAFC; data reduction: CrystalStructure (Rigaku/MSC, 2006); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: CrystalStructure.
Supporting information
10.1107/S1600536808035769/si2120sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808035769/si2120Isup2.hkl
A mixture of 4-chlorophenol (25.0 g, 194 mmol), piperazine (8.34 g, 97.2 mmol) and paraformaldehyde (5.82 g, 194 mmol) in methanol (80 ml) was refluxed for 6 h. The mixture was cooled to room temperature, then the solvent was evaporated under vacuum. The product was recrystallized from CHCl3—MeOH to give prismatic crystals of (I) [yeild 13.8 g (38.7%); m.p. 515.0–515.4 K]. Analysis calculated for C18H20Cl4N2O2: C 58.86, H 5.49, N 7.63%; found: C 58.50, H 5.44, N 7.55%. 1H-NMR(CDCl3, p.p.m., 400 MHz): 2.68 (brs, 8H, CH2), 3.69 (s, 4H, CH2), 6.75 (d, J = 2.4 Hz, 2H, ArH), 6.96 (s, 2H, ArH), 7.13 (d, J = 2.4 Hz, 2H, ArH), 10.6 (brs, 2H, OH).
The H atoms of the hydroxyl groups were found from a difference Fourier map. The other H atoms were placed at idealized positions with C—H = 0.95 Å. All the H atoms were refined as a riding model with Uiso(H) = 1.2 Ueq(C).
Data collection: WinAFC (Rigaku/MSC, 2006); cell
WinAFC (Rigaku/MSC, 2006); data reduction: CrystalStructure (Rigaku/MSC, 2006); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2006).C18H20Cl2N2O2 | F(000) = 1536.00 |
Mr = 367.26 | Dx = 1.378 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 18 reflections |
a = 14.055 (4) Å | θ = 13.7–16.9° |
b = 21.214 (11) Å | µ = 0.38 mm−1 |
c = 11.873 (3) Å | T = 298 K |
V = 3540 (2) Å3 | Prismatic, colorless |
Z = 8 | 0.18 × 0.13 × 0.13 mm |
Rigaku AFC-7R diffractometer | θmax = 27.5° |
ω scans | h = −10→18 |
5928 measured reflections | k = 0→27 |
4066 independent reflections | l = −8→15 |
2735 reflections with F2 > 2σ(F2) | 3 standard reflections every 150 reflections |
Rint = 0.039 | intensity decay: 0.7% |
Refinement on F2 | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.039 | w = 1/[0.0011Fo2 + σ(Fo2)]/(4Fo2) |
wR(F2) = 0.105 | (Δ/σ)max < 0.001 |
S = 1.00 | Δρmax = 0.33 e Å−3 |
2739 reflections | Δρmin = −0.45 e Å−3 |
237 parameters |
C18H20Cl2N2O2 | V = 3540 (2) Å3 |
Mr = 367.26 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 14.055 (4) Å | µ = 0.38 mm−1 |
b = 21.214 (11) Å | T = 298 K |
c = 11.873 (3) Å | 0.18 × 0.13 × 0.13 mm |
Rigaku AFC-7R diffractometer | Rint = 0.039 |
5928 measured reflections | 3 standard reflections every 150 reflections |
4066 independent reflections | intensity decay: 0.7% |
2735 reflections with F2 > 2σ(F2) |
R[F2 > 2σ(F2)] = 0.039 | 237 parameters |
wR(F2) = 0.105 | All H-atom parameters refined |
S = 1.00 | Δρmax = 0.33 e Å−3 |
2739 reflections | Δρmin = −0.45 e Å−3 |
Geometry. The molecule adopts a non-crystallographic inversion centre in the middle of the piperazine ring at an approximate position (3/4, 1/8, 3/8). |
Refinement. Refinement was performed using reflections with F2 > 2.0 σ(F2). The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt). |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.43588 (6) | 0.27754 (4) | −0.07209 (8) | 0.0807 (3) | |
Cl2 | 1.07341 (7) | −0.01127 (5) | 0.83011 (9) | 0.0914 (4) | |
O1 | 0.75085 (15) | 0.11534 (9) | 0.07111 (17) | 0.0559 (7) | |
O2 | 0.74244 (15) | 0.13266 (9) | 0.67705 (18) | 0.0643 (8) | |
N1 | 0.73683 (16) | 0.16416 (11) | 0.2758 (2) | 0.0385 (7) | |
N2 | 0.77032 (17) | 0.08768 (10) | 0.4717 (2) | 0.0385 (8) | |
C1 | 0.6764 (2) | 0.15283 (15) | 0.0418 (2) | 0.0435 (10) | |
C2 | 0.6298 (2) | 0.14079 (15) | −0.0579 (2) | 0.0506 (11) | |
C3 | 0.5560 (2) | 0.17790 (18) | −0.0936 (2) | 0.0558 (12) | |
C4 | 0.5283 (2) | 0.22809 (16) | −0.0274 (3) | 0.0526 (12) | |
C5 | 0.5720 (2) | 0.24037 (15) | 0.0734 (2) | 0.0477 (11) | |
C6 | 0.6466 (2) | 0.20327 (14) | 0.1097 (2) | 0.0398 (10) | |
C7 | 0.6988 (2) | 0.21952 (13) | 0.2166 (2) | 0.0459 (10) | |
C8 | 0.8043 (2) | 0.18345 (14) | 0.3642 (2) | 0.0483 (10) | |
C9 | 0.8455 (2) | 0.12615 (13) | 0.4217 (2) | 0.0465 (10) | |
C10 | 0.7022 (2) | 0.06864 (13) | 0.3845 (2) | 0.0451 (10) | |
C11 | 0.6609 (2) | 0.12632 (13) | 0.3279 (2) | 0.0466 (10) | |
C12 | 0.8101 (2) | 0.03329 (13) | 0.5321 (2) | 0.0476 (10) | |
C13 | 0.8583 (2) | 0.05200 (14) | 0.6408 (2) | 0.0381 (10) | |
C14 | 0.9375 (2) | 0.01930 (13) | 0.6786 (2) | 0.0451 (11) | |
C15 | 0.9773 (2) | 0.03340 (15) | 0.7820 (3) | 0.0505 (11) | |
C16 | 0.9415 (2) | 0.08039 (17) | 0.8475 (2) | 0.0544 (12) | |
C17 | 0.8640 (2) | 0.11345 (15) | 0.8107 (3) | 0.0563 (12) | |
C18 | 0.8214 (2) | 0.09977 (14) | 0.7088 (2) | 0.0432 (11) | |
H1 | 0.7660 | 0.1247 | 0.1381 | 0.067* | |
H2 | 0.6488 | 0.1057 | −0.1022 | 0.061* | |
H3 | 0.5249 | 0.1702 | −0.1632 | 0.067* | |
H4 | 0.5506 | 0.2748 | 0.1178 | 0.057* | |
H5 | 0.6569 | 0.2415 | 0.2656 | 0.055* | |
H6 | 0.7510 | 0.2460 | 0.1977 | 0.055* | |
H7 | 0.8537 | 0.2074 | 0.3303 | 0.058* | |
H8 | 0.7724 | 0.2085 | 0.4187 | 0.058* | |
H9 | 0.8880 | 0.1390 | 0.4795 | 0.056* | |
H10 | 0.8790 | 0.1019 | 0.3674 | 0.056* | |
H11 | 0.7338 | 0.0442 | 0.3288 | 0.054* | |
H12 | 0.6530 | 0.0443 | 0.4178 | 0.054* | |
H13 | 0.6301 | 0.1509 | 0.3839 | 0.056* | |
H14 | 0.6161 | 0.1145 | 0.2718 | 0.056* | |
H15 | 0.7599 | 0.0047 | 0.5485 | 0.057* | |
H16 | 0.8557 | 0.0132 | 0.4853 | 0.057* | |
H17 | 0.9651 | −0.0127 | 0.6331 | 0.054* | |
H18 | 0.9701 | 0.0897 | 0.9181 | 0.065* | |
H19 | 0.8387 | 0.1466 | 0.8555 | 0.068* | |
H20 | 0.7346 | 0.1261 | 0.6069 | 0.077* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0581 (6) | 0.0946 (8) | 0.0893 (8) | 0.0015 (5) | −0.0153 (6) | 0.0291 (5) |
Cl2 | 0.0782 (7) | 0.1153 (8) | 0.0806 (8) | 0.0288 (6) | −0.0241 (6) | −0.0050 (6) |
O1 | 0.0720 (15) | 0.0498 (13) | 0.0459 (15) | 0.0121 (12) | −0.0003 (12) | −0.0089 (12) |
O2 | 0.0803 (17) | 0.0591 (14) | 0.0534 (17) | 0.0224 (13) | −0.0010 (13) | −0.0097 (12) |
N1 | 0.0419 (15) | 0.0361 (14) | 0.0377 (17) | −0.0053 (13) | −0.0039 (13) | 0.0012 (13) |
N2 | 0.0441 (16) | 0.0304 (14) | 0.0410 (17) | −0.0081 (13) | −0.0031 (13) | 0.0035 (13) |
C1 | 0.049 (2) | 0.041 (2) | 0.040 (2) | −0.0044 (18) | 0.0014 (18) | 0.0048 (18) |
C2 | 0.064 (2) | 0.050 (2) | 0.037 (2) | −0.014 (2) | 0.005 (2) | 0.0001 (19) |
C3 | 0.059 (2) | 0.067 (2) | 0.041 (2) | −0.025 (2) | −0.008 (2) | 0.007 (2) |
C4 | 0.043 (2) | 0.058 (2) | 0.057 (2) | −0.0100 (19) | −0.004 (2) | 0.018 (2) |
C5 | 0.045 (2) | 0.047 (2) | 0.051 (2) | −0.0007 (18) | 0.002 (2) | 0.0018 (18) |
C6 | 0.049 (2) | 0.040 (2) | 0.031 (2) | −0.0032 (17) | 0.0062 (17) | −0.0026 (17) |
C7 | 0.058 (2) | 0.0411 (19) | 0.039 (2) | 0.0042 (17) | 0.0026 (18) | −0.0027 (16) |
C8 | 0.059 (2) | 0.044 (2) | 0.041 (2) | −0.0142 (18) | −0.0025 (18) | −0.0003 (17) |
C9 | 0.050 (2) | 0.045 (2) | 0.045 (2) | −0.0105 (18) | −0.0053 (17) | −0.0001 (18) |
C10 | 0.046 (2) | 0.039 (2) | 0.050 (2) | −0.0127 (16) | −0.0053 (18) | 0.0023 (16) |
C11 | 0.045 (2) | 0.051 (2) | 0.044 (2) | −0.0080 (17) | −0.0043 (16) | −0.0036 (17) |
C12 | 0.058 (2) | 0.0357 (19) | 0.049 (2) | −0.0029 (16) | 0.0037 (18) | −0.0009 (16) |
C13 | 0.049 (2) | 0.0341 (19) | 0.031 (2) | −0.0020 (17) | 0.0026 (17) | 0.0038 (16) |
C14 | 0.052 (2) | 0.040 (2) | 0.043 (2) | 0.0028 (18) | 0.011 (2) | −0.0008 (17) |
C15 | 0.050 (2) | 0.054 (2) | 0.048 (2) | 0.0009 (18) | −0.002 (2) | 0.0006 (19) |
C16 | 0.060 (2) | 0.064 (2) | 0.039 (2) | −0.007 (2) | −0.0029 (19) | 0.0019 (19) |
C17 | 0.077 (2) | 0.053 (2) | 0.039 (2) | 0.000 (2) | 0.011 (2) | −0.010 (2) |
C18 | 0.054 (2) | 0.0357 (19) | 0.040 (2) | 0.0063 (17) | 0.0106 (19) | 0.0029 (17) |
Cl1—C4 | 1.751 (3) | C15—C16 | 1.361 (4) |
Cl2—C15 | 1.746 (3) | C16—C17 | 1.367 (5) |
O1—C1 | 1.359 (3) | C17—C18 | 1.381 (4) |
O2—C18 | 1.364 (3) | O1—H1 | 0.848 |
N1—C7 | 1.469 (3) | O2—H20 | 0.852 |
N1—C8 | 1.472 (3) | C2—H2 | 0.950 |
N1—C11 | 1.472 (3) | C3—H3 | 0.950 |
N2—C9 | 1.461 (3) | C5—H4 | 0.950 |
N2—C10 | 1.467 (3) | C7—H5 | 0.950 |
N2—C12 | 1.469 (3) | C7—H6 | 0.950 |
C1—C2 | 1.377 (4) | C8—H7 | 0.950 |
C1—C6 | 1.404 (4) | C8—H8 | 0.950 |
C2—C3 | 1.369 (4) | C9—H9 | 0.950 |
C3—C4 | 1.380 (5) | C9—H10 | 0.950 |
C4—C5 | 1.371 (5) | C10—H11 | 0.950 |
C5—C6 | 1.380 (4) | C10—H12 | 0.950 |
C6—C7 | 1.507 (4) | C11—H13 | 0.950 |
C8—C9 | 1.509 (4) | C11—H14 | 0.950 |
C10—C11 | 1.512 (3) | C12—H15 | 0.950 |
C12—C13 | 1.510 (4) | C12—H16 | 0.950 |
C13—C14 | 1.386 (4) | C14—H17 | 0.950 |
C13—C18 | 1.395 (4) | C16—H18 | 0.950 |
C14—C15 | 1.383 (4) | C17—H19 | 0.950 |
C7—N1—C8 | 110.6 (2) | C2—C3—H3 | 121.3 |
C7—N1—C11 | 111.9 (2) | C4—C3—H3 | 119.9 |
C8—N1—C11 | 108.6 (2) | C4—C5—H4 | 119.2 |
C9—N2—C10 | 109.8 (2) | C6—C5—H4 | 120.4 |
C9—N2—C12 | 111.2 (2) | N1—C7—H5 | 109.0 |
C10—N2—C12 | 112.1 (2) | N1—C7—H6 | 107.8 |
O1—C1—C2 | 118.5 (2) | C6—C7—H5 | 109.0 |
O1—C1—C6 | 121.9 (2) | C6—C7—H6 | 108.1 |
C2—C1—C6 | 119.5 (3) | H5—C7—H6 | 109.5 |
C1—C2—C3 | 121.3 (3) | N1—C8—H7 | 108.5 |
C2—C3—C4 | 118.8 (3) | N1—C8—H8 | 109.8 |
Cl1—C4—C3 | 120.0 (2) | C9—C8—H7 | 110.0 |
Cl1—C4—C5 | 118.9 (2) | C9—C8—H8 | 108.9 |
C3—C4—C5 | 121.1 (3) | H7—C8—H8 | 109.5 |
C4—C5—C6 | 120.3 (3) | N2—C9—H9 | 108.7 |
C1—C6—C5 | 118.8 (2) | N2—C9—H10 | 109.4 |
C1—C6—C7 | 120.9 (2) | C8—C9—H9 | 109.7 |
C5—C6—C7 | 120.2 (2) | C8—C9—H10 | 108.7 |
N1—C7—C6 | 113.4 (2) | H9—C9—H10 | 109.5 |
N1—C8—C9 | 110.2 (2) | N2—C10—H11 | 109.6 |
N2—C9—C8 | 110.9 (2) | N2—C10—H12 | 109.3 |
N2—C10—C11 | 110.0 (2) | C11—C10—H11 | 108.2 |
N1—C11—C10 | 110.5 (2) | C11—C10—H12 | 110.3 |
N2—C12—C13 | 112.4 (2) | H11—C10—H12 | 109.5 |
C12—C13—C14 | 120.3 (2) | N1—C11—H13 | 109.0 |
C12—C13—C18 | 121.3 (2) | N1—C11—H14 | 109.3 |
C14—C13—C18 | 118.3 (2) | C10—C11—H13 | 108.0 |
C13—C14—C15 | 120.3 (2) | C10—C11—H14 | 110.6 |
Cl2—C15—C14 | 119.1 (2) | H13—C11—H14 | 109.5 |
Cl2—C15—C16 | 119.8 (2) | N2—C12—H15 | 108.6 |
C14—C15—C16 | 121.0 (3) | N2—C12—H16 | 108.9 |
C15—C16—C17 | 119.3 (3) | C13—C12—H15 | 109.0 |
C16—C17—C18 | 121.1 (3) | C13—C12—H16 | 108.4 |
O2—C18—C13 | 120.9 (2) | H15—C12—H16 | 109.5 |
O2—C18—C17 | 119.1 (2) | C13—C14—H17 | 120.1 |
C13—C18—C17 | 119.9 (3) | C15—C14—H17 | 119.6 |
C1—O1—H1 | 107.2 | C15—C16—H18 | 119.9 |
C18—O2—H20 | 107.0 | C17—C16—H18 | 120.8 |
C1—C2—H2 | 119.1 | C16—C17—H19 | 119.9 |
C3—C2—H2 | 119.5 | C18—C17—H19 | 118.9 |
C7—N1—C8—C9 | −178.0 (2) | C3—C4—C5—C6 | 1.4 (5) |
C8—N1—C7—C6 | 167.4 (2) | C4—C5—C6—C1 | −0.2 (4) |
C7—N1—C11—C10 | 178.1 (2) | C4—C5—C6—C7 | 175.9 (2) |
C11—N1—C7—C6 | −71.4 (3) | C1—C6—C7—N1 | −34.8 (3) |
C8—N1—C11—C10 | −59.5 (2) | C5—C6—C7—N1 | 149.3 (2) |
C11—N1—C8—C9 | 58.7 (2) | N1—C8—C9—N2 | −58.8 (3) |
C9—N2—C10—C11 | −57.8 (2) | N2—C10—C11—N1 | 59.6 (2) |
C10—N2—C9—C8 | 57.8 (2) | N2—C12—C13—C14 | −146.3 (2) |
C9—N2—C12—C13 | 72.3 (3) | N2—C12—C13—C18 | 37.5 (3) |
C12—N2—C9—C8 | −177.5 (2) | C12—C13—C14—C15 | −175.2 (2) |
C10—N2—C12—C13 | −164.3 (2) | C12—C13—C18—O2 | −2.4 (4) |
C12—N2—C10—C11 | 178.0 (2) | C12—C13—C18—C17 | 176.4 (2) |
O1—C1—C2—C3 | −178.2 (3) | C14—C13—C18—O2 | −178.6 (2) |
O1—C1—C6—C5 | 178.4 (2) | C14—C13—C18—C17 | 0.1 (3) |
O1—C1—C6—C7 | 2.4 (4) | C18—C13—C14—C15 | 1.1 (4) |
C2—C1—C6—C5 | −1.2 (4) | C13—C14—C15—Cl2 | 176.9 (2) |
C2—C1—C6—C7 | −177.2 (2) | C13—C14—C15—C16 | −1.6 (4) |
C6—C1—C2—C3 | 1.4 (5) | Cl2—C15—C16—C17 | −177.5 (2) |
C1—C2—C3—C4 | −0.3 (5) | C14—C15—C16—C17 | 1.0 (5) |
C2—C3—C4—Cl1 | 178.6 (2) | C15—C16—C17—C18 | 0.2 (5) |
C2—C3—C4—C5 | −1.2 (5) | C16—C17—C18—O2 | 178.0 (3) |
Cl1—C4—C5—C6 | −178.4 (2) | C16—C17—C18—C13 | −0.8 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.85 | 1.88 | 2.649 (3) | 150 |
O2—H20···N2 | 0.85 | 1.87 | 2.647 (3) | 151 |
C7—H6···O2i | 0.95 | 2.59 | 3.230 (3) | 125 |
C12—H15···O1ii | 0.95 | 2.57 | 3.300 (3) | 134 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+3/2, −y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C18H20Cl2N2O2 |
Mr | 367.26 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 298 |
a, b, c (Å) | 14.055 (4), 21.214 (11), 11.873 (3) |
V (Å3) | 3540 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.38 |
Crystal size (mm) | 0.18 × 0.13 × 0.13 |
Data collection | |
Diffractometer | Rigaku AFC-7R diffractometer |
Absorption correction | – |
No. of measured, independent and observed [F2 > 2σ(F2)] reflections | 5928, 4066, 2735 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.105, 1.00 |
No. of reflections | 2739 |
No. of parameters | 237 |
No. of restraints | ? |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.33, −0.45 |
Computer programs: WinAFC (Rigaku/MSC, 2006), CrystalStructure (Rigaku/MSC, 2006), SIR92 (Altomare et al., 1993), CRYSTALS (Betteridge et al., 2003), PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.848 | 1.881 | 2.649 (3) | 149.9 |
O2—H20···N2 | 0.852 | 1.868 | 2.647 (3) | 151.2 |
C7—H6···O2i | 0.950 | 2.589 | 3.230 (3) | 125.1 |
C12—H15···O1ii | 0.950 | 2.565 | 3.300 (3) | 134.3 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+3/2, −y, z+1/2. |
Acknowledgements
This study was supported financially in part by Grants-in-Aid (Nos. 19550040 and 20550075) from the Ministry of Education, Culture, Sports, Science, and Technology, Japan.
References
Altomare, A., Cascarano, G., Giacovazzo, C. & Guagliardi, A. (1993). J. Appl. Cryst. 26, 343–350. CrossRef Web of Science IUCr Journals Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Betteridge, P. W., Carruthers, J. R., Cooper, R. I., Prout, K. & Watkin, D. J. (2003). J. Appl. Cryst. 36, 1487. Web of Science CrossRef IUCr Journals Google Scholar
Bharathi, K. S., Rahiman, A. K., Rajesh, K., Sreedaran, S., Aravindan, P. G., Velmurugan, D. & Narayanan, V. (2006). Polyhedron, 25, 2859–2868. Web of Science CSD CrossRef CAS Google Scholar
Good, N. E., Winget, G. D., Winter, W., Connolly, T. N., Izawa, S. & Singh, R. M. (1966). Biochemistry, 5, 467–477. CrossRef CAS PubMed Web of Science Google Scholar
Kubono, K. & Yokoi, K. (2007). Acta Cryst. C63, o535–o537. Web of Science CSD CrossRef IUCr Journals Google Scholar
Kuppayee, M., Kumaran, D., Ponnuswamy, M. N., Kandaswamy, M., Violet, M. J., Chinnakali, K. & Fun, H.-K. (1999). Acta Cryst. C55, 2147–2149. Web of Science CSD CrossRef CAS IUCr Journals Google Scholar
Rigaku/MSC (2006). WinAFC and CrystalStructure. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Piprazine derivatives are widly utilized as buffers, e.g., 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) (Good et al., 1966), and can act as complexing reagents with metal ions (Bharathi et al., 2006).
The molecular structure of the title compound (Fig. 1) (I), consists of two chlorophenol arms and a piperazine ring, which adopt a chair conformation. The molecule has a pseudo-inversion centre in the middle of the piperazine ring at position (3/4, 1/8, 3/8). It is interesting to note that in the polymorh structures of dichlorophenol derivatives (Kubono & Yokoi, 2007) the molecules occupy crystallographic inversion centres (Z' = 1/2). The bond lengths and angles in (I) are normal and comparable with those in the monoclinic and orthorhombic polymorph structures (Kubono & Yokoi, 2007) and in the p-cresol derivative (Kuppayee et al., 1999). Intramolecular O—H···N hydrogen bonds in (I) have similar geometric parameters and higher level graph set notations as was observed in the polymorph structures. The torsion angles C1—C6—C7—N1 and N2—C12—C13—C18 are -34.8 (3) and 37.5 (3) °, respectively. The dihedral angles between the mean planes of two benzene rings are 4.68 (12) °.
In the crystal structure of (I), there are two intermolecular C—H···O hydrogen bonds (Table 1). Atom C7 in the molecule at (x, y, z) acts as hydrogen bond donor to atom O2 in the molecule at (x, 1/2 - y, z - 1/2), so forming a C(5) (Bernstein et al., 1995) chain running parallel to the [010] direction and generated by the c-glide plane at y = 1/4. In addition, atom C12 in the molecule at (x, y, z) acts as hydrogen bond donor to atom O1 atom in the molecule at (3/2 - x, -y, 1/2 + z), so forming a C(5) chain running parallel to the [010] direction and generated by the 21 screw axis along (3/4, 0, z). The molecules are linked by the combination of the two S(6) rings and the two antiparalle C(5) chains into a sheet parallel to b,c-plane with a first level graph set S(6)C(5)R66(26) (Fig. 2).