organic compounds
5-Acetyl-4-(2-chlorophenyl)-6-methyl-3,4-dihydropyrimidin-2(1H)-one
aPG Research Department of Physics, Rajah Serfoji Government College (Autonomous), Thanjavur 613 005, Tamil Nadu, India, bDepartment of Chemistry, Annamalai University, Annamalai Nagar 608 002, Tamilnadu, India, and cDepartment of Chemistry, Howard University, 525 College Street NW, Washington, DC 20059, USA
*Correspondence e-mail: athiru@vsnl.net
In the title molecule, C13H13ClN2O2, the heterocyclic ring adopts a flattened boat conformation with the plane through the four coplanar atoms making a dihedral angle of 89.16 (5)° with the benzene ring, which adopts an axial orientation. The carbonyl, acetyl and methyl groups each have an equatorial orientation. In the intermolecular N—H⋯O hydrogen bonds lead to a tape motif. The H atoms of the methyl group at position 6 are disordered over two positions of opposite orientation.
Related literature
For the biological applications of dihydropyrimidinone derivatives, see: Ghorab et al. (2000); Kappe (1993, 2000); Kappe et al. (1997); Rovnyak et al. (1992, 1995); Shivarama Holla et al. (2004).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2004); cell APEX2; data reduction: SAINT-NT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).
Supporting information
10.1107/S1600536808039366/tk2333sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536808039366/tk2333Isup2.hkl
A solution of acetylacetone (1.0012 g, 0.01 mol), 2-chlorobenzaldehyde (1.4057 g, 0.01 mol) and urea (0.90 g, 0.015 mol) was heated under reflux in the presence of calcium chloride (0.1109 g, 0.001 mol) for 5 h (monitored by TLC). After completion of the reaction, the reaction mixture was cooled to room temperature and poured into crushed ice. The solid product was filtered under suction and purified by
on silica gel. Elution with 1:1 (benzene:ethyl acetate v/v) gave the product in the pure form. Yield 0.79 g (88%).The N-bound H atoms were located in a difference Fourier map and refined isotropically, see Table 1 for bond distances. The remaining H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93 - 0.98 Å and Uiso(H) = 1.2 - 1.5 times Ueq(C). The H atoms bound to the C6-methyl group were found to be disordered over two positions with equal weight.
Data collection: APEXII (Bruker, 2004); cell
APEXII (Bruker, 2004); data reduction: SAINT-NT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: PLATON (Spek, 2003).Fig. 1. The molecular structure of (I), showing the atom-numbering scheme and displacement ellipsoids drawn at the 30% probability level. H atoms are shown as small spheres of arbitrary radius. | |
Fig. 2. The crystal packing of (I), viewed down the c axis. Dashed lines indicate intermolecular contacts. H atoms not involved in hydrogen bonding have been omitted. |
C13H13ClN2O2 | Dx = 1.406 Mg m−3 |
Mr = 264.70 | Melting point: 555.5 K |
Orthorhombic, Pna21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2n | Cell parameters from 6857 reflections |
a = 14.5364 (8) Å | θ = 2.8–25.4° |
b = 12.1587 (5) Å | µ = 0.30 mm−1 |
c = 7.0780 (4) Å | T = 296 K |
V = 1250.99 (11) Å3 | Needle, colourless |
Z = 4 | 0.58 × 0.22 × 0.16 mm |
F(000) = 552 |
Bruker APEXII CCD diffractometer | 3637 independent reflections |
Radiation source: fine-focus sealed tube | 3087 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.043 |
ϕ and ω scans | θmax = 30.1°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | h = −20→20 |
Tmin = 0.845, Tmax = 0.954 | k = −17→16 |
22043 measured reflections | l = −9→9 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.090 | w = 1/[σ2(Fo2) + (0.0429P)2 + 0.1683P] where P = (Fo2 + 2Fc2)/3 |
S = 1.03 | (Δ/σ)max = 0.001 |
3637 reflections | Δρmax = 0.20 e Å−3 |
172 parameters | Δρmin = −0.22 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 1654 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.01 (6) |
C13H13ClN2O2 | V = 1250.99 (11) Å3 |
Mr = 264.70 | Z = 4 |
Orthorhombic, Pna21 | Mo Kα radiation |
a = 14.5364 (8) Å | µ = 0.30 mm−1 |
b = 12.1587 (5) Å | T = 296 K |
c = 7.0780 (4) Å | 0.58 × 0.22 × 0.16 mm |
Bruker APEXII CCD diffractometer | 3637 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | 3087 reflections with I > 2σ(I) |
Tmin = 0.845, Tmax = 0.954 | Rint = 0.043 |
22043 measured reflections |
R[F2 > 2σ(F2)] = 0.037 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.090 | Δρmax = 0.20 e Å−3 |
S = 1.03 | Δρmin = −0.22 e Å−3 |
3637 reflections | Absolute structure: Flack (1983), 1654 Friedel pairs |
172 parameters | Absolute structure parameter: 0.01 (6) |
1 restraint |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1 | 0.55079 (4) | 0.22136 (5) | 1.08117 (7) | 0.0597 (2) | |
O2 | 0.50642 (8) | 0.51312 (9) | 0.62182 (16) | 0.0343 (3) | |
O15 | 0.27723 (11) | 0.09996 (13) | 0.7672 (3) | 0.0774 (6) | |
N1 | 0.42438 (10) | 0.38746 (11) | 0.4557 (2) | 0.0317 (4) | |
N3 | 0.44410 (10) | 0.36578 (10) | 0.7731 (2) | 0.0307 (4) | |
C2 | 0.46183 (10) | 0.42625 (12) | 0.6203 (2) | 0.0272 (4) | |
C4 | 0.41461 (11) | 0.25076 (12) | 0.7555 (2) | 0.0287 (4) | |
C5 | 0.34298 (9) | 0.24351 (12) | 0.6009 (2) | 0.0292 (4) | |
C6 | 0.35395 (10) | 0.31050 (12) | 0.4495 (2) | 0.0292 (4) | |
C15 | 0.27134 (12) | 0.16018 (14) | 0.6294 (3) | 0.0411 (5) | |
C16 | 0.19130 (12) | 0.14572 (17) | 0.4994 (4) | 0.0527 (7) | |
C41 | 0.49732 (11) | 0.17499 (12) | 0.7223 (2) | 0.0289 (4) | |
C42 | 0.56389 (12) | 0.15910 (13) | 0.8612 (3) | 0.0375 (5) | |
C43 | 0.64096 (14) | 0.09425 (16) | 0.8322 (3) | 0.0486 (6) | |
C44 | 0.65258 (14) | 0.04277 (16) | 0.6600 (3) | 0.0484 (6) | |
C45 | 0.58767 (13) | 0.05448 (15) | 0.5208 (3) | 0.0430 (5) | |
C46 | 0.51081 (12) | 0.11989 (13) | 0.5529 (2) | 0.0351 (5) | |
C61 | 0.30143 (13) | 0.31541 (15) | 0.2672 (3) | 0.0423 (5) | |
H1 | 0.4383 (13) | 0.4194 (16) | 0.362 (3) | 0.039 (5)* | |
H3 | 0.4662 (12) | 0.3844 (14) | 0.876 (3) | 0.028 (5)* | |
H4 | 0.38548 | 0.22909 | 0.87471 | 0.0345* | |
H16A | 0.15191 | 0.08874 | 0.54708 | 0.0791* | |
H16B | 0.21307 | 0.12573 | 0.37608 | 0.0791* | |
H16C | 0.15749 | 0.21339 | 0.49164 | 0.0791* | |
H43 | 0.68435 | 0.08551 | 0.92754 | 0.0584* | |
H44 | 0.70457 | 0.00002 | 0.63836 | 0.0581* | |
H45 | 0.59505 | 0.01882 | 0.40558 | 0.0516* | |
H46 | 0.46706 | 0.12694 | 0.45776 | 0.0421* | |
H61A | 0.32656 | 0.37231 | 0.18861 | 0.0635* | 0.500 |
H61B | 0.23793 | 0.33107 | 0.29304 | 0.0635* | 0.500 |
H61C | 0.30619 | 0.24599 | 0.20333 | 0.0635* | 0.500 |
H61D | 0.25389 | 0.26060 | 0.26804 | 0.0635* | 0.500 |
H61E | 0.34252 | 0.30185 | 0.16361 | 0.0635* | 0.500 |
H61F | 0.27426 | 0.38692 | 0.25332 | 0.0635* | 0.500 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0743 (3) | 0.0725 (3) | 0.0323 (2) | 0.0214 (3) | −0.0192 (2) | −0.0082 (2) |
O2 | 0.0433 (6) | 0.0301 (5) | 0.0294 (6) | −0.0071 (4) | −0.0026 (5) | 0.0000 (4) |
O15 | 0.0606 (9) | 0.0728 (10) | 0.0989 (14) | −0.0278 (8) | −0.0217 (9) | 0.0522 (10) |
N1 | 0.0394 (7) | 0.0341 (6) | 0.0216 (6) | −0.0083 (5) | −0.0014 (6) | 0.0039 (5) |
N3 | 0.0430 (8) | 0.0278 (6) | 0.0212 (6) | −0.0006 (5) | −0.0028 (6) | −0.0001 (5) |
C2 | 0.0303 (7) | 0.0269 (6) | 0.0244 (7) | 0.0021 (5) | 0.0006 (5) | 0.0002 (5) |
C4 | 0.0333 (7) | 0.0282 (6) | 0.0247 (7) | −0.0022 (6) | 0.0018 (6) | 0.0040 (5) |
C5 | 0.0250 (6) | 0.0306 (7) | 0.0321 (8) | −0.0014 (5) | 0.0002 (6) | 0.0029 (6) |
C6 | 0.0276 (7) | 0.0312 (7) | 0.0289 (8) | 0.0005 (6) | −0.0009 (6) | −0.0001 (6) |
C15 | 0.0309 (8) | 0.0366 (8) | 0.0558 (12) | −0.0015 (6) | −0.0004 (8) | 0.0099 (8) |
C16 | 0.0332 (9) | 0.0493 (10) | 0.0757 (15) | −0.0123 (8) | −0.0068 (9) | 0.0098 (10) |
C41 | 0.0307 (8) | 0.0268 (6) | 0.0292 (8) | −0.0029 (5) | −0.0010 (6) | 0.0044 (5) |
C42 | 0.0436 (9) | 0.0360 (8) | 0.0328 (8) | 0.0025 (7) | −0.0059 (7) | 0.0011 (7) |
C43 | 0.0448 (10) | 0.0489 (10) | 0.0522 (11) | 0.0116 (8) | −0.0135 (9) | 0.0044 (9) |
C44 | 0.0428 (10) | 0.0409 (9) | 0.0616 (13) | 0.0128 (8) | 0.0011 (9) | −0.0012 (9) |
C45 | 0.0459 (10) | 0.0367 (8) | 0.0465 (10) | 0.0027 (7) | 0.0052 (8) | −0.0087 (7) |
C46 | 0.0381 (8) | 0.0338 (7) | 0.0334 (9) | −0.0009 (6) | −0.0031 (7) | −0.0031 (6) |
C61 | 0.0423 (9) | 0.0493 (10) | 0.0354 (8) | −0.0078 (8) | −0.0091 (8) | 0.0036 (8) |
Cl1—C42 | 1.742 (2) | C43—C44 | 1.381 (3) |
O2—C2 | 1.2393 (18) | C44—C45 | 1.372 (3) |
O15—C15 | 1.223 (3) | C45—C46 | 1.390 (3) |
N1—C2 | 1.370 (2) | C4—H4 | 0.9800 |
N1—C6 | 1.388 (2) | C16—H16A | 0.9600 |
N3—C2 | 1.333 (2) | C16—H16B | 0.9600 |
N3—C4 | 1.4680 (19) | C16—H16C | 0.9600 |
N1—H1 | 0.80 (2) | C43—H43 | 0.9300 |
N3—H3 | 0.83 (2) | C44—H44 | 0.9300 |
C4—C41 | 1.533 (2) | C45—H45 | 0.9300 |
C4—C5 | 1.513 (2) | C46—H46 | 0.9300 |
C5—C6 | 1.355 (2) | C61—H61A | 0.9600 |
C5—C15 | 1.467 (2) | C61—H61B | 0.9600 |
C6—C61 | 1.501 (3) | C61—H61C | 0.9600 |
C15—C16 | 1.494 (3) | C61—H61D | 0.9600 |
C41—C46 | 1.387 (2) | C61—H61E | 0.9600 |
C41—C42 | 1.393 (2) | C61—H61F | 0.9600 |
C42—C43 | 1.385 (3) | ||
Cl1···N3 | 3.2005 (15) | C46···H16Cv | 2.9700 |
Cl1···C46i | 3.6067 (15) | C61···H16B | 2.7500 |
Cl1···O2ii | 3.3462 (13) | C61···H16C | 2.9100 |
Cl1···H4 | 2.8100 | H1···H61A | 2.1100 |
Cl1···H46i | 3.1500 | H1···H61E | 2.4400 |
Cl1···H3 | 2.748 (18) | H1···H61F | 2.5400 |
O2···Cl1iii | 3.3462 (13) | H1···O2iii | 2.05 (2) |
O2···N1ii | 2.8386 (18) | H1···C2iii | 2.93 (2) |
O2···N3iii | 2.9627 (18) | H3···Cl1 | 2.748 (18) |
O15···C45iv | 3.257 (3) | H3···C42 | 3.087 (17) |
O15···C41 | 3.342 (2) | H3···O2ii | 2.18 (2) |
O2···H61Aii | 2.8400 | H3···C2ii | 3.064 (19) |
O2···H1ii | 2.05 (2) | H4···Cl1 | 2.8100 |
O2···H3iii | 2.18 (2) | H4···O15 | 2.3500 |
O2···H16Av | 2.5100 | H4···H61Ei | 2.3100 |
O15···H4 | 2.3500 | H16A···O2vii | 2.5100 |
O15···H44iv | 2.9100 | H16A···C2vii | 2.8200 |
O15···H45iv | 2.5500 | H16B···C6 | 3.0800 |
O15···H61Fvi | 2.7000 | H16B···C61 | 2.7500 |
N1···C41 | 3.370 (2) | H16B···H61B | 2.5900 |
N1···O2iii | 2.8386 (18) | H16B···H61C | 2.3400 |
N3···Cl1 | 3.2005 (15) | H16B···H61D | 1.9000 |
N3···O2ii | 2.9627 (18) | H16B···H44viii | 2.5700 |
C2···C16v | 3.553 (2) | H16C···C61 | 2.9100 |
C6···C46 | 3.333 (2) | H16C···H61B | 2.3200 |
C15···C46 | 3.557 (2) | H16C···H61D | 2.1900 |
C16···C2vii | 3.553 (2) | H16C···C45vii | 3.0100 |
C16···C61 | 3.086 (3) | H16C···C46vii | 2.9700 |
C41···O15 | 3.342 (2) | H44···O15viii | 2.9100 |
C41···N1 | 3.370 (2) | H44···H16Biv | 2.5700 |
C42···C45iv | 3.588 (3) | H45···O15viii | 2.5500 |
C45···C42viii | 3.588 (3) | H45···C41viii | 3.0100 |
C45···O15viii | 3.257 (3) | H46···Cl1ix | 3.1500 |
C46···Cl1ix | 3.6067 (15) | H46···C5 | 2.5100 |
C46···C15 | 3.557 (2) | H46···C6 | 2.7700 |
C46···C6 | 3.333 (2) | H61A···H1 | 2.1100 |
C61···C16 | 3.086 (3) | H61A···O2iii | 2.8400 |
C2···H16Av | 2.8200 | H61B···C16 | 2.7700 |
C2···H1ii | 2.93 (2) | H61B···H16B | 2.5900 |
C2···H3iii | 3.064 (19) | H61B···H16C | 2.3200 |
C5···H46 | 2.5100 | H61B···C45vii | 3.0500 |
C6···H46 | 2.7700 | H61C···C16 | 2.9400 |
C6···H16B | 3.0800 | H61C···H16B | 2.3400 |
C15···H61D | 2.8500 | H61D···C15 | 2.8500 |
C16···H61C | 2.9400 | H61D···C16 | 2.3400 |
C16···H61D | 2.3400 | H61D···H16B | 1.9000 |
C16···H61B | 2.7700 | H61D···H16C | 2.1900 |
C41···H45iv | 3.0100 | H61E···H1 | 2.4400 |
C42···H3 | 3.087 (17) | H61E···H4ix | 2.3100 |
C45···H61Bv | 3.0500 | H61F···H1 | 2.5400 |
C45···H16Cv | 3.0100 | H61F···O15x | 2.7000 |
C2—N1—C6 | 123.53 (13) | C15—C16—H16B | 109.00 |
C2—N3—C4 | 120.87 (13) | C15—C16—H16C | 109.00 |
C2—N1—H1 | 116.1 (14) | H16A—C16—H16B | 109.00 |
C6—N1—H1 | 119.4 (14) | H16A—C16—H16C | 109.00 |
C2—N3—H3 | 119.2 (12) | H16B—C16—H16C | 110.00 |
C4—N3—H3 | 116.7 (12) | C42—C43—H43 | 120.00 |
O2—C2—N3 | 124.35 (14) | C44—C43—H43 | 120.00 |
N1—C2—N3 | 115.05 (13) | C43—C44—H44 | 120.00 |
O2—C2—N1 | 120.58 (13) | C45—C44—H44 | 120.00 |
N3—C4—C5 | 108.53 (12) | C44—C45—H45 | 120.00 |
N3—C4—C41 | 110.89 (13) | C46—C45—H45 | 120.00 |
C5—C4—C41 | 113.20 (12) | C41—C46—H46 | 119.00 |
C4—C5—C15 | 115.43 (13) | C45—C46—H46 | 119.00 |
C6—C5—C15 | 127.40 (14) | C6—C61—H61A | 109.00 |
C4—C5—C6 | 117.12 (13) | C6—C61—H61B | 109.00 |
N1—C6—C5 | 117.84 (13) | C6—C61—H61C | 109.00 |
N1—C6—C61 | 112.07 (13) | C6—C61—H61D | 109.00 |
C5—C6—C61 | 130.09 (14) | C6—C61—H61E | 109.00 |
C5—C15—C16 | 123.34 (17) | C6—C61—H61F | 109.00 |
O15—C15—C5 | 118.27 (17) | H61A—C61—H61B | 109.00 |
O15—C15—C16 | 118.39 (17) | H61A—C61—H61C | 109.00 |
C4—C41—C46 | 122.25 (14) | H61A—C61—H61D | 141.00 |
C42—C41—C46 | 116.41 (15) | H61A—C61—H61E | 56.00 |
C4—C41—C42 | 121.34 (13) | H61A—C61—H61F | 56.00 |
Cl1—C42—C41 | 119.65 (13) | H61B—C61—H61C | 109.00 |
Cl1—C42—C43 | 117.92 (15) | H61B—C61—H61D | 56.00 |
C41—C42—C43 | 122.43 (18) | H61B—C61—H61E | 141.00 |
C42—C43—C44 | 119.20 (19) | H61B—C61—H61F | 56.00 |
C43—C44—C45 | 120.20 (19) | H61C—C61—H61D | 56.00 |
C44—C45—C46 | 119.66 (18) | H61C—C61—H61E | 56.00 |
C41—C46—C45 | 122.08 (16) | H61C—C61—H61F | 141.00 |
N3—C4—H4 | 108.00 | H61D—C61—H61E | 109.00 |
C5—C4—H4 | 108.00 | H61D—C61—H61F | 109.00 |
C41—C4—H4 | 108.00 | H61E—C61—H61F | 109.00 |
C15—C16—H16A | 109.00 | ||
C6—N1—C2—O2 | −161.31 (14) | C15—C5—C6—N1 | 177.02 (15) |
C6—N1—C2—N3 | 16.9 (2) | C15—C5—C6—C61 | −3.7 (3) |
C2—N1—C6—C5 | −23.4 (2) | C4—C5—C15—O15 | −3.9 (2) |
C2—N1—C6—C61 | 157.25 (15) | C4—C5—C15—C16 | 175.71 (16) |
C4—N3—C2—O2 | −162.51 (15) | C6—C5—C15—O15 | 173.16 (17) |
C4—N3—C2—N1 | 19.4 (2) | C6—C5—C15—C16 | −7.3 (3) |
C2—N3—C4—C5 | −44.08 (19) | C4—C41—C42—Cl1 | 2.9 (2) |
C2—N3—C4—C41 | 80.86 (17) | C4—C41—C42—C43 | −177.59 (16) |
N3—C4—C5—C6 | 35.79 (18) | C46—C41—C42—Cl1 | −177.91 (12) |
N3—C4—C5—C15 | −146.88 (14) | C46—C41—C42—C43 | 1.6 (2) |
C41—C4—C5—C6 | −87.77 (16) | C4—C41—C46—C45 | 177.56 (15) |
C41—C4—C5—C15 | 89.56 (16) | C42—C41—C46—C45 | −1.6 (2) |
N3—C4—C41—C42 | 66.67 (18) | Cl1—C42—C43—C44 | 179.21 (15) |
N3—C4—C41—C46 | −112.46 (16) | C41—C42—C43—C44 | −0.3 (3) |
C5—C4—C41—C42 | −171.08 (14) | C42—C43—C44—C45 | −1.1 (3) |
C5—C4—C41—C46 | 9.8 (2) | C43—C44—C45—C46 | 1.0 (3) |
C4—C5—C6—N1 | −6.0 (2) | C44—C45—C46—C41 | 0.4 (3) |
C4—C5—C6—C61 | 173.24 (15) |
Symmetry codes: (i) x, y, z+1; (ii) −x+1, −y+1, z+1/2; (iii) −x+1, −y+1, z−1/2; (iv) −x+1, −y, z+1/2; (v) x+1/2, −y+1/2, z; (vi) −x+1/2, y−1/2, z+1/2; (vii) x−1/2, −y+1/2, z; (viii) −x+1, −y, z−1/2; (ix) x, y, z−1; (x) −x+1/2, y+1/2, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2iii | 0.80 (2) | 2.05 (2) | 2.8386 (18) | 170.6 (19) |
N3—H3···Cl1 | 0.83 (2) | 2.748 (18) | 3.2005 (15) | 116.2 (14) |
N3—H3···O2ii | 0.83 (2) | 2.18 (2) | 2.9627 (18) | 158.6 (16) |
C4—H4···O15 | 0.98 | 2.35 | 2.712 (2) | 101 |
C16—H16A···O2vii | 0.96 | 2.51 | 3.421 (2) | 159 |
C45—H45···O15viii | 0.93 | 2.55 | 3.257 (3) | 133 |
C16—H16C···Cgvii | 0.96 | 2.86 | 3.699 (2) | 147 |
Symmetry codes: (ii) −x+1, −y+1, z+1/2; (iii) −x+1, −y+1, z−1/2; (vii) x−1/2, −y+1/2, z; (viii) −x+1, −y, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | C13H13ClN2O2 |
Mr | 264.70 |
Crystal system, space group | Orthorhombic, Pna21 |
Temperature (K) | 296 |
a, b, c (Å) | 14.5364 (8), 12.1587 (5), 7.0780 (4) |
V (Å3) | 1250.99 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.30 |
Crystal size (mm) | 0.58 × 0.22 × 0.16 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2004) |
Tmin, Tmax | 0.845, 0.954 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 22043, 3637, 3087 |
Rint | 0.043 |
(sin θ/λ)max (Å−1) | 0.706 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.037, 0.090, 1.03 |
No. of reflections | 3637 |
No. of parameters | 172 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.20, −0.22 |
Absolute structure | Flack (1983), 1654 Friedel pairs |
Absolute structure parameter | 0.01 (6) |
Computer programs: APEXII (Bruker, 2004), SAINT-NT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.80 (2) | 2.05 (2) | 2.8386 (18) | 170.6 (19) |
N3—H3···Cl1 | 0.83 (2) | 2.748 (18) | 3.2005 (15) | 116.2 (14) |
N3—H3···O2ii | 0.83 (2) | 2.18 (2) | 2.9627 (18) | 158.6 (16) |
C4—H4···O15 | 0.98 | 2.35 | 2.712 (2) | 101 |
C16—H16A···O2iii | 0.96 | 2.51 | 3.421 (2) | 159 |
C45—H45···O15iv | 0.93 | 2.55 | 3.257 (3) | 133 |
C16—H16C···Cgiii | 0.96 | 2.86 | 3.699 (2) | 147 |
Symmetry codes: (i) −x+1, −y+1, z−1/2; (ii) −x+1, −y+1, z+1/2; (iii) x−1/2, −y+1/2, z; (iv) −x+1, −y, z−1/2. |
Acknowledgements
AT thanks the UGC, India, for the award of a Minor Research Project [File No. MRP-2355/06(UGC-SERO), Link No. 2355, 10/01/2007]. RJB acknowledges the NSF–MRI program for funding to purchase the X-ray CCD diffractometer.
References
Bruker (2004). APEX2, SAINT-NT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Ghorab, M. M., Abdel-Gawad, S. M. & El-Gaby, M. S. A. (2000). Farmaco, 55, 249–255. Web of Science CrossRef PubMed CAS Google Scholar
Kappe, C. O. (1993). Tetrahedron, 49, 6937–6963. CrossRef CAS Google Scholar
Kappe, C. O. (2000). Eur. J. Med. Chem. 35, 1043–1052. Web of Science CrossRef PubMed CAS Google Scholar
Kappe, C. O., Fabian, W. M. F. & Semones, M. A. (1997). Tetrahedron, 53, 2803–2816. CSD CrossRef CAS Google Scholar
Rovnyak, G. C., Atwal, K. S., Hedberg, A., Kimball, S. D., Morebend, S., Gougeutar, J. Z., O'Reilly, B. C. & Malley, M. F. (1992). J. Med. Chem. 35, 3254–3263. CSD CrossRef PubMed CAS Web of Science Google Scholar
Rovnyak, G. C., Kimball, S. D., Beyer, B., Cucinotta, G., Dimarco, J., Gougoutas, D. J. & Moreland, S. (1995). J. Med. Chem. 38, 119–129. CSD CrossRef CAS PubMed Web of Science Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Shivarama Holla, B., Sooryanarayana Rao, B., Sarojini, B. K. & Akberali, P. M. (2004). Eur. J. Med. Chem. 39, 777–783. Web of Science PubMed Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Dihydropyrimidinone derivatives exhibit a wide range of biological effects including anti-fungal, anti-viral, anti-cancer, anti-bacterial, and anti-inflammatory activities (Kappe, 2000; Ghorab et al., 2000; Shivarama Holla et al., 2004). Some dihydropyrimidinones exhibit anti-tumour properties (Kappe, 1993). In addition, these compounds have emerged as the integral backbones of several calcium channel blockers (Rovnyak et al., 1995), antagonists (Kappe et al., 1997) and anti-hypertensive agents (Rovnyak et al., 1992).
In the title molecule, C13H13ClN2O2, (I) & Fig. 1, the heterocyclic ring adopts a flattened boat conformation with the plane through the four co- planar atoms (N3, C2, C5 and C6) forming a dihedral angle of 89.16 (5)° with the benzene ring, which is in an axial orientation. The carbonyl, acetyl and methyl groups are each in an equatorial orientation. Intermolecular N1—H1···O2, N3—H3···O2, C16—H16A···O2 and C45—H45···O15 interactions, and N3—H3···Cl1 and C4—H4···O15 intramolecular contacts are found, Table 1. The N—H···O hydrogen bonding leads to the formation of tapes. Further, a C16—H16C···π interaction is also found involving the benzene (C41—C46) ring. Fig. 2 shows a view of the unit-cell contents.