organic compounds
3-Benzyl-5-butyl-1,3,5-thiadiazinane-2-thione
aInstitute of Chemical Sciences, University of Peshawar, Peshawar 25120, Pakistan, bDepartment of Physics, University of Sargodha, Sargodha, Pakistan, and cDepartment of Chemistry, Government College University, Lahore, Pakistan
*Correspondence e-mail: dmntahir_uos@yahoo.com
In the title compound, C14H20N2S2, the 1,3,5-thiadiazinane-2-thione ring adopts an The S=C bond length is 1.6776 (15) Å, whereas the S—C bond lengths are 1.7470 (15) and 1.8479 (17) Å. The intramolecular C—H⋯S hydrogen bond between the thione and the benzyl units along with the C—H⋯π interaction between the butyl group and the centroid of the benzene ring may be effective in stabilizing the molecule.
Related literature
For the synthesis of the 1,3,5-thiadiazinane-2-thione nucleus, see: Aboul-fadi et al. (2002); Ertan et al. (1991, 1996). For its biological activity, see: Coro et al. (2005). For a related structure, see: Perez et al. (2001). For bond-length data, see: Allen (2002);
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2007); cell APEX2; data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinGX (Farrugia, 1999) and PLATON (Spek, 2003).
Supporting information
10.1107/S1600536809003882/at2719sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809003882/at2719Isup2.hkl
The 1,3,5-thiadizinane thione was synthesized following the synthetic procedure reported by Ertan et al., 1991. Carbon disulfide (20 mmol) was added portion-wise to a magnetically stirred solution of benzylamine (2.18 ml, 20 mmol) and potassium hydroxide (20 mmol) in 30 ml of water. The contents were stirred for 4 h at room temperature. Formaldehyde (37%, 40 mmol) was added to the reaction mixture and stirred for further 1 h. The reaction content was filtered and the filtrate was added drop-wise to a suspension of n-butylamine (1.97 ml, 20 mmol) to the phosphate buffer (pH 7.8) and stirred for 1 h at ambient temperature. The filterate of the reaction mixture was exhaustively extracted with dichloromethane. The aqueous reaction content was acidified with 15% HCl. The precipitated product was filtered off under suction and thoroughly washed with water. The air dried product was re-crystallized from ethanol. A colourless crystalline product [yield: 76%, m.p.: 381–383 K] was obtained.
H-atoms were positioned geometrically, with C—H = 0.93, 0.96 and 0.97 Å for aromatic, methyl and methylene H, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.
Data collection: APEX2 (Bruker, 2007); cell
APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003); software used to prepare material for publication: WinG (Farrugia, 1999) and PLATON (Spek, 2003).C14H20N2S2 | Z = 2 |
Mr = 280.44 | F(000) = 300 |
Triclinic, P1 | Dx = 1.272 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.6559 (2) Å | Cell parameters from 2990 reflections |
b = 9.9586 (3) Å | θ = 2.1–28.7° |
c = 11.1531 (4) Å | µ = 0.35 mm−1 |
α = 66.917 (2)° | T = 296 K |
β = 70.649 (1)° | Prismatic, colourless |
γ = 76.076 (2)° | 0.26 × 0.20 × 0.18 mm |
V = 732.03 (4) Å3 |
Bruker Kappa APEXII CCD diffractometer | 3759 independent reflections |
Radiation source: fine-focus sealed tube | 2990 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
Detector resolution: 7.40 pixels mm-1 | θmax = 28.7°, θmin = 2.1° |
ω scans | h = −10→10 |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | k = −12→13 |
Tmin = 0.922, Tmax = 0.942 | l = −15→14 |
15790 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0507P)2 + 0.1133P] where P = (Fo2 + 2Fc2)/3 |
3759 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C14H20N2S2 | γ = 76.076 (2)° |
Mr = 280.44 | V = 732.03 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.6559 (2) Å | Mo Kα radiation |
b = 9.9586 (3) Å | µ = 0.35 mm−1 |
c = 11.1531 (4) Å | T = 296 K |
α = 66.917 (2)° | 0.26 × 0.20 × 0.18 mm |
β = 70.649 (1)° |
Bruker Kappa APEXII CCD diffractometer | 3759 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2990 reflections with I > 2σ(I) |
Tmin = 0.922, Tmax = 0.942 | Rint = 0.025 |
15790 measured reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.22 e Å−3 |
3759 reflections | Δρmin = −0.20 e Å−3 |
163 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.37143 (5) | 0.10537 (5) | 0.24801 (4) | 0.0559 (1) | |
S2 | 0.72763 (5) | 0.05293 (4) | 0.29926 (4) | 0.0542 (1) | |
N1 | 0.44875 (14) | 0.24375 (12) | 0.38422 (10) | 0.0392 (3) | |
N2 | 0.76229 (15) | 0.27317 (13) | 0.37678 (11) | 0.0446 (3) | |
C1 | 0.25768 (16) | 0.48352 (15) | 0.31596 (13) | 0.0404 (4) | |
C2 | 0.20907 (19) | 0.59310 (17) | 0.37238 (15) | 0.0501 (5) | |
C3 | 0.2155 (3) | 0.73893 (19) | 0.2912 (2) | 0.0663 (6) | |
C4 | 0.2704 (3) | 0.7760 (2) | 0.1528 (2) | 0.0733 (7) | |
C5 | 0.3168 (3) | 0.6681 (2) | 0.09567 (17) | 0.0680 (6) | |
C6 | 0.3104 (2) | 0.52245 (18) | 0.17638 (15) | 0.0525 (5) | |
C7 | 0.25828 (17) | 0.32402 (15) | 0.40427 (14) | 0.0447 (4) | |
C8 | 0.50163 (17) | 0.14720 (14) | 0.32035 (13) | 0.0408 (3) | |
C9 | 0.8377 (2) | 0.12518 (17) | 0.38223 (16) | 0.0541 (5) | |
C10 | 0.56811 (17) | 0.27834 (16) | 0.44744 (13) | 0.0431 (4) | |
C11 | 0.80744 (19) | 0.38248 (16) | 0.24024 (13) | 0.0449 (4) | |
C12 | 0.7732 (2) | 0.53983 (16) | 0.23571 (14) | 0.0488 (4) | |
C13 | 0.8309 (2) | 0.64508 (17) | 0.09273 (15) | 0.0560 (5) | |
C14 | 0.8034 (3) | 0.8041 (2) | 0.0821 (2) | 0.0821 (7) | |
H2 | 0.17173 | 0.56829 | 0.46589 | 0.0601* | |
H3 | 0.18275 | 0.81193 | 0.32993 | 0.0796* | |
H4 | 0.27603 | 0.87410 | 0.09782 | 0.0878* | |
H5 | 0.35270 | 0.69350 | 0.00210 | 0.0817* | |
H6 | 0.34143 | 0.45000 | 0.13712 | 0.0630* | |
H7A | 0.20828 | 0.31702 | 0.49831 | 0.0537* | |
H7B | 0.17844 | 0.27896 | 0.38314 | 0.0537* | |
H9A | 0.82125 | 0.06214 | 0.47607 | 0.0649* | |
H9B | 0.97069 | 0.12161 | 0.33891 | 0.0649* | |
H10A | 0.52272 | 0.37597 | 0.45308 | 0.0516* | |
H10B | 0.55480 | 0.20912 | 0.53898 | 0.0516* | |
H11A | 0.73375 | 0.37322 | 0.18858 | 0.0538* | |
H11B | 0.93788 | 0.36004 | 0.19640 | 0.0538* | |
H12A | 0.84292 | 0.54959 | 0.28969 | 0.0586* | |
H12B | 0.64162 | 0.56520 | 0.27472 | 0.0586* | |
H13A | 0.96161 | 0.61717 | 0.05363 | 0.0672* | |
H13B | 0.75950 | 0.63540 | 0.03977 | 0.0672* | |
H14A | 0.84286 | 0.86437 | −0.01109 | 0.1232* | |
H14B | 0.87606 | 0.81541 | 0.13228 | 0.1232* | |
H14C | 0.67380 | 0.83370 | 0.11828 | 0.1232* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0586 (2) | 0.0591 (2) | 0.0578 (2) | −0.0195 (2) | −0.0143 (2) | −0.0221 (2) |
S2 | 0.0483 (2) | 0.0444 (2) | 0.0635 (3) | 0.0008 (1) | −0.0102 (2) | −0.0197 (2) |
N1 | 0.0350 (5) | 0.0416 (6) | 0.0381 (6) | −0.0065 (4) | −0.0072 (4) | −0.0118 (5) |
N2 | 0.0389 (5) | 0.0526 (7) | 0.0390 (6) | −0.0087 (5) | −0.0112 (4) | −0.0100 (5) |
C1 | 0.0315 (5) | 0.0469 (7) | 0.0422 (7) | −0.0041 (5) | −0.0099 (5) | −0.0150 (6) |
C2 | 0.0469 (7) | 0.0558 (9) | 0.0505 (8) | −0.0020 (6) | −0.0139 (6) | −0.0230 (7) |
C3 | 0.0691 (10) | 0.0496 (9) | 0.0874 (13) | 0.0017 (7) | −0.0303 (9) | −0.0284 (9) |
C4 | 0.0758 (11) | 0.0464 (9) | 0.0843 (14) | −0.0061 (8) | −0.0335 (10) | 0.0005 (9) |
C5 | 0.0694 (10) | 0.0707 (11) | 0.0470 (9) | −0.0072 (8) | −0.0176 (8) | −0.0018 (8) |
C6 | 0.0538 (8) | 0.0582 (9) | 0.0446 (8) | −0.0032 (6) | −0.0131 (6) | −0.0189 (7) |
C7 | 0.0341 (6) | 0.0493 (8) | 0.0443 (7) | −0.0075 (5) | −0.0021 (5) | −0.0148 (6) |
C8 | 0.0415 (6) | 0.0372 (6) | 0.0365 (6) | −0.0109 (5) | −0.0062 (5) | −0.0052 (5) |
C9 | 0.0422 (7) | 0.0555 (9) | 0.0545 (8) | −0.0025 (6) | −0.0164 (6) | −0.0076 (7) |
C10 | 0.0434 (6) | 0.0513 (8) | 0.0331 (6) | −0.0106 (5) | −0.0087 (5) | −0.0115 (6) |
C11 | 0.0448 (6) | 0.0506 (8) | 0.0380 (7) | −0.0121 (5) | −0.0067 (5) | −0.0139 (6) |
C12 | 0.0507 (7) | 0.0533 (8) | 0.0435 (8) | −0.0120 (6) | −0.0096 (6) | −0.0169 (6) |
C13 | 0.0636 (9) | 0.0532 (9) | 0.0485 (8) | −0.0137 (7) | −0.0140 (7) | −0.0116 (7) |
C14 | 0.0893 (13) | 0.0532 (10) | 0.0946 (15) | −0.0123 (9) | −0.0219 (11) | −0.0158 (10) |
S1—C8 | 1.6776 (15) | C3—H3 | 0.9300 |
S2—C8 | 1.7470 (15) | C4—H4 | 0.9300 |
S2—C9 | 1.8479 (17) | C5—H5 | 0.9300 |
N1—C7 | 1.4760 (19) | C6—H6 | 0.9300 |
N1—C8 | 1.3246 (18) | C7—H7A | 0.9700 |
N1—C10 | 1.4899 (18) | C7—H7B | 0.9700 |
N2—C9 | 1.433 (2) | C9—H9A | 0.9700 |
N2—C10 | 1.4326 (19) | C9—H9B | 0.9700 |
N2—C11 | 1.4683 (18) | C10—H10A | 0.9700 |
C1—C2 | 1.383 (2) | C10—H10B | 0.9700 |
C1—C6 | 1.387 (2) | C11—H11A | 0.9700 |
C1—C7 | 1.505 (2) | C11—H11B | 0.9700 |
C2—C3 | 1.380 (3) | C12—H12A | 0.9700 |
C3—C4 | 1.376 (3) | C12—H12B | 0.9700 |
C4—C5 | 1.375 (3) | C13—H13A | 0.9700 |
C5—C6 | 1.378 (3) | C13—H13B | 0.9700 |
C11—C12 | 1.509 (2) | C14—H14A | 0.9600 |
C12—C13 | 1.511 (2) | C14—H14B | 0.9600 |
C13—C14 | 1.508 (3) | C14—H14C | 0.9600 |
C2—H2 | 0.9300 | ||
S1···H6 | 3.1400 | H9A···S1iii | 2.9300 |
S1···H7B | 2.6000 | H9B···S1vi | 2.8800 |
S1···H9Bi | 2.8800 | H9B···H11B | 2.2900 |
S1···H5ii | 3.1600 | H10A···C1 | 2.7100 |
S1···H9Aiii | 2.9300 | H10A···C2 | 2.9400 |
S1···H10Biii | 3.1600 | H10A···C12 | 2.7500 |
S2···H11A | 2.9400 | H10A···H7A | 2.4600 |
N1···H11A | 2.6800 | H10A···H12B | 2.2400 |
C6···C8 | 3.593 (2) | H10B···H9A | 2.2800 |
C8···C11 | 3.374 (2) | H10B···S1iii | 3.1600 |
C8···C6 | 3.593 (2) | H11A···S2 | 2.9400 |
C11···C8 | 3.374 (2) | H11A···N1 | 2.6800 |
C1···H12B | 3.0800 | H11A···C8 | 2.8300 |
C1···H10A | 2.7100 | H11A···H13B | 2.5000 |
C2···H10A | 2.9400 | H11B···H9B | 2.2900 |
C4···H14Bi | 3.0200 | H11B···H13A | 2.4400 |
C5···H13Ai | 3.0900 | H11B···H13Avii | 2.5700 |
C8···H11A | 2.8300 | H12A···H14B | 2.5600 |
C10···H12B | 2.8200 | H12A···H2v | 2.4800 |
C12···H10A | 2.7500 | H12B···C1 | 3.0800 |
C14···H4iv | 3.0800 | H12B···C10 | 2.8200 |
H2···H7A | 2.3400 | H12B···H10A | 2.2400 |
H2···H12Av | 2.4800 | H12B···H14C | 2.5700 |
H4···C14iv | 3.0800 | H13A···C5vi | 3.0900 |
H4···H14Aiv | 2.4500 | H13A···H11B | 2.4400 |
H5···S1ii | 3.1600 | H13A···H11Bvii | 2.5700 |
H6···S1 | 3.1400 | H13B···H11A | 2.5000 |
H7A···H2 | 2.3400 | H14A···H4iv | 2.4500 |
H7A···H10A | 2.4600 | H14B···C4vi | 3.0200 |
H7B···S1 | 2.6000 | H14B···H12A | 2.5600 |
H9A···H10B | 2.2800 | H14C···H12B | 2.5700 |
C8—S2—C9 | 103.11 (7) | N1—C7—H7B | 109.00 |
C7—N1—C8 | 122.01 (12) | C1—C7—H7A | 109.00 |
C7—N1—C10 | 113.20 (11) | C1—C7—H7B | 109.00 |
C8—N1—C10 | 124.74 (12) | H7A—C7—H7B | 108.00 |
C9—N2—C10 | 109.50 (12) | S2—C9—H9A | 109.00 |
C9—N2—C11 | 113.75 (12) | S2—C9—H9B | 109.00 |
C10—N2—C11 | 115.24 (12) | N2—C9—H9A | 109.00 |
C2—C1—C6 | 119.00 (14) | N2—C9—H9B | 109.00 |
C2—C1—C7 | 120.70 (12) | H9A—C9—H9B | 108.00 |
C6—C1—C7 | 120.29 (14) | N1—C10—H10A | 109.00 |
C1—C2—C3 | 120.62 (15) | N1—C10—H10B | 109.00 |
C2—C3—C4 | 119.82 (18) | N2—C10—H10A | 109.00 |
C3—C4—C5 | 120.03 (18) | N2—C10—H10B | 109.00 |
C4—C5—C6 | 120.31 (16) | H10A—C10—H10B | 108.00 |
C1—C6—C5 | 120.21 (16) | N2—C11—H11A | 109.00 |
N1—C7—C1 | 111.22 (11) | N2—C11—H11B | 109.00 |
S1—C8—S2 | 112.92 (8) | C12—C11—H11A | 109.00 |
S1—C8—N1 | 126.10 (11) | C12—C11—H11B | 109.00 |
S2—C8—N1 | 120.94 (11) | H11A—C11—H11B | 108.00 |
S2—C9—N2 | 113.13 (11) | C11—C12—H12A | 109.00 |
N1—C10—N2 | 114.50 (11) | C11—C12—H12B | 109.00 |
N2—C11—C12 | 114.63 (12) | C13—C12—H12A | 109.00 |
C11—C12—C13 | 111.58 (12) | C13—C12—H12B | 109.00 |
C12—C13—C14 | 113.99 (14) | H12A—C12—H12B | 108.00 |
C1—C2—H2 | 120.00 | C12—C13—H13A | 109.00 |
C3—C2—H2 | 120.00 | C12—C13—H13B | 109.00 |
C2—C3—H3 | 120.00 | C14—C13—H13A | 109.00 |
C4—C3—H3 | 120.00 | C14—C13—H13B | 109.00 |
C3—C4—H4 | 120.00 | H13A—C13—H13B | 108.00 |
C5—C4—H4 | 120.00 | C13—C14—H14A | 109.00 |
C4—C5—H5 | 120.00 | C13—C14—H14B | 109.00 |
C6—C5—H5 | 120.00 | C13—C14—H14C | 109.00 |
C1—C6—H6 | 120.00 | H14A—C14—H14B | 109.00 |
C5—C6—H6 | 120.00 | H14A—C14—H14C | 109.00 |
N1—C7—H7A | 109.00 | H14B—C14—H14C | 109.00 |
C9—S2—C8—S1 | 178.01 (8) | C9—N2—C11—C12 | −165.23 (13) |
C9—S2—C8—N1 | −0.05 (12) | C10—N2—C11—C12 | 67.14 (17) |
C8—S2—C9—N2 | −29.53 (12) | C6—C1—C2—C3 | −1.0 (2) |
C8—N1—C7—C1 | −108.21 (14) | C7—C1—C2—C3 | 177.50 (17) |
C10—N1—C7—C1 | 74.18 (14) | C2—C1—C6—C5 | 1.0 (2) |
C7—N1—C8—S1 | 2.68 (19) | C7—C1—C6—C5 | −177.45 (17) |
C7—N1—C8—S2 | −179.54 (10) | C2—C1—C7—N1 | −114.76 (15) |
C10—N1—C8—S1 | −180.00 (10) | C6—C1—C7—N1 | 63.68 (17) |
C10—N1—C8—S2 | −2.21 (18) | C1—C2—C3—C4 | 0.1 (3) |
C7—N1—C10—N2 | −147.79 (12) | C2—C3—C4—C5 | 0.7 (4) |
C8—N1—C10—N2 | 34.68 (18) | C3—C4—C5—C6 | −0.6 (4) |
C10—N2—C9—S2 | 62.06 (13) | C4—C5—C6—C1 | −0.2 (3) |
C11—N2—C9—S2 | −68.49 (15) | N2—C11—C12—C13 | 177.42 (13) |
C9—N2—C10—N1 | −65.65 (15) | C11—C12—C13—C14 | −178.86 (16) |
C11—N2—C10—N1 | 64.09 (17) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z; (iii) −x+1, −y, −z+1; (iv) −x+1, −y+2, −z; (v) −x+1, −y+1, −z+1; (vi) x+1, y, z; (vii) −x+2, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···S1 | 0.97 | 2.60 | 3.0978 (16) | 112 |
C12—H12B···CgA | 0.97 | 2.96 | 3.7937 (19) | 145 |
Experimental details
Crystal data | |
Chemical formula | C14H20N2S2 |
Mr | 280.44 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 296 |
a, b, c (Å) | 7.6559 (2), 9.9586 (3), 11.1531 (4) |
α, β, γ (°) | 66.917 (2), 70.649 (1), 76.076 (2) |
V (Å3) | 732.03 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.26 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.922, 0.942 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15790, 3759, 2990 |
Rint | 0.025 |
(sin θ/λ)max (Å−1) | 0.676 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.100, 1.03 |
No. of reflections | 3759 |
No. of parameters | 163 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.20 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and PLATON (Spek, 2003), WinG (Farrugia, 1999) and PLATON (Spek, 2003).
S1—C8 | 1.6776 (15) | N1—C10 | 1.4899 (18) |
S2—C8 | 1.7470 (15) | N2—C9 | 1.433 (2) |
S2—C9 | 1.8479 (17) | N2—C10 | 1.4326 (19) |
N1—C7 | 1.4760 (19) | N2—C11 | 1.4683 (18) |
N1—C8 | 1.3246 (18) | ||
C8—S2—C9 | 103.11 (7) | N1—C7—C1 | 111.22 (11) |
C7—N1—C8 | 122.01 (12) | S1—C8—S2 | 112.92 (8) |
C7—N1—C10 | 113.20 (11) | S1—C8—N1 | 126.10 (11) |
C8—N1—C10 | 124.74 (12) | S2—C8—N1 | 120.94 (11) |
C9—N2—C10 | 109.50 (12) | S2—C9—N2 | 113.13 (11) |
C9—N2—C11 | 113.75 (12) | N1—C10—N2 | 114.50 (11) |
C10—N2—C11 | 115.24 (12) | N2—C11—C12 | 114.63 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7B···S1 | 0.97 | 2.60 | 3.0978 (16) | 112 |
C12—H12B···CgA | 0.97 | 2.96 | 3.7937 (19) | 145 |
Acknowledgements
The authors acknowledge the Higher Education Commission, Islamabad, Pakistan, for funding the purchase of the diffractometer at GCU, Lahore.
References
Aboul-fadi, T., Hussein, M. A., El-Shorbagi, A. N. & Khalil, A. R. (2002). Arch. Pharm. Med. Chem. 9, 438–442. Google Scholar
Allen, F. H. (2002). Acta Cryst. B58, 380–388. Web of Science CrossRef CAS IUCr Journals Google Scholar
Bruker (2005). SADABS. Bruker AXS Inc. Madison, Wisconsin, USA. Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc. Madison, Wisconsin, USA. Google Scholar
Coro, J., Perez, R., Rodriguez, H., Suarez, M., Vega, C., Rolon, M., Montero, D., Nogal, J. J. & Gomez-Barrio, A. (2005). Bioorg. Med. Chem. 13, 3413–3421. Web of Science CrossRef PubMed CAS Google Scholar
Ertan, M., Ayyildiz, H. G. & Yulug, N. (1991). Arzneim. Forsch. Drug Res. 41, 1182–1185. CAS Google Scholar
Ertan, M., Tayman, A. B. & Yulung, N. (1996). Arch. Pharmacol. 323, 605–609. CrossRef Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1999). J. Appl. Cryst. 32, 837–838. CrossRef CAS IUCr Journals Google Scholar
Perez, R., Suarez, M., Ochoa, E., Rodriguez, H., Martin, N., Seoane, C., Novoa, H., Blaton, N., Peeters, O. M. & De Ranter, C. (2001). Tetrahedron, 57, 7361–7367. Web of Science CSD CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2003). J. Appl. Cryst. 36, 7–13. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
1,3,5-Thiadiazinane-2-thione nucleus is an important pharmacophoric nucleus and large number of its analogs have been synthesized through different synthetic approaches, including amines and carbon disulfide in aqueous KOH, via diathiocarbamate salt intermediate (Ertan et al., 1991), from isothiocyanates and amines (Ertan et al., 1996), and resin supported solid phase organic synthesis (Aboul-fadi et al., 2002). Diverse bioactivities including antibacterial, antifungal, antimycobactarial, antitubercular, antiprotozoal, leishmanicidal, nematocidal and antiviral are reported for this nucleus in the literature (Coro et al., 2005).
The crystal structure of 5-(2-carboxyethyl)-3-(fur-2-ylmethyl)-tetrahydro- 2H-1,3,5-thiadiazine-2-thione (Perez et al., 2001) contains the same heterocyclic ring as the title compound (I), (Fig 1). The heterocyclic ring is in envelop form with the group (N1/C8/S2/C10/C9) in plane and the N2 displaced by -0.6778 (17) Å from it. The dihedral angle between the benzene ring A(C1—C6) and this group is 81.22 (5)°. The CCDC search (Allen et al., 2002) showed that there are very few crystal structures having 1,3,5-thiadiazinane-2-thione nucleus, so some important bond lengths and bond angles are given in Table 1.
There are no indications of intermolecular contacts, however some weak intramolecular H-bonding is given in Table 2 [CgA is a centroid of the phenyl ring C1–C6].