metal-organic compounds
Bis(6′-carboxy-2,2′-bipyridine-6-carboxylato-κ3N,N′,O6)nickel(II) tetrahydrate
aSchool of Chemistry and Chemical Engineering, Inner Mongolia University, Hohhot 010021, People's Republic of China
*Correspondence e-mail: haiquansu@yahoo.com
In the title compound, [Ni(C12H7N2O4)2]·4H2O, the Ni atom is located at the centre of a distorted octahedron, formed by four N atoms and two O atoms from the same two tridentating chelated 6-carboxy-2,2′-bipyridine-6′-carboxylate (L) ligands. Face-to-face π-stacking interactions between inversion-related pyridine rings with centroid–centroid distances of 3.548 (3) and 3.662 (3) Å (perpendicular distances between the respective rings are 3.314 and 3.438 Å) are found. Intermolecular O—H⋯O hydrogen bonds between water molecules and L ligands form R53(10), R65(14) and R55(12) rings and also a centrosymmetric cage-like unit of water molecules, which link eight adjacent NiII centers, forming a three-dimensional framework.
Related literature
For hydrogen-bonding motifs, see: Bernstein et al. (1995). For the structural and photophysical properties of LnIII complexes with the title ligand, see: Bünzli et al. (2000). For a catena-poly diaqua CdII complex with the title ligand, see: Knight et al. (2006). For an explanation of `ligand star', see: Gao et al. (2006). For the structural characterization and fluorescent properties of LnIII complexes with pyridine-2,6-dicarboxylic acid, see: Liu et al. (2008). For the structural and photophysical properties of EuIII complexes with 2,2′-dipyridine-4, 4′-dicarboxylic acid, see: Law et al. (2007). For the structural properties of a metal-organic framework (MOF) based on Pt, Y and 2,2′-bipyridine-5,5′-dicarboxylate, see: Szeto et al. (2006). For a review of the properties of coordination polymer networks via O– and N-atoms, see: Robin & Fromm (2006).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2006) and Mercury (Macrae et al., 2006); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
10.1107/S1600536809006515/si2152sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809006515/si2152Isup2.hkl
The title compound was obtained by the reaction of the mixture of Ni(NO3)2.6H2O, and 2,2'-dipyridine-6,6'-dicarboxylic acid in a molar ratio of 1:0.8 and 10 ml of water under hydrothermal conditions (at 413 K for 6 days and cooled to room temperature with a 5°C h-1 rate). The green block crystals were washed by water, ethanol. (Yield: 68%)
The H atoms were placed in geometrically idealized positions (C—H = 0.95 Å and O—H = 0.82–0.84 Å), with Uiso(H) = 1.2Ueq(C) and Uiso(H) = 1.5Ueq(O).
Data collection: CrystalClear (Rigaku/MSC , 2005); cell
CrystalClear (Rigaku/MSC , 2005); data reduction: CrystalClear (Rigaku/MSC , 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg & Putz, 2006) and Mercury (Macrae et al., 2006); software used to prepare material for publication: publCIF (Westrip, 2009).Fig. 1. The molecule structure of the title compound, with atom labels and 50% probability displacement ellipsoids. | |
Fig. 2. The ligand assisted hydrogen-bond cage like unit in the compound. The two complex units linked with O11 atoms and all the H atoms, have been omitted for clarity. | |
Fig. 3. The packing of the title compound showing hydrogen bonds (dashed lines) holding the molecules together in the crystal structure. The two complex units linked with O11 atoms and all the H atoms, have been omitted for clarity. |
[Ni(C12H7N2O4)2]·4H2O | Z = 2 |
Mr = 617.17 | F(000) = 636 |
Triclinic, P1 | Dx = 1.659 Mg m−3 |
a = 9.990 (2) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 10.896 (2) Å | Cell parameters from 3636 reflections |
c = 12.565 (3) Å | θ = 1.8–27.9° |
α = 112.97 (3)° | µ = 0.86 mm−1 |
β = 100.09 (3)° | T = 113 K |
γ = 90.30 (3)° | Block, green |
V = 1235.7 (4) Å3 | 0.20 × 0.10 × 0.08 mm |
Rigaku Saturn CCD area-detector diffractometer | 4305 independent reflections |
Radiation source: rotating anode | 2745 reflections with I > 2σ(I) |
Confocal monochromator | Rint = 0.126 |
Detector resolution: 7.31 pixels mm-1 | θmax = 25.0°, θmin = 1.8° |
ω and ϕ scans | h = −10→11 |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | k = −12→11 |
Tmin = 0.846, Tmax = 0.934 | l = −14→14 |
7165 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.068 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.211 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.1025P)2] where P = (Fo2 + 2Fc2)/3 |
4305 reflections | (Δ/σ)max < 0.001 |
372 parameters | Δρmax = 0.96 e Å−3 |
0 restraints | Δρmin = −0.75 e Å−3 |
[Ni(C12H7N2O4)2]·4H2O | γ = 90.30 (3)° |
Mr = 617.17 | V = 1235.7 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.990 (2) Å | Mo Kα radiation |
b = 10.896 (2) Å | µ = 0.86 mm−1 |
c = 12.565 (3) Å | T = 113 K |
α = 112.97 (3)° | 0.20 × 0.10 × 0.08 mm |
β = 100.09 (3)° |
Rigaku Saturn CCD area-detector diffractometer | 4305 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005) | 2745 reflections with I > 2σ(I) |
Tmin = 0.846, Tmax = 0.934 | Rint = 0.126 |
7165 measured reflections |
R[F2 > 2σ(F2)] = 0.068 | 0 restraints |
wR(F2) = 0.211 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.96 e Å−3 |
4305 reflections | Δρmin = −0.75 e Å−3 |
372 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.26176 (6) | 0.23748 (6) | 0.25373 (5) | 0.0128 (3) | |
O1 | 0.1825 (4) | 0.4096 (3) | 0.3635 (3) | 0.0170 (9) | |
O2 | 0.0298 (4) | 0.5584 (4) | 0.3582 (3) | 0.0206 (9) | |
O3 | 0.5431 (4) | 0.0527 (4) | 0.2154 (4) | 0.0236 (10) | |
H3 | 0.6006 | 0.0445 | 0.2692 | 0.035* | |
O4 | 0.4382 (5) | −0.1285 (5) | 0.2149 (4) | 0.0463 (15) | |
O5 | 0.1553 (4) | 0.1112 (3) | 0.3108 (3) | 0.0168 (8) | |
O6 | 0.1883 (4) | 0.0088 (4) | 0.4363 (4) | 0.0259 (10) | |
O7 | 0.3576 (4) | 0.2726 (4) | −0.0101 (4) | 0.0279 (10) | |
H7 | 0.3161 | 0.2681 | −0.0759 | 0.042* | |
O8 | 0.2810 (5) | 0.4775 (5) | 0.0577 (5) | 0.0513 (15) | |
N1 | 0.1132 (4) | 0.2644 (4) | 0.1406 (4) | 0.0130 (10) | |
N2 | 0.2678 (4) | 0.0647 (4) | 0.0940 (4) | 0.0113 (9) | |
N3 | 0.3979 (4) | 0.2352 (4) | 0.3886 (4) | 0.0130 (10) | |
N4 | 0.4370 (4) | 0.3585 (4) | 0.2514 (4) | 0.0142 (10) | |
C1 | 0.0871 (5) | 0.4564 (5) | 0.3123 (5) | 0.0161 (12) | |
C2 | 0.0440 (5) | 0.3747 (5) | 0.1788 (5) | 0.0149 (12) | |
C3 | −0.0525 (5) | 0.4060 (5) | 0.1044 (5) | 0.0194 (13) | |
H3A | −0.0980 | 0.4855 | 0.1320 | 0.023* | |
C4 | −0.0825 (5) | 0.3167 (5) | −0.0151 (5) | 0.0192 (13) | |
H4 | −0.1482 | 0.3361 | −0.0696 | 0.023* | |
C5 | −0.0156 (5) | 0.2000 (5) | −0.0527 (5) | 0.0179 (13) | |
H5 | −0.0385 | 0.1370 | −0.1321 | 0.021* | |
C6 | 0.0848 (5) | 0.1768 (5) | 0.0271 (4) | 0.0110 (11) | |
C7 | 0.1705 (5) | 0.0604 (5) | 0.0014 (5) | 0.0108 (11) | |
C8 | 0.1510 (5) | −0.0456 (5) | −0.1094 (5) | 0.0134 (12) | |
H8 | 0.0834 | −0.0443 | −0.1723 | 0.016* | |
C9 | 0.2307 (5) | −0.1519 (5) | −0.1265 (5) | 0.0217 (13) | |
H9 | 0.2192 | −0.2246 | −0.2012 | 0.026* | |
C10 | 0.3280 (5) | −0.1511 (5) | −0.0330 (5) | 0.0188 (13) | |
H10 | 0.3835 | −0.2237 | −0.0422 | 0.023* | |
C11 | 0.3433 (5) | −0.0420 (5) | 0.0749 (5) | 0.0141 (12) | |
C12 | 0.4464 (5) | −0.0429 (5) | 0.1771 (5) | 0.0185 (13) | |
C13 | 0.2244 (6) | 0.0881 (5) | 0.3940 (5) | 0.0188 (13) | |
C14 | 0.3639 (5) | 0.1643 (5) | 0.4469 (5) | 0.0154 (12) | |
C15 | 0.4503 (5) | 0.1663 (5) | 0.5468 (5) | 0.0177 (12) | |
H15 | 0.4258 | 0.1160 | 0.5885 | 0.021* | |
C16 | 0.5741 (5) | 0.2441 (5) | 0.5845 (5) | 0.0172 (12) | |
H16 | 0.6354 | 0.2474 | 0.6527 | 0.021* | |
C17 | 0.6077 (5) | 0.3174 (5) | 0.5216 (5) | 0.0162 (12) | |
H17 | 0.6919 | 0.3705 | 0.5461 | 0.019* | |
C18 | 0.5161 (5) | 0.3109 (5) | 0.4234 (5) | 0.0139 (12) | |
C19 | 0.5397 (5) | 0.3818 (5) | 0.3460 (5) | 0.0142 (12) | |
C20 | 0.6567 (5) | 0.4637 (5) | 0.3709 (5) | 0.0175 (12) | |
H20 | 0.7262 | 0.4751 | 0.4369 | 0.021* | |
C21 | 0.6713 (6) | 0.5292 (5) | 0.2978 (5) | 0.0211 (13) | |
H21 | 0.7510 | 0.5860 | 0.3130 | 0.025* | |
C22 | 0.5682 (6) | 0.5107 (5) | 0.2029 (5) | 0.0215 (13) | |
H22 | 0.5741 | 0.5566 | 0.1531 | 0.026* | |
C23 | 0.4553 (5) | 0.4231 (5) | 0.1817 (5) | 0.0166 (12) | |
C24 | 0.3523 (5) | 0.3942 (5) | 0.0712 (5) | 0.0189 (12) | |
O9 | 0.7524 (3) | 0.0424 (4) | 0.3682 (3) | 0.0213 (9) | |
H9A | 0.8078 | 0.1092 | 0.3909 | 0.026* | |
H9B | 0.7826 | 0.0158 | 0.4206 | 0.026* | |
O10 | 0.0754 (4) | 0.7452 (4) | 0.5945 (3) | 0.0225 (9) | |
H10A | 0.0597 | 0.6738 | 0.5353 | 0.027* | |
H10B | −0.0039 | 0.7536 | 0.6057 | 0.027* | |
O11 | 0.2191 (4) | 0.2207 (4) | 0.7879 (4) | 0.0285 (10) | |
H11A | 0.2309 | 0.1439 | 0.7435 | 0.034* | |
H11B | 0.1365 | 0.2302 | 0.7714 | 0.034* | |
O12 | 0.0448 (4) | 0.7657 (4) | 0.2859 (4) | 0.0331 (11) | |
H12A | 0.0511 | 0.7113 | 0.3179 | 0.040* | |
H12B | 0.0670 | 0.8384 | 0.3429 | 0.040* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0129 (4) | 0.0140 (4) | 0.0094 (4) | 0.0003 (3) | −0.0015 (3) | 0.0039 (3) |
O1 | 0.0182 (19) | 0.019 (2) | 0.011 (2) | 0.0034 (16) | 0.0013 (16) | 0.0030 (16) |
O2 | 0.026 (2) | 0.017 (2) | 0.016 (2) | 0.0074 (17) | 0.0057 (18) | 0.0026 (17) |
O3 | 0.022 (2) | 0.031 (2) | 0.021 (2) | −0.0004 (18) | −0.0032 (18) | 0.0160 (19) |
O4 | 0.049 (3) | 0.057 (3) | 0.041 (3) | −0.021 (2) | −0.018 (3) | 0.039 (3) |
O5 | 0.0155 (18) | 0.0175 (19) | 0.017 (2) | −0.0024 (15) | −0.0002 (16) | 0.0075 (16) |
O6 | 0.026 (2) | 0.028 (2) | 0.025 (2) | −0.0090 (18) | −0.0022 (19) | 0.016 (2) |
O7 | 0.030 (2) | 0.024 (2) | 0.023 (2) | 0.0009 (18) | −0.0092 (19) | 0.0076 (19) |
O8 | 0.056 (3) | 0.030 (3) | 0.047 (3) | 0.015 (2) | −0.022 (3) | 0.005 (2) |
N1 | 0.012 (2) | 0.016 (2) | 0.012 (2) | −0.0013 (18) | 0.0019 (18) | 0.006 (2) |
N2 | 0.011 (2) | 0.015 (2) | 0.008 (2) | 0.0007 (17) | 0.0021 (18) | 0.0052 (18) |
N3 | 0.016 (2) | 0.014 (2) | 0.009 (2) | 0.0040 (18) | 0.0026 (19) | 0.0040 (18) |
N4 | 0.013 (2) | 0.010 (2) | 0.016 (2) | 0.0051 (17) | 0.0036 (19) | 0.0015 (19) |
C1 | 0.019 (3) | 0.013 (3) | 0.013 (3) | 0.000 (2) | 0.001 (2) | 0.003 (2) |
C2 | 0.018 (3) | 0.013 (3) | 0.013 (3) | 0.002 (2) | 0.003 (2) | 0.004 (2) |
C3 | 0.015 (3) | 0.021 (3) | 0.021 (3) | 0.004 (2) | 0.003 (2) | 0.008 (3) |
C4 | 0.017 (3) | 0.023 (3) | 0.017 (3) | 0.005 (2) | −0.001 (2) | 0.010 (2) |
C5 | 0.017 (3) | 0.017 (3) | 0.017 (3) | −0.004 (2) | −0.002 (2) | 0.007 (2) |
C6 | 0.015 (3) | 0.011 (3) | 0.007 (3) | −0.001 (2) | 0.005 (2) | 0.004 (2) |
C7 | 0.010 (2) | 0.011 (2) | 0.012 (3) | 0.001 (2) | 0.004 (2) | 0.004 (2) |
C8 | 0.013 (3) | 0.014 (3) | 0.012 (3) | −0.001 (2) | 0.002 (2) | 0.004 (2) |
C9 | 0.022 (3) | 0.023 (3) | 0.014 (3) | 0.001 (2) | 0.002 (3) | 0.001 (2) |
C10 | 0.021 (3) | 0.018 (3) | 0.016 (3) | 0.006 (2) | 0.002 (2) | 0.005 (2) |
C11 | 0.014 (3) | 0.018 (3) | 0.011 (3) | 0.000 (2) | 0.001 (2) | 0.006 (2) |
C12 | 0.018 (3) | 0.017 (3) | 0.018 (3) | 0.002 (2) | 0.001 (2) | 0.006 (2) |
C13 | 0.022 (3) | 0.022 (3) | 0.012 (3) | 0.002 (2) | −0.002 (2) | 0.008 (2) |
C14 | 0.018 (3) | 0.014 (3) | 0.014 (3) | 0.000 (2) | 0.000 (2) | 0.007 (2) |
C15 | 0.020 (3) | 0.018 (3) | 0.015 (3) | 0.003 (2) | 0.003 (2) | 0.007 (2) |
C16 | 0.019 (3) | 0.023 (3) | 0.009 (3) | 0.002 (2) | −0.002 (2) | 0.007 (2) |
C17 | 0.017 (3) | 0.017 (3) | 0.010 (3) | −0.001 (2) | −0.001 (2) | 0.002 (2) |
C18 | 0.013 (3) | 0.011 (2) | 0.015 (3) | 0.002 (2) | 0.000 (2) | 0.004 (2) |
C19 | 0.016 (3) | 0.011 (3) | 0.011 (3) | 0.003 (2) | 0.003 (2) | −0.001 (2) |
C20 | 0.017 (3) | 0.017 (3) | 0.017 (3) | 0.001 (2) | 0.002 (2) | 0.005 (2) |
C21 | 0.021 (3) | 0.026 (3) | 0.016 (3) | 0.000 (2) | 0.004 (2) | 0.008 (3) |
C22 | 0.024 (3) | 0.019 (3) | 0.020 (3) | −0.001 (2) | 0.007 (3) | 0.006 (2) |
C23 | 0.018 (3) | 0.015 (3) | 0.016 (3) | 0.008 (2) | 0.006 (2) | 0.005 (2) |
C24 | 0.018 (3) | 0.022 (3) | 0.020 (3) | 0.004 (2) | 0.005 (2) | 0.011 (3) |
O9 | 0.019 (2) | 0.022 (2) | 0.021 (2) | 0.0013 (16) | −0.0014 (18) | 0.0083 (18) |
O10 | 0.0187 (19) | 0.025 (2) | 0.019 (2) | 0.0007 (17) | 0.0052 (18) | 0.0025 (18) |
O11 | 0.030 (2) | 0.029 (2) | 0.021 (2) | 0.0026 (19) | −0.0017 (19) | 0.0071 (19) |
O12 | 0.042 (3) | 0.027 (2) | 0.028 (3) | −0.008 (2) | −0.003 (2) | 0.013 (2) |
Ni1—N1 | 1.975 (4) | C7—C8 | 1.399 (7) |
Ni1—N3 | 1.987 (4) | C8—C9 | 1.377 (7) |
Ni1—O1 | 2.104 (4) | C8—H8 | 0.9500 |
Ni1—O5 | 2.136 (4) | C9—C10 | 1.385 (7) |
Ni1—N2 | 2.161 (5) | C9—H9 | 0.9500 |
Ni1—N4 | 2.197 (4) | C10—C11 | 1.394 (7) |
O1—C1 | 1.276 (6) | C10—H10 | 0.9500 |
O2—C1 | 1.231 (6) | C11—C12 | 1.503 (6) |
O3—C12 | 1.299 (6) | C13—C14 | 1.519 (7) |
O3—H3 | 0.8400 | C14—C15 | 1.385 (7) |
O4—C12 | 1.207 (6) | C15—C16 | 1.394 (7) |
O5—C13 | 1.260 (6) | C15—H15 | 0.9500 |
O6—C13 | 1.258 (6) | C16—C17 | 1.399 (7) |
O7—C24 | 1.329 (7) | C16—H16 | 0.9500 |
O7—H7 | 0.8400 | C17—C18 | 1.379 (7) |
O8—C24 | 1.202 (6) | C17—H17 | 0.9500 |
N1—C6 | 1.348 (7) | C18—C19 | 1.505 (7) |
N1—C2 | 1.352 (6) | C19—C20 | 1.379 (8) |
N2—C11 | 1.354 (6) | C20—C21 | 1.390 (7) |
N2—C7 | 1.364 (6) | C20—H20 | 0.9500 |
N3—C14 | 1.332 (7) | C21—C22 | 1.380 (7) |
N3—C18 | 1.339 (6) | C21—H21 | 0.9500 |
N4—C23 | 1.354 (7) | C22—C23 | 1.392 (7) |
N4—C19 | 1.365 (6) | C22—H22 | 0.9500 |
C1—C2 | 1.539 (7) | C23—C24 | 1.496 (7) |
C2—C3 | 1.363 (6) | O9—H9A | 0.8341 |
C3—C4 | 1.410 (8) | O9—H9B | 0.8302 |
C3—H3A | 0.9500 | O10—H10A | 0.8296 |
C4—C5 | 1.392 (7) | O10—H10B | 0.8283 |
C4—H4 | 0.9500 | O11—H11A | 0.8278 |
C5—C6 | 1.387 (6) | O11—H11B | 0.8319 |
C5—H5 | 0.9500 | O12—H12A | 0.8320 |
C6—C7 | 1.495 (7) | O12—H12B | 0.8299 |
N1—Ni1—N3 | 170.11 (18) | C7—C8—H8 | 120.3 |
N1—Ni1—O1 | 78.57 (16) | C8—C9—C10 | 118.9 (5) |
N3—Ni1—O1 | 91.64 (15) | C8—C9—H9 | 120.5 |
N1—Ni1—O5 | 100.61 (15) | C10—C9—H9 | 120.5 |
N3—Ni1—O5 | 78.13 (15) | C9—C10—C11 | 118.9 (5) |
O1—Ni1—O5 | 92.18 (14) | C9—C10—H10 | 120.5 |
N1—Ni1—N2 | 78.15 (17) | C11—C10—H10 | 120.5 |
N3—Ni1—N2 | 111.50 (16) | N2—C11—C10 | 123.5 (4) |
O1—Ni1—N2 | 156.37 (14) | N2—C11—C12 | 117.6 (5) |
O5—Ni1—N2 | 88.21 (15) | C10—C11—C12 | 118.8 (4) |
N1—Ni1—N4 | 103.32 (16) | O4—C12—O3 | 125.4 (5) |
N3—Ni1—N4 | 78.03 (17) | O4—C12—C11 | 121.3 (5) |
O1—Ni1—N4 | 91.03 (15) | O3—C12—C11 | 113.3 (4) |
O5—Ni1—N4 | 156.02 (15) | O6—C13—O5 | 126.1 (5) |
N2—Ni1—N4 | 98.14 (17) | O6—C13—C14 | 117.9 (4) |
C1—O1—Ni1 | 115.9 (3) | O5—C13—C14 | 116.0 (5) |
C12—O3—H3 | 109.5 | N3—C14—C15 | 120.9 (5) |
C13—O5—Ni1 | 114.2 (3) | N3—C14—C13 | 113.2 (4) |
C24—O7—H7 | 109.5 | C15—C14—C13 | 125.8 (5) |
C6—N1—C2 | 121.0 (4) | C14—C15—C16 | 118.3 (5) |
C6—N1—Ni1 | 120.6 (3) | C14—C15—H15 | 120.9 |
C2—N1—Ni1 | 118.4 (3) | C16—C15—H15 | 120.9 |
C11—N2—C7 | 116.5 (5) | C15—C16—C17 | 119.7 (5) |
C11—N2—Ni1 | 130.6 (3) | C15—C16—H16 | 120.1 |
C7—N2—Ni1 | 112.6 (3) | C17—C16—H16 | 120.1 |
C14—N3—C18 | 121.8 (4) | C18—C17—C16 | 118.6 (5) |
C14—N3—Ni1 | 118.1 (3) | C18—C17—H17 | 120.7 |
C18—N3—Ni1 | 119.9 (3) | C16—C17—H17 | 120.7 |
C23—N4—C19 | 115.6 (4) | N3—C18—C17 | 120.6 (5) |
C23—N4—Ni1 | 132.1 (3) | N3—C18—C19 | 114.9 (4) |
C19—N4—Ni1 | 111.9 (3) | C17—C18—C19 | 124.5 (5) |
O2—C1—O1 | 127.0 (5) | N4—C19—C20 | 123.8 (5) |
O2—C1—C2 | 118.6 (4) | N4—C19—C18 | 114.7 (4) |
O1—C1—C2 | 114.4 (5) | C20—C19—C18 | 121.5 (4) |
N1—C2—C3 | 122.0 (5) | C19—C20—C21 | 118.9 (5) |
N1—C2—C1 | 112.4 (4) | C19—C20—H20 | 120.6 |
C3—C2—C1 | 125.6 (5) | C21—C20—H20 | 120.6 |
C2—C3—C4 | 117.9 (5) | C22—C21—C20 | 119.0 (5) |
C2—C3—H3A | 121.1 | C22—C21—H21 | 120.5 |
C4—C3—H3A | 121.1 | C20—C21—H21 | 120.5 |
C5—C4—C3 | 119.8 (5) | C21—C22—C23 | 118.5 (5) |
C5—C4—H4 | 120.1 | C21—C22—H22 | 120.7 |
C3—C4—H4 | 120.1 | C23—C22—H22 | 120.7 |
C6—C5—C4 | 119.2 (5) | N4—C23—C22 | 124.1 (5) |
C6—C5—H5 | 120.4 | N4—C23—C24 | 118.6 (5) |
C4—C5—H5 | 120.4 | C22—C23—C24 | 117.2 (5) |
N1—C6—C5 | 120.0 (5) | O8—C24—O7 | 125.3 (5) |
N1—C6—C7 | 113.5 (4) | O8—C24—C23 | 122.1 (5) |
C5—C6—C7 | 126.5 (5) | O7—C24—C23 | 112.4 (4) |
N2—C7—C8 | 122.7 (4) | H9A—O9—H9B | 97.5 |
N2—C7—C6 | 115.1 (4) | H10A—O10—H10B | 97.1 |
C8—C7—C6 | 122.2 (4) | H11A—O11—H11B | 106.3 |
C9—C8—C7 | 119.4 (5) | H12A—O12—H12B | 102.5 |
C9—C8—H8 | 120.3 | ||
N1—Ni1—O1—C1 | −3.7 (4) | Ni1—N1—C6—C7 | 2.8 (6) |
N3—Ni1—O1—C1 | 177.7 (4) | C4—C5—C6—N1 | 2.4 (8) |
O5—Ni1—O1—C1 | −104.1 (4) | C4—C5—C6—C7 | −177.5 (5) |
N2—Ni1—O1—C1 | −13.6 (6) | C11—N2—C7—C8 | −2.2 (7) |
N4—Ni1—O1—C1 | 99.7 (4) | Ni1—N2—C7—C8 | −176.9 (4) |
N1—Ni1—O5—C13 | −173.4 (4) | C11—N2—C7—C6 | 177.3 (4) |
N3—Ni1—O5—C13 | −3.4 (4) | Ni1—N2—C7—C6 | 2.6 (5) |
O1—Ni1—O5—C13 | −94.6 (4) | N1—C6—C7—N2 | −3.5 (6) |
N2—Ni1—O5—C13 | 109.0 (4) | C5—C6—C7—N2 | 176.4 (5) |
N4—Ni1—O5—C13 | 2.8 (6) | N1—C6—C7—C8 | 176.0 (4) |
N3—Ni1—N1—C6 | −168.7 (8) | C5—C6—C7—C8 | −4.1 (8) |
O1—Ni1—N1—C6 | −177.2 (4) | N2—C7—C8—C9 | 1.3 (8) |
O5—Ni1—N1—C6 | −87.1 (4) | C6—C7—C8—C9 | −178.1 (5) |
N2—Ni1—N1—C6 | −1.2 (4) | C7—C8—C9—C10 | 0.2 (8) |
N4—Ni1—N1—C6 | 94.5 (4) | C8—C9—C10—C11 | −0.8 (8) |
N3—Ni1—N1—C2 | 13.4 (12) | C7—N2—C11—C10 | 1.5 (7) |
O1—Ni1—N1—C2 | 5.0 (4) | Ni1—N2—C11—C10 | 175.2 (4) |
O5—Ni1—N1—C2 | 95.1 (4) | C7—N2—C11—C12 | −177.0 (4) |
N2—Ni1—N1—C2 | −179.0 (4) | Ni1—N2—C11—C12 | −3.3 (7) |
N4—Ni1—N1—C2 | −83.3 (4) | C9—C10—C11—N2 | −0.1 (8) |
N1—Ni1—N2—C11 | −174.7 (5) | C9—C10—C11—C12 | 178.4 (5) |
N3—Ni1—N2—C11 | 3.0 (5) | N2—C11—C12—O4 | 117.9 (6) |
O1—Ni1—N2—C11 | −164.9 (4) | C10—C11—C12—O4 | −60.7 (8) |
O5—Ni1—N2—C11 | −73.5 (4) | N2—C11—C12—O3 | −64.1 (7) |
N4—Ni1—N2—C11 | 83.3 (4) | C10—C11—C12—O3 | 117.3 (6) |
N1—Ni1—N2—C7 | −0.9 (3) | Ni1—O5—C13—O6 | −174.0 (5) |
N3—Ni1—N2—C7 | 176.8 (3) | Ni1—O5—C13—C14 | 6.1 (6) |
O1—Ni1—N2—C7 | 9.0 (6) | C18—N3—C14—C15 | 0.1 (8) |
O5—Ni1—N2—C7 | 100.3 (3) | Ni1—N3—C14—C15 | −175.3 (4) |
N4—Ni1—N2—C7 | −102.9 (3) | C18—N3—C14—C13 | 178.8 (5) |
N1—Ni1—N3—C14 | 83.3 (10) | Ni1—N3—C14—C13 | 3.3 (6) |
O1—Ni1—N3—C14 | 91.6 (4) | O6—C13—C14—N3 | 173.7 (5) |
O5—Ni1—N3—C14 | −0.3 (4) | O5—C13—C14—N3 | −6.4 (7) |
N2—Ni1—N3—C14 | −83.6 (4) | O6—C13—C14—C15 | −7.7 (9) |
N4—Ni1—N3—C14 | −177.7 (4) | O5—C13—C14—C15 | 172.2 (5) |
N1—Ni1—N3—C18 | −92.2 (10) | N3—C14—C15—C16 | −0.3 (8) |
O1—Ni1—N3—C18 | −84.0 (4) | C13—C14—C15—C16 | −178.8 (5) |
O5—Ni1—N3—C18 | −175.9 (4) | C14—C15—C16—C17 | 0.1 (8) |
N2—Ni1—N3—C18 | 100.9 (4) | C15—C16—C17—C18 | 0.3 (8) |
N4—Ni1—N3—C18 | 6.7 (4) | C14—N3—C18—C17 | 0.3 (8) |
N1—Ni1—N4—C23 | −8.8 (5) | Ni1—N3—C18—C17 | 175.6 (4) |
N3—Ni1—N4—C23 | −178.8 (5) | C14—N3—C18—C19 | 178.7 (5) |
O1—Ni1—N4—C23 | −87.3 (5) | Ni1—N3—C18—C19 | −6.0 (6) |
O5—Ni1—N4—C23 | 175.0 (4) | C16—C17—C18—N3 | −0.4 (8) |
N2—Ni1—N4—C23 | 70.9 (5) | C16—C17—C18—C19 | −178.7 (5) |
N1—Ni1—N4—C19 | 163.7 (3) | C23—N4—C19—C20 | −0.9 (8) |
N3—Ni1—N4—C19 | −6.3 (3) | Ni1—N4—C19—C20 | −174.7 (4) |
O1—Ni1—N4—C19 | 85.2 (3) | C23—N4—C19—C18 | 179.0 (4) |
O5—Ni1—N4—C19 | −12.5 (6) | Ni1—N4—C19—C18 | 5.2 (5) |
N2—Ni1—N4—C19 | −116.7 (3) | N3—C18—C19—N4 | −0.1 (7) |
Ni1—O1—C1—O2 | −177.0 (5) | C17—C18—C19—N4 | 178.2 (5) |
Ni1—O1—C1—C2 | 1.9 (6) | N3—C18—C19—C20 | 179.8 (5) |
C6—N1—C2—C3 | −3.1 (8) | C17—C18—C19—C20 | −1.9 (8) |
Ni1—N1—C2—C3 | 174.7 (4) | N4—C19—C20—C21 | 1.5 (8) |
C6—N1—C2—C1 | 176.8 (4) | C18—C19—C20—C21 | −178.4 (5) |
Ni1—N1—C2—C1 | −5.4 (6) | C19—C20—C21—C22 | 0.2 (8) |
O2—C1—C2—N1 | −178.9 (5) | C20—C21—C22—C23 | −2.2 (8) |
O1—C1—C2—N1 | 2.1 (7) | C19—N4—C23—C22 | −1.3 (8) |
O2—C1—C2—C3 | 1.0 (8) | Ni1—N4—C23—C22 | 170.9 (4) |
O1—C1—C2—C3 | −178.1 (5) | C19—N4—C23—C24 | 175.3 (4) |
N1—C2—C3—C4 | 2.2 (8) | Ni1—N4—C23—C24 | −12.4 (7) |
C1—C2—C3—C4 | −177.7 (5) | C21—C22—C23—N4 | 2.9 (9) |
C2—C3—C4—C5 | 1.0 (8) | C21—C22—C23—C24 | −173.8 (5) |
C3—C4—C5—C6 | −3.2 (8) | N4—C23—C24—O8 | 114.4 (7) |
C2—N1—C6—C5 | 0.7 (7) | C22—C23—C24—O8 | −68.8 (8) |
Ni1—N1—C6—C5 | −177.1 (4) | N4—C23—C24—O7 | −70.5 (7) |
C2—N1—C6—C7 | −179.4 (4) | C22—C23—C24—O7 | 106.4 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12B···O6i | 0.83 | 2.02 | 2.783 (6) | 153 |
O12—H12A···O2 | 0.83 | 1.94 | 2.755 (5) | 165 |
O11—H11B···O12ii | 0.83 | 1.84 | 2.662 (5) | 172 |
O11—H11A···O9iii | 0.83 | 1.99 | 2.821 (6) | 177 |
O10—H10B···O5ii | 0.83 | 2.22 | 2.953 (5) | 148 |
O10—H10A···O2 | 0.83 | 2.05 | 2.822 (6) | 155 |
O9—H9B···O6iii | 0.83 | 1.89 | 2.694 (5) | 162 |
O9—H9A···O10iv | 0.83 | 1.90 | 2.714 (5) | 167 |
O7—H7···O11v | 0.84 | 1.69 | 2.513 (5) | 166 |
O3—H3···O9 | 0.84 | 1.79 | 2.614 (5) | 166 |
Symmetry codes: (i) x, y+1, z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y, −z+1; (iv) −x+1, −y+1, −z+1; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C12H7N2O4)2]·4H2O |
Mr | 617.17 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 113 |
a, b, c (Å) | 9.990 (2), 10.896 (2), 12.565 (3) |
α, β, γ (°) | 112.97 (3), 100.09 (3), 90.30 (3) |
V (Å3) | 1235.7 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.86 |
Crystal size (mm) | 0.20 × 0.10 × 0.08 |
Data collection | |
Diffractometer | Rigaku Saturn CCD area-detector diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2005) |
Tmin, Tmax | 0.846, 0.934 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7165, 4305, 2745 |
Rint | 0.126 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.068, 0.211, 1.05 |
No. of reflections | 4305 |
No. of parameters | 372 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.96, −0.75 |
Computer programs: CrystalClear (Rigaku/MSC , 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg & Putz, 2006) and Mercury (Macrae et al., 2006), publCIF (Westrip, 2009).
Ni1—N1 | 1.975 (4) | Ni1—O5 | 2.136 (4) |
Ni1—N3 | 1.987 (4) | Ni1—N2 | 2.161 (5) |
Ni1—O1 | 2.104 (4) | Ni1—N4 | 2.197 (4) |
N3—Ni1—N2 | 111.50 (16) | N3—Ni1—N4 | 78.03 (17) |
N1—Ni1—N4 | 103.32 (16) | O5—Ni1—N4 | 156.02 (15) |
N1—C6—C7—N2 | −3.5 (6) | N3—C18—C19—N4 | −0.1 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
O12—H12B···O6i | 0.83 | 2.02 | 2.783 (6) | 153.0 |
O12—H12A···O2 | 0.83 | 1.94 | 2.755 (5) | 165.4 |
O11—H11B···O12ii | 0.83 | 1.84 | 2.662 (5) | 172.0 |
O11—H11A···O9iii | 0.83 | 1.99 | 2.821 (6) | 176.6 |
O10—H10B···O5ii | 0.83 | 2.22 | 2.953 (5) | 147.6 |
O10—H10A···O2 | 0.83 | 2.05 | 2.822 (6) | 154.6 |
O9—H9B···O6iii | 0.83 | 1.89 | 2.694 (5) | 161.9 |
O9—H9A···O10iv | 0.83 | 1.90 | 2.714 (5) | 166.8 |
O7—H7···O11v | 0.84 | 1.69 | 2.513 (5) | 165.7 |
O3—H3···O9 | 0.84 | 1.79 | 2.614 (5) | 165.8 |
Symmetry codes: (i) x, y+1, z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y, −z+1; (iv) −x+1, −y+1, −z+1; (v) x, y, z−1. |
Acknowledgements
This work was supported by the Program for New Century Excellent Talents in Universities (NCET-04–0261) and the Scientific Research Foundation for Returned Overseas Chinese Scholars, State Education Ministry.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Pyridylcarboxylic acid is the 'ligand star' in coordination chemistry at all times (Gao et al., 2006). Many multidentate ligands containing N– or O–donors, such as pyridine-2,6-dicarboxylic acid (Liu et al., 2008), 2,2'-dipyridine-4,4'-dicarboxylic acid (Law et al., 2007), 2,2'-dipyridine-5,5'-dicarboxylic acid (Szeto et al., 2006) have been widely used because of their diverse coordination modes, which make the final architecture turn more stable and fascinating. Furthermore, they also offer more supramolecule contacts, such as hydrogen bonding or π···π stacking interactions, which further make the whole framework more stable (Robin & Fromm, 2006). However, a complex with the title ligand is still rare (Bünzli et al., 2000; Knight et al., 2006).
The molecule of the title complex (Fig. 1), shows that the Ni atom is located at the centre of a distorted octahedron of six coordinating atoms, four N atoms and two O atoms from the same two tridentating chelated 6-carboxy-2,2'-bipyridine-6'-carboxylate ligands L. The coordinated bipyridine fragments are nearly coplanar [torsion angles = 0.1 (7) and 3.5 (6)°, Table 1].
Three different hydrogen-bond ring patterns (see Table 2) are found in the structure: R53(10) (formed by O9-H9A..O10-H10A..O2..H12A-O12-H12B.. O6..H9B-); R65(14) (formed by O11-H11B..O12-H12A..O2..H10A-O10-H10B. .O5-C13-O6..H9B-O9..H11A-); and R55(12) (formed by O11-H11B..O12- H12B..O6-C13-O5..H10B-O10..H9A-O9..H11A-) (Bernstein et al., 1995). The intermolecular O—H···O hydrogen bonded cage-like units (assisted by the ligands L (Fig.2) and consisted of three different hydrogen-bond ring patterns), with four intermolecular hydrogen bonds, two O3—H3···O9 and two O7—H7···O11v (with H-bond patterns D, Bernstein et al., 1995), link eight adjacent NiII centers to form a three-dimensional framework (Fig.3). Face-to-face π-stacking interactions between inversion related pyridine rings with Cg5···Cg6vi and Cg7···Cg8iv distances of 3.548 (3) and 3.662 (3) Å (perpendicular distances between the respective rings are 3.314 and 3.438 Å) make the title compound more stable. Cg5, Cg6, Cg7, and Cg8 are the centroids of the pyridine rings (N1, C2 - C6), (N2, C7 - C11), (N3, C14 - C18) and (N4, C19 - C23), respectively. Symmetry codes: (vi) = -x, -y, -z, and (iv) = 1 - x, 1 - y, 1 - z, see Fig. 1.