organic compounds
2′-Amino-1′-(4-chlorophenyl)-1,7′,7′-trimethyl-2,5′-dioxo-5′,6′,7′,8′-tetrahydrospiro[indoline-3,4′(1′H)-quinoline]-3′-carbonitrile dimethylformamide solvate dihydrate
aDepartment of Chemistry, Xuzhou Medical College, Xuzhou 221002, People's Republic of China
*Correspondence e-mail: songleizhu@126.com
In the molecule of the title compound, C26H23ClN4O2·C3H7NO·2H2O, the indole and dihydropyridine rings are planar and make a dihedral angle of 89.86 (7)°. The dihydropyridine ring forms a dihedral angle of 79.95 (7)° with the attached benzene ring. In the intermolecular N—H⋯O and O—H⋯O hydrogen bonds link the molecules. Intermolecular C—H⋯N and C—H⋯Cl interactions are also present.
Related literature
For the indole nucleus, see: da Silva et al. (2001). For the antibacterial and fungicidal activities of indole compounds, see: Joshi & Chand (1982). For spirooxindole ring systems in see: Abdel-Rahman et al. (2004). For the preparation of involving indole derivatives, see: Zhu et al. (2007).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2001); cell CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809010551/bq2126sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809010551/bq2126Isup2.hkl
Compound (I) was prepared by one-pot reaction of 1-methylisatin (2 mmol), malononitrile (2 mmol) and 3-(4-chlorophenylamino) -5,5-dimethylcyclohex-2-enone (2 mmol) in ethanol. After stirring at 343 K for 5 h, the reaction mixture was cooled and washed with small amount of ethanol. The crude product was filtered and single crystals of the title compound were obtained from DMF and water mixture solution by slow evaporation at room temperature (yield; 80%, m.p. > 573 K). Spectroscopic analysis: IR (KBr, n, cm-1): 3463, 3312, 2190, 1716, 1650, 1568, 1491, 1364, 1090, 1018, 915, 753. 1H NMR (400 MHz, DMSO-d6): 7.65 (d, J = 8.4 Hz, 2H, Ar-H), 7.51-7.54 (m, 2H, ArH), 7.23 (t, J = 8.0 Hz, 2H, ArH), 6.93-6.70 (m, 2H, ArH), 5.55 (s, 2H, NH2), 3.13 (s, 3H, NCH3), 2.05-2.17 (m, 2H, CH2), 1.81-1.93 (m, 2H, CH2), 0.89 (s, 3H, CH3), 0.81 (s, 3H, CH3).
H atoms were positioned geometrically, with N-H=0.86Å (for NH) and C-H=0.93Å and 0.97Å for aromatic and methyl H and constrained to ride on their parent atoms with Uiso(H)=xUeq(C,N), where x=1.5 for methyl H and x=1.2 for all other H atoms.
Data collection: CrystalClear (Rigaku/MSC, 2001); cell
CrystalClear (Rigaku/MSC, 2001); data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEPII (Johnson, 1976); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. The solvent DMF and the two water molecules are not shown for clarity. | |
Fig. 2. A packing diagram of (I). Hydrogen bonds are shown as dashed lines. |
C26H23ClN4O2·C3H7NO·2(H2O) | Z = 2 |
Mr = 568.06 | F(000) = 600 |
Triclinic, P1 | Dx = 1.257 Mg m−3 |
Hall symbol: -P 1 | Melting point > 573 K |
a = 9.237 (1) Å | Mo Kα radiation, λ = 0.71070 Å |
b = 12.9553 (17) Å | Cell parameters from 5610 reflections |
c = 14.4554 (11) Å | θ = 3.0–25.3° |
α = 66.162 (11)° | µ = 0.17 mm−1 |
β = 71.619 (12)° | T = 293 K |
γ = 84.595 (15)° | Block, colorless |
V = 1500.5 (3) Å3 | 0.60 × 0.57 × 0.30 mm |
Rigaku Mercury diffractometer | 5445 independent reflections |
Radiation source: fine-focus sealed tube | 4310 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
Detector resolution: 7.31 pixels mm-1 | θmax = 25.4°, θmin = 3.0° |
ω scans | h = −10→11 |
Absorption correction: multi-scan (Jacobson, 1998) | k = −15→15 |
Tmin = 0.760, Tmax = 0.950 | l = −16→17 |
14714 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.066 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.155 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.13 | w = 1/[σ2(Fo2) + (0.0606P)2 + 0.5335P] where P = (Fo2 + 2Fc2)/3 |
5445 reflections | (Δ/σ)max = 0.001 |
379 parameters | Δρmax = 0.21 e Å−3 |
4 restraints | Δρmin = −0.31 e Å−3 |
C26H23ClN4O2·C3H7NO·2(H2O) | γ = 84.595 (15)° |
Mr = 568.06 | V = 1500.5 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.237 (1) Å | Mo Kα radiation |
b = 12.9553 (17) Å | µ = 0.17 mm−1 |
c = 14.4554 (11) Å | T = 293 K |
α = 66.162 (11)° | 0.60 × 0.57 × 0.30 mm |
β = 71.619 (12)° |
Rigaku Mercury diffractometer | 5445 independent reflections |
Absorption correction: multi-scan (Jacobson, 1998) | 4310 reflections with I > 2σ(I) |
Tmin = 0.760, Tmax = 0.950 | Rint = 0.028 |
14714 measured reflections |
R[F2 > 2σ(F2)] = 0.066 | 4 restraints |
wR(F2) = 0.155 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.13 | Δρmax = 0.21 e Å−3 |
5445 reflections | Δρmin = −0.31 e Å−3 |
379 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.98120 (12) | 1.26623 (8) | −0.42483 (7) | 0.1045 (4) | |
O1 | 0.7477 (2) | 0.47841 (13) | 0.12855 (14) | 0.0562 (5) | |
O2 | 0.9204 (2) | 0.60921 (17) | 0.22240 (15) | 0.0609 (5) | |
O3 | 0.5785 (4) | 0.07513 (19) | 0.2612 (2) | 0.1004 (9) | |
O4 | 0.1363 (4) | 0.7917 (2) | 0.0471 (2) | 0.0956 (8) | |
H4A | 0.148 (5) | 0.772 (4) | −0.002 (2) | 0.115* | |
H4B | 0.076 (4) | 0.747 (3) | 0.101 (2) | 0.115* | |
O5 | 0.7925 (3) | 0.2586 (2) | 0.1329 (2) | 0.0918 (8) | |
H5A | 0.781 (5) | 0.317 (2) | 0.144 (3) | 0.110* | |
H5B | 0.721 (3) | 0.214 (3) | 0.176 (3) | 0.110* | |
N1 | 0.7639 (2) | 0.87742 (14) | −0.01571 (14) | 0.0364 (4) | |
N2 | 0.6913 (3) | 0.51570 (16) | 0.33166 (15) | 0.0490 (5) | |
N3 | 0.5786 (3) | 0.79554 (19) | 0.35627 (18) | 0.0595 (6) | |
N4 | 0.7018 (2) | 0.98819 (15) | 0.08330 (15) | 0.0436 (5) | |
H4C | 0.6681 | 0.9967 | 0.1424 | 0.052* | |
H4D | 0.7271 | 1.0464 | 0.0242 | 0.052* | |
N5 | 0.3930 (5) | 0.0797 (3) | 0.4056 (3) | 0.1189 (14) | |
C1 | 0.7780 (2) | 0.77324 (18) | −0.02435 (17) | 0.0351 (5) | |
C2 | 0.7457 (2) | 0.67493 (18) | 0.06225 (17) | 0.0357 (5) | |
C3 | 0.6836 (2) | 0.66875 (18) | 0.17425 (17) | 0.0361 (5) | |
C4 | 0.6775 (2) | 0.78666 (18) | 0.17317 (17) | 0.0348 (5) | |
C5 | 0.7150 (2) | 0.88302 (17) | 0.08337 (17) | 0.0336 (5) | |
C6 | 0.7733 (3) | 0.5680 (2) | 0.04972 (19) | 0.0422 (6) | |
C7 | 0.8399 (3) | 0.5698 (2) | −0.0597 (2) | 0.0521 (7) | |
H7A | 0.8078 | 0.5007 | −0.0600 | 0.063* | |
H7B | 0.9504 | 0.5711 | −0.0777 | 0.063* | |
C8 | 0.7935 (3) | 0.6698 (2) | −0.1438 (2) | 0.0499 (6) | |
C9 | 0.8308 (3) | 0.7769 (2) | −0.13491 (18) | 0.0457 (6) | |
H9A | 0.9405 | 0.7912 | −0.1630 | 0.055* | |
H9B | 0.7845 | 0.8399 | −0.1790 | 0.055* | |
C10 | 0.6231 (4) | 0.6592 (3) | −0.1279 (3) | 0.0723 (9) | |
H10A | 0.6032 | 0.5937 | −0.1380 | 0.108* | |
H10B | 0.5932 | 0.7254 | −0.1785 | 0.108* | |
H10C | 0.5659 | 0.6519 | −0.0573 | 0.108* | |
C11 | 0.8872 (4) | 0.6759 (3) | −0.2544 (2) | 0.0767 (10) | |
H11A | 0.9938 | 0.6831 | −0.2636 | 0.115* | |
H11B | 0.8585 | 0.7402 | −0.3074 | 0.115* | |
H11C | 0.8678 | 0.6083 | −0.2614 | 0.115* | |
C12 | 0.7833 (3) | 0.5956 (2) | 0.24294 (19) | 0.0439 (6) | |
C13 | 0.5405 (3) | 0.52001 (19) | 0.32746 (19) | 0.0457 (6) | |
C14 | 0.4138 (4) | 0.4527 (2) | 0.4012 (2) | 0.0673 (9) | |
H14 | 0.4199 | 0.3940 | 0.4636 | 0.081* | |
C15 | 0.2771 (4) | 0.4775 (3) | 0.3771 (3) | 0.0768 (10) | |
H15 | 0.1900 | 0.4339 | 0.4250 | 0.092* | |
C16 | 0.2652 (3) | 0.5628 (3) | 0.2865 (3) | 0.0700 (9) | |
H16 | 0.1714 | 0.5767 | 0.2735 | 0.084* | |
C17 | 0.3932 (3) | 0.6290 (2) | 0.2137 (2) | 0.0506 (6) | |
H17 | 0.3866 | 0.6874 | 0.1512 | 0.061* | |
C18 | 0.5295 (3) | 0.60722 (18) | 0.23519 (18) | 0.0387 (5) | |
C19 | 0.7487 (4) | 0.4264 (3) | 0.4093 (2) | 0.0743 (9) | |
H19A | 0.7541 | 0.3587 | 0.3967 | 0.111* | |
H19B | 0.6814 | 0.4131 | 0.4792 | 0.111* | |
H19C | 0.8487 | 0.4482 | 0.4035 | 0.111* | |
C20 | 0.6241 (3) | 0.79382 (19) | 0.27326 (19) | 0.0413 (6) | |
C21 | 0.8148 (2) | 0.97855 (18) | −0.11100 (17) | 0.0350 (5) | |
C22 | 0.7118 (3) | 1.04436 (19) | −0.15805 (19) | 0.0432 (6) | |
H22 | 0.6077 | 1.0277 | −0.1254 | 0.052* | |
C23 | 0.7629 (3) | 1.1353 (2) | −0.2540 (2) | 0.0523 (7) | |
H23 | 0.6939 | 1.1808 | −0.2863 | 0.063* | |
C24 | 0.9163 (3) | 1.1575 (2) | −0.3009 (2) | 0.0554 (7) | |
C25 | 1.0204 (3) | 1.0947 (2) | −0.2537 (2) | 0.0598 (7) | |
H25 | 1.1243 | 1.1127 | −0.2860 | 0.072* | |
C26 | 0.9691 (3) | 1.0041 (2) | −0.1572 (2) | 0.0492 (6) | |
H26 | 1.0382 | 0.9607 | −0.1237 | 0.059* | |
C27 | 0.4592 (6) | 0.0402 (3) | 0.3331 (3) | 0.0904 (12) | |
H27 | 0.4101 | −0.0214 | 0.3366 | 0.108* | |
C28 | 0.4561 (9) | 0.1747 (5) | 0.4057 (5) | 0.187 (3) | |
H28A | 0.5649 | 0.1780 | 0.3746 | 0.280* | |
H28B | 0.4322 | 0.1686 | 0.4774 | 0.280* | |
H28C | 0.4141 | 0.2420 | 0.3652 | 0.280* | |
C29 | 0.2537 (8) | 0.0312 (7) | 0.4884 (5) | 0.205 (4) | |
H29A | 0.2198 | −0.0318 | 0.4806 | 0.307* | |
H29B | 0.1771 | 0.0869 | 0.4839 | 0.307* | |
H29C | 0.2710 | 0.0060 | 0.5562 | 0.307* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.1137 (8) | 0.0718 (6) | 0.0595 (5) | −0.0027 (5) | 0.0020 (5) | 0.0216 (4) |
O1 | 0.0800 (13) | 0.0305 (9) | 0.0487 (11) | 0.0064 (8) | −0.0133 (9) | −0.0120 (8) |
O2 | 0.0489 (11) | 0.0686 (13) | 0.0630 (12) | 0.0095 (9) | −0.0250 (9) | −0.0194 (10) |
O3 | 0.158 (3) | 0.0573 (14) | 0.0778 (18) | −0.0061 (15) | −0.0191 (18) | −0.0296 (13) |
O4 | 0.133 (2) | 0.0648 (15) | 0.0736 (18) | −0.0345 (14) | −0.0062 (16) | −0.0228 (13) |
O5 | 0.0887 (18) | 0.0642 (16) | 0.126 (2) | 0.0034 (13) | −0.0146 (15) | −0.0546 (16) |
N1 | 0.0479 (11) | 0.0275 (10) | 0.0295 (10) | −0.0011 (8) | −0.0091 (8) | −0.0086 (8) |
N2 | 0.0682 (14) | 0.0371 (11) | 0.0335 (11) | 0.0104 (10) | −0.0172 (10) | −0.0063 (9) |
N3 | 0.0835 (17) | 0.0514 (14) | 0.0413 (13) | 0.0010 (11) | −0.0124 (12) | −0.0209 (11) |
N4 | 0.0590 (13) | 0.0328 (10) | 0.0358 (11) | −0.0035 (9) | −0.0092 (9) | −0.0131 (9) |
N5 | 0.197 (4) | 0.101 (3) | 0.075 (2) | 0.080 (3) | −0.058 (3) | −0.055 (2) |
C1 | 0.0369 (12) | 0.0329 (12) | 0.0343 (12) | 0.0008 (9) | −0.0100 (10) | −0.0128 (10) |
C2 | 0.0401 (12) | 0.0329 (12) | 0.0333 (12) | 0.0023 (9) | −0.0107 (10) | −0.0127 (10) |
C3 | 0.0401 (12) | 0.0314 (12) | 0.0331 (12) | −0.0001 (9) | −0.0092 (10) | −0.0104 (10) |
C4 | 0.0401 (12) | 0.0315 (12) | 0.0311 (12) | −0.0018 (9) | −0.0082 (9) | −0.0121 (10) |
C5 | 0.0344 (12) | 0.0301 (11) | 0.0365 (12) | −0.0005 (9) | −0.0108 (9) | −0.0129 (10) |
C6 | 0.0507 (14) | 0.0343 (13) | 0.0415 (14) | 0.0059 (10) | −0.0147 (11) | −0.0153 (11) |
C7 | 0.0681 (17) | 0.0425 (14) | 0.0511 (16) | 0.0109 (12) | −0.0194 (13) | −0.0248 (12) |
C8 | 0.0699 (18) | 0.0439 (14) | 0.0421 (14) | 0.0063 (12) | −0.0200 (13) | −0.0217 (12) |
C9 | 0.0588 (15) | 0.0411 (14) | 0.0347 (13) | 0.0019 (11) | −0.0113 (11) | −0.0147 (11) |
C10 | 0.081 (2) | 0.070 (2) | 0.080 (2) | 0.0025 (16) | −0.0420 (18) | −0.0305 (17) |
C11 | 0.125 (3) | 0.0619 (19) | 0.0506 (18) | 0.0082 (18) | −0.0236 (18) | −0.0325 (16) |
C12 | 0.0545 (16) | 0.0385 (13) | 0.0375 (13) | 0.0091 (11) | −0.0159 (11) | −0.0141 (11) |
C13 | 0.0562 (16) | 0.0327 (13) | 0.0417 (14) | −0.0007 (11) | −0.0042 (12) | −0.0159 (11) |
C14 | 0.094 (2) | 0.0401 (15) | 0.0464 (17) | −0.0152 (15) | 0.0039 (16) | −0.0107 (13) |
C15 | 0.062 (2) | 0.069 (2) | 0.085 (2) | −0.0284 (17) | 0.0098 (18) | −0.034 (2) |
C16 | 0.0542 (18) | 0.068 (2) | 0.092 (3) | −0.0113 (15) | −0.0084 (16) | −0.043 (2) |
C17 | 0.0484 (15) | 0.0431 (14) | 0.0641 (17) | 0.0001 (11) | −0.0155 (13) | −0.0258 (13) |
C18 | 0.0437 (13) | 0.0307 (12) | 0.0382 (13) | −0.0026 (10) | −0.0060 (10) | −0.0143 (10) |
C19 | 0.109 (3) | 0.0574 (18) | 0.0457 (17) | 0.0280 (17) | −0.0305 (17) | −0.0095 (14) |
C20 | 0.0504 (14) | 0.0316 (12) | 0.0392 (14) | −0.0024 (10) | −0.0120 (11) | −0.0116 (10) |
C21 | 0.0405 (13) | 0.0309 (11) | 0.0293 (11) | −0.0043 (9) | −0.0080 (10) | −0.0084 (9) |
C22 | 0.0387 (13) | 0.0386 (13) | 0.0454 (14) | 0.0048 (10) | −0.0097 (11) | −0.0130 (11) |
C23 | 0.0582 (17) | 0.0428 (14) | 0.0461 (15) | 0.0105 (12) | −0.0186 (13) | −0.0079 (12) |
C24 | 0.0668 (18) | 0.0381 (14) | 0.0413 (15) | −0.0031 (12) | −0.0086 (13) | −0.0008 (11) |
C25 | 0.0456 (15) | 0.0581 (17) | 0.0542 (17) | −0.0143 (13) | −0.0035 (13) | −0.0062 (14) |
C26 | 0.0444 (14) | 0.0496 (15) | 0.0467 (15) | −0.0026 (11) | −0.0168 (12) | −0.0091 (12) |
C27 | 0.144 (4) | 0.067 (2) | 0.070 (2) | 0.030 (2) | −0.039 (2) | −0.038 (2) |
C28 | 0.386 (11) | 0.122 (4) | 0.147 (5) | 0.106 (6) | −0.168 (6) | −0.102 (4) |
C29 | 0.208 (7) | 0.245 (8) | 0.109 (4) | 0.123 (6) | −0.015 (5) | −0.068 (5) |
Cl1—C24 | 1.730 (3) | C9—H9B | 0.9700 |
O1—C6 | 1.230 (3) | C10—H10A | 0.9600 |
O2—C12 | 1.219 (3) | C10—H10B | 0.9600 |
O3—C27 | 1.221 (5) | C10—H10C | 0.9600 |
O4—H4A | 0.82 (4) | C11—H11A | 0.9600 |
O4—H4B | 0.82 (3) | C11—H11B | 0.9600 |
O5—H5A | 0.83 (3) | C11—H11C | 0.9600 |
O5—H5B | 0.82 (4) | C13—C18 | 1.383 (3) |
N1—C5 | 1.389 (3) | C13—C14 | 1.386 (4) |
N1—C1 | 1.395 (3) | C14—C15 | 1.389 (5) |
N1—C21 | 1.444 (3) | C14—H14 | 0.9300 |
N2—C12 | 1.357 (3) | C15—C16 | 1.358 (5) |
N2—C13 | 1.408 (3) | C15—H15 | 0.9300 |
N2—C19 | 1.445 (3) | C16—C17 | 1.385 (4) |
N3—C20 | 1.148 (3) | C16—H16 | 0.9300 |
N4—C5 | 1.356 (3) | C17—C18 | 1.368 (3) |
N4—H4C | 0.8600 | C17—H17 | 0.9300 |
N4—H4D | 0.8600 | C19—H19A | 0.9600 |
N5—C27 | 1.306 (4) | C19—H19B | 0.9600 |
N5—C28 | 1.410 (7) | C19—H19C | 0.9600 |
N5—C29 | 1.434 (7) | C21—C22 | 1.372 (3) |
C1—C2 | 1.351 (3) | C21—C26 | 1.377 (3) |
C1—C9 | 1.499 (3) | C22—C23 | 1.381 (3) |
C2—C6 | 1.458 (3) | C22—H22 | 0.9300 |
C2—C3 | 1.508 (3) | C23—C24 | 1.365 (4) |
C3—C18 | 1.514 (3) | C23—H23 | 0.9300 |
C3—C4 | 1.517 (3) | C24—C25 | 1.367 (4) |
C3—C12 | 1.544 (3) | C25—C26 | 1.384 (4) |
C4—C5 | 1.361 (3) | C25—H25 | 0.9300 |
C4—C20 | 1.412 (3) | C26—H26 | 0.9300 |
C6—C7 | 1.497 (3) | C27—H27 | 0.9300 |
C7—C8 | 1.514 (4) | C28—H28A | 0.9600 |
C7—H7A | 0.9700 | C28—H28B | 0.9600 |
C7—H7B | 0.9700 | C28—H28C | 0.9600 |
C8—C9 | 1.524 (3) | C29—H29A | 0.9600 |
C8—C10 | 1.528 (4) | C29—H29B | 0.9600 |
C8—C11 | 1.533 (4) | C29—H29C | 0.9600 |
C9—H9A | 0.9700 | ||
H4A—O4—H4B | 110 (4) | H11A—C11—H11C | 109.5 |
H5A—O5—H5B | 108 (4) | H11B—C11—H11C | 109.5 |
C5—N1—C1 | 120.56 (17) | O2—C12—N2 | 125.9 (2) |
C5—N1—C21 | 120.44 (17) | O2—C12—C3 | 125.8 (2) |
C1—N1—C21 | 118.74 (18) | N2—C12—C3 | 108.3 (2) |
C12—N2—C13 | 111.0 (2) | C18—C13—C14 | 121.1 (3) |
C12—N2—C19 | 123.1 (2) | C18—C13—N2 | 110.0 (2) |
C13—N2—C19 | 125.0 (2) | C14—C13—N2 | 128.9 (3) |
C5—N4—H4C | 120.0 | C13—C14—C15 | 116.5 (3) |
C5—N4—H4D | 120.0 | C13—C14—H14 | 121.7 |
H4C—N4—H4D | 120.0 | C15—C14—H14 | 121.7 |
C27—N5—C28 | 120.9 (5) | C16—C15—C14 | 122.9 (3) |
C27—N5—C29 | 123.0 (5) | C16—C15—H15 | 118.6 |
C28—N5—C29 | 116.1 (5) | C14—C15—H15 | 118.6 |
C2—C1—N1 | 121.7 (2) | C15—C16—C17 | 119.8 (3) |
C2—C1—C9 | 122.1 (2) | C15—C16—H16 | 120.1 |
N1—C1—C9 | 116.17 (19) | C17—C16—H16 | 120.1 |
C1—C2—C6 | 119.9 (2) | C18—C17—C16 | 118.9 (3) |
C1—C2—C3 | 123.27 (19) | C18—C17—H17 | 120.6 |
C6—C2—C3 | 116.87 (19) | C16—C17—H17 | 120.6 |
C2—C3—C18 | 113.90 (18) | C17—C18—C13 | 120.9 (2) |
C2—C3—C4 | 109.84 (17) | C17—C18—C3 | 130.3 (2) |
C18—C3—C4 | 110.71 (17) | C13—C18—C3 | 108.7 (2) |
C2—C3—C12 | 111.04 (18) | N2—C19—H19A | 109.5 |
C18—C3—C12 | 101.58 (18) | N2—C19—H19B | 109.5 |
C4—C3—C12 | 109.47 (18) | H19A—C19—H19B | 109.5 |
C5—C4—C20 | 119.5 (2) | N2—C19—H19C | 109.5 |
C5—C4—C3 | 124.29 (19) | H19A—C19—H19C | 109.5 |
C20—C4—C3 | 116.16 (18) | H19B—C19—H19C | 109.5 |
N4—C5—C4 | 123.7 (2) | N3—C20—C4 | 177.4 (2) |
N4—C5—N1 | 116.05 (19) | C22—C21—C26 | 120.6 (2) |
C4—C5—N1 | 120.16 (19) | C22—C21—N1 | 120.5 (2) |
O1—C6—C2 | 120.0 (2) | C26—C21—N1 | 118.8 (2) |
O1—C6—C7 | 121.1 (2) | C21—C22—C23 | 119.9 (2) |
C2—C6—C7 | 118.9 (2) | C21—C22—H22 | 120.1 |
C6—C7—C8 | 113.4 (2) | C23—C22—H22 | 120.1 |
C6—C7—H7A | 108.9 | C24—C23—C22 | 119.0 (2) |
C8—C7—H7A | 108.9 | C24—C23—H23 | 120.5 |
C6—C7—H7B | 108.9 | C22—C23—H23 | 120.5 |
C8—C7—H7B | 108.9 | C23—C24—C25 | 121.9 (2) |
H7A—C7—H7B | 107.7 | C23—C24—Cl1 | 119.1 (2) |
C7—C8—C9 | 108.1 (2) | C25—C24—Cl1 | 119.0 (2) |
C7—C8—C10 | 110.0 (2) | C24—C25—C26 | 119.1 (2) |
C9—C8—C10 | 110.9 (2) | C24—C25—H25 | 120.5 |
C7—C8—C11 | 109.8 (2) | C26—C25—H25 | 120.5 |
C9—C8—C11 | 107.8 (2) | C21—C26—C25 | 119.5 (2) |
C10—C8—C11 | 110.2 (2) | C21—C26—H26 | 120.3 |
C1—C9—C8 | 114.7 (2) | C25—C26—H26 | 120.3 |
C1—C9—H9A | 108.6 | O3—C27—N5 | 127.2 (4) |
C8—C9—H9A | 108.6 | O3—C27—H27 | 116.4 |
C1—C9—H9B | 108.6 | N5—C27—H27 | 116.4 |
C8—C9—H9B | 108.6 | N5—C28—H28A | 109.5 |
H9A—C9—H9B | 107.6 | N5—C28—H28B | 109.5 |
C8—C10—H10A | 109.5 | H28A—C28—H28B | 109.5 |
C8—C10—H10B | 109.5 | N5—C28—H28C | 109.5 |
H10A—C10—H10B | 109.5 | H28A—C28—H28C | 109.5 |
C8—C10—H10C | 109.5 | H28B—C28—H28C | 109.5 |
H10A—C10—H10C | 109.5 | N5—C29—H29A | 109.5 |
H10B—C10—H10C | 109.5 | N5—C29—H29B | 109.5 |
C8—C11—H11A | 109.5 | H29A—C29—H29B | 109.5 |
C8—C11—H11B | 109.5 | N5—C29—H29C | 109.5 |
H11A—C11—H11B | 109.5 | H29A—C29—H29C | 109.5 |
C8—C11—H11C | 109.5 | H29B—C29—H29C | 109.5 |
C5—N1—C1—C2 | −0.3 (3) | C2—C3—C12—O2 | 54.8 (3) |
C21—N1—C1—C2 | 173.8 (2) | C18—C3—C12—O2 | 176.3 (2) |
C5—N1—C1—C9 | 179.7 (2) | C4—C3—C12—O2 | −66.6 (3) |
C21—N1—C1—C9 | −6.2 (3) | C2—C3—C12—N2 | −127.1 (2) |
N1—C1—C2—C6 | −175.3 (2) | C18—C3—C12—N2 | −5.6 (2) |
C9—C1—C2—C6 | 4.8 (3) | C4—C3—C12—N2 | 111.5 (2) |
N1—C1—C2—C3 | 3.7 (3) | C12—N2—C13—C18 | −1.9 (3) |
C9—C1—C2—C3 | −176.2 (2) | C19—N2—C13—C18 | −171.3 (2) |
C1—C2—C3—C18 | 119.9 (2) | C12—N2—C13—C14 | 179.3 (2) |
C6—C2—C3—C18 | −61.1 (3) | C19—N2—C13—C14 | 10.0 (4) |
C1—C2—C3—C4 | −4.9 (3) | C18—C13—C14—C15 | 0.2 (4) |
C6—C2—C3—C4 | 174.08 (19) | N2—C13—C14—C15 | 178.8 (3) |
C1—C2—C3—C12 | −126.2 (2) | C13—C14—C15—C16 | 0.0 (5) |
C6—C2—C3—C12 | 52.9 (3) | C14—C15—C16—C17 | 0.2 (5) |
C2—C3—C4—C5 | 3.4 (3) | C15—C16—C17—C18 | −0.4 (4) |
C18—C3—C4—C5 | −123.3 (2) | C16—C17—C18—C13 | 0.6 (4) |
C12—C3—C4—C5 | 125.6 (2) | C16—C17—C18—C3 | −176.1 (2) |
C2—C3—C4—C20 | −178.80 (19) | C14—C13—C18—C17 | −0.5 (4) |
C18—C3—C4—C20 | 54.6 (3) | N2—C13—C18—C17 | −179.3 (2) |
C12—C3—C4—C20 | −56.6 (3) | C14—C13—C18—C3 | 176.9 (2) |
C20—C4—C5—N4 | −1.2 (3) | N2—C13—C18—C3 | −2.0 (3) |
C3—C4—C5—N4 | 176.5 (2) | C2—C3—C18—C17 | −59.0 (3) |
C20—C4—C5—N1 | −178.3 (2) | C4—C3—C18—C17 | 65.4 (3) |
C3—C4—C5—N1 | −0.6 (3) | C12—C3—C18—C17 | −178.5 (2) |
C1—N1—C5—N4 | −178.59 (19) | C2—C3—C18—C13 | 123.9 (2) |
C21—N1—C5—N4 | 7.4 (3) | C4—C3—C18—C13 | −111.7 (2) |
C1—N1—C5—C4 | −1.3 (3) | C12—C3—C18—C13 | 4.5 (2) |
C21—N1—C5—C4 | −175.3 (2) | C5—C4—C20—N3 | 163 (6) |
C1—C2—C6—O1 | 178.2 (2) | C3—C4—C20—N3 | −15 (6) |
C3—C2—C6—O1 | −0.9 (3) | C5—N1—C21—C22 | −85.8 (3) |
C1—C2—C6—C7 | 1.1 (3) | C1—N1—C21—C22 | 100.1 (3) |
C3—C2—C6—C7 | −178.0 (2) | C5—N1—C21—C26 | 98.0 (3) |
O1—C6—C7—C8 | 151.3 (2) | C1—N1—C21—C26 | −76.1 (3) |
C2—C6—C7—C8 | −31.7 (3) | C26—C21—C22—C23 | 1.8 (4) |
C6—C7—C8—C9 | 53.2 (3) | N1—C21—C22—C23 | −174.4 (2) |
C6—C7—C8—C10 | −68.0 (3) | C21—C22—C23—C24 | 0.5 (4) |
C6—C7—C8—C11 | 170.5 (2) | C22—C23—C24—C25 | −2.4 (4) |
C2—C1—C9—C8 | 20.2 (3) | C22—C23—C24—Cl1 | 176.2 (2) |
N1—C1—C9—C8 | −159.8 (2) | C23—C24—C25—C26 | 1.9 (4) |
C7—C8—C9—C1 | −47.8 (3) | Cl1—C24—C25—C26 | −176.6 (2) |
C10—C8—C9—C1 | 72.9 (3) | C22—C21—C26—C25 | −2.2 (4) |
C11—C8—C9—C1 | −166.4 (2) | N1—C21—C26—C25 | 174.0 (2) |
C13—N2—C12—O2 | −177.0 (2) | C24—C25—C26—C21 | 0.4 (4) |
C19—N2—C12—O2 | −7.5 (4) | C28—N5—C27—O3 | 1.6 (7) |
C13—N2—C12—C3 | 4.9 (3) | C29—N5—C27—O3 | −178.8 (5) |
C19—N2—C12—C3 | 174.4 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
C28—H28B···N3i | 0.96 | 2.60 | 3.528 (5) | 163 |
C15—H15···Cl1ii | 0.93 | 2.74 | 3.647 (3) | 167 |
N4—H4D···O4iii | 0.86 | 2.23 | 2.934 (3) | 139 |
N4—H4C···O3iv | 0.86 | 2.24 | 3.071 (3) | 162 |
O5—H5B···O3 | 0.82 (4) | 2.03 (4) | 2.830 (4) | 163 (4) |
O5—H5A···O1 | 0.83 (3) | 2.02 (2) | 2.816 (3) | 164 (4) |
O4—H4B···O2v | 0.82 (3) | 2.17 (3) | 2.974 (3) | 167 (4) |
O4—H4A···O5vi | 0.82 (4) | 1.99 (4) | 2.800 (4) | 170 (4) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y−1, z+1; (iii) −x+1, −y+2, −z; (iv) x, y+1, z; (v) x−1, y, z; (vi) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C26H23ClN4O2·C3H7NO·2(H2O) |
Mr | 568.06 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 9.237 (1), 12.9553 (17), 14.4554 (11) |
α, β, γ (°) | 66.162 (11), 71.619 (12), 84.595 (15) |
V (Å3) | 1500.5 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.17 |
Crystal size (mm) | 0.60 × 0.57 × 0.30 |
Data collection | |
Diffractometer | Rigaku Mercury diffractometer |
Absorption correction | Multi-scan (Jacobson, 1998) |
Tmin, Tmax | 0.760, 0.950 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14714, 5445, 4310 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.602 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.066, 0.155, 1.13 |
No. of reflections | 5445 |
No. of parameters | 379 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.21, −0.31 |
Computer programs: CrystalClear (Rigaku/MSC, 2001), CrystalStructure (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEPII (Johnson, 1976).
D—H···A | D—H | H···A | D···A | D—H···A |
C28—H28B···N3i | 0.96 | 2.60 | 3.528 (5) | 163.1 |
C15—H15···Cl1ii | 0.93 | 2.74 | 3.647 (3) | 166.6 |
N4—H4D···O4iii | 0.86 | 2.23 | 2.934 (3) | 138.6 |
N4—H4C···O3iv | 0.86 | 2.24 | 3.071 (3) | 162.0 |
O5—H5B···O3 | 0.82 (4) | 2.03 (4) | 2.830 (4) | 163 (4) |
O5—H5A···O1 | 0.83 (3) | 2.017 (16) | 2.816 (3) | 164 (4) |
O4—H4B···O2v | 0.82 (3) | 2.17 (3) | 2.974 (3) | 167 (4) |
O4—H4A···O5vi | 0.82 (4) | 1.99 (4) | 2.800 (4) | 170 (4) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y−1, z+1; (iii) −x+1, −y+2, −z; (iv) x, y+1, z; (v) x−1, y, z; (vi) −x+1, −y+1, −z. |
Acknowledgements
The authors are deeply indebted to Professor S. J. Ji for his invaluable help. This work was partially supported by the Special Foundation of the President of Xuzhou Medical College and by a grant from the Chemistry and Biochemistry Experimental Center of Xuzhou Medical College.
References
Abdel-Rahman, A. H., Keshk, E. M., Hanna, M. A. & El-Bady, Sh. M. (2004). Bioorg. Med. Chem. 12, 2483–2488. Web of Science CrossRef PubMed CAS Google Scholar
Jacobson, R. (1998). Private communication to the Rigaku Corporation, Tokyo, Japan. Google Scholar
Johnson, C. K. (1976). ORTEPII. Report ORNL-5138. Oak Ridge National Laboratory, Tennessee, USA. Google Scholar
Joshi, K. C. & Chand, P. (1982). Pharmazie, 37, 1–12. CAS PubMed Web of Science Google Scholar
Rigaku/MSC (2001). CrystalClear. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Rigaku/MSC (2004). CrystalStructure. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Silva, J. F. M. da, Garden, S. J. & Pinto, A. C. (2001). J. Braz. Chem. Soc. 12, 273–324. CrossRef Google Scholar
Zhu, S. L., Ji, S. J. & Zhang, Y. (2007). Tetrahedron, 63, 9365–9372. Web of Science CSD CrossRef CAS Google Scholar
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The indole nucleus is the well known heterocyclic compound (da Silva et al., 2001). Compounds carrying the indole moiety exhibit antibacterial and fungicidal activities (Joshi & Chand, 1982). Spirooxindole ring systems are found in a number of alkaloids like horsifiline, spirotryprostatin and elacomine (Abdel-Rahman et al., 2004). As a part of our program devoted to the preparation of heterocyclic compounds involving indole derivatives (Zhu et al., 2007), we have synthesized a series of spirooxindoles via reactions of substituted isatins together with malononitrile and enaminones. We report herein the crystal structure of the title compound, (I).
In the molecule of (I), (Fig. 1), the indole ring A (C3/C12/N2/C13-C18) and the dihydropyridine ring B (N1/C1-C5), are planar. The dihedral angle between them is 89.86 (7)°, and the benzene ring C (C21-C26) is oriented at a dihedral angle of 79.95 (7)° with the attached ring B. Ring D (C1/C2/C6-C9) adopts twisted conformation, with C8 deviating the C1/C2/C6/C7 plan by 0.636 (3)Å.
In the crystal structure, intermolecular N-H···O and O-H···O, hydrogen bonds link the molecules (Fig. 2), in which they may be effective in the stabilization of the structure.