Issue contents
Download PDF of article
Download CIF
3D view
Navigation
Highlighting
Dictionary of Crystallography reference
IUPAC Gold Book reference
more ...
Download citation
FormatBIBTeX
EndNote
RefMan
Refer
Medline
CIF
SGML
Plain Text
share
Previous article
Next article
Previous article
Issue contents
Download PDF of article
Download CIF
3D view
Navigation
Highlighting
Dictionary of Crystallography reference
IUPAC Gold Book reference
more ...
Download citation
FormatBIBTeX
EndNote
RefMan
Refer
Medline
CIF
SGML
Plain Text
share
Next article

organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 65| Part 4| April 2009| Pages o699-o700
doi:10.1107/S160053680900765X

1-(1H-Benzimidazol-1-ylmeth­yl)-3-[2-(di­iso­propyl­amino)eth­yl]-1H-benzimid­azolium bromide 0.25-hydrate

Hakan Arslan,a,b* Don VanDerveer,c Serpil Demir,d İsmail Özdemird and Bekir Çetinkayae

aDepartment of Natural Sciences, Fayetteville State University, Fayetteville, NC 28301, USA, bDepartment of Chemistry, Faculty of Pharmacy, Mersin University, Mersin TR 33169, Turkey, cDepartment of Chemistry, Clemson University, Clemson, SC 29634, USA, dDepartment of Chemistry, Faculty of Science and Arts, nönü University, Malatya TR 44280, Turkey, and eDepartment of Chemistry, Faculty of Science, Ege University, Bornova-zmir TR 35100, Turkey
*Correspondence e-mail: hakan.arslan.acad@gmail.com

(Received 1 March 2009; accepted 2 March 2009; online 6 March 2009)

The title N-heterocyclic carbene derivative, C23H30N5+·Br−·0.25H2O, was synthesized using microwave heating and was characterized by 1H and 13C NMR spectroscopy and a single-crystal X-ray diffraction study. The structure of the title compound are stabilized by a network of intra- and inter­molecular C—H⋯Br hydrogen-bonding inter­actions. The crystal structure is further stabilized by π–π stacking inter­actions between benzene and imidazole fragment rings of parallel benzo[d]imidazole rings, with a separation of 3.486 (3) Å between the centroids of the benzene and imidazole rings. There is also an inter­molecular C—H⋯π inter­action in the crystal structure. The C—N bond lengths for the central benzimidazole ring are shorter than the average single C—N bond, thus showing varying degrees of double-bond character and indicating partial electron delocalization within the C—N—C—N—C fragment. The isopropyl group is disordered over two sites with occupancies of 0.792 (10) and 0.208 (10).

Related literature

For the synthesis, see: Yaşar et al. (2008[Yaşar, S., Özdemir, İ., Çetinkaya, B., Renaud, J. L. & Bruneau, C. (2008). Eur. J. Org. Chem. 12, 2142-2149.]). For general background, see: Herrmann et al. (1995[Herrmann, W. A., Elison, M., Fischer, J., Köcher, C. & Artus, G. R. J. (1995). Angew. Chem. Int. Ed. Engl. 34, 2371-2374.]); Navarro et al. (2006[Navarro, O., Marion, N., Oonishi, Y., Kelly, R. A. & Nolan, S. P. (2006). J. Org. Chem. 71, 685-692.]); Arduengo & Krafczyc (1998[Arduengo, A. J. & Krafczyc, R. (1998). Chem. Ztg, 32, 6-14.]); Larhed et al. (2002[Larhed, M., Moberg, C. & Hallberg, A. (2002). Acc. Chem. Res. 35, 717-727.]); Leadbeater & Shoemaker (2008[Leadbeater, N. E. & Shoemaker, K. M. (2008). Organometallics, 27, 1254-1258.]). For related compounds, see: Özel Güven et al. (2008a[Özel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008a). Acta Cryst. E64, o1437.],b[Özel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008b). Acta Cryst. E64, o1588-o1589.],c[Özel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008c). Acta Cryst. E64, o1655-o1656.]); Türktekin et al. (2004[Türktekin, S., Akkurt, M., Şireci, N., Küçükbay, H. & Büyükgüngör, O. (2004). Acta Cryst. E60, o817-o819.]); Akkurt et al. (2004[Akkurt, M., Öztürk, S., Küçükbay, H., Orhan, E. & Büyükgüngör, O. (2004). Acta Cryst. E60, o219-o221.], 2005[Akkurt, M., Karaca, S., Küçükbay, H., Orhan, E. & Büyükgüngör, O. (2005). Acta Cryst. E61, o2452-o2454.], 2007a[Akkurt, M., Karaca, S., Küçükbay, H. & Büyükgüngör, O. (2007a). Acta Cryst. E63, o1065-o1066.],b[Akkurt, M., Pınar, Ş., Yılmaz, Ü., Küçükbay, H. & Büyükgüngör, O. (2007b). Acta Cryst. E63, o379-o381.]); Arslan et al. (2005[Arslan, H., VanDerveer, D., Özdemir, İ., Çetinkaya, B. & Demir, S. (2005). J. Chem. Crystallogr. 35, 491-495.], 2007[Arslan, H., VanDerveer, D., Yaşar, S., Özdemir, I. & Çetinkaya, B. (2007). Acta Cryst. E63, m942-m944.], 2009[Arslan, H., VanDerveer, D., Özdemir, İ., Demir, S. & Çetinkaya, B. (2009). Acta Cryst. E65, m97-m98.] and references therein).

[Scheme 1]

Experimental

Crystal data

  • C23H30N5+·Br−·0.25H2O

  • Mr = 460.93

  • Triclinic, [P \overline 1]

  • a = 8.4944 (17) Å

  • b = 9.4960 (19) Å

  • c = 15.318 (3) Å

  • α = 83.29 (3)°

  • β = 84.69 (3)°

  • γ = 65.93 (3)°

  • V = 1119.1 (5) Å3

  • Z = 2

  • Mo Kα radiation

  • μ = 1.86 mm−1

  • T = 153 K

  • 0.34 × 0.12 × 0.10 mm
Data collection

  • Rigaku Mercury CCD diffractometer

  • Absorption correction: multi-scan (REQAB; Jacobson, 1998[Jacobson, R. (1998). REQAB. Molecular Structure Corporation, The Woodlands, Texas, USA.]) Tmin = 0.571, Tmax = 0.836

  • 7638 measured reflections

  • 3889 independent reflections

  • 2390 reflections with I > 2σ(I)

  • Rint = 0.039
Refinement

  • R[F2 > 2σ(F2)] = 0.054

  • wR(F2) = 0.144

  • S = 0.98

  • 3889 reflections

  • 282 parameters

  • 22 restraints

  • H-atom parameters constrained

  • Δρmax = 0.74 e Å−3

  • Δρmin = −0.71 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A D⋯A D—H⋯A
C1—H1⋯Br1 0.96 2.75 3.493 (7) 135
C6—H6⋯Br1i 0.96 2.75 3.702 (6) 173
C20—H20A⋯Cg1 0.96 2.95 3.445 (5) 113
Symmetry code: (i) x-1, y, z. Cg1is the centroid of the N1,C1,N2,C7,C2 ring.

Data collection: CrystalClear (Rigaku/MSC, 2006[Rigaku/MSC (2006). CrystalClear. Rigaku/MSC, The Woodlands, Texas, USA.]); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.

Supporting information

Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680900765X/hg2484sup1.cif

Structure factors: contains datablock I. DOI: 10.1107/S160053680900765X/hg2484Isup2.hkl

checkCIF report


Comment top

N-Heterocyclic carbene compounds have been shown to have wide applicability in organometallic chemistry and catalysis such as Suzuki-Miyura, Sonogashira, Stille and Heck reactions (Herrmann et al., 1995; Navarro et al., 2006; Arduengo & Krafczyc, 1998). In general, N-heterocyclic carbene chemistry is dominated by imidazole, diazepin, benzimidazole and their derivatives based carbene ligands.

Microwave-promoted synthesis is an area of increasing interest in both academic and industrial laboratories (Larhed et al., 2002). Microwave heating offers a fast, easy way to perform chemical reactions that require heat. Synthetic organic chemists have taken advantage of microwave heating in their work and found that reaction times can often be reduced from hours to minutes with a significant improvement in yields (Leadbeater & Shoemaker, 2008).

Our team has been interested in complexes of derivatives based on N-heterocyclic carbene compounds which exhibit high catalytic activities for Suzuki-Miyura, and Heck reactions. As a continuation of our systematic studies of the various N-heterocyclic carbene compounds and the catalytic properties of their palladium, ruthenium and rhodium complexes (Yaşar et al., 2008; Arslan et al., 2005, 2007, 2009, and references therein), we have prepared a new carbene compound which includes a benzo[d]imidazole and an amine group. The title compound, (I), synthesis and characterization, including its crystal structure is reported here. The compound was purified by re-crystallizationfrom an ethanol:diethylether mixture (1:2) and characterized by 1H and 13C-NMR. These data are consistent with the proposed structure given in Scheme 1.

The crystallographic asymmetric unit of the title compound contains a single 3-((1H-benzo[d]imidazol-1-yl)methyl)-1-(2-(diisopropylamino)ethyl)-1H-benzo[d]imidazol-3-ium cation, one bromide anion and 0.25 mole water molecule linked by hydrogen and stacking interactions to form a three-dimensional framework. The molecular structure of the title compound is depicted in Fig. 1.

The imidazole and benzimidazole ring systems are essentially planar with maximum deviations of 0.002 (5), 0.008 (5), 0.029 (5) and 0.020 (5) Å for N1—C1—N2—C7—C2, N3—C9—N4—C11—C16, N1—C1—N2—C7—C2—C3—C4—C5—C6 and N3—C9—N4—C11—C12—C13—C14—C15 rings, respectively. The dihedral angle between the benzimidazole rings is 69.51 (8)o. The geometric parameters for the N3—C9—N4—C11—C12—C13—C14—C15 benzimidazole ring agree with the other reported benzimidazole derivatives (Özel Güven et al., 2008a, 2008b, 2008c; Türktekin et al., 2004; Akkurt et al., 2004, 2005, 2007a, 2007b). In particular, in the N—C—N fragments, the C9—N4 bond length (1.295 (8) Å) is ca 0.08 Å shorter than the C9—N3 bond length (1.367 (9) Å), which is consistent with the partial double-bond character. The C—N bond lengths for the other benzimidazole ring are shorter than the average single C—N bond, being N1—C1 = 1.332 (7) Å, N2—C1 = 1.332 (9) Å, N1—C2 = 1.398 (7) Å, and N2—C7 = 1.399 (6) Å thus showing varying degrees of double bond character in these C—N bonds. This information indicates a partial electron delocalization within the C2—N1—C1—N2—C7 fragment. This result is confirmed by the N1—C1—N2 bond angle.

The crystal packing is stabilized mainly by C—H···Br hydrogen bonds and stacking interactions. A partially overlapped arrangement is observed between parallel benzimidazole rings (see Fig. 2) so these parallel benzimidazole rings are linked by π-π stacking interactions. The centroid-centroid separation between the parallel imidazole and benzene ring fragments (N1—C1—N2—C7—C2i and C2—C3—C4—C5—C6—C7i) of the benzimidazole ring is 3.486 (3) Å with C1···C4ii = 3.398 (7) Å [symmetry code: (i) x, y, z, (ii) 1 - x, 1 - y, 1 - z]. In addition, a C—H···π interaction is observed between Cg1 (Centroid of N1—C1—N2—C7—C2 ring) and the C20 atom: H20A···Cg1i = 2.950 Å, C20—H20A···Cg1i = 113.0° [symmetry code: (i) x, y, z].

Related literature top

For the synthesis, see: Yaşar et al. (2008). For general background, see: Herrmann et al. (1995); Navarro et al. (2006); Arduengo & Krafczyc (1998); Larhed et al. (2002); Leadbeater & Shoemaker (2008). For related compounds, see: Özel Güven et al. (2008a,b,c); Türktekin et al. (2004); Akkurt et al. (2004, 2005, 2007a,b); Arslan et al. (2005, 2007, 2009 and references therein). Cg1is the centroid of the N1,C1,N2,C7,C2 ring.

Experimental top

All reactions for the preparation of (II) and (III) were carried out under Ar inflame-dried glass-ware using standard Schlenk-type flasks (Fig. 3). All 1H and 13C-NMRs were performed in CDCl3. 1H NMR and 13C NMR spectra were recorded using a Varian As 400 Merkur spectrometer operating at 400 MHz (1H) and 100 MHz (13C). Chemical shifts (δ) are given in p.p.m. relative to TMS, coupling constants (J) in Hz. Melting points were measured in open capillary tubes with an Electrothermal-9200 melting point apparatus and are uncorrected. Microwave assisted reactions were carried out in a self-tuning single mode CEM Discover microwave unit. This consist of a continuous focused microwave power delivery system with operator-selectable power output from 0 to 300 W. The reaction was performed in an 80 ml capacity sealed tube. Temperature, pressure and power profiles were monitored using commercially available software provided by the microwave manufacturer.

Dibromomethane (1.74 g, 10.0 mmol) was slowly added to a solution of N-(2-(1H-benzo[d]imidazol-1-yl)ethyl)-N-isopropylpropan-2-amine (II) (2.45 g, 10.0 mmol) in DMF (5 ml) and the resulting mixture was stirred at 50 oC for 5 h (Fig. 3). Diethylether (10 ml) was added to obtain a white crystalline solid which was filtered off. The solid was washed with diethylether (3x10 ml), dried under vacuum and the crude product (III) was recrystallized from ethanol:diethylether. The yield was 2.72 g, 65%. In a dry 80 ml glass vessel equipped with a magnetic stirbar were added a potassium hydroxide (1 mmol) solution of benzimidazole (1 mmol) in ethanol (20 ml) and compound (III) (1 mmol). The vessel was sealed with a septum and placed in the microwave apparatus. With stirring, the reaction mixture was heated to 100 oC using an initial microwave power of 300 W and was held at this temperature for 10 min. The reaction mixture was then cooled to 50 oC, the solid was filtered off. The solvent was removed under vacuum. The product (I) was recrystallized from ethanol:diethylether (1: 2 ratio). The yield was 3.47 g, 76%, M.p.= 208–209 oC. 1H NMR (δ, 399.9 MHz, CDCl3): 0.87 (d, 12H, J= 6.6 Hz, NCH(CH3)2), 2.98 (t, 2H, J = 6.0 Hz, NCH2CH2N), 3.04 (hept, 2H, J = 6.6 Hz, NCH(CH3)2), 4.58 (t, 2H, J = 6.0 Hz, NCH2CH2N), 5.98 (s, 2H, –CH2–), 7.61–7.77 (m, 9H, C6H4 and NCH=N), 10.96 (s, 1H, NCHN). 13C NMR (δ, CDCl3): 20.8 (NCH(CH3)2), 44.5 (NCH2CH2N), 47.8 (NCH(CH3)2), 48.2 (-CH2–), 112.7, 113.2, 126.4, 126.7, 130.5 and 131.4 (C6H4), 143.4 (NCH=N), 143.6 (NCHN).

Refinement top

The H atoms were geometrically placed and treated as riding atoms with C—H = 0.96 Å, and Uiso(H) = 1.5 Ueq (parent C-atom = CH3). The other H atoms were treated the same with Uiso(H) = 1.2 Ueq (parent C-atom). We were unable to assign H atoms to the water molecule.

The isopropyl group (C22, C23, C24) is disordered. We were able to resolve C22 and C24 into two atoms. The major/minor component ratio is 0.79/0.21. The two minor component atoms were refined isotropically.

Computing details top

Data collection: CrystalClear (Rigaku/MSC, 2006); cell refinement: CrystalClear (Rigaku/MSC, 2006); data reduction: CrystalClear (Rigaku/MSC, 2006); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound, showing the atom-numbering scheme and displacement ellipsoids drawn at the 50% probability level.
[Figure 2] Fig. 2. A packing diagram for (I).
[Figure 3] Fig. 3. Synthesis of the title compound.
1-(1H-Benzimidazol-1-ylmethyl)-3-[2-(diisopropylamino)ethyl]-1H- benzimidazolium bromide 0.25-hydrate top
Crystal data top
C23H30N5+·Br−·0.25H2OZ = 2
Mr = 460.93F(000) = 481
Triclinic, P1Dx = 1.368 Mg m−3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.4944 (17) ÅCell parameters from 5869 reflections
b = 9.4960 (19) Åθ = 3.2–26.4°
c = 15.318 (3) ŵ = 1.86 mm−1
α = 83.29 (3)°T = 153 K
β = 84.69 (3)°Rod, colorless
γ = 65.93 (3)°0.34 × 0.12 × 0.10 mm
V = 1119.1 (5) Å3
Data collection top
Rigaku Mercury CCD
diffractometer		3889 independent reflections
Radiation source: Sealed Tube2390 reflections with I > 2σ(I)
Graphite Monochromator monochromatorRint = 0.039
Detector resolution: 14.6306 pixels mm-1θmax = 25.0°, θmin = 3.2°
ω scansh = −9→10
Absorption correction: multi-scan
(REQAB; Jacobson, 1998)		k = −11→11
Tmin = 0.571, Tmax = 0.836l = −17→18
7638 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.144H-atom parameters constrained
S = 0.98 w = 1/[σ2(Fo2) + (0.0659P)2]
where P = (Fo2 + 2Fc2)/3
3889 reflections(Δ/σ)max = 0.001
282 parametersΔρmax = 0.74 e Å−3
22 restraintsΔρmin = −0.71 e Å−3
Crystal data top
C23H30N5+·Br−·0.25H2Oγ = 65.93 (3)°
Mr = 460.93V = 1119.1 (5) Å3
Triclinic, P1Z = 2
a = 8.4944 (17) ÅMo Kα radiation
b = 9.4960 (19) ŵ = 1.86 mm−1
c = 15.318 (3) ÅT = 153 K
α = 83.29 (3)°0.34 × 0.12 × 0.10 mm
β = 84.69 (3)°
Data collection top
Rigaku Mercury CCD
diffractometer		3889 independent reflections
Absorption correction: multi-scan
(REQAB; Jacobson, 1998)		2390 reflections with I > 2σ(I)
Tmin = 0.571, Tmax = 0.836Rint = 0.039
7638 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.05422 restraints
wR(F2) = 0.144H-atom parameters constrained
S = 0.98Δρmax = 0.74 e Å−3
3889 reflectionsΔρmin = −0.71 e Å−3
282 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
Br10.78369 (7)0.88546 (6)0.57962 (4)0.05288 (19)
N10.6315 (5)0.5169 (5)0.6422 (2)0.0430 (10)
N20.3772 (6)0.7103 (4)0.6314 (3)0.0499 (11)
N30.1831 (7)0.9149 (5)0.7189 (3)0.0544 (12)
N40.0314 (6)0.9404 (5)0.8478 (3)0.0575 (12)
N50.7558 (5)0.4797 (5)0.8187 (2)0.0411 (10)
C10.5416 (8)0.6676 (6)0.6495 (3)0.0511 (14)
H10.58900.73640.66580.061*
C20.5188 (6)0.4562 (5)0.6178 (3)0.0334 (10)
C30.5464 (6)0.3083 (5)0.5999 (3)0.0352 (10)
H30.65680.22310.60570.042*
C40.4050 (6)0.2909 (5)0.5732 (3)0.0375 (11)
H40.41790.19060.55950.045*
C50.2451 (6)0.4136 (5)0.5654 (3)0.0416 (12)
H50.15080.39490.54700.050*
C60.2162 (7)0.5628 (6)0.5833 (3)0.0475 (13)
H60.10600.64800.57700.057*
C70.3565 (7)0.5795 (5)0.6106 (3)0.0382 (11)
C80.2416 (10)0.8685 (6)0.6319 (4)0.0700 (18)
H8A0.28550.93970.60070.084*
H8B0.14520.87430.60130.084*
C90.0487 (8)0.8983 (6)0.7688 (4)0.0629 (17)
H9−0.02640.85880.74710.075*
C110.1667 (7)0.9865 (5)0.8532 (3)0.0416 (12)
C120.2084 (7)1.0432 (5)0.9234 (3)0.0470 (13)
H120.14381.05290.97880.056*
C130.3479 (9)1.0850 (7)0.9095 (4)0.0683 (17)
H130.37761.12810.95590.082*
C140.4463 (10)1.0666 (8)0.8304 (5)0.091 (2)
H140.54431.09370.82450.109*
C150.4059 (9)1.0098 (7)0.7597 (4)0.078 (2)
H150.47220.99840.70470.093*
C160.2652 (8)0.9710 (5)0.7730 (3)0.0497 (14)
C170.8119 (6)0.4275 (7)0.6628 (3)0.0518 (14)
H17A0.87390.49320.65280.062*
H17B0.86340.34530.62470.062*
C180.8254 (7)0.3596 (6)0.7583 (3)0.0461 (13)
H18A0.76360.29360.76800.055*
H18B0.94440.29740.76960.055*
C190.6381 (6)0.4499 (5)0.8896 (3)0.0348 (10)
H190.61130.52730.93020.042*
C200.4689 (6)0.4737 (6)0.8519 (3)0.0462 (12)
H20A0.41860.57610.82290.069*
H20B0.39110.46100.89860.069*
H20C0.49030.39890.81030.069*
C210.7152 (7)0.2931 (6)0.9424 (3)0.0489 (13)
H21A0.74760.21220.90370.073*
H21B0.63130.28310.98640.073*
H21C0.81530.28520.97050.073*
C220.9092 (11)0.5022 (9)0.8612 (5)0.054 (2)0.792 (10)
H220.96950.41460.90130.065*0.792 (10)
C22'0.843 (2)0.582 (2)0.8331 (14)0.021 (5)*0.208 (10)
H22'0.94550.55710.80480.025*0.208 (10)
C231.0298 (9)0.5239 (10)0.7878 (5)0.098 (2)
H23A1.14700.46600.80380.118*
H23B1.00830.63180.77740.118*
H23C1.01100.48800.73530.118*
C240.8241 (13)0.6470 (11)0.9089 (6)0.090 (3)0.792 (10)
H24A0.72100.71560.88030.136*0.792 (10)
H24B0.90190.69740.90790.136*0.792 (10)
H24C0.79500.62020.96870.136*0.792 (10)
C24'0.729 (2)0.726 (2)0.8681 (14)0.022 (5)*0.208 (10)
H24D0.63290.77820.83120.034*0.208 (10)
H24E0.79080.79080.86970.034*0.208 (10)
H24F0.68780.70520.92650.034*0.208 (10)
O10.968 (2)0.133 (2)0.5686 (12)0.076 (5)0.25
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Br10.0484 (3)0.0364 (3)0.0800 (4)−0.0213 (2)−0.0238 (3)0.0042 (2)
N10.061 (2)0.061 (3)0.024 (2)−0.042 (2)0.0074 (18)−0.0127 (18)
N20.093 (3)0.030 (2)0.028 (2)−0.025 (2)−0.002 (2)−0.0085 (18)
N30.097 (4)0.031 (2)0.030 (2)−0.017 (2)−0.011 (2)−0.0116 (18)
N40.054 (3)0.050 (3)0.068 (3)−0.015 (2)−0.003 (2)−0.027 (2)
N50.058 (2)0.051 (2)0.026 (2)−0.033 (2)0.0081 (18)−0.0133 (18)
C10.097 (4)0.051 (3)0.026 (3)−0.050 (3)0.006 (3)−0.011 (2)
C20.045 (2)0.038 (3)0.025 (2)−0.025 (2)0.007 (2)−0.0089 (19)
C30.042 (2)0.035 (2)0.030 (3)−0.017 (2)0.004 (2)−0.008 (2)
C40.051 (3)0.036 (3)0.032 (3)−0.023 (2)0.000 (2)−0.009 (2)
C50.041 (3)0.044 (3)0.041 (3)−0.016 (2)−0.002 (2)−0.012 (2)
C60.053 (3)0.046 (3)0.028 (3)−0.002 (3)−0.003 (2)−0.014 (2)
C70.064 (3)0.034 (3)0.019 (2)−0.020 (2)−0.002 (2)−0.0061 (19)
C80.128 (5)0.032 (3)0.038 (3)−0.017 (3)−0.014 (3)−0.004 (2)
C90.057 (3)0.048 (3)0.077 (5)−0.006 (3)−0.009 (3)−0.032 (3)
C110.058 (3)0.027 (2)0.036 (3)−0.012 (2)−0.003 (2)−0.005 (2)
C120.068 (3)0.034 (3)0.035 (3)−0.015 (3)−0.005 (3)−0.006 (2)
C130.100 (5)0.065 (4)0.055 (4)−0.042 (4)0.002 (3)−0.033 (3)
C140.129 (5)0.098 (5)0.088 (5)−0.088 (4)0.046 (4)−0.058 (4)
C150.145 (5)0.067 (4)0.053 (4)−0.078 (4)0.041 (4)−0.031 (3)
C160.097 (4)0.027 (3)0.031 (3)−0.029 (3)−0.004 (3)−0.009 (2)
C170.054 (3)0.081 (4)0.041 (3)−0.047 (3)0.014 (2)−0.024 (3)
C180.048 (3)0.057 (3)0.036 (3)−0.022 (3)0.011 (2)−0.019 (2)
C190.038 (2)0.040 (3)0.026 (2)−0.014 (2)0.0014 (19)−0.004 (2)
C200.047 (3)0.060 (3)0.036 (3)−0.025 (3)−0.002 (2)−0.002 (2)
C210.051 (3)0.044 (3)0.044 (3)−0.014 (3)0.000 (2)0.006 (2)
C220.092 (5)0.050 (4)0.035 (4)−0.047 (4)0.021 (4)−0.008 (3)
C230.076 (4)0.142 (6)0.109 (6)−0.067 (5)−0.014 (4)−0.037 (5)
C240.131 (7)0.119 (7)0.075 (6)−0.100 (6)0.029 (6)−0.053 (5)
O10.070 (10)0.081 (11)0.091 (13)−0.040 (9)0.006 (9)−0.027 (10)
Geometric parameters (Å, º) top
N1—C11.332 (6)C14—C151.392 (8)
N1—C21.399 (5)C14—H140.9600
N1—C171.461 (7)C15—C161.379 (8)
N2—C11.333 (7)C15—H150.9600
N2—C71.398 (5)C17—C181.522 (7)
N2—C81.474 (7)C17—H17A0.9600
N3—C91.367 (7)C17—H17B0.9600
N3—C161.404 (6)C18—H18A0.9600
N3—C81.432 (7)C18—H18B0.9600
N4—C91.296 (7)C19—C201.519 (6)
N4—C111.399 (6)C19—C211.524 (7)
N5—C181.450 (6)C19—H190.9600
N5—C22'1.487 (19)C20—H20A0.9599
N5—C191.489 (5)C20—H20B0.9599
N5—C221.608 (8)C20—H20C0.9599
C1—H10.9600C21—H21A0.9599
C2—C31.382 (6)C21—H21B0.9599
C2—C71.402 (7)C21—H21C0.9599
C3—C41.380 (6)C22—C231.504 (9)
C3—H30.9600C22—C241.507 (10)
C4—C51.387 (6)C22—H220.9600
C4—H40.9600C22—H22'1.045 (6)
C5—C61.393 (6)C22'—C24'1.44 (2)
C5—H50.9600C22'—H22'0.889 (17)
C6—C71.372 (7)C23—H22'0.693 (7)
C6—H60.9600C23—H23A0.9600
C8—H8A0.9600C23—H23B0.9600
C8—H8B0.9600C23—H23C0.9600
C9—H90.9600C24—H24A0.9600
C11—C121.391 (7)C24—H24B0.9600
C11—C161.407 (7)C24—H24C0.9600
C12—C131.387 (8)C24'—H24D0.9600
C12—H120.9600C24'—H24E0.9600
C13—C141.392 (8)C24'—H24F0.9600
C13—H130.9600
C1—N1—C2107.8 (4)C15—C16—N3133.2 (5)
C1—N1—C17126.4 (4)C15—C16—C11122.7 (5)
C2—N1—C17125.6 (4)N3—C16—C11104.0 (5)
C1—N2—C7108.1 (4)N1—C17—C18110.7 (4)
C1—N2—C8125.8 (5)N1—C17—H17A109.5
C7—N2—C8126.1 (5)C18—C17—H17A109.5
C9—N3—C16106.5 (4)N1—C17—H17B109.5
C9—N3—C8127.1 (5)C18—C17—H17B109.5
C16—N3—C8126.1 (5)H17A—C17—H17B108.1
C9—N4—C11104.7 (5)N5—C18—C17111.7 (4)
C18—N5—C22'123.0 (8)N5—C18—H18A109.3
C18—N5—C19113.1 (3)C17—C18—H18A109.3
C22'—N5—C19119.4 (8)N5—C18—H18B109.3
C18—N5—C22110.5 (4)C17—C18—H18B109.3
C19—N5—C22109.9 (3)H18A—C18—H18B108.0
N1—C1—N2111.1 (4)N5—C19—C20110.0 (4)
N1—C1—H1124.5N5—C19—C21114.8 (4)
N2—C1—H1124.5C20—C19—C21111.1 (4)
C3—C2—N1131.3 (4)N5—C19—H19106.8
C3—C2—C7121.9 (4)C20—C19—H19106.8
N1—C2—C7106.8 (4)C21—C19—H19106.8
C4—C3—C2115.7 (4)C19—C20—H20A109.5
C4—C3—H3122.1C19—C20—H20B109.5
C2—C3—H3122.1H20A—C20—H20B109.5
C3—C4—C5122.2 (4)C19—C20—H20C109.5
C3—C4—H4118.9H20A—C20—H20C109.5
C5—C4—H4118.9H20B—C20—H20C109.5
C4—C5—C6122.4 (4)C19—C21—H21A109.5
C4—C5—H5118.8C19—C21—H21B109.5
C6—C5—H5118.8H21A—C21—H21B109.5
C7—C6—C5115.3 (5)C19—C21—H21C109.5
C7—C6—H6122.4H21A—C21—H21C109.5
C5—C6—H6122.4H21B—C21—H21C109.5
C6—C7—N2131.2 (5)C23—C22—C24110.2 (6)
C6—C7—C2122.5 (4)C23—C22—N5108.3 (5)
N2—C7—C2106.3 (4)C24—C22—N5105.8 (6)
N3—C8—N2113.0 (4)C23—C22—H22110.8
N3—C8—H8A109.0C24—C22—H22110.8
N2—C8—H8A109.0N5—C22—H22110.8
N3—C8—H8B109.0C24'—C22'—N5114.1 (14)
N2—C8—H8B109.0N5—C22'—H22'113.3 (17)
H8A—C8—H8B107.8C22—C23—H23A109.5
N4—C9—N3114.3 (5)C22—C23—H23B109.5
N4—C9—H9122.9H23A—C23—H23B109.5
N3—C9—H9122.9C22—C23—H23C109.5
C12—C11—N4129.0 (5)H23A—C23—H23C109.5
C12—C11—C16120.5 (5)H23B—C23—H23C109.5
N4—C11—C16110.5 (4)C22—C24—H24A109.5
C13—C12—C11116.8 (5)C22—C24—H24B109.5
C13—C12—H12121.6H24A—C24—H24B109.5
C11—C12—H12121.6C22—C24—H24C109.5
C12—C13—C14122.2 (5)H24A—C24—H24C109.5
C12—C13—H13118.9H24B—C24—H24C109.5
C14—C13—H13118.9C22'—C24'—H24D109.5
C13—C14—C15121.5 (6)C22'—C24'—H24E109.5
C13—C14—H14119.3H24D—C24'—H24E109.5
C15—C14—H14119.3C22'—C24'—H24F109.5
C16—C15—C14116.3 (5)H24D—C24'—H24F109.5
C16—C15—H15121.9H24E—C24'—H24F109.5
C14—C15—H15121.9
C2—N1—C1—N2−0.1 (5)C11—C12—C13—C14−2.2 (9)
C17—N1—C1—N2−175.5 (4)C12—C13—C14—C152.3 (11)
C7—N2—C1—N10.0 (5)C13—C14—C15—C16−1.0 (10)
C8—N2—C1—N1−179.2 (4)C14—C15—C16—N3178.3 (6)
C1—N1—C2—C3178.5 (5)C14—C15—C16—C11−0.2 (9)
C17—N1—C2—C3−6.1 (7)C9—N3—C16—C15−179.9 (6)
C1—N1—C2—C70.2 (5)C8—N3—C16—C156.3 (9)
C17—N1—C2—C7175.6 (4)C9—N3—C16—C11−1.1 (5)
N1—C2—C3—C4−176.9 (4)C8—N3—C16—C11−174.9 (5)
C7—C2—C3—C41.1 (6)C12—C11—C16—C150.2 (8)
C2—C3—C4—C5−0.5 (7)N4—C11—C16—C15179.3 (5)
C3—C4—C5—C60.5 (7)C12—C11—C16—N3−178.7 (4)
C4—C5—C6—C7−1.1 (7)N4—C11—C16—N30.4 (5)
C5—C6—C7—N2177.7 (5)C1—N1—C17—C1890.7 (5)
C5—C6—C7—C21.7 (7)C2—N1—C17—C18−83.9 (5)
C1—N2—C7—C6−176.3 (5)C22'—N5—C18—C17−71.1 (11)
C8—N2—C7—C62.9 (8)C19—N5—C18—C17133.1 (4)
C1—N2—C7—C20.1 (5)C22—N5—C18—C17−103.2 (5)
C8—N2—C7—C2179.4 (4)N1—C17—C18—N5−61.6 (5)
C3—C2—C7—C6−1.8 (7)C18—N5—C19—C20−71.9 (5)
N1—C2—C7—C6176.7 (4)C22'—N5—C19—C20131.3 (10)
C3—C2—C7—N2−178.7 (4)C22—N5—C19—C20164.0 (4)
N1—C2—C7—N2−0.2 (5)C18—N5—C19—C2154.3 (5)
C9—N3—C8—N2−91.4 (7)C22'—N5—C19—C21−102.6 (10)
C16—N3—C8—N281.2 (7)C22—N5—C19—C21−69.8 (5)
C1—N2—C8—N3−74.6 (7)C18—N5—C22—C2351.6 (7)
C7—N2—C8—N3106.3 (6)C22'—N5—C22—C23−68.6 (15)
C11—N4—C9—N3−1.3 (6)C19—N5—C22—C23177.2 (5)
C16—N3—C9—N41.6 (7)C18—N5—C22—C24169.8 (5)
C8—N3—C9—N4175.3 (5)C22'—N5—C22—C2449.5 (15)
C9—N4—C11—C12179.6 (5)C19—N5—C22—C24−64.6 (6)
C9—N4—C11—C160.5 (6)C18—N5—C22'—C24'158.1 (13)
N4—C11—C12—C13−178.0 (5)C19—N5—C22'—C24'−47.5 (19)
C16—C11—C12—C131.0 (7)C22—N5—C22'—C24'−127 (3)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C1—H1···Br10.962.753.493 (7)135
C6—H6···Br1i0.962.753.702 (6)173
C20—H20A···Cg10.962.953.445 (5)113
Symmetry code: (i) x−1, y, z.

Experimental details

Crystal data
Chemical formulaC23H30N5+·Br−·0.25H2O
Mr460.93
Crystal system, space groupTriclinic, P1
Temperature (K)153
a, b, c (Å)8.4944 (17), 9.4960 (19), 15.318 (3)
α, β, γ (°)83.29 (3), 84.69 (3), 65.93 (3)
V (Å3)1119.1 (5)
Z2
Radiation typeMo Kα
µ (mm−1)1.86
Crystal size (mm)0.34 × 0.12 × 0.10
Data collection
DiffractometerRigaku Mercury CCD
diffractometer
Absorption correctionMulti-scan
(REQAB; Jacobson, 1998)
Tmin, Tmax0.571, 0.836
No. of measured, independent and
observed [I > 2σ(I)] reflections		7638, 3889, 2390
Rint0.039
(sin θ/λ)max (Å−1)0.595
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.054, 0.144, 0.98
No. of reflections3889
No. of parameters282
No. of restraints22
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.74, −0.71

Computer programs: CrystalClear (Rigaku/MSC, 2006), SHELXTL (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C1—H1···Br10.962.753.493 (7)135
C6—H6···Br1i0.962.753.702 (6)173
C20—H20A···Cg10.962.953.445 (5)113
Symmetry code: (i) x−1, y, z.
 

Acknowledgements

We thank the İnönü University Research Fund (İÜ BAP: 2008/Güdümlü 3) for financial support.

References

First citationAkkurt, M., Karaca, S., Küçükbay, H. & Büyükgüngör, O. (2007a). Acta Cryst. E63, o1065–o1066.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationAkkurt, M., Karaca, S., Küçükbay, H., Orhan, E. & Büyükgüngör, O. (2005). Acta Cryst. E61, o2452–o2454.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationAkkurt, M., Öztürk, S., Küçükbay, H., Orhan, E. & Büyükgüngör, O. (2004). Acta Cryst. E60, o219–o221.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationAkkurt, M., Pınar, Ş., Yılmaz, Ü., Küçükbay, H. & Büyükgüngör, O. (2007b). Acta Cryst. E63, o379–o381.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationArduengo, A. J. & Krafczyc, R. (1998). Chem. Ztg, 32, 6–14.  CAS Google Scholar
 First citationArslan, H., VanDerveer, D., Özdemir, İ., Çetinkaya, B. & Demir, S. (2005). J. Chem. Crystallogr. 35, 491–495.  Web of Science CSD CrossRef CAS Google Scholar
 First citationArslan, H., VanDerveer, D., Özdemir, İ., Demir, S. & Çetinkaya, B. (2009). Acta Cryst. E65, m97–m98.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationArslan, H., VanDerveer, D., Yaşar, S., Özdemir, I. & Çetinkaya, B. (2007). Acta Cryst. E63, m942–m944.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationHerrmann, W. A., Elison, M., Fischer, J., Köcher, C. & Artus, G. R. J. (1995). Angew. Chem. Int. Ed. Engl. 34, 2371–2374.  CrossRef CAS Web of Science Google Scholar
 First citationJacobson, R. (1998). REQAB. Molecular Structure Corporation, The Woodlands, Texas, USA.  Google Scholar
 First citationLarhed, M., Moberg, C. & Hallberg, A. (2002). Acc. Chem. Res. 35, 717-727.  Web of Science CrossRef PubMed CAS Google Scholar
 First citationLeadbeater, N. E. & Shoemaker, K. M. (2008). Organometallics, 27, 1254–1258.  Web of Science CrossRef CAS Google Scholar
 First citationNavarro, O., Marion, N., Oonishi, Y., Kelly, R. A. & Nolan, S. P. (2006). J. Org. Chem. 71, 685–692.  Web of Science CrossRef PubMed CAS Google Scholar
 First citationÖzel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008a). Acta Cryst. E64, o1437.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationÖzel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008b). Acta Cryst. E64, o1588–o1589.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationÖzel Güven, Ö. el, Erdoğan, T., Coles, S. J. & Hökelek, T. (2008c). Acta Cryst. E64, o1655–o1656.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationRigaku/MSC (2006). CrystalClear. Rigaku/MSC, The Woodlands, Texas, USA.  Google Scholar
 First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
 First citationTürktekin, S., Akkurt, M., Şireci, N., Küçükbay, H. & Büyükgüngör, O. (2004). Acta Cryst. E60, o817–o819.  Web of Science CSD CrossRef IUCr Journals Google Scholar
 First citationYaşar, S., Özdemir, İ., Çetinkaya, B., Renaud, J. L. & Bruneau, C. (2008). Eur. J. Org. Chem. 12, 2142–2149.  Google Scholar

This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.

Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890
Volume 65| Part 4| April 2009| Pages o699-o700
doi:10.1107/S160053680900765X
Follow Acta Cryst. E
Sign up for e-alerts
E-alerts
Follow Acta Cryst. on Twitter
Twitter
Follow us on facebook
Facebook
Sign up for RSS feeds
RSS