organic compounds
3-Methylthiobenzamide
aDepartment of Chemistry, Quaid-i-Azam University, Islamabad-45320, Pakistan, and bDepartment of Chemistry, Saint Mary's University, Halifax, Nova Scotia, Canada B3H 3C3
*Correspondence e-mail: shameed@qau.edu.pk
In the title compound, C8H9NS, the dihedral angle between the aromatic ring and the thioamide fragment is 36.0 (2)°. There are π-stacking interactions between coplanar aryl fragments, with a centroid–centroid separation of 3.658 (2) Å. In addition, there are intermolecular hydrogen bonds between the amino group and the S atoms.
Related literature
For our previous work on the synthesis and biological screening of five-membered heterocycles, see: Akhtar et al. (2006, 2007, 2008); Serwar et al. (2009). For related structures, see: Jian et al. (2006); Khan et al. (2009a,b).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2008); cell SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
10.1107/S1600536809019849/bt2967sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809019849/bt2967Isup2.hkl
The title compound was synthesized from 3-methylbenzonitrile according to a reported procedure (Khan et al., 2009a). The recrystallization of the product from chloroform afforded crystals suitable for X-ray analysis.
The hydrogen atoms were placed in geometrically idealized positions with C—H distances of 0.93Å (aromatic C—H), 0.96Å (methyl) and 0.86Å (amide N—H) and constrained to ride on the parent atom with Uiso(H) = 1.2 Ueq(C) for aromatic and amide protons or Uiso(H) = 1.5 Ueq(Cmethyl).
Data collection: APEX2 (Bruker, 2008); cell
SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C8H9NS | F(000) = 320 |
Mr = 151.22 | Dx = 1.265 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2572 reflections |
a = 7.717 (5) Å | θ = 2.7–27.1° |
b = 10.267 (7) Å | µ = 0.33 mm−1 |
c = 10.100 (7) Å | T = 296 K |
β = 97.186 (9)° | Block, yellow |
V = 794.0 (9) Å3 | 0.37 × 0.27 × 0.20 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 1797 independent reflections |
Radiation source: fine-focus sealed tube | 1447 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 27.5°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | h = −10→9 |
Tmin = 0.793, Tmax = 0.930 | k = −13→13 |
6234 measured reflections | l = −11→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0556P)2 + 0.242P] where P = (Fo2 + 2Fc2)/3 |
1797 reflections | (Δ/σ)max < 0.001 |
92 parameters | Δρmax = 0.22 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C8H9NS | V = 794.0 (9) Å3 |
Mr = 151.22 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.717 (5) Å | µ = 0.33 mm−1 |
b = 10.267 (7) Å | T = 296 K |
c = 10.100 (7) Å | 0.37 × 0.27 × 0.20 mm |
β = 97.186 (9)° |
Bruker APEXII CCD diffractometer | 1797 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | 1447 reflections with I > 2σ(I) |
Tmin = 0.793, Tmax = 0.930 | Rint = 0.021 |
6234 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.22 e Å−3 |
1797 reflections | Δρmin = −0.29 e Å−3 |
92 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.13324 (7) | 0.62675 (4) | 0.16035 (4) | 0.05023 (19) | |
N1 | 0.0243 (2) | 0.38549 (15) | 0.17149 (16) | 0.0521 (4) | |
H1A | 0.0187 | 0.3113 | 0.2103 | 0.063* | |
H1B | −0.0260 | 0.3963 | 0.0914 | 0.063* | |
C2 | 0.1933 (2) | 0.45618 (15) | 0.37261 (16) | 0.0358 (4) | |
C1 | 0.1099 (2) | 0.48241 (16) | 0.23470 (16) | 0.0379 (4) | |
C3 | 0.2661 (2) | 0.33439 (17) | 0.40481 (18) | 0.0406 (4) | |
H3A | 0.2535 | 0.2683 | 0.3414 | 0.049* | |
C7 | 0.2072 (2) | 0.55347 (17) | 0.46931 (18) | 0.0435 (4) | |
H7A | 0.1589 | 0.6352 | 0.4492 | 0.052* | |
C4 | 0.3569 (2) | 0.30980 (18) | 0.52939 (19) | 0.0455 (4) | |
C5 | 0.3695 (2) | 0.4084 (2) | 0.62387 (18) | 0.0500 (5) | |
H5A | 0.4303 | 0.3935 | 0.7079 | 0.060* | |
C6 | 0.2927 (3) | 0.5286 (2) | 0.59491 (19) | 0.0501 (5) | |
H6A | 0.2989 | 0.5927 | 0.6604 | 0.060* | |
C8 | 0.4466 (3) | 0.1803 (2) | 0.5575 (2) | 0.0671 (6) | |
H8A | 0.3710 | 0.1115 | 0.5210 | 0.101* | |
H8B | 0.4729 | 0.1686 | 0.6522 | 0.101* | |
H8C | 0.5529 | 0.1786 | 0.5173 | 0.101* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0774 (4) | 0.0330 (2) | 0.0387 (3) | 0.0000 (2) | 0.0007 (2) | 0.00264 (17) |
N1 | 0.0726 (11) | 0.0435 (8) | 0.0363 (8) | −0.0142 (7) | −0.0089 (7) | 0.0048 (6) |
C2 | 0.0384 (8) | 0.0362 (8) | 0.0329 (8) | −0.0031 (6) | 0.0046 (6) | 0.0001 (6) |
C1 | 0.0439 (9) | 0.0345 (8) | 0.0351 (9) | 0.0016 (6) | 0.0042 (7) | −0.0013 (6) |
C3 | 0.0461 (9) | 0.0380 (8) | 0.0379 (9) | −0.0003 (7) | 0.0066 (7) | 0.0007 (7) |
C7 | 0.0508 (10) | 0.0396 (9) | 0.0398 (9) | −0.0018 (7) | 0.0045 (8) | −0.0032 (7) |
C4 | 0.0433 (9) | 0.0492 (10) | 0.0446 (10) | 0.0012 (7) | 0.0078 (7) | 0.0129 (8) |
C5 | 0.0482 (10) | 0.0674 (12) | 0.0332 (9) | −0.0082 (9) | −0.0003 (8) | 0.0076 (8) |
C6 | 0.0576 (11) | 0.0554 (11) | 0.0369 (10) | −0.0097 (9) | 0.0040 (8) | −0.0083 (8) |
C8 | 0.0737 (14) | 0.0647 (14) | 0.0630 (14) | 0.0205 (11) | 0.0093 (11) | 0.0223 (11) |
S1—C1 | 1.6811 (19) | C7—H7A | 0.9300 |
N1—C1 | 1.315 (2) | C4—C5 | 1.386 (3) |
N1—H1A | 0.8600 | C4—C8 | 1.509 (3) |
N1—H1B | 0.8600 | C5—C6 | 1.384 (3) |
C2—C7 | 1.392 (2) | C5—H5A | 0.9300 |
C2—C3 | 1.393 (2) | C6—H6A | 0.9300 |
C2—C1 | 1.484 (2) | C8—H8A | 0.9600 |
C3—C4 | 1.385 (3) | C8—H8B | 0.9600 |
C3—H3A | 0.9300 | C8—H8C | 0.9600 |
C7—C6 | 1.379 (3) | ||
C1—N1—H1A | 120.0 | C3—C4—C5 | 118.45 (17) |
C1—N1—H1B | 120.0 | C3—C4—C8 | 119.99 (18) |
H1A—N1—H1B | 120.0 | C5—C4—C8 | 121.49 (19) |
C7—C2—C3 | 119.16 (16) | C6—C5—C4 | 120.95 (18) |
C7—C2—C1 | 120.98 (15) | C6—C5—H5A | 119.5 |
C3—C2—C1 | 119.80 (15) | C4—C5—H5A | 119.5 |
N1—C1—C2 | 116.80 (15) | C7—C6—C5 | 120.17 (17) |
N1—C1—S1 | 121.71 (14) | C7—C6—H6A | 119.9 |
C2—C1—S1 | 121.41 (12) | C5—C6—H6A | 119.9 |
C4—C3—C2 | 121.29 (17) | C4—C8—H8A | 109.5 |
C4—C3—H3A | 119.4 | C4—C8—H8B | 109.5 |
C2—C3—H3A | 119.4 | H8A—C8—H8B | 109.5 |
C6—C7—C2 | 119.91 (17) | C4—C8—H8C | 109.5 |
C6—C7—H7A | 120.0 | H8A—C8—H8C | 109.5 |
C2—C7—H7A | 120.0 | H8B—C8—H8C | 109.5 |
N1—C1—C2—C3 | 36.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···S1i | 0.86 | 2.66 | 3.455 (2) | 155 |
N1—H1B···S1ii | 0.86 | 2.58 | 3.422 (3) | 165 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C8H9NS |
Mr | 151.22 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 7.717 (5), 10.267 (7), 10.100 (7) |
β (°) | 97.186 (9) |
V (Å3) | 794.0 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.33 |
Crystal size (mm) | 0.37 × 0.27 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2008) |
Tmin, Tmax | 0.793, 0.930 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6234, 1797, 1447 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.112, 1.08 |
No. of reflections | 1797 |
No. of parameters | 92 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.29 |
Computer programs: APEX2 (Bruker, 2008), SAINT (Bruker, 2008), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···S1i | 0.86 | 2.66 | 3.455 (2) | 155.0 |
N1—H1B···S1ii | 0.86 | 2.58 | 3.422 (3) | 164.9 |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y+1, −z. |
Acknowledgements
The authors thank the HEC, Pakistan for a PhD fellowship awarded to MuHK under the indigenous PhD Program. JDM thanks Saint Mary's University for funding.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Thioamides are not only important intermediates in the synthesis of heterocyclic compounds but they also possess enormous biologically activities as reported in our previous articles (Khan et al., 2009a). In the present article, we report the crystal structure of 3-methylthiobenzamide, synthesized as a continuation of our previous work on the synthesis and biological screenings of five membered heterocycles (Akhtar et al., 2006, 2007, 2008; Serwar et al., 2009).
There are two distinct hydrogen bonding interactions between the nitrogen and sulfur atoms. The first arranges the dimer with N···S distances of 3.422 (3)Å and the second links two thioamide dimers through another N···S interaction on the order of 3.455 (2) Å. These N—H···S hydrogen bonding interactions are similar to those seen in p-trifluoromethylbenzothioamide where the corresponding interactions are between 3.3735Å and 3.5133Å (Jian et al., 2006), in 4-chlorobenzothioamide where the N···S distances are 3.3769 (15)Å and 3.4527 (15)Å (Khan et al., 2009a) and in 4-bromobenzothioamide where the N···S distances are between 3.500 (2)Å and 3.605 (3) Å (Khan et al., 2009b).