organic compounds
Diethyl 2-[(5-methoxy-2-methyl-1-phenylsulfonyl-1H-indol-3-yl)methylene]malonate
aCentre of Advanced Study in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai 600 025, India, and bDepartment of Organic Chemistry, University of Madras, Guindy Campus, Chennai 600 025, India
*Correspondence e-mail: mnpsy2004@yahoo.com
In the title compound, C24H25NO7S, the sulfonyl-bound phenyl ring is approximately perpendicular to the indole ring system [dihedral angle = 87.72 (5)°]. The methyl group of one of the ester units is disordered over two positions with occupancies of 0.527 (13) and 0.473 (13). An intramolecular C—H⋯O hydrogen bond is observed. In the molecules are linked into a ribbon structure running along the c axis by intermolecular C—H⋯O hydrogen bonds and C—H⋯π interactions involving the pyrrole ring.
Related literature
For general background on indoles, see: El-Sayed et al. (1986); Farhanullah et al. (2004); Okabe & Adachi (1998); Schollmeyer et al. (1995). For the Thorpe–Ingold effect, see: Bassindale (1984). For see: Beddoes et al. (1986). For a related structure, see: Chakkaravarthi et al. (2008).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809019369/ci2774sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809019369/ci2774Isup2.hkl
A solution of TiCl4 (0.37 ml, 3.34 mmol) in dry dichloromethane (DCM; 20 ml) was added drop by drop into dry DCM (10 ml) kept at 273 K and stirred at the same temperature for 45 min. To this, a solution of 5-methoxy-2-methyl-1-(phenylsulfonyl)-1H-indole-3-carbaldehyde (0.5 g, 1.52 mmol) and diethylmalonate (0.24 ml, 1.60 mmol) in dry DCM (20 ml) was slowly added. After the addition was completed, the reaction mixture was stirred at 273 K for 1 h. A solution of pyridine (0.6 ml, 6.08 mmol) in dry DCM (20 ml) was then added dropwise for 30 min. The content was stirred at 273 K for 12 h and then at room temperature for 48 h. The reaction mass was quenched with water and extracted with CHCl3 (2 × 10 ml). The organic layer was washed with 0.5 M HCl (2 × 20 ml) followed by brine solution (2 × 20 ml). Removal of solvent followed by flash column chromatographic purification (n-hexane–ethyl acetate 97:3) afforded the title compound as a yellow solid. Single crystals were obtained by recrystallizing the compound from n-hexane–ethyl acetate (97:3).
The methyl group at the end of one of ethyl carboxylate chains is disordered over two positions (C24 and C24') with refined occupancies of 0.527 (13) and 0.473 (13). The C23—C24 and C23—C24'bond distances were restrained to be 1.50 (5) Å. The components of the anisotropic displacement parameters of atoms C13, C14, C23 and O6 in the direction of the bond between them were restrained to be equal within an effective standard deviation of 0.001. The Uij parameters of atoms C24 and C24' were restrained to an approximate isotropic behaviour. H atoms were positioned geometrically and refined using riding model with C-H = 0.93-0.97 Å and Uiso(H) = 1.2Ueq(C) and 1.5Ueq(Cmethyl).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).C24H25NO7S | Z = 2 |
Mr = 471.51 | F(000) = 496 |
Triclinic, P1 | Dx = 1.339 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 8.7597 (2) Å | Cell parameters from 6218 reflections |
b = 10.9029 (2) Å | θ = 1.6–29.1° |
c = 12.5186 (3) Å | µ = 0.18 mm−1 |
α = 88.402 (1)° | T = 293 K |
β = 79.723 (1)° | Block, yellow |
γ = 83.635 (2)° | 0.22 × 0.18 × 0.15 mm |
V = 1169.13 (4) Å3 |
Bruker Kappa-APEXII area-detector diffractometer | 6218 independent reflections |
Radiation source: fine-focus sealed tube | 4628 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ω and ϕ scans | θmax = 29.1°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | h = −11→11 |
Tmin = 0.964, Tmax = 0.971 | k = −14→14 |
27454 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.176 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.09P)2 + 0.3748P] where P = (Fo2 + 2Fc2)/3 |
6218 reflections | (Δ/σ)max = 0.001 |
309 parameters | Δρmax = 0.66 e Å−3 |
16 restraints | Δρmin = −0.45 e Å−3 |
C24H25NO7S | γ = 83.635 (2)° |
Mr = 471.51 | V = 1169.13 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 8.7597 (2) Å | Mo Kα radiation |
b = 10.9029 (2) Å | µ = 0.18 mm−1 |
c = 12.5186 (3) Å | T = 293 K |
α = 88.402 (1)° | 0.22 × 0.18 × 0.15 mm |
β = 79.723 (1)° |
Bruker Kappa-APEXII area-detector diffractometer | 6218 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2001) | 4628 reflections with I > 2σ(I) |
Tmin = 0.964, Tmax = 0.971 | Rint = 0.023 |
27454 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 16 restraints |
wR(F2) = 0.176 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.66 e Å−3 |
6218 reflections | Δρmin = −0.45 e Å−3 |
309 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C2 | 0.1929 (2) | 0.26604 (18) | 0.44185 (16) | 0.0459 (4) | |
C3 | 0.2837 (2) | 0.35252 (17) | 0.39343 (15) | 0.0423 (4) | |
C4 | 0.2631 (2) | 0.45572 (17) | 0.46608 (14) | 0.0390 (4) | |
C5 | 0.1556 (2) | 0.43026 (17) | 0.55745 (15) | 0.0399 (4) | |
C6 | 0.1105 (2) | 0.51428 (18) | 0.64167 (15) | 0.0462 (4) | |
H6 | 0.0372 | 0.4979 | 0.7023 | 0.055* | |
C7 | 0.1787 (2) | 0.62274 (19) | 0.63165 (16) | 0.0482 (4) | |
H7 | 0.1523 | 0.6797 | 0.6876 | 0.058* | |
C8 | 0.2861 (2) | 0.64990 (18) | 0.54028 (16) | 0.0442 (4) | |
C9 | 0.3283 (2) | 0.56763 (18) | 0.45571 (15) | 0.0427 (4) | |
H9 | 0.3979 | 0.5861 | 0.3937 | 0.051* | |
C10 | 0.1592 (2) | 0.15262 (18) | 0.70459 (16) | 0.0461 (4) | |
C11 | 0.2091 (3) | 0.0301 (2) | 0.68271 (18) | 0.0550 (5) | |
H11 | 0.1655 | −0.0122 | 0.6342 | 0.066* | |
C12 | 0.3239 (3) | −0.0290 (2) | 0.7332 (2) | 0.0682 (6) | |
H12 | 0.3584 | −0.1117 | 0.7190 | 0.082* | |
C13 | 0.3875 (3) | 0.0341 (3) | 0.8045 (2) | 0.0745 (7) | |
H13 | 0.4654 | −0.0061 | 0.8384 | 0.089* | |
C14 | 0.3377 (4) | 0.1551 (3) | 0.8262 (2) | 0.0756 (7) | |
H14 | 0.3818 | 0.1968 | 0.8749 | 0.091* | |
C15 | 0.2218 (3) | 0.2167 (2) | 0.77638 (19) | 0.0611 (6) | |
H15 | 0.1873 | 0.2993 | 0.7911 | 0.073* | |
C16 | 0.1853 (4) | 0.1390 (2) | 0.4038 (2) | 0.0672 (6) | |
H16A | 0.0883 | 0.1354 | 0.3790 | 0.101* | |
H16B | 0.1924 | 0.0813 | 0.4625 | 0.101* | |
H16C | 0.2704 | 0.1183 | 0.3452 | 0.101* | |
C17 | 0.3945 (2) | 0.34685 (18) | 0.29260 (16) | 0.0465 (4) | |
H17 | 0.4866 | 0.3808 | 0.2952 | 0.056* | |
C18 | 0.3860 (2) | 0.30077 (18) | 0.19641 (16) | 0.0470 (4) | |
C19 | 0.2432 (2) | 0.2538 (2) | 0.17047 (16) | 0.0506 (5) | |
C20 | 0.1390 (3) | 0.0829 (3) | 0.1115 (3) | 0.0788 (8) | |
H20A | 0.1112 | 0.1196 | 0.0452 | 0.095* | |
H20B | 0.0494 | 0.0975 | 0.1693 | 0.095* | |
C21 | 0.1827 (5) | −0.0488 (3) | 0.0973 (3) | 0.1081 (12) | |
H21A | 0.0969 | −0.0865 | 0.0789 | 0.162* | |
H21B | 0.2087 | −0.0846 | 0.1636 | 0.162* | |
H21C | 0.2714 | −0.0625 | 0.0400 | 0.162* | |
C22 | 0.5148 (3) | 0.3041 (2) | 0.10308 (19) | 0.0587 (5) | |
C23 | 0.7754 (4) | 0.3516 (4) | 0.0435 (3) | 0.1053 (13) | |
H23A | 0.7917 | 0.2818 | −0.0051 | 0.126* | |
H23B | 0.8686 | 0.3537 | 0.0748 | 0.126* | |
C24 | 0.7462 (13) | 0.4658 (8) | −0.0169 (9) | 0.136 (4) | 0.527 (13) |
H24A | 0.8345 | 0.4753 | −0.0730 | 0.204* | 0.527 (13) |
H24B | 0.7299 | 0.5346 | 0.0315 | 0.204* | 0.527 (13) |
H24C | 0.6551 | 0.4626 | −0.0491 | 0.204* | 0.527 (13) |
C24' | 0.8132 (13) | 0.4810 (6) | 0.0454 (10) | 0.125 (4) | 0.473 (13) |
H24D | 0.9014 | 0.4925 | −0.0102 | 0.187* | 0.473 (13) |
H24E | 0.8375 | 0.4977 | 0.1150 | 0.187* | 0.473 (13) |
H24F | 0.7251 | 0.5364 | 0.0326 | 0.187* | 0.473 (13) |
C25 | 0.4367 (3) | 0.8015 (2) | 0.4473 (2) | 0.0655 (6) | |
H25A | 0.4678 | 0.8809 | 0.4593 | 0.098* | |
H25B | 0.3789 | 0.8073 | 0.3887 | 0.098* | |
H25C | 0.5277 | 0.7433 | 0.4291 | 0.098* | |
N1 | 0.10926 (19) | 0.31258 (15) | 0.54194 (13) | 0.0450 (4) | |
O1 | −0.07993 (18) | 0.31630 (15) | 0.71397 (14) | 0.0640 (4) | |
O2 | −0.05720 (19) | 0.14123 (16) | 0.59054 (15) | 0.0668 (5) | |
O3 | 0.11914 (19) | 0.31388 (18) | 0.17716 (15) | 0.0703 (5) | |
O4 | 0.27014 (18) | 0.13750 (15) | 0.13834 (14) | 0.0620 (4) | |
O5 | 0.5020 (3) | 0.2806 (3) | 0.01285 (16) | 0.1019 (8) | |
O6 | 0.6431 (2) | 0.3383 (2) | 0.12855 (16) | 0.0883 (7) | |
O7 | 0.34224 (19) | 0.76187 (14) | 0.54229 (13) | 0.0588 (4) | |
S1 | 0.01286 (6) | 0.23002 (5) | 0.64069 (4) | 0.04951 (16) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C2 | 0.0544 (10) | 0.0432 (10) | 0.0434 (9) | −0.0068 (8) | −0.0163 (8) | 0.0002 (8) |
C3 | 0.0455 (9) | 0.0434 (9) | 0.0398 (9) | −0.0034 (7) | −0.0130 (7) | −0.0031 (7) |
C4 | 0.0372 (8) | 0.0437 (9) | 0.0376 (8) | −0.0026 (7) | −0.0115 (7) | −0.0017 (7) |
C5 | 0.0388 (8) | 0.0407 (9) | 0.0412 (9) | −0.0036 (7) | −0.0111 (7) | 0.0038 (7) |
C6 | 0.0467 (10) | 0.0499 (10) | 0.0397 (9) | −0.0027 (8) | −0.0031 (7) | 0.0012 (8) |
C7 | 0.0522 (10) | 0.0478 (10) | 0.0436 (10) | −0.0023 (8) | −0.0064 (8) | −0.0076 (8) |
C8 | 0.0439 (9) | 0.0434 (10) | 0.0473 (10) | −0.0062 (7) | −0.0128 (8) | −0.0022 (8) |
C9 | 0.0397 (8) | 0.0478 (10) | 0.0414 (9) | −0.0075 (7) | −0.0079 (7) | −0.0001 (7) |
C10 | 0.0471 (9) | 0.0492 (10) | 0.0428 (9) | −0.0094 (8) | −0.0088 (8) | 0.0095 (8) |
C11 | 0.0635 (12) | 0.0507 (11) | 0.0528 (11) | −0.0101 (9) | −0.0147 (10) | 0.0068 (9) |
C12 | 0.0740 (15) | 0.0624 (14) | 0.0659 (15) | 0.0076 (12) | −0.0171 (12) | 0.0075 (12) |
C13 | 0.0711 (15) | 0.0868 (14) | 0.0675 (15) | 0.0054 (13) | −0.0279 (13) | 0.0119 (13) |
C14 | 0.0849 (18) | 0.0880 (15) | 0.0622 (14) | −0.0091 (14) | −0.0347 (14) | −0.0049 (13) |
C15 | 0.0748 (15) | 0.0584 (13) | 0.0537 (12) | −0.0061 (11) | −0.0216 (11) | −0.0009 (10) |
C16 | 0.1018 (19) | 0.0461 (11) | 0.0566 (13) | −0.0175 (12) | −0.0155 (13) | −0.0015 (10) |
C17 | 0.0470 (10) | 0.0458 (10) | 0.0471 (10) | −0.0044 (8) | −0.0089 (8) | −0.0051 (8) |
C18 | 0.0461 (10) | 0.0489 (10) | 0.0460 (10) | −0.0036 (8) | −0.0078 (8) | −0.0071 (8) |
C19 | 0.0474 (10) | 0.0630 (12) | 0.0409 (9) | −0.0042 (9) | −0.0062 (8) | −0.0079 (9) |
C20 | 0.0690 (16) | 0.093 (2) | 0.0817 (18) | −0.0299 (14) | −0.0183 (13) | −0.0193 (15) |
C21 | 0.112 (3) | 0.092 (2) | 0.126 (3) | −0.050 (2) | −0.008 (2) | −0.026 (2) |
C22 | 0.0522 (11) | 0.0685 (14) | 0.0543 (12) | −0.0114 (10) | −0.0009 (9) | −0.0172 (10) |
C23 | 0.0772 (19) | 0.128 (3) | 0.105 (2) | −0.044 (2) | 0.0246 (15) | −0.035 (2) |
C24 | 0.135 (4) | 0.136 (4) | 0.136 (4) | −0.0144 (11) | −0.0234 (12) | 0.0001 (10) |
C24' | 0.125 (4) | 0.125 (4) | 0.125 (4) | −0.0152 (11) | −0.0213 (12) | 0.0003 (10) |
C25 | 0.0642 (14) | 0.0622 (14) | 0.0728 (15) | −0.0255 (11) | −0.0089 (11) | 0.0043 (11) |
N1 | 0.0512 (9) | 0.0430 (8) | 0.0429 (8) | −0.0096 (7) | −0.0122 (7) | 0.0052 (6) |
O1 | 0.0498 (8) | 0.0646 (10) | 0.0700 (10) | −0.0029 (7) | 0.0056 (7) | 0.0129 (8) |
O2 | 0.0590 (9) | 0.0645 (10) | 0.0867 (12) | −0.0265 (8) | −0.0296 (8) | 0.0149 (9) |
O3 | 0.0480 (8) | 0.0871 (12) | 0.0744 (11) | 0.0051 (8) | −0.0117 (8) | −0.0208 (9) |
O4 | 0.0545 (8) | 0.0616 (9) | 0.0736 (10) | −0.0097 (7) | −0.0169 (7) | −0.0169 (8) |
O5 | 0.0799 (13) | 0.169 (2) | 0.0583 (11) | −0.0429 (14) | 0.0093 (9) | −0.0447 (13) |
O6 | 0.0620 (11) | 0.1307 (18) | 0.0742 (12) | −0.0402 (11) | 0.0049 (8) | −0.0285 (12) |
O7 | 0.0675 (9) | 0.0513 (8) | 0.0599 (9) | −0.0203 (7) | −0.0080 (7) | −0.0071 (7) |
S1 | 0.0422 (3) | 0.0513 (3) | 0.0567 (3) | −0.0116 (2) | −0.0114 (2) | 0.0123 (2) |
C2—C3 | 1.360 (3) | C17—H17 | 0.93 |
C2—N1 | 1.411 (3) | C18—C22 | 1.475 (3) |
C2—C16 | 1.490 (3) | C18—C19 | 1.493 (3) |
C3—C4 | 1.442 (2) | C19—O3 | 1.196 (3) |
C3—C17 | 1.447 (3) | C19—O4 | 1.324 (3) |
C4—C5 | 1.388 (3) | C20—O4 | 1.445 (3) |
C4—C9 | 1.396 (3) | C20—C21 | 1.452 (5) |
C5—C6 | 1.390 (3) | C20—H20A | 0.97 |
C5—N1 | 1.416 (2) | C20—H20B | 0.97 |
C6—C7 | 1.376 (3) | C21—H21A | 0.96 |
C6—H6 | 0.93 | C21—H21B | 0.96 |
C7—C8 | 1.393 (3) | C21—H21C | 0.96 |
C7—H7 | 0.93 | C22—O5 | 1.193 (3) |
C8—O7 | 1.368 (2) | C22—O6 | 1.316 (3) |
C8—C9 | 1.379 (3) | C23—O6 | 1.445 (3) |
C9—H9 | 0.93 | C23—C24 | 1.461 (5) |
C10—C15 | 1.376 (3) | C23—C24' | 1.486 (5) |
C10—C11 | 1.378 (3) | C23—H23A | 0.97 |
C10—S1 | 1.756 (2) | C23—H23B | 0.97 |
C11—C12 | 1.373 (3) | C24—H24A | 0.96 |
C11—H11 | 0.93 | C24—H24B | 0.96 |
C12—C13 | 1.370 (4) | C24—H24C | 0.96 |
C12—H12 | 0.93 | C24'—H24D | 0.96 |
C13—C14 | 1.362 (4) | C24'—H24E | 0.96 |
C13—H13 | 0.93 | C24'—H24F | 0.96 |
C14—C15 | 1.386 (3) | C25—O7 | 1.409 (3) |
C14—H14 | 0.93 | C25—H25A | 0.96 |
C15—H15 | 0.93 | C25—H25B | 0.96 |
C16—H16A | 0.96 | C25—H25C | 0.96 |
C16—H16B | 0.96 | N1—S1 | 1.6690 (16) |
C16—H16C | 0.96 | O1—S1 | 1.4141 (17) |
C17—C18 | 1.335 (3) | O2—S1 | 1.4181 (17) |
C3—C2—N1 | 108.67 (16) | O4—C19—C18 | 111.98 (17) |
C3—C2—C16 | 128.0 (2) | O4—C20—C21 | 108.4 (3) |
N1—C2—C16 | 123.20 (19) | O4—C20—H20A | 110.0 |
C2—C3—C4 | 107.82 (17) | C21—C20—H20A | 110.0 |
C2—C3—C17 | 129.75 (18) | O4—C20—H20B | 110.0 |
C4—C3—C17 | 122.24 (17) | C21—C20—H20B | 110.0 |
C5—C4—C9 | 120.75 (17) | H20A—C20—H20B | 108.4 |
C5—C4—C3 | 108.18 (16) | C20—C21—H21A | 109.5 |
C9—C4—C3 | 131.05 (17) | C20—C21—H21B | 109.5 |
C4—C5—C6 | 121.34 (17) | H21A—C21—H21B | 109.5 |
C4—C5—N1 | 106.95 (16) | C20—C21—H21C | 109.5 |
C6—C5—N1 | 131.70 (17) | H21A—C21—H21C | 109.5 |
C7—C6—C5 | 117.28 (18) | H21B—C21—H21C | 109.5 |
C7—C6—H6 | 121.4 | O5—C22—O6 | 123.5 (2) |
C5—C6—H6 | 121.4 | O5—C22—C18 | 122.8 (2) |
C6—C7—C8 | 122.06 (18) | O6—C22—C18 | 113.66 (19) |
C6—C7—H7 | 119.0 | O6—C23—C24 | 109.3 (5) |
C8—C7—H7 | 119.0 | O6—C23—C24' | 107.6 (5) |
O7—C8—C9 | 124.44 (18) | O6—C23—H23A | 109.8 |
O7—C8—C7 | 114.95 (17) | C24—C23—H23A | 109.8 |
C9—C8—C7 | 120.60 (18) | C24'—C23—H23A | 140.2 |
C8—C9—C4 | 117.94 (17) | O6—C23—H23B | 109.8 |
C8—C9—H9 | 121.0 | C24—C23—H23B | 109.8 |
C4—C9—H9 | 121.0 | C24'—C23—H23B | 70.5 |
C15—C10—C11 | 121.2 (2) | H23A—C23—H23B | 108.3 |
C15—C10—S1 | 118.66 (17) | C23—C24—H24A | 109.5 |
C11—C10—S1 | 120.13 (16) | C23—C24—H24B | 109.5 |
C12—C11—C10 | 119.4 (2) | H24A—C24—H24B | 109.5 |
C12—C11—H11 | 120.3 | C23—C24—H24C | 109.5 |
C10—C11—H11 | 120.3 | H24A—C24—H24C | 109.5 |
C13—C12—C11 | 119.9 (2) | H24B—C24—H24C | 109.5 |
C13—C12—H12 | 120.1 | C23—C24'—H24D | 109.5 |
C11—C12—H12 | 120.1 | C23—C24'—H24E | 109.5 |
C14—C13—C12 | 120.7 (2) | H24D—C24'—H24E | 109.5 |
C14—C13—H13 | 119.7 | C23—C24'—H24F | 109.5 |
C12—C13—H13 | 119.7 | H24D—C24'—H24F | 109.5 |
C13—C14—C15 | 120.5 (2) | H24E—C24'—H24F | 109.5 |
C13—C14—H14 | 119.7 | O7—C25—H25A | 109.5 |
C15—C14—H14 | 119.7 | O7—C25—H25B | 109.5 |
C10—C15—C14 | 118.3 (2) | H25A—C25—H25B | 109.5 |
C10—C15—H15 | 120.8 | O7—C25—H25C | 109.5 |
C14—C15—H15 | 120.8 | H25A—C25—H25C | 109.5 |
C2—C16—H16A | 109.5 | H25B—C25—H25C | 109.5 |
C2—C16—H16B | 109.5 | C2—N1—C5 | 108.32 (15) |
H16A—C16—H16B | 109.5 | C2—N1—S1 | 125.65 (13) |
C2—C16—H16C | 109.5 | C5—N1—S1 | 123.91 (13) |
H16A—C16—H16C | 109.5 | C19—O4—C20 | 116.42 (19) |
H16B—C16—H16C | 109.5 | C22—O6—C23 | 119.1 (2) |
C18—C17—C3 | 130.42 (19) | C8—O7—C25 | 117.79 (17) |
C18—C17—H17 | 114.8 | O1—S1—O2 | 120.42 (11) |
C3—C17—H17 | 114.8 | O1—S1—N1 | 106.20 (9) |
C17—C18—C22 | 121.49 (19) | O2—S1—N1 | 107.38 (10) |
C17—C18—C19 | 123.87 (18) | O1—S1—C10 | 108.77 (10) |
C22—C18—C19 | 114.37 (17) | O2—S1—C10 | 108.50 (10) |
O3—C19—O4 | 123.8 (2) | N1—S1—C10 | 104.43 (9) |
O3—C19—C18 | 124.2 (2) | ||
N1—C2—C3—C4 | 2.4 (2) | C17—C18—C19—O4 | −122.7 (2) |
C16—C2—C3—C4 | −173.8 (2) | C22—C18—C19—O4 | 63.2 (2) |
N1—C2—C3—C17 | 177.27 (18) | C17—C18—C22—O5 | −168.7 (3) |
C16—C2—C3—C17 | 1.0 (3) | C19—C18—C22—O5 | 5.6 (4) |
C2—C3—C4—C5 | −1.4 (2) | C17—C18—C22—O6 | 9.7 (3) |
C17—C3—C4—C5 | −176.76 (16) | C19—C18—C22—O6 | −176.0 (2) |
C2—C3—C4—C9 | −179.75 (18) | C3—C2—N1—C5 | −2.5 (2) |
C17—C3—C4—C9 | 4.9 (3) | C16—C2—N1—C5 | 173.94 (19) |
C9—C4—C5—C6 | −0.6 (3) | C3—C2—N1—S1 | −166.42 (13) |
C3—C4—C5—C6 | −179.14 (16) | C16—C2—N1—S1 | 10.0 (3) |
C9—C4—C5—N1 | 178.41 (15) | C4—C5—N1—C2 | 1.58 (19) |
C3—C4—C5—N1 | −0.13 (19) | C6—C5—N1—C2 | −179.56 (19) |
C4—C5—C6—C7 | −1.1 (3) | C4—C5—N1—S1 | 165.83 (13) |
N1—C5—C6—C7 | −179.83 (18) | C6—C5—N1—S1 | −15.3 (3) |
C5—C6—C7—C8 | 1.4 (3) | O3—C19—O4—C20 | −0.6 (3) |
C6—C7—C8—O7 | 179.45 (18) | C18—C19—O4—C20 | 179.8 (2) |
C6—C7—C8—C9 | 0.0 (3) | C21—C20—O4—C19 | −169.9 (3) |
O7—C8—C9—C4 | 178.90 (17) | O5—C22—O6—C23 | 1.6 (5) |
C7—C8—C9—C4 | −1.7 (3) | C18—C22—O6—C23 | −176.8 (3) |
C5—C4—C9—C8 | 2.0 (3) | C24—C23—O6—C22 | 75.7 (6) |
C3—C4—C9—C8 | −179.87 (18) | C24'—C23—O6—C22 | 121.2 (6) |
C15—C10—C11—C12 | −0.2 (3) | C9—C8—O7—C25 | 6.9 (3) |
S1—C10—C11—C12 | 179.85 (18) | C7—C8—O7—C25 | −172.56 (19) |
C10—C11—C12—C13 | 0.0 (4) | C2—N1—S1—O1 | −167.59 (16) |
C11—C12—C13—C14 | 0.2 (4) | C5—N1—S1—O1 | 30.90 (18) |
C12—C13—C14—C15 | −0.1 (5) | C2—N1—S1—O2 | −37.54 (18) |
C11—C10—C15—C14 | 0.3 (4) | C5—N1—S1—O2 | 160.94 (15) |
S1—C10—C15—C14 | −179.8 (2) | C2—N1—S1—C10 | 77.54 (17) |
C13—C14—C15—C10 | −0.1 (4) | C5—N1—S1—C10 | −83.98 (16) |
C2—C3—C17—C18 | 41.7 (3) | C15—C10—S1—O1 | −34.6 (2) |
C4—C3—C17—C18 | −144.1 (2) | C11—C10—S1—O1 | 145.35 (17) |
C3—C17—C18—C22 | −179.7 (2) | C15—C10—S1—O2 | −167.21 (18) |
C3—C17—C18—C19 | 6.6 (4) | C11—C10—S1—O2 | 12.7 (2) |
C17—C18—C19—O3 | 57.7 (3) | C15—C10—S1—N1 | 78.50 (19) |
C22—C18—C19—O3 | −116.4 (2) | C11—C10—S1—N1 | −101.59 (18) |
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O1 | 0.93 | 2.32 | 2.901 (3) | 120 |
C14—H14···O5i | 0.93 | 2.42 | 3.349 (3) | 173 |
C25—H25C···Cg1ii | 0.96 | 2.92 | 3.515 (3) | 140 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C24H25NO7S |
Mr | 471.51 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 8.7597 (2), 10.9029 (2), 12.5186 (3) |
α, β, γ (°) | 88.402 (1), 79.723 (1), 83.635 (2) |
V (Å3) | 1169.13 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.18 |
Crystal size (mm) | 0.22 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Bruker Kappa-APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2001) |
Tmin, Tmax | 0.964, 0.971 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 27454, 6218, 4628 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.684 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.176, 1.07 |
No. of reflections | 6218 |
No. of parameters | 309 |
No. of restraints | 16 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.66, −0.45 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C6—H6···O1 | 0.93 | 2.32 | 2.901 (3) | 120 |
C14—H14···O5i | 0.93 | 2.42 | 3.349 (3) | 173 |
C25—H25C···Cg1ii | 0.96 | 2.92 | 3.515 (3) | 140 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1, −y+1, −z+1. |
Acknowledgements
TK thanks Dr Babu Varghese, SAIF, IIT-Madras, Chennai, India, for his help with the data collection.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Indoles form an integral part of many natural products and possess potentially reactive sites to perform variety of chemical reactions to generate molecular diversity (Farhanullah et al., 2004). Many of the indole derivatives are found to possess antibacterial (Okabe & Adachi, 1998), antitumour (Schollmeyer et al., 1995) and antimicrobial (El-Sayed et al., 1986) activities.
The bond angles around atom S1 show significant deviation from regular tetrahedral geometry. The widening of O1—S1—O2 [120.42 (11)°] and the narrowing of the angle N1—S1—C10 [104.43 (9)°] are attributed to the Thorpe-Ingold effect (Bassindale, 1984). The indole ring system is planar. The bond lengths and angles are comparable to those observed in a related structure (Chakkaravarthi et al., 2008). The sum of bond angles around atom N1 (357.9°) indicates that the atom N1 is in sp2 hybridized state (Beddoes et al., 1986). The sulfonyl bound phenyl ring (C10–C15) is approximately perpendicular to the indole ring system, with the dihedral angle being 87.72 (5)°. The C18–C21/O3/O4 ester group shows an extended conformation, as is evident from the torsion angles C18—C19—O4—C20 = 179.8 (2)° and C19—O4—C20—C21 = -169.9 (3)°. The terminal methyl group of the other ester group is disordered over two positions. An intramolecular C6—H6···O1 hydrogen bond is observed.
In the crystal structure, the molecules are linked into a zigzag C(12) chain running along the c axis by intermolecular C—H···O hydrogen bonds involving atoms C14 and O5 (Table 1). The inversion-related molecules of adjacent chains are linked via weak C—H···π interactions involving the N1/C2–C5 ring (centroid Cg1) to form a ribbon structure (Fig. 2).