organic compounds
2,6-Bis(2-hydroxyethyl)-8b,8c-diphenylperhydro-2,3a,4a,6,7a,8a-hexaazacyclopenta[def]fluorene-4,8-dithione
aKey Laboratory of Pesticide and Chemical Biology of the Ministry of Education, College of Chemistry, Central China Normal University, Wuhan 430079, People's Republic of China, and b6th Department, Research Institute of Chemical Defence, Beijing 102205, People's Republic of China
*Correspondence e-mail: wangzihua@mails.ccnu.edu.cn
In the title molecule, C24H28N6O2S2, the dihedral angle between the aromatic ring planes is 42.2 (1)°. In the the hydroxy groups are involved in O—H⋯S hydrogen bonding, which links the molecules into corrugated layers propagating parallel to the bc plane.
Related literature
For the preparation of the title compound, see: Li et al. (2006); Broan et al. (1989). For general background regarding glycoluril and its derivatives, see Gao et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809019230/cv2558sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809019230/cv2558Isup2.hkl
The title compound was synthesized according to the procedure reported (Broan et al., 1989; Li et al., 2006). Crystals appropriate for X-ray data collection were obtained by slow evaporation of the dichloromethane solution at 293 K.
C-bound H atoms were positioned in geometrically idealized positions and constrained to ride on their parent atoms, with C—H distances in the range 0.93–0.97 Å and Uiso(H) = 1.2Ueq(C) or Uiso(H) = 1.5Ueq(C). The hydroxyl H atoms were found from the Fourier difference map and refined with the bond restraint O—H = 0.82 (2) Å, and Uiso(H) = 1.5Ueq(O).
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. |
C24H28N6O2S2 | F(000) = 1048 |
Mr = 496.64 | Dx = 1.373 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7811 reflections |
a = 10.8207 (3) Å | θ = 2.6–26.8° |
b = 11.9259 (3) Å | µ = 0.26 mm−1 |
c = 18.7222 (5) Å | T = 295 K |
β = 95.917 (1)° | Block, colorless |
V = 2403.16 (11) Å3 | 0.30 × 0.20 × 0.10 mm |
Z = 4 |
Bruker SMART APEX CCD area-detector diffractometer | 5248 independent reflections |
Radiation source: fine-focus sealed tube | 3908 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.048 |
ϕ and ω scans | θmax = 27.0°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick,1996) | h = −13→13 |
Tmin = 0.927, Tmax = 0.975 | k = −15→14 |
26638 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.141 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.086P)2] where P = (Fo2 + 2Fc2)/3 |
5248 reflections | (Δ/σ)max < 0.001 |
313 parameters | Δρmax = 0.43 e Å−3 |
2 restraints | Δρmin = −0.31 e Å−3 |
C24H28N6O2S2 | V = 2403.16 (11) Å3 |
Mr = 496.64 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.8207 (3) Å | µ = 0.26 mm−1 |
b = 11.9259 (3) Å | T = 295 K |
c = 18.7222 (5) Å | 0.30 × 0.20 × 0.10 mm |
β = 95.917 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 5248 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick,1996) | 3908 reflections with I > 2σ(I) |
Tmin = 0.927, Tmax = 0.975 | Rint = 0.048 |
26638 measured reflections |
R[F2 > 2σ(F2)] = 0.049 | 2 restraints |
wR(F2) = 0.141 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.43 e Å−3 |
5248 reflections | Δρmin = −0.31 e Å−3 |
313 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | −0.12009 (19) | 0.06722 (19) | 0.17347 (12) | 0.0556 (6) | |
H1A | −0.1247 | 0.1295 | 0.2064 | 0.067* | |
H1B | −0.1835 | 0.0784 | 0.1336 | 0.067* | |
C2 | 0.00508 (18) | 0.06743 (18) | 0.14581 (10) | 0.0468 (5) | |
H2A | 0.0141 | 0.0001 | 0.1177 | 0.056* | |
H2B | 0.0113 | 0.1316 | 0.1146 | 0.056* | |
C3 | 0.22092 (19) | 0.02137 (15) | 0.18881 (10) | 0.0423 (5) | |
H3A | 0.2027 | −0.0508 | 0.1663 | 0.051* | |
H3B | 0.2735 | 0.0084 | 0.2332 | 0.051* | |
C4 | 0.12806 (17) | 0.18506 (15) | 0.23345 (9) | 0.0389 (4) | |
H4A | 0.1770 | 0.1812 | 0.2798 | 0.047* | |
H4B | 0.0491 | 0.2199 | 0.2403 | 0.047* | |
C5 | 0.27962 (17) | 0.08201 (15) | 0.06750 (10) | 0.0376 (4) | |
C6 | 0.14142 (15) | 0.32561 (14) | 0.13366 (9) | 0.0322 (4) | |
C7 | 0.31088 (15) | 0.20650 (13) | 0.16475 (9) | 0.0302 (4) | |
C8 | 0.41469 (15) | 0.21794 (15) | 0.22511 (9) | 0.0350 (4) | |
C9 | 0.51836 (17) | 0.14859 (17) | 0.22663 (11) | 0.0459 (5) | |
H9 | 0.5209 | 0.0914 | 0.1930 | 0.055* | |
C10 | 0.61795 (18) | 0.1651 (2) | 0.27853 (13) | 0.0579 (6) | |
H10 | 0.6882 | 0.1201 | 0.2790 | 0.070* | |
C11 | 0.6129 (2) | 0.2475 (2) | 0.32904 (13) | 0.0617 (6) | |
H11 | 0.6794 | 0.2575 | 0.3641 | 0.074* | |
C12 | 0.5107 (2) | 0.31542 (19) | 0.32845 (12) | 0.0566 (6) | |
H12 | 0.5079 | 0.3709 | 0.3632 | 0.068* | |
C13 | 0.41094 (18) | 0.30164 (16) | 0.27611 (10) | 0.0428 (4) | |
H13 | 0.3420 | 0.3484 | 0.2754 | 0.051* | |
C14 | 0.32978 (15) | 0.26964 (13) | 0.09338 (9) | 0.0318 (4) | |
C15 | 0.45229 (15) | 0.33084 (15) | 0.09195 (9) | 0.0354 (4) | |
C16 | 0.55620 (18) | 0.27555 (18) | 0.07309 (12) | 0.0510 (5) | |
H16 | 0.5494 | 0.2025 | 0.0557 | 0.061* | |
C17 | 0.67082 (19) | 0.3290 (2) | 0.08007 (13) | 0.0599 (6) | |
H17 | 0.7408 | 0.2914 | 0.0676 | 0.072* | |
C18 | 0.68142 (19) | 0.4367 (2) | 0.10520 (13) | 0.0577 (6) | |
H18 | 0.7589 | 0.4712 | 0.1107 | 0.069* | |
C19 | 0.5778 (2) | 0.49443 (19) | 0.12239 (12) | 0.0523 (5) | |
H19 | 0.5848 | 0.5682 | 0.1384 | 0.063* | |
C20 | 0.46311 (17) | 0.44085 (16) | 0.11538 (11) | 0.0441 (5) | |
H20 | 0.3929 | 0.4793 | 0.1266 | 0.053* | |
C21 | 0.28287 (19) | 0.22150 (17) | −0.03467 (10) | 0.0464 (5) | |
H21A | 0.3540 | 0.2611 | −0.0498 | 0.056* | |
H21B | 0.2662 | 0.1576 | −0.0663 | 0.056* | |
C22 | 0.19164 (19) | 0.38613 (15) | 0.01067 (11) | 0.0428 (5) | |
H22A | 0.1156 | 0.4296 | 0.0086 | 0.051* | |
H22B | 0.2573 | 0.4354 | −0.0019 | 0.051* | |
C23 | 0.0576 (2) | 0.23381 (17) | −0.04220 (12) | 0.0537 (6) | |
H23A | 0.0491 | 0.2073 | 0.0060 | 0.064* | |
H23B | 0.0610 | 0.1686 | −0.0729 | 0.064* | |
C24 | −0.0547 (2) | 0.3012 (2) | −0.06773 (14) | 0.0681 (7) | |
H24A | −0.1281 | 0.2574 | −0.0610 | 0.082* | |
H24B | −0.0563 | 0.3676 | −0.0379 | 0.082* | |
N1 | 0.10632 (14) | 0.07216 (13) | 0.20529 (8) | 0.0414 (4) | |
N2 | 0.28966 (13) | 0.09106 (11) | 0.14054 (8) | 0.0342 (3) | |
N3 | 0.19398 (12) | 0.25404 (12) | 0.18405 (7) | 0.0319 (3) | |
N4 | 0.31342 (14) | 0.18107 (12) | 0.03940 (8) | 0.0373 (4) | |
N5 | 0.22274 (13) | 0.34526 (12) | 0.08454 (8) | 0.0333 (3) | |
N6 | 0.17545 (15) | 0.29589 (13) | −0.04166 (8) | 0.0453 (4) | |
O1 | −0.14482 (17) | −0.03208 (18) | 0.20862 (11) | 0.0846 (6) | |
H1 | −0.087 (2) | −0.045 (3) | 0.2388 (15) | 0.127* | |
O2 | −0.0615 (2) | 0.33480 (17) | −0.13943 (11) | 0.0862 (6) | |
H2 | −0.033 (3) | 0.3995 (15) | −0.1335 (19) | 0.129* | |
S1 | 0.24080 (7) | −0.03339 (4) | 0.02083 (3) | 0.0601 (2) | |
S2 | 0.00120 (4) | 0.38457 (5) | 0.13406 (3) | 0.04925 (17) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0446 (12) | 0.0720 (15) | 0.0484 (13) | −0.0162 (11) | −0.0034 (10) | 0.0076 (11) |
C2 | 0.0515 (12) | 0.0500 (12) | 0.0384 (11) | −0.0192 (9) | 0.0022 (9) | −0.0006 (9) |
C3 | 0.0530 (11) | 0.0342 (10) | 0.0391 (11) | −0.0063 (8) | 0.0023 (9) | 0.0039 (8) |
C4 | 0.0369 (10) | 0.0488 (11) | 0.0313 (10) | −0.0088 (8) | 0.0051 (8) | −0.0008 (8) |
C5 | 0.0393 (10) | 0.0346 (9) | 0.0388 (11) | 0.0028 (8) | 0.0031 (8) | −0.0017 (8) |
C6 | 0.0281 (8) | 0.0316 (9) | 0.0361 (10) | −0.0041 (7) | −0.0006 (7) | −0.0059 (7) |
C7 | 0.0279 (8) | 0.0303 (8) | 0.0323 (9) | 0.0002 (6) | 0.0028 (7) | −0.0009 (7) |
C8 | 0.0301 (9) | 0.0389 (10) | 0.0354 (10) | −0.0043 (7) | 0.0008 (7) | 0.0055 (8) |
C9 | 0.0360 (10) | 0.0533 (12) | 0.0481 (12) | 0.0027 (9) | 0.0033 (9) | 0.0075 (9) |
C10 | 0.0316 (10) | 0.0721 (15) | 0.0688 (16) | 0.0026 (10) | −0.0008 (10) | 0.0249 (13) |
C11 | 0.0438 (13) | 0.0765 (16) | 0.0600 (15) | −0.0198 (11) | −0.0178 (11) | 0.0157 (13) |
C12 | 0.0595 (14) | 0.0585 (13) | 0.0485 (13) | −0.0183 (11) | −0.0109 (10) | −0.0011 (10) |
C13 | 0.0429 (10) | 0.0417 (10) | 0.0422 (11) | −0.0050 (8) | −0.0029 (8) | −0.0009 (8) |
C14 | 0.0312 (9) | 0.0308 (9) | 0.0334 (9) | 0.0007 (7) | 0.0041 (7) | −0.0024 (7) |
C15 | 0.0308 (9) | 0.0414 (10) | 0.0345 (10) | −0.0021 (7) | 0.0062 (7) | 0.0051 (8) |
C16 | 0.0398 (11) | 0.0517 (12) | 0.0636 (14) | 0.0056 (9) | 0.0155 (10) | 0.0069 (10) |
C17 | 0.0328 (11) | 0.0704 (15) | 0.0789 (17) | 0.0057 (10) | 0.0174 (10) | 0.0173 (13) |
C18 | 0.0323 (10) | 0.0753 (16) | 0.0647 (15) | −0.0137 (10) | 0.0008 (10) | 0.0233 (12) |
C19 | 0.0448 (11) | 0.0550 (12) | 0.0564 (13) | −0.0150 (10) | 0.0016 (9) | 0.0039 (10) |
C20 | 0.0344 (10) | 0.0466 (11) | 0.0513 (12) | −0.0054 (8) | 0.0050 (8) | −0.0008 (9) |
C21 | 0.0574 (13) | 0.0478 (11) | 0.0348 (11) | −0.0032 (9) | 0.0079 (9) | −0.0012 (9) |
C22 | 0.0426 (10) | 0.0369 (10) | 0.0479 (12) | −0.0023 (8) | −0.0005 (9) | 0.0099 (9) |
C23 | 0.0595 (14) | 0.0503 (12) | 0.0481 (13) | −0.0145 (10) | −0.0098 (10) | 0.0072 (10) |
C24 | 0.0584 (15) | 0.0822 (17) | 0.0611 (16) | −0.0197 (13) | −0.0068 (12) | 0.0089 (13) |
N1 | 0.0435 (9) | 0.0430 (9) | 0.0375 (9) | −0.0118 (7) | 0.0032 (7) | 0.0011 (7) |
N2 | 0.0400 (8) | 0.0283 (7) | 0.0341 (8) | −0.0022 (6) | 0.0027 (6) | −0.0023 (6) |
N3 | 0.0258 (7) | 0.0364 (8) | 0.0337 (8) | −0.0021 (6) | 0.0043 (6) | −0.0027 (6) |
N4 | 0.0446 (9) | 0.0356 (8) | 0.0323 (8) | −0.0011 (7) | 0.0062 (7) | −0.0035 (6) |
N5 | 0.0281 (7) | 0.0341 (8) | 0.0374 (8) | 0.0006 (6) | 0.0011 (6) | 0.0034 (6) |
N6 | 0.0508 (10) | 0.0446 (9) | 0.0390 (9) | −0.0074 (7) | −0.0022 (7) | 0.0054 (7) |
O1 | 0.0646 (12) | 0.1027 (14) | 0.0842 (14) | −0.0396 (11) | −0.0034 (9) | 0.0390 (11) |
O2 | 0.0899 (14) | 0.0982 (15) | 0.0647 (12) | −0.0084 (12) | −0.0198 (10) | 0.0193 (11) |
S1 | 0.0926 (5) | 0.0386 (3) | 0.0479 (4) | −0.0061 (3) | 0.0013 (3) | −0.0121 (2) |
S2 | 0.0294 (3) | 0.0545 (3) | 0.0636 (4) | 0.0086 (2) | 0.0036 (2) | −0.0030 (3) |
C1—O1 | 1.394 (3) | C12—H12 | 0.9300 |
C1—C2 | 1.499 (3) | C13—H13 | 0.9300 |
C1—H1A | 0.9700 | C14—N4 | 1.460 (2) |
C1—H1B | 0.9700 | C14—N5 | 1.464 (2) |
C2—N1 | 1.481 (3) | C14—C15 | 1.516 (2) |
C2—H2A | 0.9700 | C15—C16 | 1.380 (2) |
C2—H2B | 0.9700 | C15—C20 | 1.384 (3) |
C3—N1 | 1.442 (2) | C16—C17 | 1.388 (3) |
C3—N2 | 1.483 (2) | C16—H16 | 0.9300 |
C3—H3A | 0.9700 | C17—C18 | 1.369 (3) |
C3—H3B | 0.9700 | C17—H17 | 0.9300 |
C4—N1 | 1.456 (2) | C18—C19 | 1.381 (3) |
C4—N3 | 1.476 (2) | C18—H18 | 0.9300 |
C4—H4A | 0.9700 | C19—C20 | 1.390 (3) |
C4—H4B | 0.9700 | C19—H19 | 0.9300 |
C5—N4 | 1.359 (2) | C20—H20 | 0.9300 |
C5—N2 | 1.365 (2) | C21—N6 | 1.457 (2) |
C5—S1 | 1.6609 (19) | C21—N4 | 1.473 (2) |
C6—N3 | 1.353 (2) | C21—H21A | 0.9700 |
C6—N5 | 1.357 (2) | C21—H21B | 0.9700 |
C6—S2 | 1.6730 (17) | C22—N6 | 1.454 (2) |
C7—N2 | 1.460 (2) | C22—N5 | 1.472 (2) |
C7—N3 | 1.465 (2) | C22—H22A | 0.9700 |
C7—C8 | 1.515 (2) | C22—H22B | 0.9700 |
C7—C14 | 1.565 (2) | C23—N6 | 1.474 (2) |
C8—C13 | 1.385 (3) | C23—C24 | 1.494 (3) |
C8—C9 | 1.392 (3) | C23—H23A | 0.9700 |
C9—C10 | 1.389 (3) | C23—H23B | 0.9700 |
C9—H9 | 0.9300 | C24—O2 | 1.395 (3) |
C10—C11 | 1.369 (3) | C24—H24A | 0.9700 |
C10—H10 | 0.9300 | C24—H24B | 0.9700 |
C11—C12 | 1.370 (3) | O1—H1 | 0.81 (2) |
C11—H11 | 0.9300 | O2—H2 | 0.83 (2) |
C12—C13 | 1.390 (3) | ||
O1—C1—C2 | 112.9 (2) | C16—C15—C14 | 120.75 (16) |
O1—C1—H1A | 109.0 | C20—C15—C14 | 119.75 (15) |
C2—C1—H1A | 109.0 | C15—C16—C17 | 120.0 (2) |
O1—C1—H1B | 109.0 | C15—C16—H16 | 120.0 |
C2—C1—H1B | 109.0 | C17—C16—H16 | 120.0 |
H1A—C1—H1B | 107.8 | C18—C17—C16 | 120.3 (2) |
N1—C2—C1 | 111.41 (16) | C18—C17—H17 | 119.8 |
N1—C2—H2A | 109.3 | C16—C17—H17 | 119.8 |
C1—C2—H2A | 109.3 | C17—C18—C19 | 120.44 (19) |
N1—C2—H2B | 109.3 | C17—C18—H18 | 119.8 |
C1—C2—H2B | 109.3 | C19—C18—H18 | 119.8 |
H2A—C2—H2B | 108.0 | C18—C19—C20 | 119.1 (2) |
N1—C3—N2 | 113.05 (14) | C18—C19—H19 | 120.4 |
N1—C3—H3A | 109.0 | C20—C19—H19 | 120.4 |
N2—C3—H3A | 109.0 | C15—C20—C19 | 120.72 (19) |
N1—C3—H3B | 109.0 | C15—C20—H20 | 119.6 |
N2—C3—H3B | 109.0 | C19—C20—H20 | 119.6 |
H3A—C3—H3B | 107.8 | N6—C21—N4 | 112.54 (15) |
N1—C4—N3 | 111.04 (13) | N6—C21—H21A | 109.1 |
N1—C4—H4A | 109.4 | N4—C21—H21A | 109.1 |
N3—C4—H4A | 109.4 | N6—C21—H21B | 109.1 |
N1—C4—H4B | 109.4 | N4—C21—H21B | 109.1 |
N3—C4—H4B | 109.4 | H21A—C21—H21B | 107.8 |
H4A—C4—H4B | 108.0 | N6—C22—N5 | 112.82 (14) |
N4—C5—N2 | 108.81 (15) | N6—C22—H22A | 109.0 |
N4—C5—S1 | 125.48 (14) | N5—C22—H22A | 109.0 |
N2—C5—S1 | 125.61 (14) | N6—C22—H22B | 109.0 |
N3—C6—N5 | 109.03 (14) | N5—C22—H22B | 109.0 |
N3—C6—S2 | 125.32 (13) | H22A—C22—H22B | 107.8 |
N5—C6—S2 | 125.60 (13) | N6—C23—C24 | 113.98 (18) |
N2—C7—N3 | 109.23 (13) | N6—C23—H23A | 108.8 |
N2—C7—C8 | 113.40 (14) | C24—C23—H23A | 108.8 |
N3—C7—C8 | 111.95 (13) | N6—C23—H23B | 108.8 |
N2—C7—C14 | 102.63 (13) | C24—C23—H23B | 108.8 |
N3—C7—C14 | 102.50 (13) | H23A—C23—H23B | 107.7 |
C8—C7—C14 | 116.19 (13) | O2—C24—C23 | 115.0 (2) |
C13—C8—C9 | 119.68 (17) | O2—C24—H24A | 108.5 |
C13—C8—C7 | 120.47 (16) | C23—C24—H24A | 108.5 |
C9—C8—C7 | 119.72 (16) | O2—C24—H24B | 108.5 |
C10—C9—C8 | 119.7 (2) | C23—C24—H24B | 108.5 |
C10—C9—H9 | 120.1 | H24A—C24—H24B | 107.5 |
C8—C9—H9 | 120.1 | C3—N1—C4 | 110.83 (14) |
C11—C10—C9 | 120.1 (2) | C3—N1—C2 | 114.15 (15) |
C11—C10—H10 | 119.9 | C4—N1—C2 | 112.76 (15) |
C9—C10—H10 | 119.9 | C5—N2—C7 | 112.29 (14) |
C10—C11—C12 | 120.6 (2) | C5—N2—C3 | 124.97 (15) |
C10—C11—H11 | 119.7 | C7—N2—C3 | 114.32 (13) |
C12—C11—H11 | 119.7 | C6—N3—C7 | 112.56 (13) |
C11—C12—C13 | 120.2 (2) | C6—N3—C4 | 126.37 (14) |
C11—C12—H12 | 119.9 | C7—N3—C4 | 115.11 (13) |
C13—C12—H12 | 119.9 | C5—N4—C14 | 112.29 (14) |
C8—C13—C12 | 119.69 (19) | C5—N4—C21 | 127.29 (15) |
C8—C13—H13 | 120.2 | C14—N4—C21 | 114.47 (14) |
C12—C13—H13 | 120.2 | C6—N5—C14 | 112.19 (14) |
N4—C14—N5 | 109.23 (14) | C6—N5—C22 | 126.32 (14) |
N4—C14—C15 | 112.33 (13) | C14—N5—C22 | 114.32 (14) |
N5—C14—C15 | 112.61 (13) | C22—N6—C21 | 110.52 (15) |
N4—C14—C7 | 103.04 (13) | C22—N6—C23 | 114.88 (16) |
N5—C14—C7 | 102.79 (12) | C21—N6—C23 | 112.11 (16) |
C15—C14—C7 | 115.99 (14) | C1—O1—H1 | 108 (3) |
C16—C15—C20 | 119.29 (17) | C24—O2—H2 | 99 (3) |
O1—C1—C2—N1 | −69.4 (2) | C8—C7—N2—C5 | −133.09 (15) |
N2—C7—C8—C13 | −148.92 (15) | C14—C7—N2—C5 | −6.95 (17) |
N3—C7—C8—C13 | −24.8 (2) | N3—C7—N2—C3 | −48.59 (19) |
C14—C7—C8—C13 | 92.50 (19) | C8—C7—N2—C3 | 77.02 (18) |
N2—C7—C8—C9 | 35.3 (2) | C14—C7—N2—C3 | −156.84 (14) |
N3—C7—C8—C9 | 159.47 (15) | N1—C3—N2—C5 | −93.2 (2) |
C14—C7—C8—C9 | −83.3 (2) | N1—C3—N2—C7 | 52.3 (2) |
C13—C8—C9—C10 | −1.1 (3) | N5—C6—N3—C7 | −9.10 (19) |
C7—C8—C9—C10 | 174.74 (17) | S2—C6—N3—C7 | 173.37 (12) |
C8—C9—C10—C11 | 1.6 (3) | N5—C6—N3—C4 | −160.35 (15) |
C9—C10—C11—C12 | −0.9 (3) | S2—C6—N3—C4 | 22.1 (2) |
C10—C11—C12—C13 | −0.4 (3) | N2—C7—N3—C6 | −103.97 (15) |
C9—C8—C13—C12 | −0.2 (3) | C8—C7—N3—C6 | 129.58 (15) |
C7—C8—C13—C12 | −175.92 (17) | C14—C7—N3—C6 | 4.36 (17) |
C11—C12—C13—C8 | 0.9 (3) | N2—C7—N3—C4 | 50.70 (18) |
N2—C7—C14—N4 | 1.33 (15) | C8—C7—N3—C4 | −75.75 (17) |
N3—C7—C14—N4 | −111.96 (13) | C14—C7—N3—C4 | 159.04 (13) |
C8—C7—C14—N4 | 125.65 (15) | N1—C4—N3—C6 | 95.90 (19) |
N2—C7—C14—N5 | 114.86 (13) | N1—C4—N3—C7 | −54.72 (19) |
N3—C7—C14—N5 | 1.57 (15) | N2—C5—N4—C14 | −9.2 (2) |
C8—C7—C14—N5 | −120.81 (15) | S1—C5—N4—C14 | 174.18 (13) |
N2—C7—C14—C15 | −121.82 (15) | N2—C5—N4—C21 | −160.26 (16) |
N3—C7—C14—C15 | 124.89 (14) | S1—C5—N4—C21 | 23.2 (3) |
C8—C7—C14—C15 | 2.5 (2) | N5—C14—N4—C5 | −104.12 (16) |
N4—C14—C15—C16 | −32.1 (2) | C15—C14—N4—C5 | 130.19 (16) |
N5—C14—C15—C16 | −155.98 (17) | C7—C14—N4—C5 | 4.64 (18) |
C7—C14—C15—C16 | 86.0 (2) | N5—C14—N4—C21 | 50.83 (18) |
N4—C14—C15—C20 | 153.17 (17) | C15—C14—N4—C21 | −74.86 (18) |
N5—C14—C15—C20 | 29.3 (2) | C7—C14—N4—C21 | 159.59 (14) |
C7—C14—C15—C20 | −88.7 (2) | N6—C21—N4—C5 | 96.9 (2) |
C20—C15—C16—C17 | 2.2 (3) | N6—C21—N4—C14 | −53.6 (2) |
C14—C15—C16—C17 | −172.49 (19) | N3—C6—N5—C14 | 10.25 (19) |
C15—C16—C17—C18 | −0.4 (3) | S2—C6—N5—C14 | −172.23 (12) |
C16—C17—C18—C19 | −1.5 (4) | N3—C6—N5—C22 | 158.67 (15) |
C17—C18—C19—C20 | 1.5 (3) | S2—C6—N5—C22 | −23.8 (2) |
C16—C15—C20—C19 | −2.2 (3) | N4—C14—N5—C6 | 101.81 (16) |
C14—C15—C20—C19 | 172.53 (18) | C15—C14—N5—C6 | −132.65 (15) |
C18—C19—C20—C15 | 0.4 (3) | C7—C14—N5—C6 | −7.11 (17) |
N6—C23—C24—O2 | 65.1 (3) | N4—C14—N5—C22 | −50.61 (18) |
N2—C3—N1—C4 | −53.7 (2) | C15—C14—N5—C22 | 74.93 (18) |
N2—C3—N1—C2 | 74.92 (19) | C7—C14—N5—C22 | −159.53 (13) |
N3—C4—N1—C3 | 54.3 (2) | N6—C22—N5—C6 | −94.4 (2) |
N3—C4—N1—C2 | −75.12 (18) | N6—C22—N5—C14 | 53.41 (19) |
C1—C2—N1—C3 | 152.21 (17) | N5—C22—N6—C21 | −52.6 (2) |
C1—C2—N1—C4 | −80.1 (2) | N5—C22—N6—C23 | 75.5 (2) |
N4—C5—N2—C7 | 10.2 (2) | N4—C21—N6—C22 | 52.5 (2) |
S1—C5—N2—C7 | −173.19 (13) | N4—C21—N6—C23 | −77.0 (2) |
N4—C5—N2—C3 | 156.33 (16) | C24—C23—N6—C22 | 67.6 (2) |
S1—C5—N2—C3 | −27.1 (3) | C24—C23—N6—C21 | −165.17 (18) |
N3—C7—N2—C5 | 101.30 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S2i | 0.81 (2) | 2.61 (2) | 3.337 (2) | 151 (3) |
O2—H2···S2ii | 0.83 (2) | 2.60 (1) | 3.409 (2) | 165 (4) |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C24H28N6O2S2 |
Mr | 496.64 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 10.8207 (3), 11.9259 (3), 18.7222 (5) |
β (°) | 95.917 (1) |
V (Å3) | 2403.16 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.26 |
Crystal size (mm) | 0.30 × 0.20 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick,1996) |
Tmin, Tmax | 0.927, 0.975 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 26638, 5248, 3908 |
Rint | 0.048 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.141, 1.04 |
No. of reflections | 5248 |
No. of parameters | 313 |
No. of restraints | 2 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.43, −0.31 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···S2i | 0.81 (2) | 2.605 (19) | 3.337 (2) | 151 (3) |
O2—H2···S2ii | 0.83 (2) | 2.599 (14) | 3.409 (2) | 165 (4) |
Symmetry codes: (i) −x, y−1/2, −z+1/2; (ii) −x, −y+1, −z. |
Acknowledgements
The authors thank Professor An-Xin Wu for technical assistance and Dr Xiang-Gao Meng for the data collection.
References
Broan, C. J., Butler, A. R., Reed, D. & Sadler, I. H. (1989). J. Chem. Soc. Perkin Trans. 2, pp. 731–740. CrossRef Google Scholar
Bruker (2001). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Gao, M., Cao, L., Wang, Z., Sun, J., She, N. & Wu, A. (2009). Synlett, pp. 315–319. Google Scholar
Li, Y., Yin, G., Guo, H., Zhou, B. & Wu, A. (2006). Synthesis, pp. 2897–2902. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The rigid concave shape of glycoluril makes it a versatile building block to construct various supramolecular objects (Gao et al., 2009). We report here the structure of the title thioglycoluril derivative (Fig. 1), which is a potential receptor in supramolecular chemistry.
The title compound, C24H28N6O2S2, is a thioglycoluril derivative. The crystal packing is stabilized by intermolecular O–H···S hydrogen bonds (Table 1).