organic compounds
Methyl 2-(5-iodo-7-methyl-3-methylsulfinyl-1-benzofuran-2-yl)acetate
aDepartment of Chemistry, Dongeui University, San 24 Kaya-dong Busanjin-gu, Busan 614-714, Republic of Korea, and bDepartment of Chemistry, Pukyong National University, 599-1 Daeyeon 3-dong Nam-gu, Busan 608-737, Republic of Korea
*Correspondence e-mail: uklee@pknu.ac.kr
There are two symmetry-independent molecules in the 13H13IO4S. In each molecule, the O atom and the methyl group of the methylsulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment. The is stabilized by aromatic π–π interactions between the benzene and furan ring [centroid–centroid distance = 3.866 (7) Å], and by intermolecular C—H⋯π interactions and a sulfinyl–sulfinyl interaction [S⋯O = 3.025 (4) Å]. The also exhibits weak intermolecular C—H⋯O hydrogen bonds and two different I⋯O halogen bonds.
of the title compound, CRelated literature
For the crystal structures of similar alkyl 2-(5-iodo-3-methylsulfinyl-1-benzofuran-2-yl)acetate derivatives. see: Choi et al. (2008a,b). For halogen bonding, see: Politzer et al. (2007). For carbonyl–carbonyl interactions, see: Allen et al. (1998).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2001); cell SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809016298/gw2062sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809016298/gw2062Isup2.hkl
77% 3–chloroperoxybenzoic acid (123 mg, 0.55 mmol) was added in small portions to a stirred solution of methyl 2-(5-iodo-7-methyl-3-methylsulfanyl-1-benzofuran-2-yl)acetate (202 mg, 0.5 mmol) in dichloromethane (30 ml) at 273 K. After being stirred for 3 h at room temperature, the mixture was washed with saturated sodium bicarbonate solution and the organic layer was separated, dried over magnesium sulfate, filtered and concentrated in vacuum. The residue was purified by δ 2.46 (s, 3H), 3.05 (s, 3H), 3.76 (s, 3H), 4.07 (s, 2H), 7.49 (s, 1H), 8.07 (s, 1H); EI—MS 392 [M+].
(ethyl acetate) to afford the title compound as a colorless solid [yield 83%, m.p. 414–415 K; Rf = 0.63 (ethyl acetate)]. Single crystals suitable for X-ray diffraction were prepared by evaporation of a solution of the title compound in benzene at room temperature. Spectroscopic analysis: 1H NMR (CDCl3, 400 MHz)All H atoms were geometrically positioned and refined using a riding model, with C—H = 0.93 Å for the aryl, 0.97 Å for the methylene, and 0.96 Å for the methyl H atoms. Uiso(H) = 1.2Ueq(C) for the aryl and methylene H atoms, and 1.5Ueq(C) for methyl H atoms.
Data collection: SMART (Bruker, 2001); cell
SAINT (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structure of the title compound, showing displacement ellipsoids drawn at the 30% probability level. | |
Fig. 2. C—H···O hydrogen bond and I···O halogen bond (dotted lines) in the title compound [Symmetry code: (i) x, y - 1, z + 1; (ii) x + 1, y, z; (iii) -x + 1, -y, -z + 1; (iv) -x + 2, -y, -z + 1; (v) -x + 2, -y + 1, -z; (vi) 2 - x, 1 - y, 1 - z; (vii) - x + 1, - y + 1, - z.] | |
Fig. 3. π—π, C—H···π, and S···O interactions (dotted lines) in the title compound. Cg denotes the ring centroids [Symmetry code: (iii) - x + 1, - y, - z + 1; (viii) - x + 1, - y + 2, - z; (ix) - x + 2, - y, - z + 1; (x) x + 1, y, z; (xi) - x + 2, - y + 1, - z + 1.] |
C13H13IO4S | Z = 4 |
Mr = 392.19 | F(000) = 768 |
Triclinic, P1 | Dx = 1.767 Mg m−3 |
Hall symbol: -p 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.5424 (4) Å | Cell parameters from 6307 reflections |
b = 11.2177 (6) Å | θ = 2.3–28.2° |
c = 17.845 (1) Å | µ = 2.32 mm−1 |
α = 77.701 (1)° | T = 293 K |
β = 88.074 (1)° | Block, colorless |
γ = 88.229 (1)° | 0.30 × 0.20 × 0.10 mm |
V = 1473.92 (14) Å3 |
Bruker SMART CCD diffractometer | 6248 independent reflections |
Radiation source: fine-focus sealed tube | 5328 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
Detector resolution: 10.0 pixels mm-1 | θmax = 27.0°, θmin = 1.9° |
ϕ and ω scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1999) | k = −14→14 |
Tmin = 0.574, Tmax = 0.790 | l = −22→22 |
12617 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.088 | H-atom parameters constrained |
S = 1.18 | w = 1/[σ2(Fo2) + (0.0184P)2 + 4.3135P] where P = (Fo2 + 2Fc2)/3 |
6248 reflections | (Δ/σ)max < 0.001 |
349 parameters | Δρmax = 1.15 e Å−3 |
0 restraints | Δρmin = −1.46 e Å−3 |
C13H13IO4S | γ = 88.229 (1)° |
Mr = 392.19 | V = 1473.92 (14) Å3 |
Triclinic, P1 | Z = 4 |
a = 7.5424 (4) Å | Mo Kα radiation |
b = 11.2177 (6) Å | µ = 2.32 mm−1 |
c = 17.845 (1) Å | T = 293 K |
α = 77.701 (1)° | 0.30 × 0.20 × 0.10 mm |
β = 88.074 (1)° |
Bruker SMART CCD diffractometer | 6248 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1999) | 5328 reflections with I > 2σ(I) |
Tmin = 0.574, Tmax = 0.790 | Rint = 0.027 |
12617 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.088 | H-atom parameters constrained |
S = 1.18 | Δρmax = 1.15 e Å−3 |
6248 reflections | Δρmin = −1.46 e Å−3 |
349 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.66948 (5) | −0.00958 (3) | 0.780861 (19) | 0.03974 (11) | |
S1 | 0.92033 (15) | 0.36686 (11) | 0.47095 (7) | 0.0253 (3) | |
O1 | 0.7992 (4) | 0.0463 (3) | 0.43207 (17) | 0.0234 (7) | |
O2 | 0.7940 (4) | 0.2574 (3) | 0.20886 (18) | 0.0285 (8) | |
O3 | 0.6320 (5) | 0.3131 (3) | 0.30365 (19) | 0.0340 (8) | |
O4 | 1.0056 (5) | 0.3653 (3) | 0.5448 (2) | 0.0343 (8) | |
C1 | 0.8593 (6) | 0.2142 (4) | 0.4747 (3) | 0.0210 (9) | |
C2 | 0.7987 (6) | 0.1252 (4) | 0.5400 (3) | 0.0193 (9) | |
C3 | 0.7743 (6) | 0.1181 (4) | 0.6187 (3) | 0.0217 (10) | |
H3 | 0.8012 | 0.1827 | 0.6411 | 0.026* | |
C4 | 0.7085 (6) | 0.0108 (4) | 0.6616 (3) | 0.0226 (10) | |
C5 | 0.6671 (6) | −0.0880 (4) | 0.6299 (3) | 0.0249 (10) | |
H5 | 0.6212 | −0.1579 | 0.6614 | 0.030* | |
C6 | 0.6938 (6) | −0.0833 (4) | 0.5515 (3) | 0.0260 (10) | |
C7 | 0.7615 (5) | 0.0234 (4) | 0.5097 (2) | 0.0192 (9) | |
C8 | 0.8613 (6) | 0.1634 (4) | 0.4126 (3) | 0.0236 (10) | |
C9 | 0.9133 (6) | 0.2074 (5) | 0.3309 (3) | 0.0304 (12) | |
H9A | 0.9629 | 0.1393 | 0.3109 | 0.037* | |
H9B | 1.0056 | 0.2669 | 0.3274 | 0.037* | |
C10 | 0.7613 (6) | 0.2650 (4) | 0.2812 (3) | 0.0229 (10) | |
C11 | 0.6621 (7) | 0.3127 (5) | 0.1547 (3) | 0.0333 (12) | |
H11A | 0.5579 | 0.2640 | 0.1625 | 0.050* | |
H11B | 0.7086 | 0.3177 | 0.1034 | 0.050* | |
H11C | 0.6319 | 0.3933 | 0.1621 | 0.050* | |
C12 | 0.6516 (7) | −0.1891 (5) | 0.5159 (3) | 0.0331 (12) | |
H12A | 0.5628 | −0.1639 | 0.4781 | 0.050* | |
H12B | 0.6079 | −0.2550 | 0.5550 | 0.050* | |
H12C | 0.7571 | −0.2158 | 0.4920 | 0.050* | |
C13 | 0.7001 (7) | 0.4299 (5) | 0.4797 (4) | 0.0403 (14) | |
H13A | 0.6444 | 0.3883 | 0.5267 | 0.060* | |
H13B | 0.6317 | 0.4198 | 0.4371 | 0.060* | |
H13C | 0.7069 | 0.5151 | 0.4798 | 0.060* | |
I2 | 1.27204 (4) | 0.47039 (3) | 0.246411 (19) | 0.02932 (10) | |
S2 | 0.68848 (15) | 0.62050 (11) | −0.02104 (6) | 0.0208 (2) | |
O5 | 0.5483 (4) | 0.7323 (3) | 0.16778 (17) | 0.0228 (7) | |
O6 | 0.2057 (4) | 0.9129 (3) | −0.0229 (2) | 0.0348 (9) | |
O7 | 0.5006 (4) | 0.8964 (3) | −0.04426 (19) | 0.0307 (8) | |
O8 | 0.7522 (4) | 0.4897 (3) | −0.01091 (18) | 0.0288 (8) | |
C14 | 0.6717 (6) | 0.6561 (4) | 0.0710 (2) | 0.0192 (9) | |
C15 | 0.7950 (6) | 0.6310 (4) | 0.1331 (2) | 0.0201 (9) | |
C16 | 0.9597 (6) | 0.5710 (4) | 0.1474 (3) | 0.0226 (10) | |
H16 | 1.0203 | 0.5374 | 0.1103 | 0.027* | |
C17 | 1.0283 (6) | 0.5640 (4) | 0.2189 (3) | 0.0241 (10) | |
C18 | 0.9410 (7) | 0.6153 (4) | 0.2756 (3) | 0.0287 (11) | |
H18 | 0.9940 | 0.6092 | 0.3227 | 0.034* | |
C19 | 0.7787 (7) | 0.6744 (5) | 0.2632 (3) | 0.0291 (11) | |
C20 | 0.7105 (6) | 0.6795 (4) | 0.1915 (3) | 0.0221 (10) | |
C21 | 0.5275 (6) | 0.7141 (4) | 0.0946 (2) | 0.0189 (9) | |
C22 | 0.3549 (6) | 0.7575 (4) | 0.0601 (3) | 0.0232 (10) | |
H22A | 0.2778 | 0.7819 | 0.0991 | 0.028* | |
H22B | 0.3000 | 0.6902 | 0.0442 | 0.028* | |
C23 | 0.3682 (6) | 0.8633 (4) | −0.0081 (3) | 0.0215 (10) | |
C24 | 0.1942 (8) | 1.0119 (5) | −0.0898 (3) | 0.0457 (15) | |
H24A | 0.2691 | 1.0767 | −0.0837 | 0.069* | |
H24B | 0.0737 | 1.0418 | −0.0953 | 0.069* | |
H24C | 0.2322 | 0.9828 | −0.1347 | 0.069* | |
C25 | 0.6774 (8) | 0.7295 (6) | 0.3224 (3) | 0.0482 (16) | |
H25A | 0.7436 | 0.7163 | 0.3686 | 0.072* | |
H25B | 0.5643 | 0.6917 | 0.3333 | 0.072* | |
H25C | 0.6600 | 0.8155 | 0.3031 | 0.072* | |
C26 | 0.8772 (6) | 0.7101 (5) | −0.0563 (3) | 0.0284 (11) | |
H26A | 0.9763 | 0.6818 | −0.0243 | 0.043* | |
H26B | 0.8507 | 0.7941 | −0.0556 | 0.043* | |
H26C | 0.9061 | 0.7024 | −0.1079 | 0.043* |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.0579 (3) | 0.0384 (2) | 0.02000 (17) | 0.01037 (17) | 0.00379 (15) | −0.00193 (14) |
S1 | 0.0221 (6) | 0.0216 (6) | 0.0315 (6) | −0.0007 (5) | −0.0032 (5) | −0.0038 (5) |
O1 | 0.0225 (16) | 0.0297 (18) | 0.0195 (16) | 0.0001 (14) | −0.0032 (13) | −0.0085 (14) |
O2 | 0.0289 (18) | 0.038 (2) | 0.0172 (16) | 0.0048 (15) | −0.0014 (14) | −0.0026 (14) |
O3 | 0.0275 (19) | 0.045 (2) | 0.0254 (18) | 0.0095 (16) | 0.0018 (15) | −0.0014 (16) |
O4 | 0.040 (2) | 0.030 (2) | 0.0317 (19) | −0.0043 (16) | −0.0048 (16) | −0.0033 (16) |
C1 | 0.019 (2) | 0.020 (2) | 0.024 (2) | −0.0017 (18) | −0.0020 (18) | −0.0055 (19) |
C2 | 0.016 (2) | 0.017 (2) | 0.024 (2) | 0.0020 (17) | −0.0005 (17) | −0.0028 (18) |
C3 | 0.024 (2) | 0.021 (2) | 0.021 (2) | 0.0042 (18) | −0.0073 (18) | −0.0058 (18) |
C4 | 0.020 (2) | 0.029 (3) | 0.020 (2) | 0.0078 (19) | −0.0036 (18) | −0.0077 (19) |
C5 | 0.022 (2) | 0.018 (2) | 0.032 (3) | 0.0036 (18) | 0.0000 (19) | −0.0002 (19) |
C6 | 0.018 (2) | 0.023 (2) | 0.038 (3) | 0.0060 (19) | −0.005 (2) | −0.009 (2) |
C7 | 0.014 (2) | 0.028 (2) | 0.016 (2) | 0.0004 (18) | −0.0050 (16) | −0.0048 (18) |
C8 | 0.016 (2) | 0.025 (2) | 0.028 (2) | 0.0031 (18) | −0.0052 (18) | −0.001 (2) |
C9 | 0.021 (2) | 0.048 (3) | 0.020 (2) | 0.005 (2) | 0.0014 (19) | −0.002 (2) |
C10 | 0.018 (2) | 0.027 (3) | 0.021 (2) | −0.0007 (19) | −0.0011 (18) | 0.0006 (19) |
C11 | 0.032 (3) | 0.044 (3) | 0.021 (2) | 0.001 (2) | −0.005 (2) | −0.002 (2) |
C12 | 0.026 (3) | 0.028 (3) | 0.048 (3) | 0.001 (2) | −0.004 (2) | −0.015 (2) |
C13 | 0.022 (3) | 0.023 (3) | 0.075 (4) | 0.002 (2) | −0.007 (3) | −0.010 (3) |
I2 | 0.02201 (16) | 0.03174 (19) | 0.03059 (18) | 0.00357 (13) | −0.00415 (13) | 0.00141 (14) |
S2 | 0.0241 (6) | 0.0247 (6) | 0.0145 (5) | 0.0012 (5) | −0.0013 (4) | −0.0061 (4) |
O5 | 0.0260 (17) | 0.0245 (17) | 0.0187 (16) | 0.0080 (13) | −0.0023 (13) | −0.0074 (13) |
O6 | 0.0237 (18) | 0.032 (2) | 0.043 (2) | 0.0059 (15) | −0.0063 (16) | 0.0050 (16) |
O7 | 0.0295 (19) | 0.033 (2) | 0.0262 (18) | 0.0012 (15) | 0.0048 (15) | 0.0008 (15) |
O8 | 0.037 (2) | 0.0257 (18) | 0.0240 (17) | 0.0027 (15) | 0.0050 (15) | −0.0080 (14) |
C14 | 0.022 (2) | 0.020 (2) | 0.015 (2) | −0.0008 (18) | 0.0016 (17) | −0.0042 (17) |
C15 | 0.026 (2) | 0.019 (2) | 0.016 (2) | −0.0026 (18) | 0.0017 (18) | −0.0044 (17) |
C16 | 0.024 (2) | 0.023 (2) | 0.020 (2) | 0.0008 (19) | 0.0015 (18) | −0.0059 (19) |
C17 | 0.022 (2) | 0.020 (2) | 0.027 (2) | 0.0006 (19) | −0.0035 (19) | 0.0011 (19) |
C18 | 0.036 (3) | 0.030 (3) | 0.020 (2) | 0.004 (2) | −0.011 (2) | −0.005 (2) |
C19 | 0.041 (3) | 0.031 (3) | 0.016 (2) | 0.010 (2) | −0.006 (2) | −0.009 (2) |
C20 | 0.027 (2) | 0.020 (2) | 0.018 (2) | 0.0035 (19) | −0.0024 (18) | −0.0028 (18) |
C21 | 0.024 (2) | 0.019 (2) | 0.014 (2) | −0.0021 (18) | −0.0015 (17) | −0.0018 (17) |
C22 | 0.022 (2) | 0.030 (3) | 0.017 (2) | −0.0006 (19) | 0.0015 (18) | −0.0037 (19) |
C23 | 0.027 (2) | 0.015 (2) | 0.026 (2) | 0.0066 (19) | 0.001 (2) | −0.0125 (19) |
C24 | 0.037 (3) | 0.038 (3) | 0.053 (4) | 0.011 (3) | −0.011 (3) | 0.011 (3) |
C25 | 0.057 (4) | 0.066 (4) | 0.027 (3) | 0.029 (3) | −0.011 (3) | −0.023 (3) |
C26 | 0.031 (3) | 0.032 (3) | 0.021 (2) | −0.004 (2) | 0.008 (2) | −0.002 (2) |
I1—C4 | 2.103 (4) | I2—C17 | 2.108 (4) |
I1—O7i | 3.300 (3) | I2—O3iii | 3.264 (3) |
S1—O4 | 1.482 (4) | S2—O8 | 1.505 (3) |
S1—C1 | 1.773 (5) | S2—C14 | 1.771 (4) |
S1—C13 | 1.800 (5) | S2—C26 | 1.786 (5) |
S1—O4ii | 3.025 (4) | O5—C21 | 1.379 (5) |
O1—C7 | 1.375 (5) | O5—C20 | 1.382 (5) |
O1—C8 | 1.378 (6) | O6—C23 | 1.341 (5) |
O2—C10 | 1.326 (6) | O6—C24 | 1.451 (6) |
O2—C11 | 1.442 (6) | O7—C23 | 1.196 (5) |
O3—C10 | 1.198 (5) | C14—C21 | 1.351 (6) |
C1—C8 | 1.349 (6) | C14—C15 | 1.446 (6) |
C1—C2 | 1.435 (6) | C15—C20 | 1.400 (6) |
C2—C3 | 1.397 (6) | C15—C16 | 1.400 (6) |
C2—C7 | 1.403 (6) | C16—C17 | 1.379 (6) |
C3—C4 | 1.378 (6) | C16—H16 | 0.9300 |
C3—H3 | 0.9300 | C17—C18 | 1.403 (7) |
C4—C5 | 1.395 (7) | C18—C19 | 1.376 (7) |
C5—C6 | 1.397 (7) | C18—H18 | 0.9300 |
C5—H5 | 0.9300 | C19—C20 | 1.385 (6) |
C6—C7 | 1.371 (7) | C19—C25 | 1.509 (7) |
C6—C12 | 1.507 (7) | C21—C22 | 1.482 (6) |
C8—C9 | 1.481 (6) | C22—C23 | 1.511 (6) |
C9—C10 | 1.516 (6) | C22—H22A | 0.9700 |
C9—H9A | 0.9700 | C22—H22B | 0.9700 |
C9—H9B | 0.9700 | C24—H24A | 0.9600 |
C11—H11A | 0.9600 | C24—H24B | 0.9600 |
C11—H11B | 0.9600 | C24—H24C | 0.9600 |
C11—H11C | 0.9600 | C25—H25A | 0.9600 |
C12—H12A | 0.9600 | C25—H25B | 0.9600 |
C12—H12B | 0.9600 | C25—H25C | 0.9600 |
C12—H12C | 0.9600 | C26—H26A | 0.9600 |
C13—H13A | 0.9600 | C26—H26B | 0.9600 |
C13—H13B | 0.9600 | C26—H26C | 0.9600 |
C13—H13C | 0.9600 | ||
I1···O7i | 3.300 (3) | I2···O3iii | 3.264 (3) |
C4—I1—O7i | 160.08 (15) | H13B—C13—H13C | 109.5 |
O4—S1—C1 | 105.7 (2) | C17—I2—O3iii | 174.78 (14) |
O4—S1—C13 | 106.0 (3) | O8—S2—C14 | 107.7 (2) |
C1—S1—C13 | 97.4 (2) | O8—S2—C26 | 105.5 (2) |
O4—S1—O4ii | 78.94 (17) | C14—S2—C26 | 97.6 (2) |
C1—S1—O4ii | 174.59 (17) | C21—O5—C20 | 106.4 (3) |
C13—S1—O4ii | 78.48 (18) | C23—O6—C24 | 115.7 (4) |
C7—O1—C8 | 106.4 (3) | C21—C14—C15 | 107.9 (4) |
C10—O2—C11 | 116.0 (4) | C21—C14—S2 | 122.2 (3) |
C8—C1—C2 | 108.3 (4) | C15—C14—S2 | 130.0 (3) |
C8—C1—S1 | 123.4 (4) | C20—C15—C16 | 118.7 (4) |
C2—C1—S1 | 128.3 (3) | C20—C15—C14 | 104.4 (4) |
C3—C2—C7 | 119.1 (4) | C16—C15—C14 | 136.8 (4) |
C3—C2—C1 | 136.7 (4) | C17—C16—C15 | 117.0 (4) |
C7—C2—C1 | 104.2 (4) | C17—C16—H16 | 121.5 |
C4—C3—C2 | 116.8 (4) | C15—C16—H16 | 121.5 |
C4—C3—H3 | 121.6 | C16—C17—C18 | 122.7 (4) |
C2—C3—H3 | 121.6 | C16—C17—I2 | 119.5 (3) |
C3—C4—C5 | 123.2 (4) | C18—C17—I2 | 117.8 (3) |
C3—C4—I1 | 119.8 (3) | C19—C18—C17 | 121.4 (4) |
C5—C4—I1 | 117.1 (3) | C19—C18—H18 | 119.3 |
C4—C5—C6 | 120.7 (4) | C17—C18—H18 | 119.3 |
C4—C5—H5 | 119.6 | C18—C19—C20 | 115.2 (4) |
C6—C5—H5 | 119.6 | C18—C19—C25 | 123.8 (4) |
C7—C6—C5 | 115.5 (4) | C20—C19—C25 | 121.0 (5) |
C7—C6—C12 | 122.6 (5) | O5—C20—C19 | 124.6 (4) |
C5—C6—C12 | 121.8 (5) | O5—C20—C15 | 110.5 (4) |
C6—C7—O1 | 124.8 (4) | C19—C20—C15 | 124.9 (4) |
C6—C7—C2 | 124.6 (4) | C14—C21—O5 | 110.8 (4) |
O1—C7—C2 | 110.6 (4) | C14—C21—C22 | 134.1 (4) |
C1—C8—O1 | 110.5 (4) | O5—C21—C22 | 115.1 (4) |
C1—C8—C9 | 133.7 (5) | C21—C22—C23 | 114.2 (4) |
O1—C8—C9 | 115.8 (4) | C21—C22—H22A | 108.7 |
C8—C9—C10 | 113.7 (4) | C23—C22—H22A | 108.7 |
C8—C9—H9A | 108.8 | C21—C22—H22B | 108.7 |
C10—C9—H9A | 108.8 | C23—C22—H22B | 108.7 |
C8—C9—H9B | 108.8 | H22A—C22—H22B | 107.6 |
C10—C9—H9B | 108.8 | O7—C23—O6 | 125.1 (4) |
H9A—C9—H9B | 107.7 | O7—C23—C22 | 126.0 (4) |
O3—C10—O2 | 124.9 (4) | O6—C23—C22 | 108.8 (4) |
O3—C10—C9 | 124.9 (4) | O6—C24—H24A | 109.5 |
O2—C10—C9 | 110.2 (4) | O6—C24—H24B | 109.5 |
O2—C11—H11A | 109.5 | H24A—C24—H24B | 109.5 |
O2—C11—H11B | 109.5 | O6—C24—H24C | 109.5 |
H11A—C11—H11B | 109.5 | H24A—C24—H24C | 109.5 |
O2—C11—H11C | 109.5 | H24B—C24—H24C | 109.5 |
H11A—C11—H11C | 109.5 | C19—C25—H25A | 109.5 |
H11B—C11—H11C | 109.5 | C19—C25—H25B | 109.5 |
C6—C12—H12A | 109.5 | H25A—C25—H25B | 109.5 |
C6—C12—H12B | 109.5 | C19—C25—H25C | 109.5 |
H12A—C12—H12B | 109.5 | H25A—C25—H25C | 109.5 |
C6—C12—H12C | 109.5 | H25B—C25—H25C | 109.5 |
H12A—C12—H12C | 109.5 | S2—C26—H26A | 109.5 |
H12B—C12—H12C | 109.5 | S2—C26—H26B | 109.5 |
S1—C13—H13A | 109.5 | H26A—C26—H26B | 109.5 |
S1—C13—H13B | 109.5 | S2—C26—H26C | 109.5 |
H13A—C13—H13B | 109.5 | H26A—C26—H26C | 109.5 |
S1—C13—H13C | 109.5 | H26B—C26—H26C | 109.5 |
H13A—C13—H13C | 109.5 | ||
O4—S1—C1—C8 | −146.0 (4) | C8—C9—C10—O2 | −155.0 (4) |
C13—S1—C1—C8 | 105.1 (4) | O8—S2—C14—C21 | −133.1 (4) |
O4—S1—C1—C2 | 35.0 (5) | C26—S2—C14—C21 | 117.9 (4) |
C13—S1—C1—C2 | −74.0 (5) | O8—S2—C14—C15 | 45.9 (5) |
C8—C1—C2—C3 | 176.9 (5) | C26—S2—C14—C15 | −63.1 (5) |
S1—C1—C2—C3 | −4.0 (8) | C21—C14—C15—C20 | −0.5 (5) |
C8—C1—C2—C7 | −2.0 (5) | S2—C14—C15—C20 | −179.6 (4) |
S1—C1—C2—C7 | 177.2 (3) | C21—C14—C15—C16 | 176.6 (5) |
C7—C2—C3—C4 | −2.1 (6) | S2—C14—C15—C16 | −2.5 (8) |
C1—C2—C3—C4 | 179.2 (5) | C20—C15—C16—C17 | −0.1 (6) |
C2—C3—C4—C5 | 0.1 (7) | C14—C15—C16—C17 | −176.9 (5) |
C2—C3—C4—I1 | 179.4 (3) | C15—C16—C17—C18 | −0.9 (7) |
O7i—I1—C4—C3 | 150.8 (3) | C15—C16—C17—I2 | 178.1 (3) |
O7i—I1—C4—C5 | −29.9 (6) | C16—C17—C18—C19 | 1.1 (8) |
C3—C4—C5—C6 | 1.0 (7) | I2—C17—C18—C19 | −177.9 (4) |
I1—C4—C5—C6 | −178.2 (3) | C17—C18—C19—C20 | −0.3 (7) |
C4—C5—C6—C7 | −0.1 (6) | C17—C18—C19—C25 | 179.0 (5) |
C4—C5—C6—C12 | 179.5 (4) | C21—O5—C20—C19 | −177.8 (5) |
C5—C6—C7—O1 | 179.3 (4) | C21—O5—C20—C15 | 1.7 (5) |
C12—C6—C7—O1 | −0.3 (7) | C18—C19—C20—O5 | 178.6 (4) |
C5—C6—C7—C2 | −2.0 (7) | C25—C19—C20—O5 | −0.6 (8) |
C12—C6—C7—C2 | 178.4 (4) | C18—C19—C20—C15 | −0.7 (8) |
C8—O1—C7—C6 | 179.0 (4) | C25—C19—C20—C15 | −180.0 (5) |
C8—O1—C7—C2 | 0.1 (5) | C16—C15—C20—O5 | −178.5 (4) |
C3—C2—C7—C6 | 3.2 (7) | C14—C15—C20—O5 | −0.7 (5) |
C1—C2—C7—C6 | −177.7 (4) | C16—C15—C20—C19 | 0.9 (7) |
C3—C2—C7—O1 | −178.0 (4) | C14—C15—C20—C19 | 178.7 (5) |
C1—C2—C7—O1 | 1.1 (5) | C15—C14—C21—O5 | 1.6 (5) |
C2—C1—C8—O1 | 2.2 (5) | S2—C14—C21—O5 | −179.2 (3) |
S1—C1—C8—O1 | −177.0 (3) | C15—C14—C21—C22 | −176.3 (5) |
C2—C1—C8—C9 | −178.5 (5) | S2—C14—C21—C22 | 2.9 (7) |
S1—C1—C8—C9 | 2.3 (8) | C20—O5—C21—C14 | −2.0 (5) |
C7—O1—C8—C1 | −1.4 (5) | C20—O5—C21—C22 | 176.3 (4) |
C7—O1—C8—C9 | 179.1 (4) | C14—C21—C22—C23 | −68.7 (7) |
C1—C8—C9—C10 | −92.0 (6) | O5—C21—C22—C23 | 113.6 (4) |
O1—C8—C9—C10 | 87.3 (5) | C24—O6—C23—O7 | 1.9 (7) |
C11—O2—C10—O3 | 0.4 (7) | C24—O6—C23—C22 | −176.7 (4) |
C11—O2—C10—C9 | −177.9 (4) | C21—C22—C23—O7 | 15.9 (7) |
C8—C9—C10—O3 | 26.6 (7) | C21—C22—C23—O6 | −165.5 (4) |
Symmetry codes: (i) x, y−1, z+1; (ii) −x+2, −y+1, −z+1; (iii) x+1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O3iv | 0.93 | 2.59 | 3.430 (6) | 150 |
C11—H11B···O8 | 0.96 | 2.51 | 3.254 (6) | 134 |
C12—H12C···O4v | 0.96 | 2.58 | 3.489 (6) | 158 |
C16—H16···O8vi | 0.93 | 2.48 | 3.373 (6) | 160 |
C18—H18···O4ii | 0.93 | 2.44 | 3.297 (6) | 153 |
C22—H22B···O8vii | 0.97 | 2.27 | 3.215 (6) | 164 |
C12—H12A···Cg1iv | 0.96 | 2.85 | 3.734 (7) | 153 |
C24—H24A···Cg3viii | 0.96 | 2.73 | 3.574 (7) | 147 |
Symmetry codes: (ii) −x+2, −y+1, −z+1; (iv) −x+1, −y, −z+1; (v) −x+2, −y, −z+1; (vi) −x+2, −y+1, −z; (vii) −x+1, −y+1, −z; (viii) −x+1, −y+2, −z. |
Experimental details
Crystal data | |
Chemical formula | C13H13IO4S |
Mr | 392.19 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.5424 (4), 11.2177 (6), 17.845 (1) |
α, β, γ (°) | 77.701 (1), 88.074 (1), 88.229 (1) |
V (Å3) | 1473.92 (14) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.32 |
Crystal size (mm) | 0.30 × 0.20 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1999) |
Tmin, Tmax | 0.574, 0.790 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12617, 6248, 5328 |
Rint | 0.027 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.088, 1.18 |
No. of reflections | 6248 |
No. of parameters | 349 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 1.15, −1.46 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and DIAMOND (Brandenburg, 1998).
I1···O7i | 3.300 (3) | I2···O3ii | 3.264 (3) |
Symmetry codes: (i) x, y−1, z+1; (ii) x+1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O3iii | 0.93 | 2.59 | 3.430 (6) | 149.8 |
C11—H11B···O8 | 0.96 | 2.51 | 3.254 (6) | 134.1 |
C12—H12C···O4iv | 0.96 | 2.58 | 3.489 (6) | 158.2 |
C16—H16···O8v | 0.93 | 2.48 | 3.373 (6) | 159.8 |
C18—H18···O4vi | 0.93 | 2.44 | 3.297 (6) | 152.7 |
C22—H22B···O8vii | 0.97 | 2.27 | 3.215 (6) | 164.3 |
C12—H12A···Cg1iii | 0.96 | 2.85 | 3.734 (7) | 153.3 |
C24—H24A···Cg3viii | 0.96 | 2.73 | 3.574 (7) | 146.5 |
Symmetry codes: (iii) −x+1, −y, −z+1; (iv) −x+2, −y, −z+1; (v) −x+2, −y+1, −z; (vi) −x+2, −y+1, −z+1; (vii) −x+1, −y+1, −z; (viii) −x+1, −y+2, −z. |
References
Allen, F. H., Baalham, C. A., Lommerse, J. P. M. & Raithby, P. R. (1998). Acta Cryst. B54, 320–329. Web of Science CrossRef CAS IUCr Journals Google Scholar
Brandenburg, K. (1998). DIAMOND. Crystal Impact GbR, Bonn, Germany. Google Scholar
Bruker (2001). SAINT and SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2008a). Acta Cryst. E64, o2384. Web of Science CSD CrossRef IUCr Journals Google Scholar
Choi, H. D., Seo, P. J., Son, B. W. & Lee, U. (2008b). Acta Cryst. E64, o2431. Web of Science CSD CrossRef IUCr Journals Google Scholar
Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. CrossRef IUCr Journals Google Scholar
Politzer, P., Lane, P., Concha, M. C., Ma, Y. & Murray, J. S. (2007). J. Mol. Model. 13, 305–311. Web of Science CrossRef PubMed CAS Google Scholar
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Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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This work is related to our previous communications on the synthesis and structure of alkyl 2-(5-iodo-3-methylsulfinyl-1-benzofuran-2-yl)acetate analogues, viz. isopropyl 2-(5-iodo-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Choi et al., 2008a) and isopropyl 2-(5-iodo-7-methyl-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Choi et al., 2008b). Here we report the crystal structure of the title compound, methyl 2-(5-iodo-7-methyl-3-methylsulfinyl-1-benzofuran-2-yl)acetate (Fig. 1). The benzofuran unit is essentially planar, with a mean deviation of 0.017 (4) Å for two independent molecules, from the least-squares plane defined by the nine constituent atoms.
The molecular packing (Fig. 2 & 3) is stabilized by aromatic π—π interactions between the benzene ring and the furan ring of adjacent benzofuran units, with a Cg1···Cg2ix distance of 3.866 (7) Å (Cg1 and Cg2 are the centroids of the C2–C7 benzene ring and the C1/C2/C7/O1/C8 furan ring; symmetry code as in Fig. 3). The crystal packing is further stabilized by C—H···π interactions (Table 2 and Fig. 3); the first between the methyl H atom and the benzene ring of the benzofuran unit, i.e. C12—H12A···Cg1iii, the second between the methyl H atom and the furan ring of the benzofuran unit, i.e. C24—H24A···Cg3viii, respectively (Cg3 is the centroid of the C14/C15/C20/O5/C21 furan ring; symmetry code as in Fig. 3), and by an intermolecular sulfinyl–sulfinyl interaction interpreted as simliar to a type–II carbonyl–carbonyl interaction (Allen et al., 1998), with S1···O4xi and O4···S1xi distance of 3.025 (4) Å (Fig. 3; symmetry code as in Fig. 3). In addition, the crystal packing exhibits weak intermolecular C—H···O hydrogen bonds (Fig. 2 and Table 2). In crystal structure, there are two different I···O halogen bonds (Politzer et al., 2007) between the two independent iodine atoms and the oxygen atoms of neighbouring C═O units (Fig. 2 and Table 1).