organic compounds
2-Methoxy-6-(6-methyl-1H-benzimidazol-2-yl)phenol
aDepartment of Chemistry, Shaoxing University, Shaoxing 312000, People's Republic of China, bCollege of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua 321004, People's Republic of China, and cYancheng Institute of Technology, School of Chemical and Biological Engineering, Yancheng 224003, People's Republic of China
*Correspondence e-mail: chemreagent@yahoo.cn
The molecule of the title compound, C15H14N2O2 is almost planar, the dihedral angle between the 6-methyl-1H-benzimidazole plane and the 2-methoxyphenol plane being 6.9 (2)°. An intramolecular O—H⋯N hydrogen bond is present. Adjacent molecules are linked by N—H⋯O hydrogen bonds into a three-dimensional network structure. The benzoimidazole methyl group and its attached C atom are positionally disordered in a 0.724 (4):0.276 (4) ratio.
Related literature
For background to imidazole and its derivatives, see: Huang et al. (2004) and to benzimidazoles, see: Perry & Wilson (1993). For related structures, see: Savall & Fontimayor (2008).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2004); cell SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809016523/hg2503sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809016523/hg2503Isup2.hkl
A mixture of 4-methylbenzene-1,2-diamine (1 mmol) and 2-hydroxy-3-methoxybenzaldehyde (1 mmol) in ethanol (15 ml) was stirred for 8 h and then filtered. The resulting clear orange solution was vapor at room temperature for 7 d, after which orange block-shaped crystals of the title complex suitable for X-ray
were obtained, yield 45%.The H atoms were fixed geometrically and were treated as riding on their parent C atoms, with C—H distances in the range of 0.93–0.96 Å and with Uiso(H) = 1.2Ueq(parent atom), or Uiso(H) = 1.5Ueq(Cmethyl). The coordinates of the H atoms of the N—H and O—H groups were found from difference Fourier maps and were allowed for as riding atoms with O—H 0.82 Å and N—H 0.92 Å and with Uiso(H) = 1.2Ueq(O).
Data collection: APEX2 (Bruker, 2004); cell
SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXL97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The independent molecules of the title compound, showing 30% probability displacement ellipsoids and the atom-numbering scheme. |
C15H14N2O2 | F(000) = 1072 |
Mr = 254.28 | Dx = 1.262 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 2318 reflections |
a = 17.986 (3) Å | θ = 2.4–23.9° |
b = 11.4452 (16) Å | µ = 0.09 mm−1 |
c = 13.4105 (19) Å | T = 293 K |
β = 104.216 (2)° | Block, yellow |
V = 2676.1 (7) Å3 | 0.21 × 0.17 × 0.13 mm |
Z = 8 |
Bruker APEXII CCD area-detector diffractometer | 2531 independent reflections |
Radiation source: fine-focus sealed tube | 1441 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
ϕ and ω scans | θmax = 25.7°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −21→11 |
Tmin = 0.982, Tmax = 0.989 | k = −13→13 |
6836 measured reflections | l = −15→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0769P)2 + 0.8329P] where P = (Fo2 + 2Fc2)/3 |
2531 reflections | (Δ/σ)max < 0.001 |
176 parameters | Δρmax = 0.20 e Å−3 |
3 restraints | Δρmin = −0.23 e Å−3 |
C15H14N2O2 | V = 2676.1 (7) Å3 |
Mr = 254.28 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 17.986 (3) Å | µ = 0.09 mm−1 |
b = 11.4452 (16) Å | T = 293 K |
c = 13.4105 (19) Å | 0.21 × 0.17 × 0.13 mm |
β = 104.216 (2)° |
Bruker APEXII CCD area-detector diffractometer | 2531 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 1441 reflections with I > 2σ(I) |
Tmin = 0.982, Tmax = 0.989 | Rint = 0.031 |
6836 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 3 restraints |
wR(F2) = 0.169 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.20 e Å−3 |
2531 reflections | Δρmin = −0.23 e Å−3 |
176 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.34998 (10) | 0.96117 (16) | 0.14576 (12) | 0.0718 (6) | |
H1 | 0.3809 | 0.9222 | 0.1879 | 0.086* | |
O2 | 0.23740 (12) | 1.0753 (2) | 0.03072 (14) | 0.0942 (7) | |
N1 | 0.39603 (12) | 0.94335 (19) | 0.46813 (14) | 0.0644 (6) | |
H1A | 0.3689 | 0.9806 | 0.5087 | 0.077* | |
N2 | 0.42667 (11) | 0.89053 (17) | 0.32288 (14) | 0.0568 (5) | |
C1 | 0.31924 (14) | 1.0273 (2) | 0.30233 (18) | 0.0568 (6) | |
C2 | 0.30615 (14) | 1.0242 (2) | 0.19534 (18) | 0.0574 (6) | |
C3 | 0.24529 (16) | 1.0877 (2) | 0.1342 (2) | 0.0691 (8) | |
C4 | 0.20037 (17) | 1.1559 (3) | 0.1795 (2) | 0.0839 (9) | |
H4 | 0.1605 | 1.1992 | 0.1389 | 0.101* | |
C5 | 0.21404 (19) | 1.1607 (3) | 0.2856 (3) | 0.0928 (10) | |
H5 | 0.1834 | 1.2075 | 0.3158 | 0.111* | |
C6 | 0.27225 (17) | 1.0974 (3) | 0.3463 (2) | 0.0797 (9) | |
H6 | 0.2807 | 1.1009 | 0.4175 | 0.096* | |
C7 | 0.38041 (14) | 0.9559 (2) | 0.36368 (17) | 0.0554 (6) | |
C8 | 0.1738 (2) | 1.1332 (4) | −0.0374 (3) | 0.1217 (14) | |
H8A | 0.1748 | 1.1176 | −0.1074 | 0.183* | |
H8B | 0.1776 | 1.2158 | −0.0251 | 0.183* | |
H8C | 0.1266 | 1.1047 | −0.0252 | 0.183* | |
C9 | 0.45596 (15) | 0.8650 (2) | 0.49645 (19) | 0.0659 (7) | |
C10 | 0.47445 (14) | 0.8322 (2) | 0.40546 (19) | 0.0618 (7) | |
C11 | 0.53215 (16) | 0.7501 (3) | 0.4079 (2) | 0.0806 (9) | |
H11 | 0.5454 | 0.7270 | 0.3480 | 0.097* | |
C14 | 0.49349 (18) | 0.8175 (3) | 0.5915 (2) | 0.0865 (10) | |
H14 | 0.4807 | 0.8398 | 0.6519 | 0.104* | |
C12A | 0.56835 (19) | 0.7052 (3) | 0.5008 (3) | 0.1024 (16) | 0.724 (4) |
H12A | 0.6072 | 0.6509 | 0.5033 | 0.123* | 0.724 (4) |
C13A | 0.55061 (19) | 0.7359 (3) | 0.5920 (3) | 0.0988 (17) | 0.724 (4) |
C15A | 0.5957 (3) | 0.6706 (5) | 0.6876 (3) | 0.1041 (15) | 0.724 (4) |
H15A | 0.5797 | 0.6974 | 0.7469 | 0.156* | 0.724 (4) |
H15B | 0.6495 | 0.6854 | 0.6969 | 0.156* | 0.724 (4) |
H15C | 0.5861 | 0.5883 | 0.6788 | 0.156* | 0.724 (4) |
C13B | 0.56835 (19) | 0.7052 (3) | 0.5008 (3) | 0.0988 (17) | 0.276 (4) |
C12B | 0.55061 (19) | 0.7359 (3) | 0.5920 (3) | 0.1024 (16) | 0.276 (4) |
H12B | 0.5769 | 0.7018 | 0.6536 | 0.123* | 0.276 (4) |
C15B | 0.6306 (6) | 0.6287 (11) | 0.5397 (9) | 0.1041 (15) | 0.276 (4) |
H15G | 0.6498 | 0.5992 | 0.4838 | 0.156* | 0.276 (4) |
H15D | 0.6136 | 0.5648 | 0.5748 | 0.156* | 0.276 (4) |
H15E | 0.6707 | 0.6703 | 0.5868 | 0.156* | 0.276 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0768 (12) | 0.0922 (13) | 0.0482 (10) | 0.0351 (10) | 0.0186 (9) | 0.0116 (9) |
O2 | 0.0935 (15) | 0.1259 (18) | 0.0566 (12) | 0.0478 (13) | 0.0059 (10) | 0.0170 (11) |
N1 | 0.0690 (14) | 0.0807 (15) | 0.0447 (12) | −0.0114 (12) | 0.0164 (10) | 0.0033 (11) |
N2 | 0.0514 (12) | 0.0654 (13) | 0.0528 (12) | 0.0031 (10) | 0.0112 (10) | 0.0091 (10) |
C1 | 0.0562 (15) | 0.0652 (15) | 0.0518 (14) | 0.0051 (13) | 0.0186 (12) | 0.0053 (12) |
C2 | 0.0553 (14) | 0.0654 (15) | 0.0550 (15) | 0.0130 (13) | 0.0205 (12) | 0.0091 (12) |
C3 | 0.0693 (17) | 0.0807 (19) | 0.0588 (16) | 0.0191 (15) | 0.0185 (14) | 0.0146 (14) |
C4 | 0.0738 (19) | 0.094 (2) | 0.088 (2) | 0.0316 (17) | 0.0277 (17) | 0.0206 (17) |
C5 | 0.097 (2) | 0.103 (2) | 0.091 (2) | 0.038 (2) | 0.046 (2) | 0.0105 (19) |
C6 | 0.090 (2) | 0.094 (2) | 0.0645 (17) | 0.0202 (18) | 0.0352 (16) | 0.0058 (15) |
C7 | 0.0560 (14) | 0.0641 (15) | 0.0473 (14) | −0.0055 (13) | 0.0147 (12) | 0.0061 (11) |
C8 | 0.116 (3) | 0.151 (3) | 0.080 (2) | 0.059 (3) | −0.010 (2) | 0.031 (2) |
C9 | 0.0529 (15) | 0.0782 (18) | 0.0590 (16) | −0.0160 (14) | −0.0009 (13) | 0.0180 (13) |
C10 | 0.0528 (15) | 0.0712 (17) | 0.0565 (16) | −0.0081 (13) | 0.0042 (12) | 0.0166 (13) |
C11 | 0.0611 (17) | 0.086 (2) | 0.087 (2) | 0.0102 (16) | 0.0036 (15) | 0.0235 (16) |
C14 | 0.079 (2) | 0.112 (2) | 0.0576 (17) | −0.0321 (19) | −0.0033 (15) | 0.0269 (16) |
C12A | 0.080 (4) | 0.103 (4) | 0.116 (3) | 0.015 (3) | 0.006 (3) | 0.042 (3) |
C13A | 0.070 (3) | 0.129 (5) | 0.077 (2) | −0.016 (4) | −0.020 (2) | 0.055 (3) |
C15A | 0.101 (3) | 0.131 (4) | 0.072 (3) | 0.028 (3) | 0.005 (2) | 0.034 (2) |
C13B | 0.070 (3) | 0.129 (5) | 0.077 (2) | −0.016 (4) | −0.020 (2) | 0.055 (3) |
C12B | 0.080 (4) | 0.103 (4) | 0.116 (3) | 0.015 (3) | 0.006 (3) | 0.042 (3) |
C15B | 0.101 (3) | 0.131 (4) | 0.072 (3) | 0.028 (3) | 0.005 (2) | 0.034 (2) |
O1—C2 | 1.357 (3) | C8—H8A | 0.9600 |
O1—H1 | 0.8200 | C8—H8B | 0.9600 |
O2—C3 | 1.367 (3) | C8—H8C | 0.9600 |
O2—C8 | 1.438 (3) | C9—C10 | 1.393 (4) |
N1—C7 | 1.367 (3) | C9—C14 | 1.397 (3) |
N1—C9 | 1.382 (3) | C10—C11 | 1.394 (4) |
N1—H1A | 0.9194 | C11—C12A | 1.357 (4) |
N2—C7 | 1.332 (3) | C11—H11 | 0.9300 |
N2—C10 | 1.394 (3) | C14—C13A | 1.388 (5) |
C1—C2 | 1.396 (3) | C14—H14 | 0.9300 |
C1—C6 | 1.397 (4) | C12A—C13A | 1.383 (5) |
C1—C7 | 1.453 (3) | C12A—H12A | 0.9300 |
C2—C3 | 1.399 (3) | C13A—C15A | 1.531 (4) |
C3—C4 | 1.368 (4) | C15A—H15A | 0.9600 |
C4—C5 | 1.384 (4) | C15A—H15B | 0.9600 |
C4—H4 | 0.9300 | C15A—H15C | 0.9600 |
C5—C6 | 1.366 (4) | C15B—H15G | 0.9600 |
C5—H5 | 0.9300 | C15B—H15D | 0.9600 |
C6—H6 | 0.9300 | C15B—H15E | 0.9600 |
C2—O1—H1 | 109.2 | O2—C8—H8C | 109.5 |
C3—O2—C8 | 117.7 (2) | H8A—C8—H8C | 109.5 |
C7—N1—C9 | 107.4 (2) | H8B—C8—H8C | 109.5 |
C7—N1—H1A | 123.5 | N1—C9—C10 | 105.8 (2) |
C9—N1—H1A | 129.0 | N1—C9—C14 | 132.3 (3) |
C7—N2—C10 | 105.6 (2) | C10—C9—C14 | 121.9 (3) |
C2—C1—C6 | 118.8 (2) | C9—C10—C11 | 119.8 (2) |
C2—C1—C7 | 118.8 (2) | C9—C10—N2 | 109.5 (2) |
C6—C1—C7 | 122.5 (2) | C11—C10—N2 | 130.7 (3) |
O1—C2—C1 | 123.0 (2) | C12A—C11—C10 | 117.6 (3) |
O1—C2—C3 | 117.0 (2) | C12A—C11—H11 | 121.2 |
C1—C2—C3 | 120.0 (2) | C10—C11—H11 | 121.2 |
O2—C3—C4 | 125.8 (2) | C13A—C14—C9 | 117.3 (3) |
O2—C3—C2 | 114.3 (2) | C13A—C14—H14 | 121.4 |
C4—C3—C2 | 119.9 (2) | C9—C14—H14 | 121.4 |
C3—C4—C5 | 120.3 (3) | C11—C12A—C13A | 123.6 (3) |
C3—C4—H4 | 119.9 | C11—C12A—H12A | 118.2 |
C5—C4—H4 | 119.9 | C13A—C12A—H12A | 118.2 |
C6—C5—C4 | 120.5 (3) | C12A—C13A—C14 | 119.8 (3) |
C6—C5—H5 | 119.7 | C12A—C13A—C15A | 115.3 (4) |
C4—C5—H5 | 119.7 | C14—C13A—C15A | 124.9 (4) |
C5—C6—C1 | 120.6 (3) | C13A—C15A—H15A | 109.5 |
C5—C6—H6 | 119.7 | C13A—C15A—H15B | 109.5 |
C1—C6—H6 | 119.7 | H15A—C15A—H15B | 109.5 |
N2—C7—N1 | 111.7 (2) | C13A—C15A—H15C | 109.5 |
N2—C7—C1 | 123.1 (2) | H15A—C15A—H15C | 109.5 |
N1—C7—C1 | 125.2 (2) | H15B—C15A—H15C | 109.5 |
O2—C8—H8A | 109.5 | H15G—C15B—H15D | 109.5 |
O2—C8—H8B | 109.5 | H15G—C15B—H15E | 109.5 |
H8A—C8—H8B | 109.5 | H15D—C15B—H15E | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N2 | 0.82 | 1.83 | 2.567 (2) | 148 |
N1—H1A···O2i | 0.92 | 2.54 | 3.173 (3) | 127 |
N1—H1A···O1i | 0.92 | 2.06 | 2.920 (3) | 155 |
Symmetry code: (i) x, −y+2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C15H14N2O2 |
Mr | 254.28 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 17.986 (3), 11.4452 (16), 13.4105 (19) |
β (°) | 104.216 (2) |
V (Å3) | 2676.1 (7) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.21 × 0.17 × 0.13 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.982, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6836, 2531, 1441 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.610 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.169, 1.05 |
No. of reflections | 2531 |
No. of parameters | 176 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.20, −0.23 |
Computer programs: APEX2 (Bruker, 2004), SAINT-Plus (Bruker, 2001), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N2 | 0.82 | 1.83 | 2.567 (2) | 148.4 |
N1—H1A···O2i | 0.92 | 2.54 | 3.173 (3) | 126.7 |
N1—H1A···O1i | 0.92 | 2.06 | 2.920 (3) | 154.8 |
Symmetry code: (i) x, −y+2, z+1/2. |
Acknowledgements
This work was supported by the Zhejiang Provincial Natural Science Foundation (grant No. Y4080395).
References
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Imidazole and its derivatives are an important class of heterocycle with N-donor atoms, therefore they can be excellent organic ligands to generate various complexes (Huang et al., 2004). Benzimidazoles are privileged structural units not only in the pharmaceutical industry but also in several other fields such as agricultural, electronic, and polymer chemistry (Perry et al., 1993). We report here the synthesis and crystal structure of the title compound.
The molecular structure is shown in Fig. 1. The values of the geometric parameters in the compound are normal (Savall et al., 2008) (Table 1). The benzimidazole and phenol groups are nearly coplanar, the dihedral angle between 6-methyl-1H-benzimidazole plane and 2-methoxyphenol plane is 6.9 (2)°. The compounds are linked by N—H···O hydrogen bonds [N1—H1A··· O1, N1—H1A···O2, O1—H1···N2] into a three-dimensional network structure.