metal-organic compounds
catena-Poly[[diaquanickel(II)]-μ-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylato]
aZhejiang Key Laboratory for Reactive Chemistry on Solid Surfaces, Institute of Physical Chemistry, Zhejiang Normal University, Jinhua, Zhejiang 321004, People's Republic of China, and, College of Chemistry and Life Science, Zhejiang Normal University, Jinhua 321004, Zhejiang, People's Republic of China
*Correspondence e-mail: sky51@zjnu.cn
In the 8H8O5)(H2O)2]n, the NiII cation is in a Jahn–Teller-distorted octahedral coordination environment binding to two O atoms from water molecules, the bridging O atom of the bicycloheptane unit, two carboxylate O atoms from different carboxylate groups and one carboxylate O atom from a symmetry-related bridging ligand. The is made up from layers propagating parallel to the bc plane.
of the title compound, [Ni(CExperimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2006); cell SAINT (Bruker, 2006); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809021771/at2793sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809021771/at2793Isup2.hkl
A mixture of 1 mmol norcantharidin, 1 mmol NiCl2.6H2O and 15 mL distilled water was sealed in a 25 mL Teflon-lined stainless vessel and heated at 443 K for 3 d, then cooled slowly to room temperature. The solution was filtered and block green crystals were obtained.
The H atoms bonded to C atoms were positioned geometrically and refined using a riding model [C—H = 0.97-0.98 Å, Uiso(H) = 1.2Ueq(C)]. The H atoms bonded to O atoms were located in a difference Fourier maps and refined with O—H distance restraints of 0.85 (2) and Uiso(H) = 1.5Ueq(O).
Data collection: APEX2 (Bruker, 2006); cell
SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. A view of the molecule of (I) showing the atom-labelling scheme with displacement ellipsoids drawn at the 30% probability. |
[Ni(C8H8O5)(H2O)2] | F(000) = 576 |
Mr = 278.89 | Dx = 1.898 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4375 reflections |
a = 10.9145 (2) Å | θ = 2.0–27.5° |
b = 8.6281 (2) Å | µ = 2.01 mm−1 |
c = 10.8581 (2) Å | T = 296 K |
β = 107.351 (1)° | Block, green |
V = 975.99 (3) Å3 | 0.27 × 0.20 × 0.10 mm |
Z = 4 |
Bruker APEXII area-detector diffractometer | 2213 independent reflections |
Radiation source: fine-focus sealed tube | 1961 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
ω scans | θmax = 27.5°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→14 |
Tmin = 0.618, Tmax = 0.817 | k = −11→6 |
7972 measured reflections | l = −12→14 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.022 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.032P)2 + 0.4246P] where P = (Fo2 + 2Fc2)/3 |
2213 reflections | (Δ/σ)max = 0.001 |
157 parameters | Δρmax = 0.30 e Å−3 |
6 restraints | Δρmin = −0.30 e Å−3 |
[Ni(C8H8O5)(H2O)2] | V = 975.99 (3) Å3 |
Mr = 278.89 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 10.9145 (2) Å | µ = 2.01 mm−1 |
b = 8.6281 (2) Å | T = 296 K |
c = 10.8581 (2) Å | 0.27 × 0.20 × 0.10 mm |
β = 107.351 (1)° |
Bruker APEXII area-detector diffractometer | 2213 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1961 reflections with I > 2σ(I) |
Tmin = 0.618, Tmax = 0.817 | Rint = 0.019 |
7972 measured reflections |
R[F2 > 2σ(F2)] = 0.022 | 6 restraints |
wR(F2) = 0.059 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.30 e Å−3 |
2213 reflections | Δρmin = −0.30 e Å−3 |
157 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.73787 (15) | −0.1019 (2) | 0.71021 (15) | 0.0214 (3) | |
H1A | 0.7710 | −0.2053 | 0.7005 | 0.026* | |
C2 | 0.75289 (16) | 0.0067 (2) | 0.60404 (16) | 0.0234 (3) | |
H2A | 0.6816 | 0.0008 | 0.5240 | 0.028* | |
C3 | 0.88388 (17) | −0.0131 (2) | 0.58426 (19) | 0.0329 (4) | |
H3A | 0.8888 | 0.0402 | 0.5072 | 0.039* | |
H3B | 0.9048 | −0.1216 | 0.5789 | 0.039* | |
C4 | 0.97214 (18) | 0.0632 (3) | 0.7078 (2) | 0.0375 (5) | |
H4A | 1.0324 | −0.0110 | 0.7599 | 0.045* | |
H4B | 1.0192 | 0.1498 | 0.6872 | 0.045* | |
C5 | 0.87589 (15) | 0.1175 (2) | 0.77610 (17) | 0.0265 (4) | |
H5A | 0.9073 | 0.2034 | 0.8363 | 0.032* | |
C6 | 0.82547 (16) | −0.0207 (2) | 0.83620 (16) | 0.0234 (3) | |
H6A | 0.8966 | −0.0891 | 0.8805 | 0.028* | |
C7 | 0.59962 (14) | −0.1119 (2) | 0.71114 (15) | 0.0202 (3) | |
C8 | 0.75095 (16) | 0.0292 (2) | 0.92900 (15) | 0.0242 (4) | |
O1W | 0.69190 (12) | 0.44064 (15) | 0.74994 (13) | 0.0289 (3) | |
H1WA | 0.711 (2) | 0.473 (3) | 0.6846 (18) | 0.043* | |
H1WB | 0.643 (2) | 0.505 (2) | 0.765 (2) | 0.043* | |
O1 | 0.56501 (12) | −0.23749 (14) | 0.74852 (12) | 0.0244 (3) | |
O2W | 0.51314 (14) | 0.29376 (19) | 0.53124 (13) | 0.0383 (3) | |
H2WA | 0.557 (2) | 0.322 (3) | 0.486 (2) | 0.057* | |
H2WB | 0.4472 (17) | 0.342 (3) | 0.512 (2) | 0.057* | |
O2 | 0.75780 (15) | −0.05131 (17) | 1.02529 (12) | 0.0389 (3) | |
O3 | 0.52811 (11) | 0.00446 (14) | 0.67765 (13) | 0.0272 (3) | |
O4 | 0.68270 (12) | 0.15134 (16) | 0.89954 (11) | 0.0302 (3) | |
O5 | 0.76514 (11) | 0.15762 (14) | 0.66735 (11) | 0.0236 (3) | |
Ni1 | 0.601796 (19) | 0.22532 (2) | 0.714683 (19) | 0.01937 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0213 (8) | 0.0212 (8) | 0.0245 (8) | 0.0010 (6) | 0.0109 (6) | −0.0017 (6) |
C2 | 0.0216 (8) | 0.0296 (9) | 0.0221 (8) | −0.0007 (7) | 0.0111 (6) | −0.0032 (7) |
C3 | 0.0287 (9) | 0.0413 (11) | 0.0364 (10) | 0.0019 (8) | 0.0217 (8) | −0.0008 (8) |
C4 | 0.0218 (9) | 0.0503 (13) | 0.0452 (11) | −0.0038 (8) | 0.0172 (8) | 0.0003 (10) |
C5 | 0.0196 (8) | 0.0318 (10) | 0.0285 (9) | −0.0051 (7) | 0.0080 (7) | −0.0037 (7) |
C6 | 0.0194 (7) | 0.0285 (9) | 0.0225 (8) | 0.0031 (7) | 0.0066 (6) | 0.0014 (7) |
C7 | 0.0218 (8) | 0.0217 (8) | 0.0194 (8) | −0.0035 (6) | 0.0098 (6) | −0.0058 (6) |
C8 | 0.0240 (8) | 0.0299 (9) | 0.0181 (8) | −0.0004 (7) | 0.0053 (6) | −0.0013 (7) |
O1W | 0.0290 (7) | 0.0249 (7) | 0.0357 (7) | 0.0008 (5) | 0.0145 (6) | −0.0014 (5) |
O1 | 0.0236 (6) | 0.0228 (6) | 0.0306 (6) | −0.0026 (5) | 0.0138 (5) | 0.0003 (5) |
O2W | 0.0377 (8) | 0.0566 (10) | 0.0238 (7) | 0.0112 (7) | 0.0144 (6) | 0.0103 (6) |
O2 | 0.0555 (9) | 0.0399 (8) | 0.0258 (7) | 0.0123 (7) | 0.0187 (6) | 0.0097 (6) |
O3 | 0.0220 (6) | 0.0209 (6) | 0.0421 (7) | −0.0007 (5) | 0.0145 (5) | −0.0011 (5) |
O4 | 0.0364 (7) | 0.0357 (8) | 0.0218 (6) | 0.0119 (6) | 0.0137 (5) | 0.0046 (5) |
O5 | 0.0234 (6) | 0.0249 (6) | 0.0254 (6) | 0.0001 (5) | 0.0118 (5) | 0.0019 (5) |
Ni1 | 0.02056 (12) | 0.02009 (13) | 0.01992 (12) | 0.00083 (8) | 0.00979 (9) | 0.00170 (8) |
C1—C7 | 1.514 (2) | C6—H6A | 0.9800 |
C1—C2 | 1.532 (2) | C7—O1 | 1.254 (2) |
C1—C6 | 1.580 (2) | C7—O3 | 1.257 (2) |
C1—H1A | 0.9800 | C8—O2 | 1.239 (2) |
C2—O5 | 1.460 (2) | C8—O4 | 1.275 (2) |
C2—C3 | 1.517 (2) | O1W—Ni1 | 2.0834 (13) |
C2—H2A | 0.9800 | O1W—H1WA | 0.841 (15) |
C3—C4 | 1.546 (3) | O1W—H1WB | 0.822 (15) |
C3—H3A | 0.9700 | O1—Ni1i | 2.0027 (12) |
C3—H3B | 0.9700 | O2W—Ni1 | 2.0255 (13) |
C4—C5 | 1.529 (2) | O2W—H2WA | 0.824 (16) |
C4—H4A | 0.9700 | O2W—H2WB | 0.802 (16) |
C4—H4B | 0.9700 | O3—Ni1 | 2.0608 (12) |
C5—O5 | 1.457 (2) | O4—Ni1 | 2.0393 (12) |
C5—C6 | 1.538 (2) | O5—Ni1 | 2.0809 (11) |
C5—H5A | 0.9800 | Ni1—O1ii | 2.0027 (12) |
C6—C8 | 1.533 (2) | ||
C7—C1—C2 | 111.72 (13) | C1—C6—H6A | 110.1 |
C7—C1—C6 | 111.48 (13) | O1—C7—O3 | 124.24 (14) |
C2—C1—C6 | 101.96 (13) | O1—C7—C1 | 116.61 (15) |
C7—C1—H1A | 110.5 | O3—C7—C1 | 119.13 (15) |
C2—C1—H1A | 110.5 | O2—C8—O4 | 123.98 (16) |
C6—C1—H1A | 110.5 | O2—C8—C6 | 119.16 (16) |
O5—C2—C3 | 102.07 (14) | O4—C8—C6 | 116.85 (14) |
O5—C2—C1 | 101.93 (12) | Ni1—O1W—H1WA | 110.9 (17) |
C3—C2—C1 | 110.77 (14) | Ni1—O1W—H1WB | 109.8 (17) |
O5—C2—H2A | 113.6 | H1WA—O1W—H1WB | 106.5 (19) |
C3—C2—H2A | 113.6 | C7—O1—Ni1i | 125.62 (11) |
C1—C2—H2A | 113.6 | Ni1—O2W—H2WA | 119.0 (17) |
C2—C3—C4 | 101.47 (14) | Ni1—O2W—H2WB | 122.3 (17) |
C2—C3—H3A | 111.5 | H2WA—O2W—H2WB | 109 (2) |
C4—C3—H3A | 111.5 | C7—O3—Ni1 | 120.63 (11) |
C2—C3—H3B | 111.5 | C8—O4—Ni1 | 123.69 (11) |
C4—C3—H3B | 111.5 | C5—O5—C2 | 96.15 (13) |
H3A—C3—H3B | 109.3 | C5—O5—Ni1 | 115.54 (9) |
C5—C4—C3 | 102.17 (14) | C2—O5—Ni1 | 113.69 (9) |
C5—C4—H4A | 111.3 | O1ii—Ni1—O2W | 87.33 (6) |
C3—C4—H4A | 111.3 | O1ii—Ni1—O4 | 90.36 (5) |
C5—C4—H4B | 111.3 | O2W—Ni1—O4 | 177.14 (6) |
C3—C4—H4B | 111.3 | O1ii—Ni1—O3 | 82.07 (5) |
H4A—C4—H4B | 109.2 | O2W—Ni1—O3 | 91.92 (6) |
O5—C5—C4 | 101.75 (14) | O4—Ni1—O3 | 86.09 (5) |
O5—C5—C6 | 102.27 (13) | O1ii—Ni1—O5 | 172.30 (5) |
C4—C5—C6 | 110.67 (16) | O2W—Ni1—O5 | 91.84 (5) |
O5—C5—H5A | 113.7 | O4—Ni1—O5 | 90.22 (5) |
C4—C5—H5A | 113.7 | O3—Ni1—O5 | 90.31 (5) |
C6—C5—H5A | 113.7 | O1ii—Ni1—O1W | 103.17 (5) |
C8—C6—C5 | 112.87 (15) | O2W—Ni1—O1W | 88.95 (6) |
C8—C6—C1 | 113.00 (13) | O4—Ni1—O1W | 93.22 (5) |
C5—C6—C1 | 100.21 (13) | O3—Ni1—O1W | 174.73 (5) |
C8—C6—H6A | 110.1 | O5—Ni1—O1W | 84.46 (5) |
C5—C6—H6A | 110.1 | ||
C7—C1—C2—O5 | 85.11 (15) | C6—C8—O4—Ni1 | 28.8 (2) |
C6—C1—C2—O5 | −34.06 (14) | C4—C5—O5—C2 | 56.04 (15) |
C7—C1—C2—C3 | −166.92 (14) | C6—C5—O5—C2 | −58.43 (14) |
C6—C1—C2—C3 | 73.92 (16) | C4—C5—O5—Ni1 | 176.00 (11) |
O5—C2—C3—C4 | 35.96 (17) | C6—C5—O5—Ni1 | 61.53 (14) |
C1—C2—C3—C4 | −71.93 (18) | C3—C2—O5—C5 | −57.44 (14) |
C2—C3—C4—C5 | −1.3 (2) | C1—C2—O5—C5 | 57.12 (13) |
C3—C4—C5—O5 | −33.65 (19) | C3—C2—O5—Ni1 | −178.84 (10) |
C3—C4—C5—C6 | 74.44 (18) | C1—C2—O5—Ni1 | −64.27 (13) |
O5—C5—C6—C8 | −84.19 (16) | C8—O4—Ni1—O1ii | 133.87 (14) |
C4—C5—C6—C8 | 168.06 (15) | C8—O4—Ni1—O2W | 97.8 (11) |
O5—C5—C6—C1 | 36.27 (15) | C8—O4—Ni1—O3 | 51.85 (14) |
C4—C5—C6—C1 | −71.48 (16) | C8—O4—Ni1—O5 | −38.45 (14) |
C7—C1—C6—C8 | −0.2 (2) | C8—O4—Ni1—O1W | −122.91 (14) |
C2—C1—C6—C8 | 119.17 (15) | C7—O3—Ni1—O1ii | −141.13 (13) |
C7—C1—C6—C5 | −120.54 (14) | C7—O3—Ni1—O2W | 131.83 (12) |
C2—C1—C6—C5 | −1.20 (15) | C7—O3—Ni1—O4 | −50.22 (12) |
C2—C1—C7—O1 | 149.60 (15) | C7—O3—Ni1—O5 | 39.98 (12) |
C6—C1—C7—O1 | −97.04 (17) | C7—O3—Ni1—O1W | 32.4 (6) |
C2—C1—C7—O3 | −31.8 (2) | C5—O5—Ni1—O1ii | −105.7 (4) |
C6—C1—C7—O3 | 81.59 (18) | C2—O5—Ni1—O1ii | 4.1 (4) |
C5—C6—C8—O2 | −145.66 (17) | C5—O5—Ni1—O2W | 170.59 (12) |
C1—C6—C8—O2 | 101.50 (19) | C2—O5—Ni1—O2W | −79.56 (11) |
C5—C6—C8—O4 | 35.8 (2) | C5—O5—Ni1—O4 | −11.38 (12) |
C1—C6—C8—O4 | −77.0 (2) | C2—O5—Ni1—O4 | 98.46 (11) |
O3—C7—O1—Ni1i | −8.3 (2) | C5—O5—Ni1—O3 | −97.47 (11) |
C1—C7—O1—Ni1i | 170.29 (10) | C2—O5—Ni1—O3 | 12.37 (10) |
O1—C7—O3—Ni1 | 145.58 (13) | C5—O5—Ni1—O1W | 81.83 (12) |
C1—C7—O3—Ni1 | −32.95 (18) | C2—O5—Ni1—O1W | −168.33 (11) |
O2—C8—O4—Ni1 | −149.69 (15) |
Symmetry codes: (i) −x+1, y−1/2, −z+3/2; (ii) −x+1, y+1/2, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O2iii | 0.84 (2) | 2.06 (2) | 2.9027 (19) | 180 (3) |
O1W—H1WB···O3ii | 0.82 (2) | 2.14 (2) | 2.7953 (17) | 137 (2) |
O1W—H1WB···O1iv | 0.82 (2) | 2.37 (2) | 3.1013 (17) | 149 (2) |
O2W—H2WA···O4iii | 0.82 (2) | 1.89 (2) | 2.6967 (19) | 167 (3) |
O2W—H2WB···O2ii | 0.80 (2) | 2.34 (2) | 3.135 (2) | 170 (2) |
Symmetry codes: (ii) −x+1, y+1/2, −z+3/2; (iii) x, −y+1/2, z−1/2; (iv) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C8H8O5)(H2O)2] |
Mr | 278.89 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 10.9145 (2), 8.6281 (2), 10.8581 (2) |
β (°) | 107.351 (1) |
V (Å3) | 975.99 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.01 |
Crystal size (mm) | 0.27 × 0.20 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.618, 0.817 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7972, 2213, 1961 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.022, 0.059, 1.02 |
No. of reflections | 2213 |
No. of parameters | 157 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.30, −0.30 |
Computer programs: APEX2 (Bruker, 2006), SAINT (Bruker, 2006), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O2i | 0.841 (15) | 2.062 (15) | 2.9027 (19) | 180 (3) |
O1W—H1WB···O3ii | 0.822 (15) | 2.135 (18) | 2.7953 (17) | 137 (2) |
O1W—H1WB···O1iii | 0.822 (15) | 2.366 (19) | 3.1013 (17) | 149 (2) |
O2W—H2WA···O4i | 0.824 (16) | 1.888 (16) | 2.6967 (19) | 167 (3) |
O2W—H2WB···O2ii | 0.802 (16) | 2.341 (16) | 3.135 (2) | 170 (2) |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, y+1/2, −z+3/2; (iii) x, y+1, z. |
Acknowledgements
The authors thank the Natural Science Foundation of Zhejiang Province, China (grant No. Y407301) for financial support.
References
Bruker (2006). SAINT and APEX2. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wang, Y.-Y., Hu, R.-D. & Wang, Y.-J. (2009). Acta Cryst. E65, m169. Web of Science CSD CrossRef IUCr Journals Google Scholar
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The title compound, (I), is isostructural with the Cu(II) analogue (Wang et al., 2009). In the title compound, each NiII ion is six-coordinated by two oxygen atoms from water, one bridge oxygen, two carboxylate oxygen atoms in two different carboxylate groups and one carboxylate oxygen atom in another asymmetric unit. O1, O1W, O5 and O3 lie in the equatorial plane with the torsion angle -1.121 (47)°. O2W and carboxylate oxygen atom O4 are in the axial positions. The bond angle of O2W—Ni1—O4 is 177.144 (52)°, so it forms a distorted octahedral. Owing to the binding of the bridge oxygen atom with Ni, two six-membered rings(Ni1/O4/C8/C6/C5/O5 and Ni1/O3/C7/C1/C2/O5) are created. In addition, a seven-membered ring (Ni1/O3/C7/C1/C6/C8/O4) is formed because of the coordination of carboxylate oxygen atoms O3 and O4. What's more, intermolecular O—H···O hydrogen bonds of the complex make the crystal structure more stable (Table 1).