organic compounds
2-Methoxy-6-(6-methyl-1H-benzimidazol-2-yl)phenol
aSchool of Chemical Science, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, and bX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
*Correspondence e-mail: hkfun@usm.my
In the title molecule, C15H14N2O2, the substituted benzene ring forms a dihedral angle of 4.15 (1)° with the benzimidazole ring system. An intramolecular O—H⋯N hydrogen bond generates an S(6) ring motif. In the solid state, molecules are linked into chains along the [001] via intermolecular bifurcated N—H⋯(O,O) hydrogen bonds, which generate R12(5) ring motifs. The crystal packing is also consolidated by C—H⋯π interactions, and π–π stacking interactions between the imidazole and substituted benzene rings [centroid–centroid distance = 3.5746 (13) Å]. The methyl group attached to the benzimidazole ring system is disordered over two positions with occupancies of 0.587 (6) and 0.413 (6), suggesting 180° rotational disorder for the benzimidazole group.
Related literature
For the biological activity of benzimidazole derivatives, see: Minoura et al. (2004); Pawar et al. (2004); Tomei et al. (2003); Rao et al. (2003); Demirayak et al. (2002). For related structures, see: Eltayeb et al. (2007a,b,c); Yeap et al. (2009). For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809022478/ci2825sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809022478/ci2825Isup2.hkl
To a solution of 4-methyl-1,2-phenylenediamine (0.244 g, 2 mmol) in ethanol (30 ml) was added 3-methoxysalicylaldehyde (0.604 g, 4 mmol). The mixture was refluxed with stirring for half an hour. The resultant red solution was filtered. The red powder obtained was dissolved in dichloromethane. Crystals suitable for XRD were formed after several days of slow evaporation of solvent at room temperature.
Atoms H1O and H1N were located in a difference Fourier map and refined freely. The remaining H atoms were positioned geometrically and refined using a riding model, with C-H = 0.93 or 0.96 Å and Uiso(H) = 1.2 or 1.5 Ueq(C). A rotating-group model was applied for the methyl groups. The methyl group attached to the benzimidazole ring system is disordered over two positions with refined site-occupancies of 0.587 (6) and 0.413 (6). The Uij components of the atom C3 were approximated to isotropic behaviour.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C15H14N2O2 | Dx = 1.344 Mg m−3 |
Mr = 254.28 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P42/n | Cell parameters from 9054 reflections |
Hall symbol: -P 4bc | θ = 2.2–29.6° |
a = 14.4118 (2) Å | µ = 0.09 mm−1 |
c = 12.0995 (2) Å | T = 100 K |
V = 2513.07 (6) Å3 | Block, yellow |
Z = 8 | 0.35 × 0.27 × 0.24 mm |
F(000) = 1072 |
Bruker SMART APEXII CCD area-detector diffractometer | 2215 independent reflections |
Radiation source: fine-focus sealed tube | 1725 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ϕ and ω scans | θmax = 25.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −17→16 |
Tmin = 0.969, Tmax = 0.978 | k = −17→17 |
28200 measured reflections | l = −14→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.054 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.156 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0696P)2 + 1.1514P] where P = (Fo2 + 2Fc2)/3 |
2215 reflections | (Δ/σ)max = 0.001 |
193 parameters | Δρmax = 0.29 e Å−3 |
6 restraints | Δρmin = −0.17 e Å−3 |
C15H14N2O2 | Z = 8 |
Mr = 254.28 | Mo Kα radiation |
Tetragonal, P42/n | µ = 0.09 mm−1 |
a = 14.4118 (2) Å | T = 100 K |
c = 12.0995 (2) Å | 0.35 × 0.27 × 0.24 mm |
V = 2513.07 (6) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 2215 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1725 reflections with I > 2σ(I) |
Tmin = 0.969, Tmax = 0.978 | Rint = 0.033 |
28200 measured reflections |
R[F2 > 2σ(F2)] = 0.054 | 6 restraints |
wR(F2) = 0.156 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.29 e Å−3 |
2215 reflections | Δρmin = −0.17 e Å−3 |
193 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.63382 (12) | 0.20396 (13) | −0.12954 (12) | 0.0575 (5) | |
H1O | 0.632 (2) | 0.268 (2) | −0.104 (3) | 0.094 (10)* | |
O2 | 0.63393 (12) | 0.02461 (12) | −0.12218 (13) | 0.0641 (5) | |
N1 | 0.62805 (13) | 0.37806 (15) | 0.14723 (17) | 0.0556 (5) | |
H1N | 0.6438 (18) | 0.3647 (18) | 0.219 (3) | 0.077 (8)* | |
N2 | 0.62434 (13) | 0.36357 (13) | −0.03521 (15) | 0.0506 (5) | |
C1 | 0.62626 (15) | 0.46707 (17) | 0.1047 (2) | 0.0579 (6) | |
C2 | 0.62707 (18) | 0.5541 (2) | 0.1545 (3) | 0.0726 (8) | |
H2 | 0.6299 | 0.5608 | 0.2309 | 0.087* | |
C3 | 0.62340 (18) | 0.63115 (19) | 0.0839 (3) | 0.0753 (8) | |
H3 | 0.6235 | 0.6906 | 0.1139 | 0.090* | 0.413 (6) |
C4 | 0.6197 (2) | 0.6204 (2) | −0.0292 (3) | 0.0787 (9) | |
H4 | 0.6168 | 0.6729 | −0.0738 | 0.094* | 0.587 (6) |
C5 | 0.62015 (19) | 0.53499 (19) | −0.0773 (3) | 0.0730 (8) | |
H5 | 0.6182 | 0.5289 | −0.1538 | 0.088* | |
C6 | 0.62354 (15) | 0.45686 (17) | −0.0092 (2) | 0.0540 (6) | |
C7 | 0.62715 (14) | 0.31865 (16) | 0.06068 (17) | 0.0469 (6) | |
C8 | 0.62766 (14) | 0.21826 (16) | 0.06973 (17) | 0.0456 (5) | |
C9 | 0.63060 (14) | 0.16508 (16) | −0.02796 (16) | 0.0456 (5) | |
C10 | 0.63048 (15) | 0.06902 (17) | −0.02064 (18) | 0.0511 (6) | |
C11 | 0.62696 (16) | 0.02486 (17) | 0.0801 (2) | 0.0559 (6) | |
H11 | 0.6263 | −0.0396 | 0.0838 | 0.067* | |
C12 | 0.62437 (16) | 0.07732 (17) | 0.17613 (19) | 0.0572 (6) | |
H12 | 0.6227 | 0.0478 | 0.2444 | 0.069* | |
C13 | 0.62424 (15) | 0.17223 (16) | 0.17120 (18) | 0.0513 (6) | |
H13 | 0.6218 | 0.2065 | 0.2363 | 0.062* | |
C14 | 0.6320 (2) | −0.07360 (18) | −0.1201 (2) | 0.0739 (8) | |
H14A | 0.6353 | −0.0970 | −0.1942 | 0.111* | |
H14B | 0.5754 | −0.0942 | −0.0862 | 0.111* | |
H14C | 0.6840 | −0.0962 | −0.0784 | 0.111* | |
C15 | 0.6189 (3) | 0.7303 (3) | 0.1250 (4) | 0.0672 (15) | 0.587 (6) |
H15A | 0.6664 | 0.7664 | 0.0896 | 0.101* | 0.587 (6) |
H15B | 0.6282 | 0.7314 | 0.2035 | 0.101* | 0.587 (6) |
H15C | 0.5592 | 0.7561 | 0.1078 | 0.101* | 0.587 (6) |
C15A | 0.6243 (6) | 0.7101 (5) | −0.0739 (9) | 0.106 (3) | 0.413 (6) |
H15D | 0.5763 | 0.7175 | −0.1282 | 0.160* | 0.413 (6) |
H15E | 0.6837 | 0.7191 | −0.1080 | 0.160* | 0.413 (6) |
H15F | 0.6159 | 0.7549 | −0.0161 | 0.160* | 0.413 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0754 (11) | 0.0642 (11) | 0.0329 (9) | 0.0026 (8) | 0.0016 (7) | 0.0016 (7) |
O2 | 0.0800 (12) | 0.0649 (11) | 0.0474 (10) | 0.0083 (9) | −0.0050 (8) | −0.0113 (8) |
N1 | 0.0574 (12) | 0.0687 (14) | 0.0407 (11) | 0.0040 (10) | −0.0037 (9) | −0.0075 (10) |
N2 | 0.0537 (12) | 0.0567 (12) | 0.0415 (11) | 0.0009 (9) | 0.0024 (8) | 0.0063 (9) |
C1 | 0.0444 (13) | 0.0568 (15) | 0.0725 (17) | 0.0022 (10) | 0.0038 (11) | −0.0055 (12) |
C2 | 0.0608 (16) | 0.079 (2) | 0.0781 (18) | 0.0009 (13) | 0.0067 (14) | −0.0209 (16) |
C3 | 0.0564 (15) | 0.0563 (16) | 0.113 (2) | −0.0023 (12) | 0.0144 (15) | −0.0108 (15) |
C4 | 0.0736 (19) | 0.071 (2) | 0.092 (2) | −0.0012 (14) | 0.0211 (16) | 0.0047 (16) |
C5 | 0.0750 (18) | 0.0601 (17) | 0.0837 (19) | 0.0024 (13) | 0.0163 (15) | 0.0105 (15) |
C6 | 0.0490 (13) | 0.0562 (15) | 0.0568 (15) | −0.0009 (10) | 0.0053 (11) | 0.0012 (11) |
C7 | 0.0393 (12) | 0.0602 (14) | 0.0413 (13) | −0.0005 (10) | −0.0004 (9) | −0.0022 (10) |
C8 | 0.0388 (11) | 0.0593 (14) | 0.0387 (12) | 0.0020 (9) | −0.0018 (9) | 0.0024 (10) |
C9 | 0.0405 (12) | 0.0641 (15) | 0.0323 (11) | 0.0027 (10) | 0.0007 (9) | 0.0040 (10) |
C10 | 0.0476 (13) | 0.0619 (15) | 0.0438 (13) | 0.0049 (10) | −0.0056 (10) | −0.0051 (10) |
C11 | 0.0579 (14) | 0.0548 (14) | 0.0549 (15) | 0.0010 (11) | −0.0065 (11) | 0.0047 (11) |
C12 | 0.0632 (15) | 0.0655 (16) | 0.0429 (13) | 0.0008 (12) | −0.0042 (11) | 0.0075 (11) |
C13 | 0.0563 (14) | 0.0637 (15) | 0.0338 (12) | 0.0018 (11) | −0.0030 (10) | 0.0008 (10) |
C14 | 0.085 (2) | 0.0676 (18) | 0.0689 (18) | 0.0108 (14) | −0.0186 (15) | −0.0187 (14) |
C15 | 0.066 (3) | 0.061 (3) | 0.074 (3) | 0.001 (2) | 0.005 (2) | −0.009 (2) |
C15A | 0.102 (6) | 0.056 (5) | 0.162 (9) | 0.003 (4) | 0.001 (6) | 0.031 (5) |
O1—C9 | 1.352 (2) | C5—H5 | 0.93 |
O1—H1O | 0.97 (3) | C7—C8 | 1.451 (3) |
O2—C10 | 1.386 (3) | C8—C13 | 1.396 (3) |
O2—C14 | 1.416 (3) | C8—C9 | 1.409 (3) |
N1—C7 | 1.353 (3) | C9—C10 | 1.387 (3) |
N1—C1 | 1.382 (3) | C10—C11 | 1.376 (3) |
N1—H1N | 0.92 (3) | C11—C12 | 1.387 (3) |
N2—C7 | 1.329 (3) | C11—H11 | 0.93 |
N2—C6 | 1.381 (3) | C12—C13 | 1.369 (3) |
C1—C6 | 1.387 (4) | C12—H12 | 0.93 |
C1—C2 | 1.392 (4) | C13—H13 | 0.93 |
C2—C3 | 1.402 (4) | C14—H14A | 0.96 |
C2—H2 | 0.93 | C14—H14B | 0.96 |
C3—C4 | 1.378 (5) | C14—H14C | 0.96 |
C3—C15 | 1.515 (5) | C15—H15A | 0.96 |
C3—H3 | 0.93 | C15—H15B | 0.96 |
C4—C5 | 1.362 (4) | C15—H15C | 0.96 |
C4—C15A | 1.403 (8) | C15A—H15D | 0.96 |
C4—H4 | 0.93 | C15A—H15E | 0.96 |
C5—C6 | 1.396 (4) | C15A—H15F | 0.96 |
C9—O1—H1O | 95.9 (19) | C13—C8—C7 | 122.7 (2) |
C10—O2—C14 | 116.42 (19) | C9—C8—C7 | 118.62 (19) |
C7—N1—C1 | 107.4 (2) | O1—C9—C10 | 118.15 (19) |
C7—N1—H1N | 127.0 (17) | O1—C9—C8 | 122.6 (2) |
C1—N1—H1N | 123.5 (16) | C10—C9—C8 | 119.28 (19) |
C7—N2—C6 | 106.02 (19) | C11—C10—O2 | 125.0 (2) |
N1—C1—C6 | 105.8 (2) | C11—C10—C9 | 121.2 (2) |
N1—C1—C2 | 132.5 (3) | O2—C10—C9 | 113.8 (2) |
C6—C1—C2 | 121.8 (3) | C10—C11—C12 | 119.4 (2) |
C1—C2—C3 | 116.7 (3) | C10—C11—H11 | 120.3 |
C1—C2—H2 | 121.6 | C12—C11—H11 | 120.3 |
C3—C2—H2 | 121.6 | C13—C12—C11 | 120.5 (2) |
C4—C3—C2 | 121.2 (3) | C13—C12—H12 | 119.7 |
C4—C3—C15 | 115.5 (3) | C11—C12—H12 | 119.7 |
C2—C3—C15 | 123.3 (3) | C12—C13—C8 | 120.8 (2) |
C4—C3—H3 | 119.4 | C12—C13—H13 | 119.6 |
C2—C3—H3 | 119.4 | C8—C13—H13 | 119.6 |
C5—C4—C3 | 121.7 (3) | O2—C14—H14A | 109.5 |
C5—C4—C15A | 131.9 (5) | O2—C14—H14B | 109.5 |
C3—C4—C15A | 106.1 (5) | H14A—C14—H14B | 109.5 |
C5—C4—H4 | 119.1 | O2—C14—H14C | 109.5 |
C3—C4—H4 | 119.1 | H14A—C14—H14C | 109.5 |
C4—C5—C6 | 118.5 (3) | H14B—C14—H14C | 109.5 |
C4—C5—H5 | 120.8 | C3—C15—H15A | 109.5 |
C6—C5—H5 | 120.8 | C3—C15—H15B | 109.5 |
N2—C6—C1 | 109.2 (2) | C3—C15—H15C | 109.5 |
N2—C6—C5 | 130.7 (2) | C4—C15A—H15D | 109.5 |
C1—C6—C5 | 120.1 (2) | C4—C15A—H15E | 109.5 |
N2—C7—N1 | 111.6 (2) | H15D—C15A—H15E | 109.5 |
N2—C7—C8 | 123.48 (19) | C4—C15A—H15F | 109.5 |
N1—C7—C8 | 124.9 (2) | H15D—C15A—H15F | 109.5 |
C13—C8—C9 | 118.7 (2) | H15E—C15A—H15F | 109.5 |
C7—N1—C1—C6 | 0.5 (2) | C1—N1—C7—N2 | −0.4 (2) |
C7—N1—C1—C2 | −179.3 (2) | C1—N1—C7—C8 | −179.45 (19) |
N1—C1—C2—C3 | −179.2 (2) | N2—C7—C8—C13 | −175.5 (2) |
C6—C1—C2—C3 | 1.1 (4) | N1—C7—C8—C13 | 3.5 (3) |
C1—C2—C3—C4 | −0.4 (4) | N2—C7—C8—C9 | 3.7 (3) |
C1—C2—C3—C15 | 176.8 (3) | N1—C7—C8—C9 | −177.3 (2) |
C2—C3—C4—C5 | −0.5 (4) | C13—C8—C9—O1 | 179.87 (19) |
C15—C3—C4—C5 | −177.9 (3) | C7—C8—C9—O1 | 0.6 (3) |
C2—C3—C4—C15A | −175.4 (4) | C13—C8—C9—C10 | −0.3 (3) |
C15—C3—C4—C15A | 7.2 (5) | C7—C8—C9—C10 | −179.56 (19) |
C3—C4—C5—C6 | 0.6 (4) | C14—O2—C10—C11 | 1.1 (3) |
C15A—C4—C5—C6 | 174.0 (5) | C14—O2—C10—C9 | −178.7 (2) |
C7—N2—C6—C1 | 0.2 (2) | O1—C9—C10—C11 | −179.8 (2) |
C7—N2—C6—C5 | −179.4 (2) | C8—C9—C10—C11 | 0.4 (3) |
N1—C1—C6—N2 | −0.4 (3) | O1—C9—C10—O2 | 0.1 (3) |
C2—C1—C6—N2 | 179.4 (2) | C8—C9—C10—O2 | −179.74 (18) |
N1—C1—C6—C5 | 179.3 (2) | O2—C10—C11—C12 | 179.6 (2) |
C2—C1—C6—C5 | −0.9 (4) | C9—C10—C11—C12 | −0.6 (3) |
C4—C5—C6—N2 | 179.7 (2) | C10—C11—C12—C13 | 0.7 (3) |
C4—C5—C6—C1 | 0.1 (4) | C11—C12—C13—C8 | −0.7 (3) |
C6—N2—C7—N1 | 0.1 (2) | C9—C8—C13—C12 | 0.4 (3) |
C6—N2—C7—C8 | 179.20 (19) | C7—C8—C13—C12 | 179.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.92 (4) | 2.03 (3) | 2.919 (3) | 164 (2) |
N1—H1N···O2i | 0.92 (4) | 2.58 (3) | 3.168 (3) | 123 (2) |
O1—H1O···N2 | 0.97 (3) | 1.61 (3) | 2.572 (3) | 167 (3) |
C14—H14B···Cg1ii | 0.96 | 2.95 | 3.840 (3) | 154 |
Symmetry codes: (i) y+1/2, −x+1, z+1/2; (ii) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | C15H14N2O2 |
Mr | 254.28 |
Crystal system, space group | Tetragonal, P42/n |
Temperature (K) | 100 |
a, c (Å) | 14.4118 (2), 12.0995 (2) |
V (Å3) | 2513.07 (6) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.35 × 0.27 × 0.24 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.969, 0.978 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 28200, 2215, 1725 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.054, 0.156, 1.08 |
No. of reflections | 2215 |
No. of parameters | 193 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.29, −0.17 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.92 (4) | 2.03 (3) | 2.919 (3) | 164 (2) |
N1—H1N···O2i | 0.92 (4) | 2.58 (3) | 3.168 (3) | 123 (2) |
O1—H1O···N2 | 0.97 (3) | 1.61 (3) | 2.572 (3) | 167 (3) |
C14—H14B···Cg1ii | 0.96 | 2.95 | 3.840 (3) | 154 |
Symmetry codes: (i) y+1/2, −x+1, z+1/2; (ii) −x+1, −y, −z. |
Acknowledgements
The authors thank the Malaysian Government, the Ministry of Science, Technology and Innovation (MOSTI) and Universiti Sains Malaysia (USM) for the E-Science Fund and RU research grants (Nos. PKIMIA/613308, PKIMIA/815002, and PKIMIA/811120). HKF and CKQ thank USM for a Research University Golden Goose grant (No. 1001/PFIZIK/811012). CKQ thanks USM for a research fellowship. The International University of Africa (Sudan) is acknowledged for providing study leave to NEE.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The synthesis of benzimidazoles has received much attention owing to the varied biological activity such as antidiabetic (Minoura et al., 2004), antimicrobial, antifungal (Pawar et al., 2004), antiviral (Tomei et al., 2003), antiHIV (Rao et al., 2003), and anticancer (Demirayak et al., 2002) properties exhibited by a number of derivatives of these compounds. Previously we reported crystal structures of 4-allyl-2-[1-(5-allyl-2-hydroxy-3-methoxybenzyl)-1H-benzimidazol-2-yl]-6- methoxyphenol (Eltayeb et al., 2007a), 2-(2-methoxynaphthalen-1-yl)-1- [(2-methoxynaphthalen-1-yl)methyl]-1H-benzimidazole (Eltayeb et al., 2007b) and 2-(benzimidazol-2-yl)-6-methoxyphenol (Eltayeb et al., 2007c). Owing to the biological importance of the attached benzimidazole ring system, we report here the single-crystal X-ray diffraction study of 2-methoxy-6-(6-methyl-1H-benzimidazol-2-yl)phenol.
The bond lengths (Allen et al., 1987) and angles in the title molecule (Fig. 1) are normal and are comparable to those observed in a closely related structure (Yeap et al., 2009). The dihedral angle between the C8-C13 and N1/N2/C1-C7 rings is 4.15 (1)°. The molecular structure is stabilized by an intramolecular O1—H1O···N2 hydrogen bond which generates an S(6) ring motif (Bernstein et al., 1995).
In the solid state, the molecules are linked via intermolecular N1—H1N···O1 and N1—H1N···O2 bifurcated donor bonds into chains along the [001] (Fig. 2). These hydrogen bonds form an R12(5) ring motif. The crystal packing is consolidated by C—H···π (Table 1) interactions involving the C8-C13 benzene ring, and π–π stacking interactions between the C8—C13 (centroid Cg1) ring at (3/2-x, 1/2-y, z) and the N1/C1/C6/N2/C7 (centroid Cg2) ring at (x, y, z), with a Cg1···Cg2 distance of 3.5746 (13) Å.