organic compounds
N′-(5-Bromo-2-methoxybenzylidene)-3,4-methylenedioxybenzohydrazide
aDepartment of Chemistry, Chifeng University, Chifeng 024001, People's Republic of China
*Correspondence e-mail: sangyali0814@126.com
In the title molecule, C16H13BrN2O4, the two benzene rings form a dihedral angle of 74.9 (2)°. In the crystal, molecules are linked via intermolecular N—H⋯O hydrogen bonds into chains propagating along the c axis.
Related literature
For the biological activity of hydrazone derivatives, see: Khattab (2005); Küçükgüzel et al. (2003); Cukurovali et al. (2006). For the crystal structures of related compounds, see: Fun et al. (2008); Wei et al. (2009); Khaledi et al. (2008); Yang et al. (2008).
Experimental
Crystal data
|
Refinement
|
Data collection: SMART (Bruker, 2002); cell SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809022818/cv2572sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809022818/cv2572Isup2.hkl
3,4-(Methylenedioxy)benzohydrazide (1.0 mmol, 180.2 mg) and 5-bromo-2-methoxybenzaldehyde (1.0 mmol, 215.0 mg) were mixed and refluxed in ethanol (50 ml). The mixture was stirred for 1 h to give a clear colorless solution. Colourless crystals of the title compound were formed by slow evaporation of the solution in air.
Atom H2 attached to N2 was located in a difference map and refined with N–H distance restraint of 0.90 (3) Å. The other H atoms were positioned geometrically [d(C–H) = 0.93–0.97 Å], and refined using a riding model, with Uiso(H) = 1.2Ueq(C).
Data collection: SMART (Bruker, 2002); cell
SAINT (Bruker, 2002); data reduction: SAINT (Bruker, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. The molecular structures of the title compound, showing 30% probability displacement ellipsoids and the atom-numbering scheme. |
C16H13BrN2O4 | F(000) = 760 |
Mr = 377.19 | Dx = 1.606 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2058 reflections |
a = 12.678 (1) Å | θ = 2.5–24.5° |
b = 16.217 (2) Å | µ = 2.66 mm−1 |
c = 7.846 (2) Å | T = 298 K |
β = 104.804 (3)° | Block, colourless |
V = 1559.6 (5) Å3 | 0.30 × 0.28 × 0.27 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 3110 independent reflections |
Radiation source: fine-focus sealed tube | 1932 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.032 |
ω scans | θmax = 26.2°, θmin = 1.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −12→15 |
Tmin = 0.503, Tmax = 0.534 | k = −19→19 |
8368 measured reflections | l = −9→4 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0397P)2 + 0.3363P] where P = (Fo2 + 2Fc2)/3 |
3110 reflections | (Δ/σ)max < 0.001 |
212 parameters | Δρmax = 0.26 e Å−3 |
1 restraint | Δρmin = −0.47 e Å−3 |
C16H13BrN2O4 | V = 1559.6 (5) Å3 |
Mr = 377.19 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 12.678 (1) Å | µ = 2.66 mm−1 |
b = 16.217 (2) Å | T = 298 K |
c = 7.846 (2) Å | 0.30 × 0.28 × 0.27 mm |
β = 104.804 (3)° |
Bruker SMART CCD area-detector diffractometer | 3110 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1932 reflections with I > 2σ(I) |
Tmin = 0.503, Tmax = 0.534 | Rint = 0.032 |
8368 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 1 restraint |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.26 e Å−3 |
3110 reflections | Δρmin = −0.47 e Å−3 |
212 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.79365 (3) | 0.77734 (2) | 0.01187 (6) | 0.08050 (19) | |
O1 | 0.47896 (16) | 0.98772 (12) | 0.2718 (3) | 0.0551 (6) | |
O2 | 0.23491 (16) | 0.66086 (12) | −0.0682 (3) | 0.0495 (5) | |
O3 | −0.13891 (18) | 0.56492 (16) | 0.0073 (3) | 0.0777 (7) | |
O4 | −0.1167 (2) | 0.54766 (14) | 0.3048 (4) | 0.0750 (7) | |
N1 | 0.38458 (18) | 0.76267 (14) | 0.1294 (3) | 0.0420 (6) | |
N2 | 0.29501 (19) | 0.73440 (14) | 0.1821 (3) | 0.0427 (6) | |
C1 | 0.5282 (2) | 0.86061 (18) | 0.1769 (4) | 0.0426 (7) | |
C2 | 0.5525 (2) | 0.94368 (18) | 0.2108 (4) | 0.0434 (7) | |
C3 | 0.6454 (2) | 0.9767 (2) | 0.1762 (4) | 0.0542 (8) | |
H3 | 0.6603 | 1.0327 | 0.1944 | 0.065* | |
C4 | 0.7157 (3) | 0.9274 (2) | 0.1152 (4) | 0.0561 (8) | |
H4 | 0.7787 | 0.9498 | 0.0939 | 0.067* | |
C5 | 0.6934 (2) | 0.8455 (2) | 0.0857 (4) | 0.0504 (8) | |
C6 | 0.6000 (2) | 0.81226 (19) | 0.1145 (4) | 0.0482 (8) | |
H6 | 0.5848 | 0.7566 | 0.0918 | 0.058* | |
C7 | 0.4292 (2) | 0.82617 (17) | 0.2101 (4) | 0.0423 (7) | |
H7 | 0.3982 | 0.8514 | 0.2922 | 0.051* | |
C8 | 0.2255 (2) | 0.68194 (17) | 0.0780 (4) | 0.0392 (7) | |
C9 | 0.1363 (2) | 0.64994 (16) | 0.1497 (4) | 0.0382 (7) | |
C10 | 0.0401 (2) | 0.62571 (18) | 0.0293 (4) | 0.0495 (8) | |
H10 | 0.0306 | 0.6312 | −0.0917 | 0.059* | |
C11 | −0.0387 (2) | 0.59384 (18) | 0.0980 (5) | 0.0490 (8) | |
C12 | −0.0262 (2) | 0.58422 (18) | 0.2737 (5) | 0.0521 (8) | |
C13 | 0.0667 (3) | 0.6066 (2) | 0.3945 (4) | 0.0583 (9) | |
H13 | 0.0750 | 0.5994 | 0.5148 | 0.070* | |
C14 | 0.1485 (2) | 0.64061 (18) | 0.3280 (4) | 0.0480 (7) | |
H14 | 0.2131 | 0.6576 | 0.4060 | 0.058* | |
C15 | −0.1939 (3) | 0.5446 (2) | 0.1383 (6) | 0.0819 (12) | |
H15A | −0.2524 | 0.5835 | 0.1351 | 0.098* | |
H15B | −0.2250 | 0.4897 | 0.1173 | 0.098* | |
C16 | 0.5016 (3) | 1.07233 (19) | 0.3115 (4) | 0.0610 (9) | |
H16A | 0.5691 | 1.0773 | 0.4005 | 0.092* | |
H16B | 0.4437 | 1.0961 | 0.3538 | 0.092* | |
H16C | 0.5073 | 1.1008 | 0.2070 | 0.092* | |
H2 | 0.278 (3) | 0.7609 (18) | 0.271 (3) | 0.080* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0737 (3) | 0.0813 (3) | 0.1027 (3) | 0.0049 (2) | 0.0521 (2) | −0.0014 (2) |
O1 | 0.0564 (13) | 0.0467 (13) | 0.0667 (14) | −0.0076 (10) | 0.0240 (12) | −0.0086 (11) |
O2 | 0.0570 (13) | 0.0515 (12) | 0.0467 (12) | −0.0134 (10) | 0.0255 (11) | −0.0098 (10) |
O3 | 0.0461 (14) | 0.0882 (18) | 0.098 (2) | −0.0217 (13) | 0.0169 (14) | −0.0130 (15) |
O4 | 0.0626 (15) | 0.0723 (17) | 0.105 (2) | −0.0207 (13) | 0.0492 (16) | 0.0006 (15) |
N1 | 0.0403 (13) | 0.0441 (15) | 0.0456 (15) | −0.0083 (11) | 0.0186 (12) | −0.0008 (12) |
N2 | 0.0427 (14) | 0.0452 (14) | 0.0465 (15) | −0.0125 (12) | 0.0226 (12) | −0.0047 (12) |
C1 | 0.0418 (17) | 0.0469 (18) | 0.0389 (17) | −0.0100 (14) | 0.0097 (14) | 0.0029 (14) |
C2 | 0.0441 (17) | 0.0469 (18) | 0.0390 (17) | −0.0061 (14) | 0.0104 (14) | 0.0006 (14) |
C3 | 0.0524 (19) | 0.0492 (19) | 0.062 (2) | −0.0178 (15) | 0.0176 (17) | −0.0060 (16) |
C4 | 0.0467 (18) | 0.064 (2) | 0.061 (2) | −0.0142 (16) | 0.0199 (17) | 0.0026 (18) |
C5 | 0.0470 (18) | 0.056 (2) | 0.0521 (19) | −0.0026 (15) | 0.0204 (16) | 0.0014 (16) |
C6 | 0.0516 (18) | 0.0436 (17) | 0.0513 (19) | −0.0060 (15) | 0.0165 (16) | 0.0023 (15) |
C7 | 0.0441 (17) | 0.0437 (18) | 0.0420 (17) | −0.0062 (14) | 0.0164 (14) | −0.0020 (14) |
C8 | 0.0405 (16) | 0.0356 (16) | 0.0446 (17) | −0.0027 (13) | 0.0168 (14) | 0.0003 (14) |
C9 | 0.0357 (15) | 0.0357 (15) | 0.0455 (17) | −0.0015 (12) | 0.0148 (14) | 0.0006 (14) |
C10 | 0.0450 (18) | 0.055 (2) | 0.0494 (19) | −0.0050 (15) | 0.0141 (16) | −0.0023 (16) |
C11 | 0.0330 (16) | 0.0450 (18) | 0.069 (2) | −0.0062 (14) | 0.0126 (16) | −0.0056 (16) |
C12 | 0.0466 (19) | 0.0402 (17) | 0.079 (2) | −0.0097 (15) | 0.0341 (18) | −0.0024 (17) |
C13 | 0.070 (2) | 0.062 (2) | 0.052 (2) | −0.0107 (18) | 0.0309 (19) | 0.0063 (17) |
C14 | 0.0442 (17) | 0.0503 (19) | 0.0515 (19) | −0.0075 (14) | 0.0158 (15) | 0.0019 (15) |
C15 | 0.048 (2) | 0.075 (3) | 0.128 (4) | −0.0163 (19) | 0.031 (3) | −0.006 (3) |
C16 | 0.072 (2) | 0.047 (2) | 0.067 (2) | −0.0021 (17) | 0.0240 (19) | −0.0059 (17) |
Br1—C5 | 1.884 (3) | C4—H4 | 0.9300 |
O1—C2 | 1.355 (3) | C5—C6 | 1.371 (4) |
O1—C16 | 1.420 (4) | C6—H6 | 0.9300 |
O2—C8 | 1.232 (3) | C7—H7 | 0.9300 |
O3—C11 | 1.370 (3) | C8—C9 | 1.479 (4) |
O3—C15 | 1.420 (4) | C9—C14 | 1.376 (4) |
O4—C12 | 1.367 (3) | C9—C10 | 1.395 (4) |
O4—C15 | 1.419 (5) | C10—C11 | 1.353 (4) |
N1—C7 | 1.264 (3) | C10—H10 | 0.9300 |
N1—N2 | 1.382 (3) | C11—C12 | 1.356 (4) |
N2—C8 | 1.341 (4) | C12—C13 | 1.359 (4) |
N2—H2 | 0.89 (3) | C13—C14 | 1.389 (4) |
C1—C6 | 1.382 (4) | C13—H13 | 0.9300 |
C1—C2 | 1.392 (4) | C14—H14 | 0.9300 |
C1—C7 | 1.458 (4) | C15—H15A | 0.9700 |
C2—C3 | 1.383 (4) | C15—H15B | 0.9700 |
C3—C4 | 1.372 (4) | C16—H16A | 0.9600 |
C3—H3 | 0.9300 | C16—H16B | 0.9600 |
C4—C5 | 1.366 (4) | C16—H16C | 0.9600 |
C2—O1—C16 | 117.9 (2) | C14—C9—C10 | 120.5 (3) |
C11—O3—C15 | 105.4 (3) | C14—C9—C8 | 121.8 (3) |
C12—O4—C15 | 105.3 (3) | C10—C9—C8 | 117.6 (3) |
C7—N1—N2 | 114.6 (2) | C11—C10—C9 | 116.4 (3) |
C8—N2—N1 | 119.4 (2) | C11—C10—H10 | 121.8 |
C8—N2—H2 | 122 (2) | C9—C10—H10 | 121.8 |
N1—N2—H2 | 117 (2) | C10—C11—C12 | 122.9 (3) |
C6—C1—C2 | 118.9 (3) | C10—C11—O3 | 127.2 (3) |
C6—C1—C7 | 121.4 (3) | C12—C11—O3 | 109.9 (3) |
C2—C1—C7 | 119.6 (3) | C11—C12—C13 | 122.2 (3) |
O1—C2—C3 | 124.2 (3) | C11—C12—O4 | 110.2 (3) |
O1—C2—C1 | 116.1 (2) | C13—C12—O4 | 127.5 (3) |
C3—C2—C1 | 119.7 (3) | C12—C13—C14 | 116.2 (3) |
C4—C3—C2 | 120.3 (3) | C12—C13—H13 | 121.9 |
C4—C3—H3 | 119.8 | C14—C13—H13 | 121.9 |
C2—C3—H3 | 119.8 | C9—C14—C13 | 121.7 (3) |
C5—C4—C3 | 120.1 (3) | C9—C14—H14 | 119.2 |
C5—C4—H4 | 119.9 | C13—C14—H14 | 119.2 |
C3—C4—H4 | 119.9 | O4—C15—O3 | 107.9 (3) |
C4—C5—C6 | 120.3 (3) | O4—C15—H15A | 110.1 |
C4—C5—Br1 | 119.7 (2) | O3—C15—H15A | 110.1 |
C6—C5—Br1 | 119.9 (3) | O4—C15—H15B | 110.1 |
C5—C6—C1 | 120.7 (3) | O3—C15—H15B | 110.1 |
C5—C6—H6 | 119.7 | H15A—C15—H15B | 108.4 |
C1—C6—H6 | 119.7 | O1—C16—H16A | 109.5 |
N1—C7—C1 | 121.2 (3) | O1—C16—H16B | 109.5 |
N1—C7—H7 | 119.4 | H16A—C16—H16B | 109.5 |
C1—C7—H7 | 119.4 | O1—C16—H16C | 109.5 |
O2—C8—N2 | 122.5 (2) | H16A—C16—H16C | 109.5 |
O2—C8—C9 | 121.5 (3) | H16B—C16—H16C | 109.5 |
N2—C8—C9 | 116.0 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.89 (3) | 1.96 (3) | 2.841 (3) | 168 (3) |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C16H13BrN2O4 |
Mr | 377.19 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 12.678 (1), 16.217 (2), 7.846 (2) |
β (°) | 104.804 (3) |
V (Å3) | 1559.6 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 2.66 |
Crystal size (mm) | 0.30 × 0.28 × 0.27 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.503, 0.534 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8368, 3110, 1932 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.621 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.096, 1.04 |
No. of reflections | 3110 |
No. of parameters | 212 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.26, −0.47 |
Computer programs: SMART (Bruker, 2002), SAINT (Bruker, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O2i | 0.89 (3) | 1.96 (3) | 2.841 (3) | 168 (3) |
Symmetry code: (i) x, −y+3/2, z+1/2. |
Acknowledgements
We gratefullly acknowledge Chifeng University for the funding of this study.
References
Bruker (2002). SAINT and SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Cukurovali, A., Yilmaz, I., Gur, S. & Kazaz, C. (2006). Eur. J. Med. Chem. 41, 201–207. Web of Science CrossRef PubMed CAS Google Scholar
Fun, H.-K., Patil, P. S., Rao, J. N., Kalluraya, B. & Chantrapromma, S. (2008). Acta Cryst. E64, o1707. Web of Science CSD CrossRef IUCr Journals Google Scholar
Khaledi, H., Mohd Ali, H. & Ng, S. W. (2008). Acta Cryst. E64, o2481. Web of Science CSD CrossRef IUCr Journals Google Scholar
Khattab, S. N. (2005). Molecules, 10, 1218–1228. Web of Science CrossRef PubMed CAS Google Scholar
Küçükgüzel, S. G., Mazi, A., Sahin, F., Öztürk, S. & Stables, J. (2003). Eur. J. Med. Chem. 38, 1005–1013. Web of Science PubMed Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Wei, Y.-J., Wang, F.-W. & Zhu, Q.-Y. (2009). Acta Cryst. E65, o688. Web of Science CSD CrossRef IUCr Journals Google Scholar
Yang, T., Cao, G.-B., Xiang, J.-M. & Zhang, L.-H. (2008). Acta Cryst. E64, o1186. Web of Science CSD CrossRef IUCr Journals Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Hydrazone compounds have been widely investigated due to their interesting biological properties, such as antibacterial and antitumor activities (Khattab, 2005; Küçükgüzel et al., 2003; Cukurovali et al., 2006). Recently, a number of crystal structures of hydrazone derivatives have been reported (Fun et al., 2008; Wei et al., 2009; Khaledi et al., 2008; Yang et al., 2008). In this paper, the crystal structure of the title new hydrazone compound is reported.
The molecular structure of the title compound is shown inFig. 1. The molecule adopts an E configuration with respect to the C═N bond. The dihedral angle between the two substituted benzene rings is 74.9 (2)°.
In the crystal, the molecules are linked via intermolecular N—H···O hydrogen bonds (Table 1) into chains propagated along c axis.