organic compounds
2-Amino-5,7-bis(4-fluorophenyl)-1′,3′-dimethyl-7,8-dihydrospiro[pyrido[2,3-d]pyrimidine-6(5H),5′-pyrimidine]-2′,4,4′,6′(3H,1′H,3′H,5′H)-tetraone ethanol solvate
aDepartment of Chemistry, Xuzhou Medical College, Jiangsu 221004, People's Republic of China, and bCollege of Chemistry and Chemical Engineering, Xuzhou Normal University, Xuzhou 221116, People's Republic of China
*Correspondence e-mail: laotu2001@263.net
In the molecule of the title compound, C24H20F2N6O4·C2H5OH, the pyrimidine ring is oriented at dihedral angles of 42.64 (3) and 62.94 (3)° with respect to the benzene rings, while the dihedral angle between the benzene rings is 74.45 (3)°. The pyridine ring adopts an In the intermolecular N—H⋯O and O—H⋯N hydrogen bonds link the molecules into a two-dimensional network, forming R22(8) ring motifs. π–π contacts between the pyrimidine and benzene rings [centroid–centroid distances = 3.516 (1) and 3.927 (1) Å] may further stabilize the structure.
Related literature
For bond-length data, see: Allen et al. (1987). For ring-motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT (Bruker, 1999); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL and PLATON.
Supporting information
10.1107/S1600536809022946/hk2707sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809022946/hk2707Isup2.hkl
The title compound was prepared in vial (10 ml), 2,6-diaminopyrimidine-4(3H)-one (126 mg, 1 mmol), 1,3-dimethylbarbituric acid (156 mg, 1 mmol), 4-fluorobenzaldehyde (248 mg, 2 mmol) and water (2.0 ml) were mixed, and then capped. The mixture was irradiated for 7 min at 373 K (initial power 150 W and maximum power 250 W).
H atoms were positioned geometrically, with N-H = O.86 Å (for NH and NH2), O-H = 0.82 Å (for OH) and C-H = 0.93, 0.98, 0.97 and 0.96 Å for aromatic, methine, methylene and methyl H, respectively, and constrained to ride on their parent atoms, with Uiso(H) = xUeq(C,N,O), where x = 1.5 for methyl H and OH H and x = 1.2 for all other H atoms.
Data collection: SMART (Bruker, 1998); cell
SAINT (Bruker, 1999); data reduction: SAINT (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).C24H20F2N6O4·C2H6O | Z = 2 |
Mr = 540.53 | F(000) = 564 |
Triclinic, P1 | Dx = 1.300 Mg m−3 |
Hall symbol: -P 1 | Melting point > 573 K |
a = 9.2189 (15) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 12.5924 (17) Å | Cell parameters from 1085 reflections |
c = 14.100 (2) Å | θ = 2.5–26.2° |
α = 64.634 (2)° | µ = 0.10 mm−1 |
β = 81.467 (3)° | T = 298 K |
γ = 69.027 (2)° | Block, colorless |
V = 1381.0 (4) Å3 | 0.40 × 0.37 × 0.12 mm |
Bruker SMART CCD area-detector diffractometer | 4773 independent reflections |
Radiation source: fine-focus sealed tube | 1979 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.036 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→8 |
Tmin = 0.961, Tmax = 0.988 | k = −14→14 |
7223 measured reflections | l = −15→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.066 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0296P)2] where P = (Fo2 + 2Fc2)/3 |
4773 reflections | (Δ/σ)max < 0.001 |
352 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C24H20F2N6O4·C2H6O | γ = 69.027 (2)° |
Mr = 540.53 | V = 1381.0 (4) Å3 |
Triclinic, P1 | Z = 2 |
a = 9.2189 (15) Å | Mo Kα radiation |
b = 12.5924 (17) Å | µ = 0.10 mm−1 |
c = 14.100 (2) Å | T = 298 K |
α = 64.634 (2)° | 0.40 × 0.37 × 0.12 mm |
β = 81.467 (3)° |
Bruker SMART CCD area-detector diffractometer | 4773 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1979 reflections with I > 2σ(I) |
Tmin = 0.961, Tmax = 0.988 | Rint = 0.036 |
7223 measured reflections |
R[F2 > 2σ(F2)] = 0.066 | 0 restraints |
wR(F2) = 0.120 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.16 e Å−3 |
4773 reflections | Δρmin = −0.18 e Å−3 |
352 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
F1 | −0.6967 (3) | 0.6507 (3) | 0.4242 (2) | 0.1682 (12) | |
F2 | 0.5065 (3) | −0.0663 (2) | 0.3998 (2) | 0.1646 (12) | |
O1 | 0.3825 (3) | 0.4015 (2) | 0.05479 (17) | 0.0724 (7) | |
O2 | −0.1950 (3) | 0.3213 (2) | 0.1939 (2) | 0.0921 (9) | |
O3 | −0.0319 (4) | 0.1522 (3) | 0.5289 (2) | 0.1190 (11) | |
O4 | 0.0495 (3) | 0.5117 (2) | 0.31565 (17) | 0.0687 (7) | |
O5 | 0.8805 (3) | 0.9228 (2) | 0.0997 (2) | 0.0952 (8) | |
H5 | 0.9547 | 0.9075 | 0.0620 | 0.143* | |
N1 | −0.1126 (3) | 0.6500 (2) | 0.1209 (2) | 0.0631 (8) | |
H1 | −0.1678 | 0.7246 | 0.1130 | 0.076* | |
N2 | 0.0779 (3) | 0.7345 (2) | 0.0419 (2) | 0.0641 (8) | |
N3 | 0.3234 (3) | 0.6058 (3) | 0.01820 (19) | 0.0644 (8) | |
H3 | 0.4169 | 0.6010 | −0.0035 | 0.077* | |
N4 | 0.2777 (3) | 0.8125 (3) | −0.0313 (2) | 0.0967 (11) | |
H4A | 0.2176 | 0.8855 | −0.0376 | 0.116* | |
H4B | 0.3725 | 0.8012 | −0.0519 | 0.116* | |
N5 | −0.1246 (3) | 0.2430 (3) | 0.3629 (3) | 0.0754 (9) | |
N6 | 0.0080 (3) | 0.3332 (3) | 0.4216 (2) | 0.0633 (8) | |
C1 | 0.0370 (4) | 0.6286 (3) | 0.0878 (2) | 0.0542 (9) | |
C2 | 0.2236 (5) | 0.7165 (4) | 0.0104 (3) | 0.0666 (10) | |
C3 | 0.2842 (4) | 0.4988 (3) | 0.0593 (2) | 0.0572 (9) | |
C4 | 0.1348 (4) | 0.5102 (3) | 0.1027 (2) | 0.0511 (8) | |
C5 | 0.0803 (3) | 0.3989 (3) | 0.1575 (2) | 0.0534 (9) | |
H5A | 0.0389 | 0.3884 | 0.1031 | 0.064* | |
C6 | −0.0593 (3) | 0.4266 (3) | 0.2334 (2) | 0.0508 (8) | |
C7 | −0.1839 (4) | 0.5532 (3) | 0.1689 (3) | 0.0587 (9) | |
H7 | −0.2202 | 0.5436 | 0.1121 | 0.070* | |
C8 | −0.1336 (4) | 0.3270 (3) | 0.2608 (3) | 0.0645 (10) | |
C9 | −0.0484 (5) | 0.2372 (4) | 0.4437 (3) | 0.0788 (12) | |
C10 | 0.0015 (4) | 0.4300 (3) | 0.3251 (3) | 0.0551 (9) | |
C11 | −0.1894 (5) | 0.1422 (4) | 0.3883 (3) | 0.1337 (18) | |
H11A | −0.2645 | 0.1673 | 0.3358 | 0.201* | |
H11B | −0.2387 | 0.1255 | 0.4557 | 0.201* | |
H11C | −0.1073 | 0.0683 | 0.3900 | 0.201* | |
C12 | 0.0864 (4) | 0.3261 (4) | 0.5089 (3) | 0.0979 (13) | |
H12A | 0.0106 | 0.3622 | 0.5507 | 0.147* | |
H12B | 0.1590 | 0.3710 | 0.4813 | 0.147* | |
H12C | 0.1408 | 0.2406 | 0.5517 | 0.147* | |
C13 | 0.2024 (4) | 0.2751 (3) | 0.2181 (3) | 0.0566 (9) | |
C14 | 0.2005 (5) | 0.1674 (4) | 0.2162 (3) | 0.0923 (13) | |
H14 | 0.1292 | 0.1720 | 0.1731 | 0.111* | |
C15 | 0.3015 (6) | 0.0531 (4) | 0.2763 (4) | 0.1288 (19) | |
H15 | 0.2984 | −0.0190 | 0.2744 | 0.155* | |
C16 | 0.4049 (6) | 0.0471 (4) | 0.3381 (4) | 0.1049 (15) | |
C17 | 0.4125 (4) | 0.1504 (4) | 0.3425 (3) | 0.0855 (12) | |
H17 | 0.4847 | 0.1443 | 0.3858 | 0.103* | |
C18 | 0.3109 (4) | 0.2647 (3) | 0.2815 (3) | 0.0658 (10) | |
H18 | 0.3160 | 0.3362 | 0.2834 | 0.079* | |
C19 | −0.3239 (4) | 0.5881 (3) | 0.2339 (3) | 0.0614 (9) | |
C20 | −0.4521 (4) | 0.5589 (3) | 0.2302 (3) | 0.0846 (12) | |
H20 | −0.4539 | 0.5245 | 0.1839 | 0.102* | |
C21 | −0.5790 (5) | 0.5796 (4) | 0.2940 (4) | 0.1103 (16) | |
H21 | −0.6653 | 0.5586 | 0.2921 | 0.132* | |
C22 | −0.5731 (6) | 0.6310 (5) | 0.3588 (4) | 0.1072 (16) | |
C23 | −0.4515 (5) | 0.6654 (4) | 0.3646 (3) | 0.1005 (14) | |
H23 | −0.4530 | 0.7024 | 0.4096 | 0.121* | |
C24 | −0.3249 (4) | 0.6426 (3) | 0.3002 (3) | 0.0776 (11) | |
H24 | −0.2395 | 0.6646 | 0.3021 | 0.093* | |
C25 | 0.9345 (6) | 0.8842 (4) | 0.2021 (3) | 0.1126 (15) | |
H25A | 0.9644 | 0.7943 | 0.2376 | 0.135* | |
H25B | 0.8507 | 0.9193 | 0.2416 | 0.135* | |
C26 | 1.0640 (7) | 0.9217 (5) | 0.2010 (4) | 0.168 (2) | |
H26A | 1.1452 | 0.8910 | 0.1588 | 0.251* | |
H26B | 1.1015 | 0.8884 | 0.2713 | 0.251* | |
H26C | 1.0323 | 1.0109 | 0.1720 | 0.251* |
U11 | U22 | U33 | U12 | U13 | U23 | |
F1 | 0.0895 (19) | 0.212 (3) | 0.191 (3) | −0.039 (2) | 0.072 (2) | −0.101 (2) |
F2 | 0.164 (3) | 0.0856 (19) | 0.182 (3) | 0.0200 (18) | −0.073 (2) | −0.0244 (18) |
N1 | 0.0516 (19) | 0.0545 (17) | 0.073 (2) | −0.0138 (16) | 0.0088 (15) | −0.0226 (15) |
N2 | 0.060 (2) | 0.0560 (19) | 0.0677 (19) | −0.0207 (17) | 0.0147 (16) | −0.0208 (16) |
N3 | 0.0527 (19) | 0.0603 (19) | 0.0658 (19) | −0.0183 (17) | 0.0126 (15) | −0.0168 (16) |
N4 | 0.083 (2) | 0.067 (2) | 0.123 (3) | −0.0329 (19) | 0.026 (2) | −0.024 (2) |
N5 | 0.076 (2) | 0.069 (2) | 0.085 (3) | −0.0421 (19) | 0.011 (2) | −0.023 (2) |
N6 | 0.071 (2) | 0.067 (2) | 0.0500 (19) | −0.0254 (17) | 0.0058 (16) | −0.0221 (17) |
O1 | 0.0607 (16) | 0.0671 (16) | 0.0791 (17) | −0.0149 (14) | 0.0180 (13) | −0.0310 (13) |
O2 | 0.087 (2) | 0.0913 (19) | 0.113 (2) | −0.0431 (16) | −0.0262 (17) | −0.0361 (17) |
O3 | 0.171 (3) | 0.085 (2) | 0.075 (2) | −0.046 (2) | 0.013 (2) | −0.0092 (17) |
O4 | 0.0741 (17) | 0.0823 (17) | 0.0686 (16) | −0.0397 (15) | 0.0053 (13) | −0.0379 (14) |
O5 | 0.101 (2) | 0.0892 (19) | 0.0798 (19) | −0.0185 (16) | 0.0004 (16) | −0.0310 (16) |
C1 | 0.049 (2) | 0.064 (2) | 0.049 (2) | −0.018 (2) | 0.0062 (17) | −0.0249 (18) |
C2 | 0.069 (3) | 0.054 (2) | 0.063 (2) | −0.021 (2) | 0.006 (2) | −0.013 (2) |
C3 | 0.056 (3) | 0.061 (2) | 0.049 (2) | −0.014 (2) | 0.0053 (18) | −0.0221 (19) |
C4 | 0.048 (2) | 0.049 (2) | 0.053 (2) | −0.0141 (18) | 0.0066 (17) | −0.0213 (17) |
C5 | 0.052 (2) | 0.059 (2) | 0.054 (2) | −0.0166 (18) | 0.0020 (17) | −0.0290 (18) |
C6 | 0.044 (2) | 0.057 (2) | 0.056 (2) | −0.0205 (18) | −0.0025 (17) | −0.0224 (17) |
C7 | 0.046 (2) | 0.063 (2) | 0.067 (2) | −0.0184 (19) | −0.0033 (19) | −0.0252 (19) |
C8 | 0.046 (2) | 0.067 (3) | 0.082 (3) | −0.019 (2) | −0.004 (2) | −0.029 (2) |
C9 | 0.088 (3) | 0.068 (3) | 0.063 (3) | −0.018 (3) | 0.017 (3) | −0.021 (2) |
C10 | 0.040 (2) | 0.066 (2) | 0.059 (2) | −0.0154 (19) | 0.0091 (18) | −0.030 (2) |
C11 | 0.154 (4) | 0.114 (4) | 0.155 (5) | −0.098 (4) | 0.020 (4) | −0.037 (3) |
C12 | 0.126 (4) | 0.107 (3) | 0.057 (3) | −0.029 (3) | −0.014 (3) | −0.034 (2) |
C13 | 0.052 (2) | 0.063 (2) | 0.054 (2) | −0.016 (2) | 0.0027 (18) | −0.0261 (18) |
C14 | 0.103 (3) | 0.058 (3) | 0.117 (4) | −0.009 (3) | −0.029 (3) | −0.041 (3) |
C15 | 0.140 (5) | 0.065 (3) | 0.173 (5) | −0.007 (3) | −0.055 (4) | −0.045 (3) |
C16 | 0.106 (4) | 0.059 (3) | 0.112 (4) | 0.005 (3) | −0.023 (3) | −0.019 (3) |
C17 | 0.067 (3) | 0.089 (3) | 0.082 (3) | −0.009 (3) | −0.018 (2) | −0.026 (3) |
C18 | 0.057 (2) | 0.063 (2) | 0.069 (2) | −0.013 (2) | 0.000 (2) | −0.024 (2) |
C19 | 0.037 (2) | 0.071 (2) | 0.071 (3) | −0.0140 (19) | 0.0028 (19) | −0.028 (2) |
C20 | 0.044 (2) | 0.100 (3) | 0.117 (3) | −0.024 (2) | 0.006 (2) | −0.052 (3) |
C21 | 0.055 (3) | 0.125 (4) | 0.156 (5) | −0.038 (3) | 0.023 (3) | −0.063 (4) |
C22 | 0.067 (4) | 0.120 (4) | 0.125 (4) | −0.027 (3) | 0.042 (3) | −0.057 (3) |
C23 | 0.073 (3) | 0.120 (4) | 0.117 (4) | −0.022 (3) | 0.019 (3) | −0.069 (3) |
C24 | 0.055 (3) | 0.097 (3) | 0.093 (3) | −0.022 (2) | 0.016 (2) | −0.057 (3) |
C25 | 0.147 (5) | 0.107 (4) | 0.082 (3) | −0.052 (3) | 0.000 (3) | −0.028 (3) |
C26 | 0.210 (7) | 0.201 (6) | 0.124 (4) | −0.119 (6) | −0.008 (4) | −0.051 (4) |
F1—C22 | 1.376 (5) | C7—C19 | 1.511 (4) |
F2—C16 | 1.376 (4) | C7—H7 | 0.9800 |
N1—C1 | 1.357 (4) | C11—H11A | 0.9600 |
N1—C7 | 1.453 (3) | C11—H11B | 0.9600 |
N1—H1 | 0.8600 | C11—H11C | 0.9600 |
N2—C2 | 1.320 (4) | C12—H12A | 0.9600 |
N2—C1 | 1.374 (4) | C12—H12B | 0.9600 |
N3—C2 | 1.335 (4) | C12—H12C | 0.9600 |
N3—C3 | 1.378 (4) | C13—C18 | 1.374 (4) |
N3—H3 | 0.8600 | C13—C14 | 1.375 (4) |
N4—C2 | 1.338 (4) | C14—C15 | 1.373 (5) |
N4—H4A | 0.8600 | C14—H14 | 0.9300 |
N4—H4B | 0.8600 | C15—C16 | 1.346 (5) |
N5—C8 | 1.366 (4) | C15—H15 | 0.9300 |
N5—C9 | 1.388 (4) | C16—C17 | 1.355 (5) |
N5—C11 | 1.478 (4) | C17—C18 | 1.379 (4) |
N6—C10 | 1.375 (4) | C17—H17 | 0.9300 |
N6—C9 | 1.382 (4) | C18—H18 | 0.9300 |
N6—C12 | 1.474 (4) | C19—C20 | 1.372 (4) |
O1—C3 | 1.258 (3) | C19—C24 | 1.374 (4) |
O2—C8 | 1.209 (4) | C20—C21 | 1.384 (5) |
O3—C9 | 1.203 (4) | C20—H20 | 0.9300 |
O4—C10 | 1.210 (3) | C21—C22 | 1.343 (6) |
O5—C25 | 1.418 (4) | C21—H21 | 0.9300 |
O5—H5 | 0.8200 | C22—C23 | 1.363 (5) |
C1—C4 | 1.380 (4) | C23—C24 | 1.392 (5) |
C3—C4 | 1.406 (4) | C23—H23 | 0.9300 |
C4—C5 | 1.508 (4) | C24—H24 | 0.9300 |
C5—C13 | 1.522 (4) | C25—C26 | 1.428 (5) |
C5—C6 | 1.585 (4) | C25—H25A | 0.9700 |
C5—H5A | 0.9800 | C25—H25B | 0.9700 |
C6—C10 | 1.507 (4) | C26—H26A | 0.9600 |
C6—C8 | 1.521 (4) | C26—H26B | 0.9600 |
C6—C7 | 1.564 (4) | C26—H26C | 0.9600 |
C1—N1—C7 | 123.3 (3) | H11A—C11—H11B | 109.5 |
C1—N1—H1 | 118.3 | N5—C11—H11C | 109.5 |
C7—N1—H1 | 118.3 | H11A—C11—H11C | 109.5 |
C2—N2—C1 | 114.7 (3) | H11B—C11—H11C | 109.5 |
C2—N3—C3 | 123.3 (3) | N6—C12—H12A | 109.5 |
C2—N3—H3 | 118.4 | N6—C12—H12B | 109.5 |
C3—N3—H3 | 118.4 | H12A—C12—H12B | 109.5 |
C2—N4—H4A | 120.0 | N6—C12—H12C | 109.5 |
C2—N4—H4B | 120.0 | H12A—C12—H12C | 109.5 |
H4A—N4—H4B | 120.0 | H12B—C12—H12C | 109.5 |
C8—N5—C9 | 125.8 (3) | C18—C13—C14 | 117.5 (3) |
C8—N5—C11 | 117.4 (3) | C18—C13—C5 | 122.3 (3) |
C9—N5—C11 | 116.5 (4) | C14—C13—C5 | 120.1 (3) |
C10—N6—C9 | 125.3 (3) | C15—C14—C13 | 121.6 (4) |
C10—N6—C12 | 118.7 (3) | C15—C14—H14 | 119.2 |
C9—N6—C12 | 116.0 (3) | C13—C14—H14 | 119.2 |
C25—O5—H5 | 109.5 | C16—C15—C14 | 118.9 (4) |
N1—C1—N2 | 113.2 (3) | C16—C15—H15 | 120.5 |
N1—C1—C4 | 121.5 (3) | C14—C15—H15 | 120.5 |
N2—C1—C4 | 125.3 (3) | C15—C16—C17 | 122.0 (4) |
N2—C2—N3 | 123.5 (3) | C15—C16—F2 | 120.1 (5) |
N2—C2—N4 | 119.7 (4) | C17—C16—F2 | 117.9 (5) |
N3—C2—N4 | 116.8 (4) | C16—C17—C18 | 118.6 (4) |
O1—C3—N3 | 118.3 (3) | C16—C17—H17 | 120.7 |
O1—C3—C4 | 126.1 (3) | C18—C17—H17 | 120.7 |
N3—C3—C4 | 115.6 (3) | C13—C18—C17 | 121.4 (4) |
C1—C4—C3 | 117.1 (3) | C13—C18—H18 | 119.3 |
C1—C4—C5 | 121.4 (3) | C17—C18—H18 | 119.3 |
C3—C4—C5 | 121.4 (3) | C20—C19—C24 | 118.7 (3) |
C4—C5—C13 | 116.7 (3) | C20—C19—C7 | 118.7 (4) |
C4—C5—C6 | 109.9 (3) | C24—C19—C7 | 122.5 (3) |
C13—C5—C6 | 109.1 (2) | C19—C20—C21 | 121.3 (4) |
C4—C5—H5A | 106.9 | C19—C20—H20 | 119.3 |
C13—C5—H5A | 106.9 | C21—C20—H20 | 119.3 |
C6—C5—H5A | 106.9 | C22—C21—C20 | 117.6 (4) |
C10—C6—C8 | 115.5 (3) | C22—C21—H21 | 121.2 |
C10—C6—C7 | 111.9 (3) | C20—C21—H21 | 121.2 |
C8—C6—C7 | 106.2 (3) | C21—C22—C23 | 124.2 (4) |
C10—C6—C5 | 109.1 (2) | C21—C22—F1 | 118.7 (5) |
C8—C6—C5 | 105.7 (3) | C23—C22—F1 | 117.0 (5) |
C7—C6—C5 | 108.1 (2) | C22—C23—C24 | 117.0 (4) |
N1—C7—C19 | 112.1 (3) | C22—C23—H23 | 121.5 |
N1—C7—C6 | 109.7 (2) | C24—C23—H23 | 121.5 |
C19—C7—C6 | 112.5 (3) | C19—C24—C23 | 121.1 (4) |
N1—C7—H7 | 107.4 | C19—C24—H24 | 119.5 |
C19—C7—H7 | 107.4 | C23—C24—H24 | 119.5 |
C6—C7—H7 | 107.4 | O5—C25—C26 | 112.3 (4) |
O2—C8—N5 | 121.6 (3) | O5—C25—H25A | 109.1 |
O2—C8—C6 | 120.8 (4) | C26—C25—H25A | 109.1 |
N5—C8—C6 | 117.5 (3) | O5—C25—H25B | 109.1 |
O3—C9—N6 | 121.7 (4) | C26—C25—H25B | 109.1 |
O3—C9—N5 | 121.5 (4) | H25A—C25—H25B | 107.9 |
N6—C9—N5 | 116.9 (4) | C25—C26—H26A | 109.5 |
O4—C10—N6 | 119.6 (3) | C25—C26—H26B | 109.5 |
O4—C10—C6 | 122.3 (3) | H26A—C26—H26B | 109.5 |
N6—C10—C6 | 118.0 (3) | C25—C26—H26C | 109.5 |
N5—C11—H11A | 109.5 | H26A—C26—H26C | 109.5 |
N5—C11—H11B | 109.5 | H26B—C26—H26C | 109.5 |
C7—N1—C1—N2 | 178.1 (3) | C10—N6—C9—O3 | 176.3 (3) |
C7—N1—C1—C4 | −3.3 (5) | C12—N6—C9—O3 | −1.1 (5) |
C2—N2—C1—N1 | 178.9 (3) | C10—N6—C9—N5 | −3.5 (5) |
C2—N2—C1—C4 | 0.4 (5) | C12—N6—C9—N5 | 179.1 (3) |
C1—N2—C2—N3 | 2.5 (5) | C8—N5—C9—O3 | −171.9 (4) |
C1—N2—C2—N4 | −177.2 (3) | C11—N5—C9—O3 | 2.4 (6) |
C3—N3—C2—N2 | 0.5 (5) | C8—N5—C9—N6 | 7.8 (5) |
C3—N3—C2—N4 | −179.8 (3) | C11—N5—C9—N6 | −177.9 (3) |
C2—N3—C3—O1 | 173.9 (3) | C9—N6—C10—O4 | 177.2 (3) |
C2—N3—C3—C4 | −6.0 (5) | C12—N6—C10—O4 | −5.5 (5) |
N1—C1—C4—C3 | 175.8 (3) | C9—N6—C10—C6 | −5.5 (5) |
N2—C1—C4—C3 | −5.8 (5) | C12—N6—C10—C6 | 171.9 (3) |
N1—C1—C4—C5 | −0.6 (5) | C8—C6—C10—O4 | −172.6 (3) |
N2—C1—C4—C5 | 177.8 (3) | C7—C6—C10—O4 | −51.0 (4) |
O1—C3—C4—C1 | −171.8 (3) | C5—C6—C10—O4 | 68.6 (4) |
N3—C3—C4—C1 | 8.1 (4) | C8—C6—C10—N6 | 10.1 (4) |
O1—C3—C4—C5 | 4.6 (5) | C7—C6—C10—N6 | 131.7 (3) |
N3—C3—C4—C5 | −175.5 (3) | C5—C6—C10—N6 | −108.7 (3) |
C1—C4—C5—C13 | −149.9 (3) | C4—C5—C13—C18 | 43.5 (4) |
C3—C4—C5—C13 | 33.9 (4) | C6—C5—C13—C18 | −81.7 (4) |
C1—C4—C5—C6 | −25.0 (4) | C4—C5—C13—C14 | −140.8 (3) |
C3—C4—C5—C6 | 158.7 (3) | C6—C5—C13—C14 | 94.0 (4) |
C4—C5—C6—C10 | −70.3 (3) | C18—C13—C14—C15 | 0.9 (6) |
C13—C5—C6—C10 | 58.8 (3) | C5—C13—C14—C15 | −174.9 (4) |
C4—C5—C6—C8 | 164.9 (3) | C13—C14—C15—C16 | −0.3 (7) |
C13—C5—C6—C8 | −66.0 (3) | C14—C15—C16—C17 | −0.1 (8) |
C4—C5—C6—C7 | 51.5 (3) | C14—C15—C16—F2 | 179.5 (4) |
C13—C5—C6—C7 | −179.4 (3) | C15—C16—C17—C18 | −0.1 (7) |
C1—N1—C7—C19 | 158.4 (3) | F2—C16—C17—C18 | −179.7 (3) |
C1—N1—C7—C6 | 32.6 (4) | C14—C13—C18—C17 | −1.2 (5) |
C10—C6—C7—N1 | 65.0 (3) | C5—C13—C18—C17 | 174.6 (3) |
C8—C6—C7—N1 | −168.2 (3) | C16—C17—C18—C13 | 0.8 (6) |
C5—C6—C7—N1 | −55.2 (3) | N1—C7—C19—C20 | 139.9 (3) |
C10—C6—C7—C19 | −60.5 (4) | C6—C7—C19—C20 | −95.8 (4) |
C8—C6—C7—C19 | 66.3 (4) | N1—C7—C19—C24 | −43.2 (4) |
C5—C6—C7—C19 | 179.3 (3) | C6—C7—C19—C24 | 81.1 (4) |
C9—N5—C8—O2 | 175.8 (4) | C24—C19—C20—C21 | −2.1 (6) |
C11—N5—C8—O2 | 1.5 (5) | C7—C19—C20—C21 | 174.9 (4) |
C9—N5—C8—C6 | −2.5 (5) | C19—C20—C21—C22 | 0.9 (7) |
C11—N5—C8—C6 | −176.8 (3) | C20—C21—C22—C23 | 0.9 (8) |
C10—C6—C8—O2 | 175.2 (3) | C20—C21—C22—F1 | −179.0 (4) |
C7—C6—C8—O2 | 50.6 (4) | C21—C22—C23—C24 | −1.4 (7) |
C5—C6—C8—O2 | −64.1 (4) | F1—C22—C23—C24 | 178.5 (4) |
C10—C6—C8—N5 | −6.4 (4) | C20—C19—C24—C23 | 1.6 (5) |
C7—C6—C8—N5 | −131.0 (3) | C7—C19—C24—C23 | −175.4 (3) |
C5—C6—C8—N5 | 114.3 (3) | C22—C23—C24—C19 | 0.2 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O1i | 0.86 | 1.88 | 2.737 (3) | 177 |
N4—H4A···O5ii | 0.86 | 2.07 | 2.890 (3) | 160 |
O5—H5···N2iii | 0.82 | 2.19 | 2.779 (3) | 129 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1, −y+2, −z; (iii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C24H20F2N6O4·C2H6O |
Mr | 540.53 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 9.2189 (15), 12.5924 (17), 14.100 (2) |
α, β, γ (°) | 64.634 (2), 81.467 (3), 69.027 (2) |
V (Å3) | 1381.0 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.40 × 0.37 × 0.12 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.961, 0.988 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7223, 4773, 1979 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.066, 0.120, 1.00 |
No. of reflections | 4773 |
No. of parameters | 352 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.18 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O1i | 0.86 | 1.88 | 2.737 (3) | 177 |
N4—H4A···O5ii | 0.86 | 2.07 | 2.890 (3) | 160 |
O5—H5···N2iii | 0.82 | 2.19 | 2.779 (3) | 129 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) −x+1, −y+2, −z; (iii) x+1, y, z. |
Acknowledgements
The authors are grateful to the Foundation of Xuzhou Medical College (grant No. 08 K J06) for financial support.
References
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19. CrossRef Web of Science Google Scholar
Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, 1555–1573. CrossRef CAS Web of Science Google Scholar
Bruker (1998). SMART. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (1999). SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Spek, A. L. (2009). Acta Cryst. D65, 148–155. Web of Science CrossRef CAS IUCr Journals Google Scholar
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Domino reactions, in an environmentally benign and atom economic fashion, especially considering that certain complex compounds with high diastereoselectivities such as 6-spirosubstituted pyrido[2,3-d]pyrimidine, are of great significance and are very effective and attractive. Heterocyclic spirocompounds exhibiting structural rigidity due to conformational restriction are of interest in synthetic organic chemistry. Indeed, the presence of a spirocarbon atom induces a relatively large steric strain and allows thermal, base, acid or photo-promoted rearrangement of these products, yielding new and often unexpected heterocycles. Therefore, the syntheses of these spiral structures were of considerable interest in the pharmaceutical and agrocultural chemistry. We report herein the crystal structure of the title compound.
In the molecule of the title compound (Fig 1), the bond lengths (Allen et al., 1987) and angles are within normal ranges. Rings A (N2/N3//C1-C4), C (N5/N6/C6/C8-C10), D (C13-C18) and E (C19-C24) are, of course, planar. The dihedral angles between them are A/C = 86.54 (3), A/D = 61.88 (3), A/E = 55.57 (3), C/D = 42.64 (3), C/E = 62.94 (3) and D/E = 74.45 (3) °. Ring B (N1/C1/C4-C7) adopts envelope conformation with atom C6 displaced by -0.695 (3) Å from the plane of the other ring atoms.
In the crystal structure, intermolecular N-H···O and O-H···N hydrogen bonds (Table 1) link the molecules into a two-dimensional network forming R22(8) ring motifs (Bernstein et al., 1995), in which they may be effective in the stabilization of the structure. The π–π contacts between the pyrimidine and phenyl rings, Cg3—Cg4 and Cg3—Cg5, [where Cg3, Cg4 and Cg5 are centroids of the rings C (N5/N6/C6/C8-C10), D (C13-C18) and E (C19-C24), respectively] may further stabilize the structure, with centroid-centroid distances of 3.516 (1) and 3.927 (1) Å, respectively.