metal-organic compounds
Hexakis(1H-imidazole-κN3)cobalt(II) triaquatris(1H-imidazole-κN3)cobalt(II) bis(naphthalene-1,4-dicarboxylate)
aDepartment of Chemistry, Zhejiang University, People's Republic of China
*Correspondence e-mail: xudj@mail.hz.zj.cn
The 3H4N2)6][Co(C3H4N2)3(H2O)3](C12H6O4)2, contains two halves of crystallographically independent CoII complex cations, each assuming a distorted octahedral geometry, and one uncoordinated naphthalene-1,4-dicarboxylate dianion. One CoII cation is located on an inversion center and is coordinated by six imidazole molecules, while the other CoII cation is located on a twofold rotation axis and is coordinated by three water and three imidazole molecules. The uncoordinated naphthalene-1,4-dicarboxylate dianion links both CoII complex cations via O—H⋯O and N—H⋯O hydrogen bonding. One imidazole ligand is equally disordered over two sites about a twofold rotation axis, while the coordinated N atom of the imidazole is located on the twofold rotation axis. One water O atom has 2.
of the title compound, [Co(CRelated literature
For general background to the nature of π-π stacking, see: Su & Xu (2004); Xu et al. (2007). For related structures, see: Derissen et al. (1979); Li et al. (2008a,b).
Experimental
Crystal data
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Refinement
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Data collection: PROCESS-AUTO (Rigaku, 1998); cell PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809023794/hk2715sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809023794/hk2715Isup2.hkl
A water-ethanol solution (20 ml, 1:2) of naphthalene-1,4-dicarboxyllic acid (0.11 g, 0.5 mmol) and sodium carbonate (0.053 g, 0.5 mmol) was refluxed for 0.5 h, then cobalt chloride hexahydrate (0.12 g, 0.5 mmol) was added to the above solution. The reaction mixture was refluxed for a further 4 h, then imidazole (0.10 g, 1.5 mmol) was added to the above solution and the reaction mixture was refluxed for another 0.5 h. After cooling to room temperature the solution was filtered. The single crystals of the title compound were obtained from the filtrate after one week.
The N9-containing imidazole is disordered over two sites about a twofold rotation axis, but the N9 atom is located on the twofold axis. The disordered components were refined with a half site occupancy. In the structure
the coordinates of the N9 atom were refined by introducing an artificial bias of 0.02 (in fraction) to its x and y parameters, after several cycles of the coordinates of the N9 atom shifted to the initial values of (3/4, 3/4, 0.64726). Bond distances of the disordered imidazole were restrained. Water H atoms were located in a difference Fourier map and refined as riding in as-found relative positions with Uiso(H) = 1.5Ueq(O). Other H atoms were placed in calculated positions with C—H = 0.93 Å and N—H = 0.86 Å, and refined in riding mode with Uiso(H) = 1.2Ueq(C,N).Data collection: PROCESS-AUTO (Rigaku, 1998); cell
PROCESS-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of the title compound with 30% probability displacement ellipsoids (arbitrary spheres for H atoms). One of the disordered imidazole components has been omitted for clarity. Dashed lines indicate hydrogen bonding [symmetry codes: (i) -x + 1, -y, -z + 1; (ii) -x + 3/2, -y + 3/2, z]. |
[Co(C3H4N2)6][Co(C3H4N2)3(H2O)3](C12H6O4)2 | F(000) = 2512 |
Mr = 1212.98 | Dx = 1.436 Mg m−3 |
Orthorhombic, Pccn | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ab 2ac | Cell parameters from 5022 reflections |
a = 29.388 (3) Å | θ = 1.6–25.0° |
b = 9.3275 (11) Å | µ = 0.67 mm−1 |
c = 20.475 (2) Å | T = 294 K |
V = 5612.5 (10) Å3 | Prism, pink |
Z = 4 | 0.36 × 0.32 × 0.26 mm |
Rigaku R-AXIS RAPID IP diffractometer | 5058 independent reflections |
Radiation source: fine-focus sealed tube | 3916 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.061 |
Detector resolution: 10.0 pixels mm-1 | θmax = 25.2°, θmin = 1.4° |
ω scans | h = −35→33 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −11→11 |
Tmin = 0.735, Tmax = 0.840 | l = −23→24 |
57832 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0416P)2 + 3.4164P] where P = (Fo2 + 2Fc2)/3 |
5058 reflections | (Δ/σ)max = 0.001 |
367 parameters | Δρmax = 0.82 e Å−3 |
5 restraints | Δρmin = −0.41 e Å−3 |
[Co(C3H4N2)6][Co(C3H4N2)3(H2O)3](C12H6O4)2 | V = 5612.5 (10) Å3 |
Mr = 1212.98 | Z = 4 |
Orthorhombic, Pccn | Mo Kα radiation |
a = 29.388 (3) Å | µ = 0.67 mm−1 |
b = 9.3275 (11) Å | T = 294 K |
c = 20.475 (2) Å | 0.36 × 0.32 × 0.26 mm |
Rigaku R-AXIS RAPID IP diffractometer | 5058 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 3916 reflections with I > 2σ(I) |
Tmin = 0.735, Tmax = 0.840 | Rint = 0.061 |
57832 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 5 restraints |
wR(F2) = 0.100 | H-atom parameters constrained |
S = 1.07 | Δρmax = 0.82 e Å−3 |
5058 reflections | Δρmin = −0.41 e Å−3 |
367 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Co1 | 0.5000 | 0.0000 | 0.5000 | 0.03475 (13) | |
Co2 | 0.7500 | 0.7500 | 0.54463 (2) | 0.03692 (14) | |
N1 | 0.53139 (7) | 0.2076 (2) | 0.50438 (10) | 0.0415 (5) | |
N2 | 0.58320 (9) | 0.3736 (3) | 0.49130 (13) | 0.0592 (7) | |
H2N | 0.6056 | 0.4202 | 0.4747 | 0.071* | |
N3 | 0.54621 (7) | −0.0709 (2) | 0.57572 (10) | 0.0408 (5) | |
N4 | 0.58380 (8) | −0.2194 (2) | 0.63945 (11) | 0.0500 (6) | |
H4N | 0.5921 | −0.2979 | 0.6580 | 0.060* | |
N5 | 0.45060 (7) | 0.0639 (2) | 0.57347 (10) | 0.0434 (5) | |
N6 | 0.41451 (9) | 0.0695 (3) | 0.66759 (12) | 0.0575 (6) | |
H6N | 0.4088 | 0.0574 | 0.7084 | 0.069* | |
N7 | 0.72100 (8) | 0.9634 (2) | 0.54290 (11) | 0.0467 (5) | |
N8 | 0.69494 (9) | 1.1752 (3) | 0.57111 (14) | 0.0601 (7) | |
H8N | 0.6866 | 1.2456 | 0.5955 | 0.072* | |
O1 | 0.65890 (7) | 0.0726 (2) | 0.13247 (9) | 0.0575 (5) | |
O2 | 0.60816 (7) | −0.02645 (19) | 0.19969 (9) | 0.0536 (5) | |
O3 | 0.69702 (9) | 0.6180 (3) | 0.35989 (10) | 0.0910 (9) | |
O4 | 0.65260 (7) | 0.5131 (2) | 0.43005 (9) | 0.0614 (6) | |
O1W | 0.68251 (6) | 0.65158 (18) | 0.54162 (8) | 0.0453 (4) | |
H1A | 0.6733 | 0.6170 | 0.5012 | 0.068* | |
H1B | 0.6772 | 0.5888 | 0.5708 | 0.068* | |
O2W | 0.7500 | 0.7500 | 0.44381 (11) | 0.0510 (7) | |
H2A | 0.7342 | 0.6989 | 0.4182 | 0.077* | |
C1 | 0.56663 (11) | 0.2500 (3) | 0.47050 (15) | 0.0567 (8) | |
H1 | 0.5787 | 0.1988 | 0.4356 | 0.068* | |
C2 | 0.55829 (13) | 0.4123 (3) | 0.54329 (19) | 0.0742 (10) | |
H2 | 0.5624 | 0.4933 | 0.5691 | 0.089* | |
C3 | 0.52607 (12) | 0.3104 (3) | 0.55061 (16) | 0.0646 (9) | |
H3 | 0.5036 | 0.3106 | 0.5826 | 0.078* | |
C4 | 0.55044 (10) | −0.2038 (3) | 0.59620 (13) | 0.0495 (7) | |
H4 | 0.5321 | −0.2788 | 0.5820 | 0.059* | |
C5 | 0.60213 (11) | −0.0882 (3) | 0.64854 (17) | 0.0675 (9) | |
H5 | 0.6260 | −0.0648 | 0.6765 | 0.081* | |
C6 | 0.57913 (11) | 0.0025 (3) | 0.60917 (16) | 0.0602 (8) | |
H6 | 0.5848 | 0.1003 | 0.6053 | 0.072* | |
C7 | 0.45256 (10) | 0.0328 (3) | 0.63626 (13) | 0.0499 (7) | |
H7 | 0.4775 | −0.0098 | 0.6563 | 0.060* | |
C8 | 0.38665 (12) | 0.1295 (4) | 0.62264 (17) | 0.0712 (9) | |
H8 | 0.3577 | 0.1665 | 0.6300 | 0.085* | |
C9 | 0.40880 (11) | 0.1255 (4) | 0.56533 (16) | 0.0639 (9) | |
H9 | 0.3974 | 0.1595 | 0.5259 | 0.077* | |
C10 | 0.71170 (11) | 1.0496 (3) | 0.59131 (16) | 0.0599 (8) | |
H10 | 0.7162 | 1.0263 | 0.6350 | 0.072* | |
C11 | 0.69356 (13) | 1.1707 (4) | 0.50581 (19) | 0.0776 (11) | |
H11 | 0.6836 | 1.2429 | 0.4779 | 0.093* | |
C12 | 0.70948 (13) | 1.0405 (4) | 0.48858 (17) | 0.0750 (10) | |
H12 | 0.7122 | 1.0078 | 0.4459 | 0.090* | |
C20 | 0.65783 (9) | 0.4146 (3) | 0.32301 (12) | 0.0404 (6) | |
C21 | 0.69252 (10) | 0.3443 (3) | 0.29285 (14) | 0.0558 (8) | |
H21 | 0.7224 | 0.3683 | 0.3032 | 0.067* | |
C22 | 0.68432 (10) | 0.2362 (3) | 0.24652 (14) | 0.0535 (7) | |
H22 | 0.7088 | 0.1905 | 0.2267 | 0.064* | |
C23 | 0.64097 (9) | 0.1970 (3) | 0.23010 (12) | 0.0391 (6) | |
C24 | 0.60349 (8) | 0.2713 (2) | 0.25851 (11) | 0.0358 (6) | |
C25 | 0.55755 (9) | 0.2425 (3) | 0.24077 (13) | 0.0446 (6) | |
H25 | 0.5514 | 0.1701 | 0.2108 | 0.054* | |
C26 | 0.52253 (10) | 0.3182 (3) | 0.26665 (14) | 0.0539 (7) | |
H26 | 0.4928 | 0.2956 | 0.2551 | 0.065* | |
C27 | 0.53077 (10) | 0.4302 (3) | 0.31069 (14) | 0.0559 (8) | |
H27 | 0.5066 | 0.4831 | 0.3272 | 0.067* | |
C28 | 0.57421 (10) | 0.4620 (3) | 0.32946 (13) | 0.0463 (7) | |
H28 | 0.5792 | 0.5366 | 0.3587 | 0.056* | |
C29 | 0.61191 (8) | 0.3829 (2) | 0.30492 (11) | 0.0368 (6) | |
C30 | 0.66975 (10) | 0.5234 (3) | 0.37521 (13) | 0.0467 (7) | |
C31 | 0.63550 (9) | 0.0723 (3) | 0.18330 (13) | 0.0425 (6) | |
N9 | 0.7500 | 0.7500 | 0.64726 (14) | 0.0532 (6) | |
N10 | 0.76923 (15) | 0.7145 (5) | 0.74775 (19) | 0.0532 (6) | 0.50 |
H10A | 0.7858 | 0.7124 | 0.7823 | 0.064* | 0.50 |
C13 | 0.78454 (12) | 0.7510 (6) | 0.68841 (17) | 0.0532 (6) | 0.50 |
H13 | 0.8145 | 0.7733 | 0.6780 | 0.064* | 0.50 |
C14 | 0.72418 (16) | 0.6813 (6) | 0.7466 (2) | 0.0532 (6) | 0.50 |
H14 | 0.7056 | 0.6512 | 0.7806 | 0.064* | 0.50 |
C15 | 0.71334 (12) | 0.7034 (6) | 0.68278 (19) | 0.0532 (6) | 0.50 |
H15 | 0.6845 | 0.6885 | 0.6653 | 0.064* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.0411 (3) | 0.0299 (2) | 0.0333 (2) | 0.0009 (2) | 0.0015 (2) | 0.00306 (19) |
Co2 | 0.0484 (3) | 0.0339 (2) | 0.0285 (2) | −0.0068 (2) | 0.000 | 0.000 |
N1 | 0.0466 (13) | 0.0354 (11) | 0.0424 (12) | −0.0041 (10) | −0.0008 (10) | 0.0050 (9) |
N2 | 0.0621 (16) | 0.0473 (14) | 0.0682 (17) | −0.0199 (12) | −0.0011 (13) | 0.0039 (12) |
N3 | 0.0471 (13) | 0.0333 (11) | 0.0422 (12) | 0.0041 (10) | −0.0022 (10) | 0.0034 (9) |
N4 | 0.0532 (14) | 0.0460 (13) | 0.0508 (14) | 0.0101 (11) | −0.0043 (11) | 0.0111 (11) |
N5 | 0.0484 (14) | 0.0390 (11) | 0.0427 (13) | 0.0013 (10) | 0.0074 (10) | 0.0017 (10) |
N6 | 0.0685 (17) | 0.0586 (15) | 0.0454 (14) | −0.0035 (13) | 0.0166 (13) | −0.0064 (12) |
N7 | 0.0523 (14) | 0.0396 (12) | 0.0482 (13) | −0.0011 (10) | −0.0006 (11) | 0.0016 (10) |
N8 | 0.0638 (17) | 0.0409 (13) | 0.0755 (18) | 0.0044 (12) | 0.0103 (14) | −0.0018 (13) |
O1 | 0.0802 (15) | 0.0484 (11) | 0.0438 (11) | −0.0076 (10) | 0.0182 (10) | −0.0122 (9) |
O2 | 0.0706 (14) | 0.0447 (11) | 0.0454 (11) | −0.0173 (10) | 0.0079 (10) | −0.0124 (9) |
O3 | 0.127 (2) | 0.1031 (18) | 0.0424 (12) | −0.0803 (17) | 0.0085 (13) | −0.0151 (12) |
O4 | 0.0803 (15) | 0.0672 (13) | 0.0368 (11) | −0.0317 (11) | 0.0084 (10) | −0.0135 (9) |
O1W | 0.0565 (11) | 0.0440 (10) | 0.0355 (9) | −0.0124 (8) | 0.0019 (8) | 0.0015 (8) |
O2W | 0.0704 (18) | 0.0545 (15) | 0.0282 (13) | −0.0297 (14) | 0.000 | 0.000 |
C1 | 0.067 (2) | 0.0487 (16) | 0.0548 (18) | −0.0153 (15) | 0.0080 (15) | −0.0052 (14) |
C2 | 0.086 (3) | 0.0440 (18) | 0.093 (3) | −0.0116 (17) | 0.006 (2) | −0.0203 (17) |
C3 | 0.071 (2) | 0.0473 (16) | 0.075 (2) | −0.0077 (16) | 0.0161 (17) | −0.0168 (16) |
C4 | 0.0554 (18) | 0.0394 (14) | 0.0536 (17) | −0.0004 (12) | −0.0081 (14) | 0.0074 (12) |
C5 | 0.069 (2) | 0.0526 (18) | 0.081 (2) | 0.0016 (16) | −0.0325 (18) | 0.0018 (17) |
C6 | 0.064 (2) | 0.0392 (15) | 0.078 (2) | 0.0010 (14) | −0.0231 (17) | 0.0040 (15) |
C7 | 0.0530 (17) | 0.0553 (16) | 0.0414 (16) | −0.0005 (13) | 0.0080 (13) | −0.0039 (13) |
C8 | 0.061 (2) | 0.078 (2) | 0.074 (2) | 0.0181 (18) | 0.0243 (19) | 0.0008 (19) |
C9 | 0.061 (2) | 0.072 (2) | 0.0585 (19) | 0.0217 (17) | 0.0084 (15) | 0.0112 (16) |
C10 | 0.083 (2) | 0.0414 (15) | 0.0557 (19) | 0.0021 (15) | 0.0067 (16) | 0.0006 (14) |
C11 | 0.093 (3) | 0.060 (2) | 0.080 (3) | 0.0272 (19) | −0.006 (2) | 0.0116 (18) |
C12 | 0.104 (3) | 0.064 (2) | 0.057 (2) | 0.025 (2) | −0.0131 (19) | 0.0038 (16) |
C20 | 0.0455 (16) | 0.0407 (14) | 0.0350 (13) | −0.0095 (12) | 0.0003 (11) | −0.0058 (11) |
C21 | 0.0394 (16) | 0.070 (2) | 0.0583 (18) | −0.0134 (14) | −0.0011 (14) | −0.0199 (15) |
C22 | 0.0403 (16) | 0.0631 (18) | 0.0572 (18) | −0.0031 (14) | 0.0063 (13) | −0.0204 (15) |
C23 | 0.0419 (15) | 0.0399 (13) | 0.0354 (13) | −0.0045 (11) | 0.0004 (11) | −0.0069 (11) |
C24 | 0.0392 (14) | 0.0375 (13) | 0.0306 (12) | −0.0033 (11) | −0.0030 (10) | 0.0008 (10) |
C25 | 0.0427 (16) | 0.0503 (15) | 0.0409 (14) | −0.0045 (13) | −0.0054 (12) | −0.0050 (12) |
C26 | 0.0368 (16) | 0.0713 (19) | 0.0536 (17) | 0.0014 (14) | −0.0097 (13) | 0.0009 (16) |
C27 | 0.0486 (18) | 0.0635 (19) | 0.0557 (18) | 0.0180 (15) | −0.0016 (14) | −0.0019 (15) |
C28 | 0.0566 (18) | 0.0408 (14) | 0.0416 (15) | 0.0073 (13) | −0.0019 (13) | −0.0067 (12) |
C29 | 0.0443 (15) | 0.0342 (12) | 0.0318 (13) | −0.0026 (11) | −0.0011 (11) | −0.0024 (10) |
C30 | 0.0586 (18) | 0.0444 (15) | 0.0373 (15) | −0.0163 (13) | −0.0036 (13) | −0.0058 (12) |
C31 | 0.0500 (16) | 0.0382 (14) | 0.0394 (15) | −0.0008 (12) | −0.0014 (12) | −0.0079 (11) |
N9 | 0.0688 (13) | 0.0549 (14) | 0.0359 (9) | 0.0052 (12) | 0.000 | 0.000 |
N10 | 0.0688 (13) | 0.0549 (14) | 0.0359 (9) | 0.0052 (12) | 0.000 | 0.000 |
C13 | 0.0688 (13) | 0.0549 (14) | 0.0359 (9) | 0.0052 (12) | 0.000 | 0.000 |
C14 | 0.0688 (13) | 0.0549 (14) | 0.0359 (9) | 0.0052 (12) | 0.000 | 0.000 |
C15 | 0.0688 (13) | 0.0549 (14) | 0.0359 (9) | 0.0052 (12) | 0.000 | 0.000 |
Co1—N1 | 2.146 (2) | C4—H4 | 0.9300 |
Co1—N1i | 2.146 (2) | C5—C6 | 1.350 (4) |
Co1—N3 | 2.165 (2) | C5—H5 | 0.9300 |
Co1—N3i | 2.165 (2) | C6—H6 | 0.9300 |
Co1—N5 | 2.174 (2) | C7—H7 | 0.9300 |
Co1—N5i | 2.174 (2) | C8—C9 | 1.342 (4) |
Co2—O1Wii | 2.1864 (17) | C8—H8 | 0.9300 |
Co2—O1W | 2.1864 (17) | C9—H9 | 0.9300 |
Co2—O2W | 2.064 (2) | C10—H10 | 0.9300 |
Co2—N7ii | 2.166 (2) | C11—C12 | 1.348 (5) |
Co2—N7 | 2.166 (2) | C11—H11 | 0.9300 |
Co2—N9 | 2.101 (3) | C12—H12 | 0.9300 |
N1—C1 | 1.308 (3) | C20—C21 | 1.361 (4) |
N1—C3 | 1.356 (4) | C20—C29 | 1.430 (3) |
N2—C1 | 1.322 (4) | C20—C30 | 1.515 (3) |
N2—C2 | 1.341 (4) | C21—C22 | 1.405 (4) |
N2—H2N | 0.8600 | C21—H21 | 0.9300 |
N3—C4 | 1.314 (3) | C22—C23 | 1.368 (4) |
N3—C6 | 1.369 (4) | C22—H22 | 0.9300 |
N4—C4 | 1.329 (3) | C23—C24 | 1.426 (3) |
N4—C5 | 1.350 (4) | C23—C31 | 1.515 (3) |
N4—H4N | 0.8600 | C24—C25 | 1.424 (4) |
N5—C7 | 1.319 (3) | C24—C29 | 1.431 (3) |
N5—C9 | 1.366 (4) | C25—C26 | 1.356 (4) |
N6—C7 | 1.334 (4) | C25—H25 | 0.9300 |
N6—C8 | 1.353 (4) | C26—C27 | 1.401 (4) |
N6—H6N | 0.8600 | C26—H26 | 0.9300 |
N7—C10 | 1.305 (4) | C27—C28 | 1.366 (4) |
N7—C12 | 1.367 (4) | C27—H27 | 0.9300 |
N8—C10 | 1.336 (4) | C28—C29 | 1.423 (4) |
N8—C11 | 1.338 (4) | C28—H28 | 0.9300 |
N8—H8N | 0.8600 | N9—C13 | 1.3190 (10) |
O1—C31 | 1.248 (3) | N9—C13ii | 1.3190 (10) |
O2—C31 | 1.268 (3) | N9—C15ii | 1.3706 (10) |
O3—C30 | 1.232 (3) | N9—C15 | 1.3706 (10) |
O4—C30 | 1.234 (3) | N10—C13 | 1.3395 (10) |
O1W—H1A | 0.9287 | N10—C14 | 1.3598 (10) |
O1W—H1B | 0.8504 | N10—H10A | 0.8600 |
O2W—H2A | 0.8475 | C13—H13 | 0.9300 |
C1—H1 | 0.9300 | C14—C15 | 1.3597 (10) |
C2—C3 | 1.350 (4) | C14—H14 | 0.9300 |
C2—H2 | 0.9300 | C15—H15 | 0.9300 |
C3—H3 | 0.9300 | ||
N1—Co1—N1i | 180.00 (10) | N5—C7—N6 | 112.0 (3) |
N1—Co1—N3 | 88.64 (8) | N5—C7—H7 | 124.0 |
N1i—Co1—N3 | 91.36 (8) | N6—C7—H7 | 124.0 |
N1—Co1—N3i | 91.36 (8) | C9—C8—N6 | 106.8 (3) |
N1i—Co1—N3i | 88.64 (8) | C9—C8—H8 | 126.6 |
N3—Co1—N3i | 180.00 (12) | N6—C8—H8 | 126.6 |
N1—Co1—N5 | 90.61 (8) | C8—C9—N5 | 110.0 (3) |
N1i—Co1—N5 | 89.39 (8) | C8—C9—H9 | 125.0 |
N3—Co1—N5 | 90.41 (8) | N5—C9—H9 | 125.0 |
N3i—Co1—N5 | 89.59 (8) | N7—C10—N8 | 112.5 (3) |
N1—Co1—N5i | 89.38 (8) | N7—C10—H10 | 123.8 |
N1i—Co1—N5i | 90.62 (8) | N8—C10—H10 | 123.8 |
N3—Co1—N5i | 89.59 (8) | N8—C11—C12 | 106.2 (3) |
N3i—Co1—N5i | 90.41 (8) | N8—C11—H11 | 126.9 |
N5—Co1—N5i | 180.00 (8) | C12—C11—H11 | 126.9 |
O2W—Co2—N9 | 180.000 (1) | C11—C12—N7 | 110.3 (3) |
O2W—Co2—N7ii | 89.06 (6) | C11—C12—H12 | 124.9 |
N9—Co2—N7ii | 90.94 (6) | N7—C12—H12 | 124.8 |
O2W—Co2—N7 | 89.06 (6) | C21—C20—C29 | 119.3 (2) |
N9—Co2—N7 | 90.94 (6) | C21—C20—C30 | 118.0 (2) |
N7ii—Co2—N7 | 178.12 (12) | C29—C20—C30 | 122.7 (2) |
O2W—Co2—O1Wii | 88.38 (4) | C20—C21—C22 | 121.6 (3) |
N9—Co2—O1Wii | 91.62 (4) | C20—C21—H21 | 119.2 |
N7ii—Co2—O1Wii | 91.63 (8) | C22—C21—H21 | 119.2 |
N7—Co2—O1Wii | 88.32 (8) | C23—C22—C21 | 121.2 (3) |
O2W—Co2—O1W | 88.38 (4) | C23—C22—H22 | 119.4 |
N9—Co2—O1W | 91.62 (4) | C21—C22—H22 | 119.4 |
N7ii—Co2—O1W | 88.32 (8) | C22—C23—C24 | 119.3 (2) |
N7—Co2—O1W | 91.63 (8) | C22—C23—C31 | 117.4 (2) |
O1Wii—Co2—O1W | 176.77 (9) | C24—C23—C31 | 123.3 (2) |
C1—N1—C3 | 104.3 (2) | C25—C24—C23 | 122.4 (2) |
C1—N1—Co1 | 126.23 (19) | C25—C24—C29 | 118.1 (2) |
C3—N1—Co1 | 128.12 (19) | C23—C24—C29 | 119.4 (2) |
C1—N2—C2 | 106.8 (3) | C26—C25—C24 | 121.4 (2) |
C1—N2—H2N | 126.6 | C26—C25—H25 | 119.3 |
C2—N2—H2N | 126.6 | C24—C25—H25 | 119.3 |
C4—N3—C6 | 104.2 (2) | C25—C26—C27 | 120.6 (3) |
C4—N3—Co1 | 125.18 (18) | C25—C26—H26 | 119.7 |
C6—N3—Co1 | 130.43 (17) | C27—C26—H26 | 119.7 |
C4—N4—C5 | 106.7 (2) | C28—C27—C26 | 120.3 (3) |
C4—N4—H4N | 126.7 | C28—C27—H27 | 119.8 |
C5—N4—H4N | 126.7 | C26—C27—H27 | 119.8 |
C7—N5—C9 | 104.5 (2) | C27—C28—C29 | 121.0 (2) |
C7—N5—Co1 | 125.79 (19) | C27—C28—H28 | 119.5 |
C9—N5—Co1 | 129.15 (19) | C29—C28—H28 | 119.5 |
C7—N6—C8 | 106.6 (3) | C28—C29—C20 | 122.4 (2) |
C7—N6—H6N | 126.7 | C28—C29—C24 | 118.5 (2) |
C8—N6—H6N | 126.7 | C20—C29—C24 | 119.1 (2) |
C10—N7—C12 | 104.0 (3) | O3—C30—O4 | 123.6 (2) |
C10—N7—Co2 | 129.5 (2) | O3—C30—C20 | 116.8 (2) |
C12—N7—Co2 | 126.5 (2) | O4—C30—C20 | 119.7 (2) |
C10—N8—C11 | 107.0 (3) | O1—C31—O2 | 124.8 (2) |
C10—N8—H8N | 126.5 | O1—C31—C23 | 117.9 (2) |
C11—N8—H8N | 126.5 | O2—C31—C23 | 117.2 (2) |
Co2—O1W—H1A | 115.7 | C13—N9—C13ii | 100.6 (4) |
Co2—O1W—H1B | 115.8 | C13ii—N9—C15ii | 105.6 (3) |
H1A—O1W—H1B | 109.5 | C13—N9—C15 | 105.6 (3) |
Co2—O2W—H2A | 128.3 | C15ii—N9—C15 | 115.9 (5) |
N1—C1—N2 | 112.6 (3) | C13—N9—Co2 | 129.7 (2) |
N1—C1—H1 | 123.7 | C13ii—N9—Co2 | 129.7 (2) |
N2—C1—H1 | 123.7 | C15ii—N9—Co2 | 122.0 (2) |
N2—C2—C3 | 106.3 (3) | C15—N9—Co2 | 122.0 (2) |
N2—C2—H2 | 126.8 | C13—N10—C14 | 111.6 (4) |
C3—C2—H2 | 126.8 | C13—N10—H10A | 124.2 |
C2—C3—N1 | 109.9 (3) | C14—N10—H10A | 124.2 |
C2—C3—H3 | 125.1 | N9—C13—N10 | 108.6 (4) |
N1—C3—H3 | 125.1 | N9—C13—H13 | 125.7 |
N3—C4—N4 | 112.7 (3) | N10—C13—H13 | 125.7 |
N3—C4—H4 | 123.7 | C15—C14—N10 | 102.2 (4) |
N4—C4—H4 | 123.7 | C15—C14—C14ii | 94.7 (3) |
C6—C5—N4 | 106.6 (3) | C15—C14—H14 | 128.9 |
C6—C5—H5 | 126.7 | N10—C14—H14 | 128.9 |
N4—C5—H5 | 126.7 | C14ii—C14—H14 | 130.1 |
C5—C6—N3 | 109.8 (3) | C14—C15—N9 | 111.9 (4) |
C5—C6—H6 | 125.1 | C14—C15—H15 | 124.0 |
N3—C6—H6 | 125.1 | N9—C15—H15 | 124.0 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+3/2, −y+3/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O4 | 0.93 | 1.85 | 2.768 (3) | 168 |
O1W—H1B···O1iii | 0.85 | 2.04 | 2.883 (3) | 173 |
O2W—H2A···O3 | 0.85 | 1.79 | 2.625 (3) | 171 |
N2—H2N···O4 | 0.86 | 1.87 | 2.725 (3) | 174 |
N4—H4N···O2iv | 0.86 | 1.91 | 2.766 (3) | 178 |
N6—H6N···O2i | 0.86 | 1.97 | 2.827 (3) | 176 |
N8—H8N···O1v | 0.86 | 2.03 | 2.869 (3) | 166 |
N10—H10A···O3vi | 0.86 | 1.89 | 2.658 (5) | 149 |
Symmetry codes: (i) −x+1, −y, −z+1; (iii) x, −y+1/2, z+1/2; (iv) x, −y−1/2, z+1/2; (v) x, −y+3/2, z+1/2; (vi) −x+3/2, y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Co(C3H4N2)6][Co(C3H4N2)3(H2O)3](C12H6O4)2 |
Mr | 1212.98 |
Crystal system, space group | Orthorhombic, Pccn |
Temperature (K) | 294 |
a, b, c (Å) | 29.388 (3), 9.3275 (11), 20.475 (2) |
V (Å3) | 5612.5 (10) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.67 |
Crystal size (mm) | 0.36 × 0.32 × 0.26 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.735, 0.840 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 57832, 5058, 3916 |
Rint | 0.061 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.100, 1.07 |
No. of reflections | 5058 |
No. of parameters | 367 |
No. of restraints | 5 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.82, −0.41 |
Computer programs: PROCESS-AUTO (Rigaku, 1998), CrystalStructure (Rigaku/MSC, 2002), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Co1—N1 | 2.146 (2) | Co2—O2W | 2.064 (2) |
Co1—N3 | 2.165 (2) | Co2—N7 | 2.166 (2) |
Co1—N5 | 2.174 (2) | Co2—N9 | 2.101 (3) |
Co2—O1W | 2.1864 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1A···O4 | 0.93 | 1.85 | 2.768 (3) | 168 |
O1W—H1B···O1i | 0.85 | 2.04 | 2.883 (3) | 173 |
O2W—H2A···O3 | 0.85 | 1.79 | 2.625 (3) | 171 |
N2—H2N···O4 | 0.86 | 1.87 | 2.725 (3) | 174 |
N4—H4N···O2ii | 0.86 | 1.91 | 2.766 (3) | 178 |
N6—H6N···O2iii | 0.86 | 1.97 | 2.827 (3) | 176 |
N8—H8N···O1iv | 0.86 | 2.03 | 2.869 (3) | 166 |
N10—H10A···O3v | 0.86 | 1.89 | 2.658 (5) | 149 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) x, −y−1/2, z+1/2; (iii) −x+1, −y, −z+1; (iv) x, −y+3/2, z+1/2; (v) −x+3/2, y, z+1/2. |
Acknowledgements
The work was supported by the ZIJIN project of Zhejiang University, China.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
As part of our ongoing investigation on the nature of π-π stacking (Su & Xu, 2004; Xu et al., 2007), the title compound incorporating naphthalenedicarboxylate has recently been prepared in the laboratory and its crystal structure is reported here.
The asymmetric unit contains one uncoordinated naphthalenedicarboxylate dianion and two-halves of crystallographically independent CoII complex cations. Both CoII complexes assume distorted octahedral geometry. The Co1 atom is located on an inversion center and coordinated by six imidazole ligands, while the Co2 atom is located on a twofold rotation axis and coordinated by three water molecules and three imidazole ligands (Fig. 1). In the Co2-containing complex cation, the O2W and N9 atoms are located on the twofold rotation axis. The N9-imidazole ring is equally disordered over two sites about the twofold rotation axis, and the N9-imidazole ring is tilted with respect to the twofold axis by an angle of 12.2 (2)°, which is similar to 11.9 (5)° found in the NiII analogue (Li et al. 2008b) and 14.2 (3)° found in the MnII analogue (Li et al., 2008a). The coordination bond distances (Table 1) are significantly shorter than those found in the MnII analogue but longer than those in the NiII analogue.
The uncoordinated naphthalenedicarboxylate dianion links with both CoII complex cations via O—H···O and N—H···O hydrogen bonding (Fig. 1 and Table 2). Two carboxyl groups are twisted with respect to the naphthalene ring system by dihedral angles of 53.6 (3)° and 48.9 (3)°, which are larger than those found in the structure of free naphthalenedicarboxylic acid (ca 40°; Derissen et al., 1979). No π-π stacking is observed between aromatic rings in the crystal structure.