organic compounds
4-Chloro-N-cyclohexylbenzamide
aDepartment of Chemistry, Quaid-i-Azam University, Islamabad 45320, Pakistan, bDepartment of Chemistry, Hamdard Institute of Pharmaceutical Sciences, Hamdard University–Islamabad Campus, Islamabad, Pakistan, and cDepartment of Chemistry, The University of Calgary, 2500 University Drive NW, Calgary, Alberta, Canada T2N 1N4
*Correspondence e-mail: aamersaeed@yahoo.com
In the title compound, C13H16ClNO, the cyclohexyl ring adopts a chair conformation, with puckering parameters Q = 0.576 (3) Å, θ = 0.1 (3) and φ = 8 (15)°. In the intermolecular N—H⋯O hydrogen bonds link molecules into one-dimensional chains propagating in [010].
Related literature
For applications of N-substituted benzamides, see: Beccalli et al. (2005); Calderone et al. (2006); Vega-Noverola et al. (1989); Zhichkin et al. (2007); Lindgren et al. (2001); Olsson et al. (2002). For related crystal structures, see: Jones & Kuś (2004); Saeed et al. (2008). For puckering parameters, see: Cremer & Pople (1975). For a description of the Cambridge Structural Database, see: Allen (2002).
Experimental
Crystal data
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Refinement
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Data collection: COLLECT (Hooft, 1998); cell DENZO (Otwinowski & Minor, 1997); data reduction: SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
Supporting information
10.1107/S1600536809021217/lh2834sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809021217/lh2834Isup2.hkl
4-Chlorobenzoyl chloride (5.4 mmol) in CHCl3 was treated with cyclohexylamine (21.6 mmol) under a nitrogen atmosphere at reflux for 3 h. Upon cooling, the reaction mixture was diluted with CHCl3 and washed consecutively with aq 1 M HCl and saturated aq NaHCO3. The organic layer was dried over anhydrous magnesium sulfate and concentrated under reduced pressure. Crystallization of the residue in CHCl3 afforded the title compound (87%) as colorless needles: Anal. calcd. for C13H16ClNO,: C, 65.68; H, 6.78; N, 5.89%; found: C, 65.61; H, 6.80; N, 5.91%.
All the H-atoms were visible in the difference Fourier maps, they were included in the refinements at geometrically idealized positions with N—H = 0.88 Å and C—H distances = 0.95 - 0.99 Å, and Uiso = 1.2 times Ueq of the atoms to which they were bonded. The final difference map was free of chemically significant features.
Data collection: COLLECT (Hooft, 1998); cell
DENZO (Otwinowski & Minor, 1997); data reduction: SCALEPACK (Otwinowski & Minor, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. ORTEP-3 (Farrugia, 1997) drawing of (I) with displacement ellipsoids plotted at 30% probability level. |
C13H16ClNO | F(000) = 504 |
Mr = 237.72 | Dx = 1.269 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3651 reflections |
a = 14.755 (14) Å | θ = 3.9–26.0° |
b = 5.043 (7) Å | µ = 0.29 mm−1 |
c = 16.818 (16) Å | T = 173 K |
β = 96.13 (6)° | Needle, colorless |
V = 1244 (2) Å3 | 0.12 × 0.08 × 0.06 mm |
Z = 4 |
Bruker APEXII CCD diffractometer | 2388 independent reflections |
Radiation source: fine-focus sealed tube | 1497 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.034 |
ϕ and ω scans | θmax = 26.0°, θmin = 3.9° |
Absorption correction: multi-scan (SORTAV; Blessing, 1997) | h = −18→17 |
Tmin = 0.967, Tmax = 0.983 | k = −6→4 |
3651 measured reflections | l = −20→20 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.051 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0665P)2 + 0.3764P] where P = (Fo2 + 2Fc2)/3 |
2388 reflections | (Δ/σ)max < 0.001 |
145 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
C13H16ClNO | V = 1244 (2) Å3 |
Mr = 237.72 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.755 (14) Å | µ = 0.29 mm−1 |
b = 5.043 (7) Å | T = 173 K |
c = 16.818 (16) Å | 0.12 × 0.08 × 0.06 mm |
β = 96.13 (6)° |
Bruker APEXII CCD diffractometer | 2388 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1997) | 1497 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.983 | Rint = 0.034 |
3651 measured reflections |
R[F2 > 2σ(F2)] = 0.051 | 0 restraints |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.16 e Å−3 |
2388 reflections | Δρmin = −0.21 e Å−3 |
145 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.77571 (5) | 0.29595 (19) | 0.35603 (5) | 0.0739 (3) | |
O1 | 0.35835 (12) | 0.8003 (3) | 0.37556 (11) | 0.0489 (5) | |
N1 | 0.32675 (14) | 0.3654 (4) | 0.38965 (14) | 0.0491 (6) | |
H1 | 0.3492 | 0.2036 | 0.3922 | 0.059* | |
C1 | 0.48155 (15) | 0.4944 (5) | 0.37540 (13) | 0.0369 (6) | |
C2 | 0.52269 (17) | 0.2853 (5) | 0.41805 (15) | 0.0462 (6) | |
H2 | 0.4884 | 0.1813 | 0.4512 | 0.055* | |
C3 | 0.61349 (18) | 0.2254 (6) | 0.41296 (16) | 0.0529 (7) | |
H3 | 0.6419 | 0.0831 | 0.4431 | 0.063* | |
C4 | 0.66205 (17) | 0.3746 (6) | 0.36373 (15) | 0.0489 (7) | |
C5 | 0.62262 (18) | 0.5866 (6) | 0.32108 (16) | 0.0539 (7) | |
H5 | 0.6569 | 0.6895 | 0.2876 | 0.065* | |
C6 | 0.53255 (18) | 0.6464 (5) | 0.32789 (15) | 0.0474 (6) | |
H6 | 0.5051 | 0.7938 | 0.2996 | 0.057* | |
C7 | 0.38370 (16) | 0.5666 (5) | 0.38013 (13) | 0.0388 (6) | |
C8 | 0.22970 (16) | 0.3992 (5) | 0.39603 (16) | 0.0484 (7) | |
H8 | 0.2181 | 0.5912 | 0.4058 | 0.058* | |
C9 | 0.20142 (17) | 0.2430 (7) | 0.46572 (16) | 0.0564 (8) | |
H9A | 0.2371 | 0.3025 | 0.5157 | 0.068* | |
H9B | 0.2142 | 0.0524 | 0.4582 | 0.068* | |
C10 | 0.0997 (2) | 0.2819 (9) | 0.4724 (2) | 0.0789 (11) | |
H10A | 0.0816 | 0.1731 | 0.5171 | 0.095* | |
H10B | 0.0881 | 0.4702 | 0.4845 | 0.095* | |
C11 | 0.04290 (19) | 0.2051 (7) | 0.3968 (2) | 0.0735 (10) | |
H11A | −0.0221 | 0.2421 | 0.4022 | 0.088* | |
H11B | 0.0494 | 0.0126 | 0.3875 | 0.088* | |
C12 | 0.0718 (2) | 0.3567 (8) | 0.3267 (2) | 0.0819 (11) | |
H12A | 0.0588 | 0.5476 | 0.3333 | 0.098* | |
H12B | 0.0360 | 0.2949 | 0.2770 | 0.098* | |
C13 | 0.1742 (2) | 0.3193 (7) | 0.31917 (18) | 0.0699 (9) | |
H13A | 0.1864 | 0.1313 | 0.3072 | 0.084* | |
H13B | 0.1920 | 0.4289 | 0.2746 | 0.084* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0443 (4) | 0.0948 (7) | 0.0840 (6) | 0.0035 (4) | 0.0128 (4) | −0.0220 (5) |
O1 | 0.0535 (11) | 0.0273 (9) | 0.0662 (12) | 0.0040 (8) | 0.0080 (9) | 0.0016 (8) |
N1 | 0.0406 (11) | 0.0278 (12) | 0.0806 (15) | 0.0040 (9) | 0.0135 (11) | 0.0015 (10) |
C1 | 0.0413 (12) | 0.0304 (12) | 0.0393 (12) | −0.0013 (10) | 0.0055 (10) | −0.0056 (10) |
C2 | 0.0445 (13) | 0.0408 (14) | 0.0535 (15) | 0.0020 (12) | 0.0069 (11) | 0.0053 (12) |
C3 | 0.0475 (15) | 0.0517 (17) | 0.0589 (16) | 0.0078 (13) | 0.0025 (12) | 0.0025 (14) |
C4 | 0.0410 (13) | 0.0589 (18) | 0.0472 (14) | −0.0017 (13) | 0.0063 (11) | −0.0165 (13) |
C5 | 0.0550 (16) | 0.0583 (18) | 0.0510 (15) | −0.0079 (14) | 0.0183 (13) | −0.0018 (14) |
C6 | 0.0527 (15) | 0.0415 (16) | 0.0486 (14) | −0.0019 (12) | 0.0086 (12) | 0.0051 (12) |
C7 | 0.0462 (14) | 0.0305 (14) | 0.0399 (13) | 0.0006 (11) | 0.0058 (10) | −0.0009 (10) |
C8 | 0.0396 (13) | 0.0292 (13) | 0.0768 (18) | 0.0047 (11) | 0.0074 (13) | −0.0048 (13) |
C9 | 0.0407 (14) | 0.078 (2) | 0.0518 (15) | 0.0046 (14) | 0.0100 (12) | −0.0119 (14) |
C10 | 0.0473 (16) | 0.113 (3) | 0.080 (2) | 0.0028 (18) | 0.0212 (15) | −0.016 (2) |
C11 | 0.0400 (15) | 0.067 (2) | 0.113 (3) | −0.0003 (14) | 0.0070 (17) | −0.018 (2) |
C12 | 0.0597 (19) | 0.088 (3) | 0.091 (2) | 0.0080 (18) | −0.0240 (17) | −0.005 (2) |
C13 | 0.0609 (18) | 0.088 (2) | 0.0589 (17) | 0.0027 (17) | −0.0039 (14) | 0.0122 (17) |
Cl1—C4 | 1.742 (3) | C8—C13 | 1.510 (4) |
O1—C7 | 1.236 (3) | C8—H8 | 1.0000 |
N1—C7 | 1.338 (3) | C9—C10 | 1.530 (4) |
N1—C8 | 1.457 (3) | C9—H9A | 0.9900 |
N1—H1 | 0.8800 | C9—H9B | 0.9900 |
C1—C2 | 1.379 (4) | C10—C11 | 1.496 (5) |
C1—C6 | 1.386 (3) | C10—H10A | 0.9900 |
C1—C7 | 1.499 (3) | C10—H10B | 0.9900 |
C2—C3 | 1.385 (4) | C11—C12 | 1.505 (5) |
C2—H2 | 0.9500 | C11—H11A | 0.9900 |
C3—C4 | 1.375 (4) | C11—H11B | 0.9900 |
C3—H3 | 0.9500 | C12—C13 | 1.541 (4) |
C4—C5 | 1.381 (4) | C12—H12A | 0.9900 |
C5—C6 | 1.379 (4) | C12—H12B | 0.9900 |
C5—H5 | 0.9500 | C13—H13A | 0.9900 |
C6—H6 | 0.9500 | C13—H13B | 0.9900 |
C8—C9 | 1.508 (4) | ||
C7—N1—C8 | 123.7 (2) | C8—C9—C10 | 110.2 (2) |
C7—N1—H1 | 118.1 | C8—C9—H9A | 109.6 |
C8—N1—H1 | 118.1 | C10—C9—H9A | 109.6 |
C2—C1—C6 | 119.1 (2) | C8—C9—H9B | 109.6 |
C2—C1—C7 | 122.1 (2) | C10—C9—H9B | 109.6 |
C6—C1—C7 | 118.8 (2) | H9A—C9—H9B | 108.1 |
C1—C2—C3 | 120.6 (2) | C11—C10—C9 | 111.7 (3) |
C1—C2—H2 | 119.7 | C11—C10—H10A | 109.3 |
C3—C2—H2 | 119.7 | C9—C10—H10A | 109.3 |
C4—C3—C2 | 119.2 (3) | C11—C10—H10B | 109.3 |
C4—C3—H3 | 120.4 | C9—C10—H10B | 109.3 |
C2—C3—H3 | 120.4 | H10A—C10—H10B | 107.9 |
C3—C4—C5 | 121.2 (3) | C10—C11—C12 | 110.8 (3) |
C3—C4—Cl1 | 119.2 (2) | C10—C11—H11A | 109.5 |
C5—C4—Cl1 | 119.6 (2) | C12—C11—H11A | 109.5 |
C6—C5—C4 | 118.8 (2) | C10—C11—H11B | 109.5 |
C6—C5—H5 | 120.6 | C12—C11—H11B | 109.5 |
C4—C5—H5 | 120.6 | H11A—C11—H11B | 108.1 |
C5—C6—C1 | 121.0 (3) | C11—C12—C13 | 111.3 (3) |
C5—C6—H6 | 119.5 | C11—C12—H12A | 109.4 |
C1—C6—H6 | 119.5 | C13—C12—H12A | 109.4 |
O1—C7—N1 | 122.7 (2) | C11—C12—H12B | 109.4 |
O1—C7—C1 | 121.0 (2) | C13—C12—H12B | 109.4 |
N1—C7—C1 | 116.3 (2) | H12A—C12—H12B | 108.0 |
N1—C8—C9 | 110.6 (2) | C8—C13—C12 | 110.1 (3) |
N1—C8—C13 | 110.7 (2) | C8—C13—H13A | 109.6 |
C9—C8—C13 | 110.9 (2) | C12—C13—H13A | 109.6 |
N1—C8—H8 | 108.2 | C8—C13—H13B | 109.6 |
C9—C8—H8 | 108.2 | C12—C13—H13B | 109.6 |
C13—C8—H8 | 108.2 | H13A—C13—H13B | 108.1 |
C6—C1—C2—C3 | −0.7 (4) | C6—C1—C7—O1 | −32.8 (3) |
C7—C1—C2—C3 | −179.3 (2) | C2—C1—C7—N1 | −34.0 (3) |
C1—C2—C3—C4 | −1.0 (4) | C6—C1—C7—N1 | 147.4 (2) |
C2—C3—C4—C5 | 1.7 (4) | C7—N1—C8—C9 | −132.2 (3) |
C2—C3—C4—Cl1 | −178.9 (2) | C7—N1—C8—C13 | 104.5 (3) |
C3—C4—C5—C6 | −0.6 (4) | N1—C8—C9—C10 | 179.5 (2) |
Cl1—C4—C5—C6 | −180.0 (2) | C13—C8—C9—C10 | −57.3 (3) |
C4—C5—C6—C1 | −1.2 (4) | C8—C9—C10—C11 | 56.9 (4) |
C2—C1—C6—C5 | 1.8 (4) | C9—C10—C11—C12 | −56.0 (4) |
C7—C1—C6—C5 | −179.5 (2) | C10—C11—C12—C13 | 55.5 (4) |
C8—N1—C7—O1 | −0.3 (4) | N1—C8—C13—C12 | −179.8 (3) |
C8—N1—C7—C1 | 179.5 (2) | C9—C8—C13—C12 | 57.0 (3) |
C2—C1—C7—O1 | 145.9 (2) | C11—C12—C13—C8 | −56.1 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.88 | 2.06 | 2.901 (5) | 160 |
Symmetry code: (i) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C13H16ClNO |
Mr | 237.72 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 173 |
a, b, c (Å) | 14.755 (14), 5.043 (7), 16.818 (16) |
β (°) | 96.13 (6) |
V (Å3) | 1244 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.29 |
Crystal size (mm) | 0.12 × 0.08 × 0.06 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SORTAV; Blessing, 1997) |
Tmin, Tmax | 0.967, 0.983 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3651, 2388, 1497 |
Rint | 0.034 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.051, 0.151, 1.06 |
No. of reflections | 2388 |
No. of parameters | 145 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.21 |
Computer programs: COLLECT (Hooft, 1998), DENZO (Otwinowski & Minor, 1997), SCALEPACK (Otwinowski & Minor, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.88 | 2.06 | 2.901 (5) | 159.9 |
Symmetry code: (i) x, y−1, z. |
References
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N-Substituted benzamides, e.g., declopramideare, are well known anticancer compounds and the mechanism of benzamide-induced apoptosis has been studied, (Olsson et al., 2002). N-substituted benzamides inhibit the activity of nuclear factor-B and nuclear factor of activated T cells (Lindgren et al., 2001). Various N-substituted benzamides exhibit potent antiemetic activity (Vega-Noverola et al., 1989), while heterocyclic benzanilide are potassium channel activators (Calderone et al., 2006). N-Alkylated 2-nitrobenzamides are intermediates in the synthesis of dibenzo[b,e][1,4]diazepines (Zhichkin et al., 2007) and N-Acyl-2-nitrobenzamides are precursors of 2,3-disubstitued 3H-quinazoline-4-ones (Beccalli et al., 2005). As part of our work on the structure of benzanilides and related compounds, in this paper, we report the crystal structure of the title compound, (I).
The molecular structure of (I) is presented in Fig. 1. The molecular dimensions in (I) are normal (CSD version 5.30; Allen, 2002). The six-membered ring adopts a chair conformation with puckering parameters: Q = 0.576 (3) Å, θ = 0.1 (3)° and ϕ = 8(15)° (Cremer & Pople, 1975). The structure is stabilized by hydrogen bonding (N1–H1···O1) forming chains of molecules along the b-axis (details are in Table 1). The crystal structures of closely related compounds have been reported (Saeed et al., 2008; Jones & Kuś, 2004).