organic compounds
N′-(Di-2-pyridylmethylene)benzohydrazide
aDepartment of Chemistry, King Saud University, PO 2455, Riyadh 11451, Saudi Arabia, and bDepartment of Chemistry, An-Najah National University, PO 7, Nablus, West Bank, Palestinian Territories
*Correspondence e-mail: warad@ksu.edu.sa
In the title Schiff base, C18H14N4O, the amido –NH– unit is connected to one of the two pyridyl N atoms at an N(—H)⋯N distance of 2.624 (2) Å. The molecular packing features an intermolecular C—H⋯N R22(6) hydrogen-bonding ring motif.
Related literature
For medicinal applications of benzohydrazides, see: Raparti et al. (2009); Zhong et al. (2007). For a previous study on the synthesis of benzohyrazide derivatives, see: Abu-El-Halawa et al. (2007). For ring-motif analysis; see: Bernstein et al. (1995); Grell et al. (1999).
Experimental
Crystal data
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Refinement
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Data collection: CrystalClear (Rigaku/MSC, 2007); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006) and PLUTO (Motherwell et al., 1999); software used to prepare material for publication: publCIF (Westrip, 2009).
Supporting information
10.1107/S1600536809022090/ng2595sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809022090/ng2595Isup2.hkl
Equimolar amounts of di-2-pyridyl ketone and benzohydrazide were mixed in ethanol.(Abu-El-Halawa et al. 2007) Five drops of conc. HCl were added and the mixture was refluxed for 8–10 h. After cooling, distilled water was added up to 1:3 volume ratio followed by addition of several drops of sodium hydroxide solution. The product was re-crystallized twice by water. IR, cm-1 (CHCl3): 3280, 3210, 3100, 3020, 1660, 1620, 1600, 1580, 1480, 1450, 1350, 1160, 1040, 770, 660. 1H NMR (p.p.m.): 10.70 (bs, 1H exchangeable with D2O), 8.83 (cp, 2H of two pyridine rings), 8.02 (cp, 2H of two pyridine rings), 7.99 (cp, 2H of two pyridine rings), 7.95 (cp, 2H of benzene ring), 7.62 (cp, 2H of two pyridine rings), 7.44 (cp, 2H of benzene ring) p.p.m.; 13C NMR (p.p.m.): 163.0, 155.6, 152.6, 149.2, 136.1, 134.2, 132.2, 128.9, 127.5, 126.2, 123.9.
Hydrogen atoms were refined isotropically and were constrained to the ideal geometry using an appropriate riding model with Uiso(H) fixed at 1.2 times Ueq of the pivot atom.
Data collection: CrystalClear (Rigaku/MSC, 2007); cell
CrystalClear (Rigaku/MSC, 2007); data reduction: CrystalClear (Rigaku/MSC, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006) and PLUTO (Motherwell et al., 1999); software used to prepare material for publication: publCIF (Westrip, 2009).C18H14N4O | F(000) = 632 |
Mr = 302.33 | Dx = 1.317 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71075 Å |
Hall symbol: -P 2ybc | Cell parameters from 880 reflections |
a = 8.2741 (5) Å | θ = 3.0–27.4° |
b = 22.1436 (14) Å | µ = 0.09 mm−1 |
c = 8.8006 (5) Å | T = 295 K |
β = 108.974 (2)° | Block, colourless |
V = 1524.82 (15) Å3 | 0.50 × 0.30 × 0.10 mm |
Z = 4 |
Rigaku R-AXIS RAPID diffractometer | 3491 independent reflections |
Radiation source: fine-focus sealed tube | 2329 reflections with I > 2δ(I) |
Graphite monochromator | Rint = 0.050 |
ω scans | θmax = 27.5°, θmin = 3.1° |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2007) | h = −10→10 |
Tmin = 0.968, Tmax = 0.989 | k = −28→28 |
33115 measured reflections | l = −11→11 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.169 | H-atom parameters constrained |
S = 0.99 | w = 1/[σ2(Fo2) + (0.1092P)2 + 0.076P] where P = (Fo2 + 2Fc2)/3 |
3491 reflections | (Δ/σ)max < 0.001 |
208 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C18H14N4O | V = 1524.82 (15) Å3 |
Mr = 302.33 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 8.2741 (5) Å | µ = 0.09 mm−1 |
b = 22.1436 (14) Å | T = 295 K |
c = 8.8006 (5) Å | 0.50 × 0.30 × 0.10 mm |
β = 108.974 (2)° |
Rigaku R-AXIS RAPID diffractometer | 3491 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2007) | 2329 reflections with I > 2δ(I) |
Tmin = 0.968, Tmax = 0.989 | Rint = 0.050 |
33115 measured reflections |
R[F2 > 2σ(F2)] = 0.053 | 0 restraints |
wR(F2) = 0.169 | H-atom parameters constrained |
S = 0.99 | Δρmax = 0.15 e Å−3 |
3491 reflections | Δρmin = −0.24 e Å−3 |
208 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.17708 (18) | 0.55123 (6) | 0.48480 (14) | 0.0649 (4) | |
N1 | 0.21198 (18) | 0.51374 (6) | 0.73562 (16) | 0.0485 (4) | |
H7 | 0.1902 | 0.5186 | 0.8240 | 0.058* | |
C1 | 0.1073 (2) | 0.62760 (7) | 0.8228 (2) | 0.0513 (4) | |
H1 | 0.1787 | 0.6045 | 0.9058 | 0.062* | |
N2 | 0.29967 (18) | 0.46379 (6) | 0.71474 (16) | 0.0472 (3) | |
C2 | 0.0312 (2) | 0.67909 (8) | 0.8581 (2) | 0.0598 (5) | |
H2 | 0.0526 | 0.6907 | 0.9644 | 0.072* | |
N3 | 0.22378 (18) | 0.47159 (6) | 1.01763 (16) | 0.0509 (4) | |
C3 | −0.0768 (2) | 0.71315 (8) | 0.7347 (2) | 0.0604 (5) | |
H3 | −0.1280 | 0.7477 | 0.7583 | 0.072* | |
N4 | 0.4144 (2) | 0.31839 (6) | 0.84066 (19) | 0.0550 (4) | |
C4 | −0.1087 (2) | 0.69618 (8) | 0.5779 (2) | 0.0590 (5) | |
H4 | −0.1829 | 0.7189 | 0.4956 | 0.071* | |
C5 | −0.0308 (2) | 0.64538 (8) | 0.5414 (2) | 0.0524 (4) | |
H5 | −0.0509 | 0.6346 | 0.4346 | 0.063* | |
C6 | 0.0777 (2) | 0.61027 (7) | 0.66396 (19) | 0.0455 (4) | |
C7 | 0.1590 (2) | 0.55591 (7) | 0.61664 (19) | 0.0485 (4) | |
C8 | 0.3333 (2) | 0.42967 (7) | 0.99547 (18) | 0.0432 (4) | |
C9 | 0.4310 (2) | 0.39466 (8) | 1.1233 (2) | 0.0527 (4) | |
H9 | 0.5048 | 0.3655 | 1.1072 | 0.063* | |
C10 | 0.4182 (3) | 0.40325 (8) | 1.2745 (2) | 0.0572 (5) | |
H10 | 0.4845 | 0.3804 | 1.3609 | 0.069* | |
C11 | 0.3068 (2) | 0.44583 (8) | 1.2965 (2) | 0.0533 (4) | |
H11 | 0.2958 | 0.4523 | 1.3971 | 0.064* | |
C12 | 0.2125 (2) | 0.47854 (8) | 1.1649 (2) | 0.0551 (4) | |
H12 | 0.1363 | 0.5072 | 1.1789 | 0.066* | |
C13 | 0.3515 (2) | 0.42534 (7) | 0.83260 (18) | 0.0433 (4) | |
C14 | 0.4492 (2) | 0.37362 (7) | 0.79543 (18) | 0.0444 (4) | |
C15 | 0.5690 (2) | 0.38299 (8) | 0.71803 (19) | 0.0514 (4) | |
H15 | 0.5880 | 0.4216 | 0.6856 | 0.062* | |
C16 | 0.6594 (2) | 0.33445 (9) | 0.6899 (2) | 0.0611 (5) | |
H16 | 0.7415 | 0.3399 | 0.6399 | 0.073* | |
C17 | 0.6260 (3) | 0.27757 (9) | 0.7371 (2) | 0.0645 (5) | |
H17 | 0.6853 | 0.2440 | 0.7199 | 0.077* | |
C18 | 0.5033 (3) | 0.27192 (8) | 0.8099 (2) | 0.0617 (5) | |
H18 | 0.4802 | 0.2334 | 0.8399 | 0.074* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0939 (10) | 0.0613 (8) | 0.0480 (7) | 0.0160 (7) | 0.0345 (7) | 0.0053 (6) |
N1 | 0.0645 (9) | 0.0402 (7) | 0.0455 (8) | 0.0074 (6) | 0.0244 (7) | 0.0017 (5) |
C1 | 0.0561 (10) | 0.0503 (9) | 0.0458 (9) | 0.0045 (7) | 0.0141 (8) | 0.0005 (7) |
N2 | 0.0561 (8) | 0.0404 (7) | 0.0474 (8) | 0.0030 (6) | 0.0197 (6) | −0.0015 (6) |
C2 | 0.0679 (12) | 0.0604 (11) | 0.0519 (10) | 0.0054 (9) | 0.0209 (9) | −0.0086 (8) |
N3 | 0.0565 (9) | 0.0531 (8) | 0.0476 (8) | 0.0065 (6) | 0.0230 (6) | 0.0016 (6) |
C3 | 0.0657 (12) | 0.0517 (10) | 0.0663 (12) | 0.0110 (8) | 0.0251 (10) | −0.0015 (8) |
N4 | 0.0674 (10) | 0.0388 (7) | 0.0649 (9) | −0.0004 (6) | 0.0300 (8) | −0.0024 (6) |
C4 | 0.0631 (11) | 0.0563 (10) | 0.0579 (11) | 0.0115 (8) | 0.0204 (9) | 0.0128 (8) |
C5 | 0.0606 (10) | 0.0517 (9) | 0.0463 (9) | 0.0027 (8) | 0.0192 (8) | 0.0053 (7) |
C6 | 0.0506 (9) | 0.0430 (8) | 0.0454 (9) | −0.0013 (7) | 0.0192 (7) | 0.0018 (6) |
C7 | 0.0570 (10) | 0.0464 (9) | 0.0444 (9) | 0.0018 (7) | 0.0197 (7) | 0.0023 (7) |
C8 | 0.0476 (9) | 0.0383 (8) | 0.0456 (9) | −0.0028 (6) | 0.0176 (7) | −0.0025 (6) |
C9 | 0.0607 (10) | 0.0493 (9) | 0.0488 (9) | 0.0084 (8) | 0.0188 (8) | 0.0000 (7) |
C10 | 0.0720 (12) | 0.0539 (10) | 0.0439 (9) | 0.0034 (8) | 0.0165 (8) | 0.0025 (7) |
C11 | 0.0668 (11) | 0.0527 (10) | 0.0452 (9) | −0.0066 (8) | 0.0249 (8) | −0.0041 (7) |
C12 | 0.0623 (11) | 0.0565 (10) | 0.0538 (10) | 0.0040 (8) | 0.0289 (9) | −0.0021 (8) |
C13 | 0.0477 (9) | 0.0407 (8) | 0.0427 (8) | −0.0021 (6) | 0.0165 (7) | −0.0027 (6) |
C14 | 0.0495 (9) | 0.0417 (8) | 0.0409 (8) | −0.0002 (6) | 0.0132 (7) | −0.0025 (6) |
C15 | 0.0564 (10) | 0.0511 (9) | 0.0487 (9) | −0.0005 (7) | 0.0197 (8) | 0.0007 (7) |
C16 | 0.0597 (11) | 0.0703 (12) | 0.0584 (11) | 0.0085 (9) | 0.0264 (9) | −0.0030 (9) |
C17 | 0.0699 (12) | 0.0594 (11) | 0.0622 (12) | 0.0174 (9) | 0.0189 (10) | −0.0082 (9) |
C18 | 0.0770 (13) | 0.0423 (9) | 0.0672 (12) | 0.0041 (8) | 0.0255 (10) | −0.0031 (8) |
O1—C7 | 1.2217 (18) | C6—C7 | 1.502 (2) |
N1—C7 | 1.365 (2) | C8—C9 | 1.389 (2) |
N1—N2 | 1.3677 (17) | C8—C13 | 1.492 (2) |
N1—H7 | 0.8600 | C9—C10 | 1.382 (2) |
C1—C2 | 1.386 (2) | C9—H9 | 0.9300 |
C1—C6 | 1.392 (2) | C10—C11 | 1.375 (2) |
C1—H1 | 0.9300 | C10—H10 | 0.9300 |
N2—C13 | 1.302 (2) | C11—C12 | 1.374 (2) |
C2—C3 | 1.384 (3) | C11—H11 | 0.9300 |
C2—H2 | 0.9300 | C12—H12 | 0.9300 |
N3—C12 | 1.338 (2) | C13—C14 | 1.498 (2) |
N3—C8 | 1.355 (2) | C14—C15 | 1.389 (2) |
C3—C4 | 1.371 (3) | C15—C16 | 1.377 (2) |
C3—H3 | 0.9300 | C15—H15 | 0.9300 |
N4—C18 | 1.343 (2) | C16—C17 | 1.382 (3) |
N4—C14 | 1.3458 (19) | C16—H16 | 0.9300 |
C4—C5 | 1.385 (2) | C17—C18 | 1.371 (3) |
C4—H4 | 0.9300 | C17—H17 | 0.9300 |
C5—C6 | 1.394 (2) | C18—H18 | 0.9300 |
C5—H5 | 0.9300 | ||
C7—N1—N2 | 120.17 (13) | C10—C9—C8 | 119.78 (15) |
C7—N1—H7 | 119.9 | C10—C9—H9 | 120.1 |
N2—N1—H7 | 119.9 | C8—C9—H9 | 120.1 |
C2—C1—C6 | 120.52 (16) | C11—C10—C9 | 119.62 (16) |
C2—C1—H1 | 119.7 | C11—C10—H10 | 120.2 |
C6—C1—H1 | 119.7 | C9—C10—H10 | 120.2 |
C13—N2—N1 | 118.27 (12) | C12—C11—C10 | 117.75 (15) |
C3—C2—C1 | 119.78 (16) | C12—C11—H11 | 121.1 |
C3—C2—H2 | 120.1 | C10—C11—H11 | 121.1 |
C1—C2—H2 | 120.1 | N3—C12—C11 | 123.82 (16) |
C12—N3—C8 | 118.61 (14) | N3—C12—H12 | 118.1 |
C4—C3—C2 | 120.29 (16) | C11—C12—H12 | 118.1 |
C4—C3—H3 | 119.9 | N2—C13—C8 | 127.81 (14) |
C2—C3—H3 | 119.9 | N2—C13—C14 | 112.79 (13) |
C18—N4—C14 | 116.92 (15) | C8—C13—C14 | 119.29 (13) |
C3—C4—C5 | 120.30 (16) | N4—C14—C15 | 122.42 (15) |
C3—C4—H4 | 119.8 | N4—C14—C13 | 116.60 (14) |
C5—C4—H4 | 119.8 | C15—C14—C13 | 120.98 (14) |
C4—C5—C6 | 120.28 (16) | C16—C15—C14 | 119.18 (16) |
C4—C5—H5 | 119.9 | C16—C15—H15 | 120.4 |
C6—C5—H5 | 119.9 | C14—C15—H15 | 120.4 |
C1—C6—C5 | 118.80 (15) | C15—C16—C17 | 118.97 (17) |
C1—C6—C7 | 123.43 (14) | C15—C16—H16 | 120.5 |
C5—C6—C7 | 117.76 (14) | C17—C16—H16 | 120.5 |
O1—C7—N1 | 124.24 (15) | C18—C17—C16 | 118.30 (17) |
O1—C7—C6 | 122.38 (14) | C18—C17—H17 | 120.8 |
N1—C7—C6 | 113.37 (13) | C16—C17—H17 | 120.9 |
N3—C8—C9 | 120.41 (14) | N4—C18—C17 | 124.18 (17) |
N3—C8—C13 | 117.62 (13) | N4—C18—H18 | 117.9 |
C9—C8—C13 | 121.88 (14) | C17—C18—H18 | 117.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H7···N3 | 0.86 | 1.94 | 2.624 (2) | 136 |
C9—H9···N4 | 0.93 | 2.45 | 2.973 (2) | 115 |
Experimental details
Crystal data | |
Chemical formula | C18H14N4O |
Mr | 302.33 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 295 |
a, b, c (Å) | 8.2741 (5), 22.1436 (14), 8.8006 (5) |
β (°) | 108.974 (2) |
V (Å3) | 1524.82 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.50 × 0.30 × 0.10 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2007) |
Tmin, Tmax | 0.968, 0.989 |
No. of measured, independent and observed [I > 2δ(I)] reflections | 33115, 3491, 2329 |
Rint | 0.050 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.053, 0.169, 0.99 |
No. of reflections | 3491 |
No. of parameters | 208 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.24 |
Computer programs: CrystalClear (Rigaku/MSC, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006) and PLUTO (Motherwell et al., 1999), publCIF (Westrip, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H7···N3 | 0.86 | 1.94 | 2.624 (2) | 135.7 |
C9—H9···N4 | 0.93 | 2.45 | 2.973 (2) | 115 |
Acknowledgements
IW and SAR thank SABIC for financial support.
References
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Benzohydrazide derivatives were known as good antitumor and antimycobacterial agent (Raparti et al. 2009; Zhong et al. 2007). The molecular packing of the title compound is supported by C— H···N intermolecular hydrogen bondings at D···A distance of 2.956 (1) and D— H···A angle of 128.92 (1)° that is recognized by R22(6) second order ring motif, as earlier defined (Bernstein et al. 1995; Grell et al. 1999) and calculated with Pluto (Motherwell et al., 1999), see Figure 2.