metal-organic compounds
Dichloridobis[1-(2-methylbenzimidazol-1-ylmethyl-κN3)benzotriazole]mercury(II)
aDepartment of Chemistry, Zhengzhou University, Zhengzhou 450052, People's Republic of China
*Correspondence e-mail: wujie@zzu.edu.cn
In the title compound, [HgCl2(C15H13N5)2], the HgII atom is located on a twofold rotation axis and resides in a distorted tetrahedral coordination environment composed of two Cl atoms and two N atoms from two 1-(2-methylbenzimidazol-1-ylmethyl)benzotriazole ligands.
Related literature
For metal complexes of similar N-heterocyclic ligands, see: Fan et al. (2003); Hoskins et al. (1997); Makoto et al. (2005)
Experimental
Crystal data
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Data collection: CrystalClear (Rigaku/MSC, 2006); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXS97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809023459/ng2600sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809023459/ng2600Isup2.hkl
The ligand N-(2-methyl-benzoimidazol-3-yl-methyl)-benzotriazole (0.04 mmol, 0.118 g) in MeOH (6 ml) was added dropwise to a solution of HgCl2 (0.4 mmol, 0.108 g) in methanol (3 ml). The precipitate was filtered and the resulting solution was allowed to stand at room temperature in the dark. After one week good quality colorless crystals were obtained from the filtrate and dried in air.
H atoms were generated geometrically, with C-H = 0.96, 0.86 and 0.93Å for methyl, N and aromatic H, respectively, and constrained to ride their parent atoms with Uiso(H) = x times Ueq(C), where x = 1.5 for methyl H and x = 1.2 for all other H atoms.
Data collection: CrystalClear (Rigaku/MSC, 2006); cell
CrystalClear (Rigaku/MSC , 2006); data reduction: CrystalClear (Rigaku/MSC, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXS97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. View of the title complex, showing the labeling of the non-H atoms and 30% probability ellipsolids. |
[HgCl2(C15H13N5)2] | F(000) = 1560 |
Mr = 798.10 | Dx = 1.802 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 4239 reflections |
a = 15.612 (3) Å | θ = 2.1–29.1° |
b = 12.883 (3) Å | µ = 5.46 mm−1 |
c = 14.751 (3) Å | T = 293 K |
β = 97.49 (3)° | Prism, colorless |
V = 2941.5 (11) Å3 | 0.22 × 0.18 × 0.16 mm |
Z = 4 |
Rigaku Saturn724 diffractometer | 2587 independent reflections |
Radiation source: fine-focus sealed tube | 2379 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.051 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 25.0°, θmin = 2.4° |
dtprofit.ref scans | h = −18→18 |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2006) | k = −15→15 |
Tmin = 0.380, Tmax = 0.476 | l = −17→17 |
14609 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.062 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.0229P)2 + 4.6614P] where P = (Fo2 + 2Fc2)/3 |
2587 reflections | (Δ/σ)max < 0.001 |
196 parameters | Δρmax = 0.57 e Å−3 |
0 restraints | Δρmin = −0.47 e Å−3 |
[HgCl2(C15H13N5)2] | V = 2941.5 (11) Å3 |
Mr = 798.10 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 15.612 (3) Å | µ = 5.46 mm−1 |
b = 12.883 (3) Å | T = 293 K |
c = 14.751 (3) Å | 0.22 × 0.18 × 0.16 mm |
β = 97.49 (3)° |
Rigaku Saturn724 diffractometer | 2587 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2006) | 2379 reflections with I > 2σ(I) |
Tmin = 0.380, Tmax = 0.476 | Rint = 0.051 |
14609 measured reflections |
R[F2 > 2σ(F2)] = 0.036 | 0 restraints |
wR(F2) = 0.062 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.57 e Å−3 |
2587 reflections | Δρmin = −0.47 e Å−3 |
196 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Hg1 | 0.5000 | −0.10389 (2) | 0.2500 | 0.04638 (11) | |
Cl1 | 0.62989 (9) | −0.19849 (10) | 0.30815 (8) | 0.0585 (4) | |
N1 | 0.4757 (2) | 0.0231 (3) | 0.3545 (2) | 0.0389 (9) | |
N2 | 0.4113 (2) | 0.1501 (3) | 0.4213 (2) | 0.0380 (9) | |
N3 | 0.3561 (2) | 0.3232 (3) | 0.4176 (2) | 0.0439 (10) | |
N4 | 0.3539 (3) | 0.3999 (4) | 0.4808 (3) | 0.0606 (12) | |
N5 | 0.3651 (3) | 0.4882 (4) | 0.4425 (3) | 0.0642 (13) | |
C1 | 0.3170 (3) | 0.0391 (4) | 0.3110 (4) | 0.0577 (14) | |
H1A | 0.3243 | −0.0205 | 0.2737 | 0.087* | |
H1B | 0.2941 | 0.0956 | 0.2728 | 0.087* | |
H1C | 0.2778 | 0.0226 | 0.3538 | 0.087* | |
C2 | 0.4021 (3) | 0.0696 (4) | 0.3614 (3) | 0.0392 (11) | |
C3 | 0.5386 (3) | 0.0762 (3) | 0.4139 (3) | 0.0359 (11) | |
C4 | 0.6271 (3) | 0.0600 (4) | 0.4337 (3) | 0.0436 (11) | |
H4 | 0.6547 | 0.0066 | 0.4064 | 0.052* | |
C5 | 0.6722 (3) | 0.1269 (4) | 0.4956 (3) | 0.0513 (13) | |
H5 | 0.7317 | 0.1191 | 0.5095 | 0.062* | |
C6 | 0.6311 (3) | 0.2054 (4) | 0.5377 (3) | 0.0541 (13) | |
H6 | 0.6637 | 0.2481 | 0.5799 | 0.065* | |
C7 | 0.5436 (3) | 0.2220 (4) | 0.5189 (3) | 0.0452 (12) | |
H7 | 0.5163 | 0.2750 | 0.5469 | 0.054* | |
C8 | 0.4984 (3) | 0.1560 (3) | 0.4564 (3) | 0.0348 (10) | |
C9 | 0.3430 (3) | 0.2172 (4) | 0.4447 (3) | 0.0471 (12) | |
H9A | 0.2878 | 0.1926 | 0.4145 | 0.057* | |
H9B | 0.3414 | 0.2146 | 0.5102 | 0.057* | |
C10 | 0.3696 (3) | 0.3647 (4) | 0.3355 (3) | 0.0420 (11) | |
C11 | 0.3763 (3) | 0.3232 (5) | 0.2497 (3) | 0.0568 (14) | |
H11 | 0.3719 | 0.2523 | 0.2381 | 0.068* | |
C12 | 0.3900 (3) | 0.3936 (5) | 0.1833 (4) | 0.0636 (16) | |
H12 | 0.3946 | 0.3697 | 0.1246 | 0.076* | |
C13 | 0.3973 (3) | 0.5008 (6) | 0.2009 (4) | 0.0688 (17) | |
H13 | 0.4074 | 0.5456 | 0.1539 | 0.083* | |
C14 | 0.3898 (3) | 0.5404 (5) | 0.2845 (4) | 0.0642 (16) | |
H14 | 0.3943 | 0.6114 | 0.2959 | 0.077* | |
C15 | 0.3752 (3) | 0.4707 (4) | 0.3524 (3) | 0.0496 (13) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Hg1 | 0.05294 (19) | 0.03316 (15) | 0.05032 (18) | 0.000 | −0.00348 (13) | 0.000 |
Cl1 | 0.0714 (9) | 0.0507 (8) | 0.0509 (7) | 0.0232 (7) | −0.0012 (7) | 0.0044 (6) |
N1 | 0.039 (2) | 0.034 (2) | 0.044 (2) | 0.0053 (18) | 0.0057 (18) | −0.0056 (17) |
N2 | 0.035 (2) | 0.039 (2) | 0.040 (2) | 0.0014 (17) | 0.0063 (18) | −0.0022 (18) |
N3 | 0.050 (2) | 0.045 (2) | 0.037 (2) | 0.0158 (19) | 0.0079 (19) | −0.0040 (19) |
N4 | 0.080 (3) | 0.058 (3) | 0.045 (2) | 0.023 (3) | 0.011 (2) | −0.010 (2) |
N5 | 0.085 (4) | 0.048 (3) | 0.060 (3) | 0.014 (3) | 0.006 (3) | −0.003 (2) |
C1 | 0.042 (3) | 0.063 (4) | 0.064 (3) | −0.001 (3) | −0.005 (3) | −0.013 (3) |
C2 | 0.040 (3) | 0.040 (3) | 0.038 (3) | −0.005 (2) | 0.004 (2) | 0.001 (2) |
C3 | 0.041 (3) | 0.034 (2) | 0.032 (2) | −0.002 (2) | 0.003 (2) | −0.0002 (19) |
C4 | 0.036 (3) | 0.046 (3) | 0.049 (3) | 0.004 (2) | 0.007 (2) | −0.004 (2) |
C5 | 0.038 (3) | 0.057 (3) | 0.058 (3) | −0.006 (2) | 0.005 (2) | −0.001 (3) |
C6 | 0.054 (3) | 0.057 (3) | 0.049 (3) | −0.010 (3) | −0.001 (3) | −0.010 (3) |
C7 | 0.051 (3) | 0.039 (3) | 0.046 (3) | 0.001 (2) | 0.007 (2) | −0.006 (2) |
C8 | 0.040 (3) | 0.032 (2) | 0.032 (2) | −0.001 (2) | 0.005 (2) | 0.001 (2) |
C9 | 0.044 (3) | 0.056 (3) | 0.045 (3) | 0.012 (2) | 0.018 (2) | 0.000 (2) |
C10 | 0.034 (3) | 0.054 (3) | 0.039 (3) | 0.009 (2) | 0.007 (2) | −0.001 (2) |
C11 | 0.053 (3) | 0.074 (4) | 0.043 (3) | 0.009 (3) | 0.007 (3) | −0.004 (3) |
C12 | 0.047 (3) | 0.107 (5) | 0.036 (3) | 0.005 (3) | 0.004 (2) | −0.002 (3) |
C13 | 0.043 (3) | 0.094 (5) | 0.068 (4) | 0.001 (3) | 0.001 (3) | 0.033 (4) |
C14 | 0.050 (3) | 0.064 (4) | 0.076 (4) | 0.006 (3) | −0.001 (3) | 0.016 (3) |
C15 | 0.047 (3) | 0.054 (3) | 0.047 (3) | 0.014 (3) | 0.002 (2) | 0.003 (3) |
Hg1—N1 | 2.313 (3) | C4—C5 | 1.380 (7) |
Hg1—N1i | 2.313 (3) | C4—H4 | 0.9300 |
Hg1—Cl1i | 2.4248 (13) | C5—C6 | 1.387 (7) |
Hg1—Cl1 | 2.4248 (13) | C5—H5 | 0.9300 |
N1—C2 | 1.311 (5) | C6—C7 | 1.375 (6) |
N1—C3 | 1.405 (5) | C6—H6 | 0.9300 |
N2—C2 | 1.357 (6) | C7—C8 | 1.378 (6) |
N2—C8 | 1.392 (5) | C7—H7 | 0.9300 |
N2—C9 | 1.450 (5) | C9—H9A | 0.9700 |
N3—N4 | 1.362 (5) | C9—H9B | 0.9700 |
N3—C10 | 1.366 (6) | C10—C15 | 1.389 (7) |
N3—C9 | 1.444 (6) | C10—C11 | 1.390 (6) |
N4—N5 | 1.293 (6) | C11—C12 | 1.372 (7) |
N5—C15 | 1.377 (6) | C11—H11 | 0.9300 |
C1—C2 | 1.488 (6) | C12—C13 | 1.407 (8) |
C1—H1A | 0.9600 | C12—H12 | 0.9300 |
C1—H1B | 0.9600 | C13—C14 | 1.354 (8) |
C1—H1C | 0.9600 | C13—H13 | 0.9300 |
C3—C4 | 1.391 (6) | C14—C15 | 1.387 (7) |
C3—C8 | 1.395 (6) | C14—H14 | 0.9300 |
N1—Hg1—N1i | 89.97 (18) | C6—C5—H5 | 119.1 |
N1—Hg1—Cl1i | 112.90 (10) | C7—C6—C5 | 121.8 (5) |
N1i—Hg1—Cl1i | 108.78 (10) | C7—C6—H6 | 119.1 |
N1—Hg1—Cl1 | 108.78 (10) | C5—C6—H6 | 119.1 |
N1i—Hg1—Cl1 | 112.90 (10) | C6—C7—C8 | 116.6 (4) |
Cl1i—Hg1—Cl1 | 119.65 (7) | C6—C7—H7 | 121.7 |
C2—N1—C3 | 106.1 (4) | C8—C7—H7 | 121.7 |
C2—N1—Hg1 | 126.6 (3) | C7—C8—N2 | 132.3 (4) |
C3—N1—Hg1 | 126.7 (3) | C7—C8—C3 | 122.3 (4) |
C2—N2—C8 | 107.5 (4) | N2—C8—C3 | 105.4 (4) |
C2—N2—C9 | 126.3 (4) | N3—C9—N2 | 111.3 (4) |
C8—N2—C9 | 126.2 (4) | N3—C9—H9A | 109.4 |
N4—N3—C10 | 110.1 (4) | N2—C9—H9A | 109.4 |
N4—N3—C9 | 118.7 (4) | N3—C9—H9B | 109.4 |
C10—N3—C9 | 131.2 (4) | N2—C9—H9B | 109.4 |
N5—N4—N3 | 108.8 (4) | H9A—C9—H9B | 108.0 |
N4—N5—C15 | 108.4 (4) | N3—C10—C15 | 103.8 (4) |
C2—C1—H1A | 109.5 | N3—C10—C11 | 134.1 (5) |
C2—C1—H1B | 109.5 | C15—C10—C11 | 122.1 (5) |
H1A—C1—H1B | 109.5 | C12—C11—C10 | 115.7 (5) |
C2—C1—H1C | 109.5 | C12—C11—H11 | 122.2 |
H1A—C1—H1C | 109.5 | C10—C11—H11 | 122.2 |
H1B—C1—H1C | 109.5 | C11—C12—C13 | 122.2 (5) |
N1—C2—N2 | 112.3 (4) | C11—C12—H12 | 118.9 |
N1—C2—C1 | 125.1 (4) | C13—C12—H12 | 118.9 |
N2—C2—C1 | 122.6 (4) | C14—C13—C12 | 121.6 (5) |
C4—C3—C8 | 120.6 (4) | C14—C13—H13 | 119.2 |
C4—C3—N1 | 130.7 (4) | C12—C13—H13 | 119.2 |
C8—C3—N1 | 108.7 (4) | C13—C14—C15 | 117.1 (6) |
C5—C4—C3 | 116.9 (4) | C13—C14—H14 | 121.4 |
C5—C4—H4 | 121.6 | C15—C14—H14 | 121.4 |
C3—C4—H4 | 121.6 | N5—C15—C14 | 129.9 (5) |
C4—C5—C6 | 121.8 (5) | N5—C15—C10 | 108.8 (4) |
C4—C5—H5 | 119.1 | C14—C15—C10 | 121.3 (5) |
N1i—Hg1—N1—C2 | 86.5 (4) | C9—N2—C8—C7 | −0.3 (8) |
Cl1i—Hg1—N1—C2 | −24.0 (4) | C2—N2—C8—C3 | 0.3 (5) |
Cl1—Hg1—N1—C2 | −159.3 (3) | C9—N2—C8—C3 | −180.0 (4) |
N1i—Hg1—N1—C3 | −83.5 (3) | C4—C3—C8—C7 | 0.2 (7) |
Cl1i—Hg1—N1—C3 | 166.0 (3) | N1—C3—C8—C7 | 179.9 (4) |
Cl1—Hg1—N1—C3 | 30.7 (4) | C4—C3—C8—N2 | 179.9 (4) |
C10—N3—N4—N5 | 0.3 (6) | N1—C3—C8—N2 | −0.3 (5) |
C9—N3—N4—N5 | −178.6 (4) | N4—N3—C9—N2 | −128.3 (4) |
N3—N4—N5—C15 | −0.3 (6) | C10—N3—C9—N2 | 53.1 (7) |
C3—N1—C2—N2 | 0.0 (5) | C2—N2—C9—N3 | −116.4 (5) |
Hg1—N1—C2—N2 | −171.7 (3) | C8—N2—C9—N3 | 63.9 (6) |
C3—N1—C2—C1 | −179.6 (4) | N4—N3—C10—C15 | −0.2 (5) |
Hg1—N1—C2—C1 | 8.7 (7) | C9—N3—C10—C15 | 178.5 (5) |
C8—N2—C2—N1 | −0.2 (5) | N4—N3—C10—C11 | −179.2 (5) |
C9—N2—C2—N1 | −179.9 (4) | C9—N3—C10—C11 | −0.4 (9) |
C8—N2—C2—C1 | 179.4 (4) | N3—C10—C11—C12 | 179.7 (5) |
C9—N2—C2—C1 | −0.3 (7) | C15—C10—C11—C12 | 0.8 (7) |
C2—N1—C3—C4 | 180.0 (5) | C10—C11—C12—C13 | 0.3 (8) |
Hg1—N1—C3—C4 | −8.4 (7) | C11—C12—C13—C14 | −1.0 (8) |
C2—N1—C3—C8 | 0.2 (5) | C12—C13—C14—C15 | 0.4 (8) |
Hg1—N1—C3—C8 | 171.9 (3) | N4—N5—C15—C14 | −179.2 (5) |
C8—C3—C4—C5 | −0.8 (7) | N4—N5—C15—C10 | 0.1 (6) |
N1—C3—C4—C5 | 179.5 (4) | C13—C14—C15—N5 | −180.0 (5) |
C3—C4—C5—C6 | 1.2 (7) | C13—C14—C15—C10 | 0.8 (8) |
C4—C5—C6—C7 | −1.1 (8) | N3—C10—C15—N5 | 0.0 (5) |
C5—C6—C7—C8 | 0.5 (7) | C11—C10—C15—N5 | 179.2 (4) |
C6—C7—C8—N2 | −179.7 (5) | N3—C10—C15—C14 | 179.4 (4) |
C6—C7—C8—C3 | 0.0 (7) | C11—C10—C15—C14 | −1.4 (8) |
C2—N2—C8—C7 | −180.0 (5) |
Symmetry code: (i) −x+1, y, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [HgCl2(C15H13N5)2] |
Mr | 798.10 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 293 |
a, b, c (Å) | 15.612 (3), 12.883 (3), 14.751 (3) |
β (°) | 97.49 (3) |
V (Å3) | 2941.5 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 5.46 |
Crystal size (mm) | 0.22 × 0.18 × 0.16 |
Data collection | |
Diffractometer | Rigaku Saturn724 diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku/MSC, 2006) |
Tmin, Tmax | 0.380, 0.476 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14609, 2587, 2379 |
Rint | 0.051 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.036, 0.062, 1.09 |
No. of reflections | 2587 |
No. of parameters | 196 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.57, −0.47 |
Computer programs: CrystalClear (Rigaku/MSC, 2006), CrystalClear (Rigaku/MSC , 2006), SHELXS97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Acknowledgements
The authors thank Professor Hou Hong-Wei of Zhengzhou University for his help.
References
Fan, J., Zhu, H. F., Okamura, T., Sun, W. Y., Tang, W. X. & Ueyama, N. (2003). Inorg. Chem. 42, 158–162. Web of Science CSD CrossRef PubMed CAS Google Scholar
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Rigaku/MSC (2006). CrystalStructure. Rigaku/MSC, The Woodlands, Texas, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The complexation of metal ions by nitrogen heterocyclic compounds has been extensively studied. Owing to the unique ability of the heterocyclic compounds to form stable chelates with various coordiantion modes and its biological activity, many crystal ctructures have been determined (Fan, et al., 2003; Hoskins, et al. 1997; Makoto, et al.,2005). N-(2-methyl-benzoimidazol-3-yl-methyl)-benzotriazole, has the benzotriazole group and the benzoimidazole group and can offer possibilities to form complicated coordiantion compounds. However, the coordiantion chemistry and structural properties of metal complexes with the ligand has never been documented to data. In this paper, we reported the synthesis and crystal structure of the title compound, (I). In (I) (Fig. 1), the HgII atom is coordinated by two Cl atoms and two N atoms from the ligand to form a distorted tetrahedral coordination environment. Each ligand is coordianted to the Hg atom in a monodentate fashion. In the ligand, the benzotriazole group and benzotriazole group is bridged by a methylene, with an N—C—N angle of 111.3 (4)°. The benzotriazole group and the benzoimidazole group are almost perpendicular with each other, with the dihedral angle being 89.9°. Thus, two ligands are bridged by the Hg atom to form a cage-like compound.