organic compounds
5-(4-Fluorophenyl)-2,2,6-trimethyl-4H-1,3-dioxin-4-one
aDepartment of Chemistry, Universidade Federal de São Carlos, 13565-905 São Carlos, SP, Brazil, and bDepartamento de Farmácia, Faculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo-SP, Brazil
*Correspondence e-mail: julio@power.ufscar.br
The 1,3-dioxine ring in the title compound, C13H13FO3, is in a half-boat conformation with the methyl-bonded C atom 0.612 (2) Å out of the plane defined by the remaining five atoms.
Related literature
For synthetic and structural background, see: Caracelli et al. (2007); Stefani et al. (2007); Vieira et al. (2008). For see: Cremer & Pople (1975); Iulek & Zukerman-Schpector (1997).
Experimental
Crystal data
|
Data collection: CrystalClear (Rigaku/MSC 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809023666/ng2601sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809023666/ng2601Isup2.hkl
The H atoms were positioned with idealized geometry using a riding model with C—H = 0.93–0.96 Å, and with Uiso set to 1.2 times (1.5 for methyl) Ueq(parent atom).
Data collection: CrystalClear (Rigaku/MSC 2005); cell
CrystalClear (Rigaku/MSC, 2005); data reduction: CrystalClear (Rigaku/MSC 2005); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. The molecular structure of (I) showing atom labelling scheme and displacement ellipsoids at the 50% probability level (arbitrary spheres for the H atoms). |
C13H13FO3 | F(000) = 496 |
Mr = 236.23 | Dx = 1.393 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2836 reflections |
a = 11.865 (3) Å | θ = 2.8–40.2° |
b = 7.781 (2) Å | µ = 0.11 mm−1 |
c = 12.780 (4) Å | T = 98 K |
β = 107.369 (5)° | Prism, colourless |
V = 1126.1 (5) Å3 | 0.20 × 0.15 × 0.08 mm |
Z = 4 |
Rigaku AFC12/SATURN724 diffractometer | 2058 independent reflections |
Radiation source: fine-focus sealed tube | 1895 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.058 |
ω scans | θmax = 25.5°, θmin = 3.2° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −14→11 |
Tmin = 0.977, Tmax = 1 | k = −6→9 |
4071 measured reflections | l = −10→15 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.15 | w = 1/[σ2(Fo2) + (0.0872P)2 + 0.1727P] where P = (Fo2 + 2Fc2)/3 |
2058 reflections | (Δ/σ)max < 0.001 |
157 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
C13H13FO3 | V = 1126.1 (5) Å3 |
Mr = 236.23 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.865 (3) Å | µ = 0.11 mm−1 |
b = 7.781 (2) Å | T = 98 K |
c = 12.780 (4) Å | 0.20 × 0.15 × 0.08 mm |
β = 107.369 (5)° |
Rigaku AFC12/SATURN724 diffractometer | 2058 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1895 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 1 | Rint = 0.058 |
4071 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.150 | H-atom parameters constrained |
S = 1.15 | Δρmax = 0.32 e Å−3 |
2058 reflections | Δρmin = −0.25 e Å−3 |
157 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C2 | 0.63242 (13) | −0.0457 (2) | 0.70282 (12) | 0.0194 (4) | |
C4 | 0.70622 (13) | −0.1569 (2) | 0.56052 (13) | 0.0193 (4) | |
C5 | 0.71736 (13) | 0.0244 (2) | 0.53203 (12) | 0.0186 (4) | |
C6 | 0.65075 (13) | 0.1421 (2) | 0.56386 (12) | 0.0184 (4) | |
C7 | 0.79551 (13) | 0.0670 (2) | 0.46347 (12) | 0.0192 (4) | |
C8 | 0.77995 (14) | −0.0091 (2) | 0.36116 (13) | 0.0208 (4) | |
H8 | 0.7177 | −0.0854 | 0.3339 | 0.025* | |
C9 | 0.85535 (14) | 0.0266 (2) | 0.29960 (13) | 0.0237 (4) | |
H9 | 0.8447 | −0.0247 | 0.2316 | 0.028* | |
C10 | 0.94636 (15) | 0.1401 (2) | 0.34182 (14) | 0.0244 (4) | |
C11 | 0.96583 (14) | 0.2194 (2) | 0.44186 (14) | 0.0240 (4) | |
H11 | 1.0281 | 0.2960 | 0.4679 | 0.029* | |
C12 | 0.88968 (14) | 0.1817 (2) | 0.50293 (13) | 0.0216 (4) | |
H12 | 0.9014 | 0.2333 | 0.5710 | 0.026* | |
C13 | 0.53730 (14) | −0.0969 (2) | 0.75301 (13) | 0.0229 (4) | |
H13A | 0.5194 | −0.0014 | 0.7929 | 0.034* | |
H13B | 0.5644 | −0.1918 | 0.8021 | 0.034* | |
H13C | 0.4676 | −0.1301 | 0.6960 | 0.034* | |
C14 | 0.74870 (14) | −0.0007 (2) | 0.78687 (13) | 0.0224 (4) | |
H14A | 0.8081 | 0.0157 | 0.7507 | 0.034* | |
H14B | 0.7720 | −0.0924 | 0.8391 | 0.034* | |
H14C | 0.7397 | 0.1033 | 0.8241 | 0.034* | |
C15 | 0.63020 (15) | 0.3252 (2) | 0.52936 (13) | 0.0220 (4) | |
H15A | 0.6699 | 0.3502 | 0.4758 | 0.033* | |
H15B | 0.6605 | 0.3984 | 0.5920 | 0.033* | |
H15C | 0.5470 | 0.3450 | 0.4982 | 0.033* | |
O1 | 0.58727 (9) | 0.09857 (15) | 0.63304 (9) | 0.0209 (3) | |
O3 | 0.64762 (9) | −0.18821 (14) | 0.63603 (9) | 0.0198 (3) | |
O4 | 0.73951 (10) | −0.27917 (15) | 0.51946 (9) | 0.0251 (3) | |
F | 1.02109 (9) | 0.17542 (15) | 0.28148 (9) | 0.0337 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C2 | 0.0239 (8) | 0.0180 (8) | 0.0181 (8) | 0.0005 (6) | 0.0090 (6) | 0.0009 (6) |
C4 | 0.0173 (8) | 0.0235 (8) | 0.0169 (7) | −0.0010 (6) | 0.0046 (6) | −0.0016 (6) |
C5 | 0.0192 (7) | 0.0209 (8) | 0.0152 (8) | −0.0004 (6) | 0.0042 (6) | 0.0001 (6) |
C6 | 0.0175 (8) | 0.0226 (8) | 0.0153 (8) | −0.0019 (6) | 0.0049 (6) | −0.0002 (6) |
C7 | 0.0194 (8) | 0.0195 (8) | 0.0182 (8) | 0.0042 (6) | 0.0048 (6) | 0.0034 (6) |
C8 | 0.0215 (8) | 0.0197 (8) | 0.0208 (8) | 0.0021 (6) | 0.0056 (6) | 0.0005 (6) |
C9 | 0.0266 (8) | 0.0280 (9) | 0.0175 (8) | 0.0073 (7) | 0.0083 (6) | 0.0031 (7) |
C10 | 0.0211 (8) | 0.0305 (9) | 0.0246 (9) | 0.0076 (6) | 0.0115 (7) | 0.0092 (7) |
C11 | 0.0190 (8) | 0.0264 (8) | 0.0257 (9) | −0.0003 (6) | 0.0051 (6) | 0.0043 (7) |
C12 | 0.0211 (8) | 0.0242 (8) | 0.0188 (8) | 0.0021 (6) | 0.0050 (6) | 0.0019 (6) |
C13 | 0.0231 (8) | 0.0257 (9) | 0.0222 (8) | −0.0009 (6) | 0.0104 (7) | 0.0022 (7) |
C14 | 0.0253 (8) | 0.0252 (9) | 0.0181 (8) | −0.0027 (6) | 0.0085 (6) | −0.0005 (6) |
C15 | 0.0257 (8) | 0.0210 (8) | 0.0212 (8) | 0.0017 (6) | 0.0098 (6) | 0.0010 (6) |
O1 | 0.0231 (6) | 0.0218 (6) | 0.0205 (6) | 0.0022 (5) | 0.0106 (5) | 0.0030 (5) |
O3 | 0.0237 (6) | 0.0181 (6) | 0.0192 (6) | −0.0014 (4) | 0.0090 (5) | −0.0014 (5) |
O4 | 0.0313 (7) | 0.0208 (6) | 0.0265 (7) | 0.0005 (5) | 0.0140 (5) | −0.0027 (5) |
F | 0.0276 (6) | 0.0474 (7) | 0.0327 (6) | 0.0013 (5) | 0.0191 (5) | 0.0079 (5) |
C2—O1 | 1.4345 (19) | C9—H9 | 0.9300 |
C2—O3 | 1.4429 (19) | C10—F | 1.3655 (19) |
C2—C13 | 1.509 (2) | C10—C11 | 1.375 (3) |
C2—C14 | 1.515 (2) | C11—C12 | 1.390 (2) |
C4—O4 | 1.2081 (19) | C11—H11 | 0.9300 |
C4—O3 | 1.3691 (18) | C12—H12 | 0.9300 |
C4—C5 | 1.473 (2) | C13—H13A | 0.9600 |
C5—C6 | 1.349 (2) | C13—H13B | 0.9600 |
C5—C7 | 1.491 (2) | C13—H13C | 0.9600 |
C6—O1 | 1.3643 (18) | C14—H14A | 0.9600 |
C6—C15 | 1.490 (2) | C14—H14B | 0.9600 |
C7—C8 | 1.397 (2) | C14—H14C | 0.9600 |
C7—C12 | 1.401 (2) | C15—H15A | 0.9600 |
C8—C9 | 1.385 (2) | C15—H15B | 0.9600 |
C8—H8 | 0.9300 | C15—H15C | 0.9600 |
C9—C10 | 1.374 (3) | ||
O1—C2—O3 | 108.85 (12) | C10—C11—C12 | 118.05 (16) |
O1—C2—C13 | 106.44 (12) | C10—C11—H11 | 121.0 |
O3—C2—C13 | 106.87 (12) | C12—C11—H11 | 121.0 |
O1—C2—C14 | 110.59 (13) | C11—C12—C7 | 120.97 (15) |
O3—C2—C14 | 110.43 (12) | C11—C12—H12 | 119.5 |
C13—C2—C14 | 113.46 (13) | C7—C12—H12 | 119.5 |
O4—C4—O3 | 117.84 (14) | C2—C13—H13A | 109.5 |
O4—C4—C5 | 125.57 (15) | C2—C13—H13B | 109.5 |
O3—C4—C5 | 116.51 (14) | H13A—C13—H13B | 109.5 |
C6—C5—C4 | 118.14 (14) | C2—C13—H13C | 109.5 |
C6—C5—C7 | 123.34 (15) | H13A—C13—H13C | 109.5 |
C4—C5—C7 | 118.39 (14) | H13B—C13—H13C | 109.5 |
C5—C6—O1 | 120.89 (14) | C2—C14—H14A | 109.5 |
C5—C6—C15 | 128.21 (15) | C2—C14—H14B | 109.5 |
O1—C6—C15 | 110.85 (13) | H14A—C14—H14B | 109.5 |
C8—C7—C12 | 118.39 (14) | C2—C14—H14C | 109.5 |
C8—C7—C5 | 121.63 (14) | H14A—C14—H14C | 109.5 |
C12—C7—C5 | 119.94 (14) | H14B—C14—H14C | 109.5 |
C9—C8—C7 | 121.29 (15) | C6—C15—H15A | 109.5 |
C9—C8—H8 | 119.4 | C6—C15—H15B | 109.5 |
C7—C8—H8 | 119.4 | H15A—C15—H15B | 109.5 |
C10—C9—C8 | 118.12 (15) | C6—C15—H15C | 109.5 |
C10—C9—H9 | 120.9 | H15A—C15—H15C | 109.5 |
C8—C9—H9 | 120.9 | H15B—C15—H15C | 109.5 |
F—C10—C9 | 118.29 (16) | C6—O1—C2 | 114.91 (12) |
F—C10—C11 | 118.53 (15) | C4—O3—C2 | 117.38 (12) |
C9—C10—C11 | 123.18 (15) | ||
O4—C4—C5—C6 | 163.49 (15) | C8—C9—C10—C11 | 0.0 (3) |
O3—C4—C5—C6 | −13.0 (2) | F—C10—C11—C12 | −179.58 (14) |
O4—C4—C5—C7 | −12.6 (2) | C9—C10—C11—C12 | 0.3 (3) |
O3—C4—C5—C7 | 170.94 (12) | C10—C11—C12—C7 | −0.3 (2) |
C4—C5—C6—O1 | 8.8 (2) | C8—C7—C12—C11 | 0.2 (2) |
C7—C5—C6—O1 | −175.29 (13) | C5—C7—C12—C11 | 178.08 (14) |
C4—C5—C6—C15 | −168.39 (15) | C5—C6—O1—C2 | 25.3 (2) |
C7—C5—C6—C15 | 7.5 (3) | C15—C6—O1—C2 | −157.02 (13) |
C6—C5—C7—C8 | −120.06 (18) | O3—C2—O1—C6 | −52.77 (16) |
C4—C5—C7—C8 | 55.8 (2) | C13—C2—O1—C6 | −167.62 (12) |
C6—C5—C7—C12 | 62.1 (2) | C14—C2—O1—C6 | 68.72 (16) |
C4—C5—C7—C12 | −122.05 (16) | O4—C4—O3—C2 | 165.97 (14) |
C12—C7—C8—C9 | 0.1 (2) | C5—C4—O3—C2 | −17.28 (18) |
C5—C7—C8—C9 | −177.78 (14) | O1—C2—O3—C4 | 48.96 (16) |
C7—C8—C9—C10 | −0.2 (2) | C13—C2—O3—C4 | 163.53 (12) |
C8—C9—C10—F | 179.84 (14) | C14—C2—O3—C4 | −72.62 (16) |
Experimental details
Crystal data | |
Chemical formula | C13H13FO3 |
Mr | 236.23 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 98 |
a, b, c (Å) | 11.865 (3), 7.781 (2), 12.780 (4) |
β (°) | 107.369 (5) |
V (Å3) | 1126.1 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.20 × 0.15 × 0.08 |
Data collection | |
Diffractometer | Rigaku AFC12/SATURN724 diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.977, 1 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4071, 2058, 1895 |
Rint | 0.058 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.150, 1.15 |
No. of reflections | 2058 |
No. of parameters | 157 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.25 |
Computer programs: CrystalClear (Rigaku/MSC 2005), CrystalClear (Rigaku/MSC, 2005), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006), WinGX (Farrugia, 1999).
Acknowledgements
We thank FAPESP (07/59404–2 to HAS, 08/02531–5 to JZ-S and 06/50190-7 to ASV), CNPq (300613/2007 to HAS and 307121/2006–0 to JZ-S) and CAPES for financial support.
References
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As part of our on-going research interest efforts exploring the chemistry of potassium organotrifluoroborate salts including their potential use as intermediates in organic synthesis (Caracelli et al., 2007; Stefani et al., 2007; Vieira et al. 2008), herein the crystal structure of (I) is described. The molecular structure, Fig. 1, shows the six-membered ring to adopt a half-boat conformation with the C2 atom being 0.612 (2) Å out of the plane defined by the remaining five atoms. The ring-puckering parameters being q2 = 0.415 (2) Å, q3 = 0.189 (1) Å, Q = 0.456 (1) Å, and ϕ2 = 53.3 (2)°. The aryl ring is twisted with respect to the planar portion of the dioxin-4-one ring, as seen in the C4—C5—C7—C8 tosion angle of 55.8 (2)°.