organic compounds
(E)-N′-(5-Chloro-2-hydroxybenzylidene)-4-(8-quinolyloxy)butanohydrazide monohydrate
aCollege of Pharmacy, Gannan Medical University, Ganzhou, Jiangxi 341000, People's Republic of China
*Correspondence e-mail: zengjinggnmu@yahoo.cn
The crystal of the title Schiff base compound, C20H18ClN3O3·H2O, was twinned by a twofold rotation about (100). The contains two crystallographically independent molecules with similar conformations, and two water molecules. The C=N—N angles of 115.7 (6) and 116.2 (6)° are significantly smaller than the ideal value of 120° expected for sp2-hybridized N atoms and the dihedral angles between the benzene ring and quinoline ring system in the two molecules are 52.5 (7) and 53.9 (7)°. The molecules aggregate via C—Cl⋯π and π–π interactions [centroid–centroid distances = 3.696 (5)–3.892 (5) Å] and weak C—H⋯O interactions as parallel sheets, which are further linked by water molecules through N—H⋯O and O—H⋯O hydrogen bonds into a supramolecular two-dimensional network.
Related literature
For background to the rational construction of new matallosupramolecular architectures, see: Muraoka et al. (1998); Cai et al. (2003); Pallavicini et al. (2007). For the use of 8-hydroxyquinoline and its derivatives as ligands in this area, see: Chen et al. (2005); Park et al. (2006); Karmakar et al. (2007). For related structures, see: Xu et al. (2002); Zhang et al. (2005); Wen et al. (2005); Wei et al. (2004); Zheng, Li et al. (2008); Zheng, Wu, Lu et al., (2006); Zheng (2006); Zheng, Qiu et al. (2006); Zheng, Wu, Li et al. (2007); Xie et al. (2008); Chen & Li (2009). For comparative bond lengths, see: Allen et al. (1987). For hydrogen-bond motifs, see: Bernstein et al. (1995).
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809023733/pk2173sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809023733/pk2173Isup2.hkl
Reagents and solvents were of commercially available quality. The title complex was synthesized according to the method of Zheng, Li et al. 2008. 2-(quinolin-8-yloxy)butanehydrazide (0.01 mol), 5-chloro-2-hydroxybenzaldehyde (0.01 mol), ethanol (40 ml) and some drops of acetic acid were added to a 100 ml flask and refluxed for 6 h. After cooling to room temperature, the solid product was separated by filtration. Yellow single crystals suitable for X-ray diffraction were obtained by slow evaporation of a tetrahydrofuran solution over a period of 2 d.
All H atoms were placed in idealized positions (C—H = 0.93–0.97 Å, N—H = 0.86 Å, O—H = 0.82–0.85 Å) and refined as riding atoms with Uiso(H) = 1.2Ueq(C,N) and with Uiso(H) = 1.5Ueq(O).
Data collection: SMART (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure, with displacement ellipsoids at the 30% probability level. | |
Fig. 2. Part of the crystal structure showing hydrogen bonds as dashed lines. H atoms, except for those involved in hydrogen bonds, are not included. |
C20H18ClN3O3·H2O | F(000) = 1680 |
Mr = 401.84 | Dx = 1.397 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C -2yc | Cell parameters from 2234 reflections |
a = 11.167 (3) Å | θ = 2.6–18.8° |
b = 11.150 (3) Å | µ = 0.23 mm−1 |
c = 30.909 (10) Å | T = 295 K |
β = 96.970 (12)° | Block, yellow |
V = 3820 (2) Å3 | 0.32 × 0.15 × 0.10 mm |
Z = 8 |
Bruker SMART CCD area-detector diffractometer | 5912 independent reflections |
Radiation source: fine-focus sealed tube | 3796 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.093 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −13→13 |
Tmin = 0.929, Tmax = 0.977 | k = −12→13 |
17043 measured reflections | l = −32→36 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.079 | H-atom parameters constrained |
wR(F2) = 0.198 | w = 1/[σ2(Fo2) + (0.08P)2 + 4.5P] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max < 0.001 |
5912 reflections | Δρmax = 0.34 e Å−3 |
508 parameters | Δρmin = −0.32 e Å−3 |
2 restraints | Absolute structure: Flack (1983), 2525 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.08 (13) |
C20H18ClN3O3·H2O | V = 3820 (2) Å3 |
Mr = 401.84 | Z = 8 |
Monoclinic, Cc | Mo Kα radiation |
a = 11.167 (3) Å | µ = 0.23 mm−1 |
b = 11.150 (3) Å | T = 295 K |
c = 30.909 (10) Å | 0.32 × 0.15 × 0.10 mm |
β = 96.970 (12)° |
Bruker SMART CCD area-detector diffractometer | 5912 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3796 reflections with I > 2σ(I) |
Tmin = 0.929, Tmax = 0.977 | Rint = 0.093 |
17043 measured reflections |
R[F2 > 2σ(F2)] = 0.079 | H-atom parameters constrained |
wR(F2) = 0.198 | Δρmax = 0.34 e Å−3 |
S = 1.02 | Δρmin = −0.32 e Å−3 |
5912 reflections | Absolute structure: Flack (1983), 2525 Friedel pairs |
508 parameters | Absolute structure parameter: 0.08 (13) |
2 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.3021 (2) | 0.92993 (19) | −0.10155 (8) | 0.0771 (7) | |
Cl2 | 1.56704 (19) | 0.7328 (2) | 0.70372 (8) | 0.0731 (7) | |
N1 | 1.1629 (5) | 0.0908 (5) | 0.18110 (18) | 0.0446 (15) | |
N2 | 0.5924 (6) | 0.4429 (6) | 0.0353 (2) | 0.0564 (17) | |
H2 | 0.5800 | 0.4886 | 0.0568 | 0.068* | |
N3 | 0.5489 (5) | 0.4771 (6) | −0.0078 (2) | 0.0513 (16) | |
N4 | 0.6334 (6) | −0.0301 (6) | 0.4222 (2) | 0.0503 (16) | |
N5 | 1.0354 (6) | 0.4892 (6) | 0.5686 (2) | 0.0535 (17) | |
H5 | 1.0744 | 0.5082 | 0.5472 | 0.064* | |
N6 | 1.0823 (5) | 0.5171 (6) | 0.6110 (2) | 0.0520 (17) | |
O1 | 0.9426 (4) | 0.1745 (5) | 0.16115 (17) | 0.0575 (14) | |
O2 | 0.6701 (6) | 0.2718 (6) | 0.0137 (2) | 0.0782 (19) | |
O3 | 0.4881 (6) | 0.4409 (5) | −0.09162 (19) | 0.0696 (17) | |
H3 | 0.5252 | 0.4267 | −0.0676 | 0.084* | |
O4 | 0.7248 (5) | 0.1826 (4) | 0.44221 (16) | 0.0518 (13) | |
O5 | 0.8704 (6) | 0.4003 (6) | 0.59010 (19) | 0.079 (2) | |
O6 | 1.0749 (5) | 0.5481 (6) | 0.69511 (19) | 0.0669 (16) | |
H6 | 1.0486 | 0.5333 | 0.6697 | 0.100* | |
O7 | 1.1208 (5) | 0.1480 (5) | 0.08981 (17) | 0.0670 (16) | |
H29 | 1.1252 | 0.1199 | 0.1155 | 0.100* | |
H30 | 1.1950 | 0.1587 | 0.0878 | 0.100* | |
O8 | 0.7190 (5) | −0.0214 (6) | 0.51354 (18) | 0.0719 (17) | |
H31 | 0.6910 | −0.0115 | 0.4869 | 0.108* | |
H32 | 0.7045 | −0.0963 | 0.5137 | 0.108* | |
C1 | 0.9739 (7) | 0.1482 (7) | 0.2040 (2) | 0.0491 (19) | |
C2 | 0.9014 (7) | 0.1634 (7) | 0.2365 (3) | 0.052 (2) | |
H2A | 0.8245 | 0.1956 | 0.2299 | 0.062* | |
C3 | 0.9426 (7) | 0.1306 (7) | 0.2795 (3) | 0.0494 (19) | |
H3A | 0.8926 | 0.1405 | 0.3012 | 0.059* | |
C4 | 1.0553 (7) | 0.0845 (7) | 0.2896 (2) | 0.054 (2) | |
H4 | 1.0814 | 0.0616 | 0.3182 | 0.065* | |
C5 | 1.1329 (6) | 0.0711 (7) | 0.2572 (2) | 0.0494 (19) | |
C6 | 1.2504 (7) | 0.0246 (7) | 0.2659 (3) | 0.0471 (18) | |
H6A | 1.2801 | 0.0017 | 0.2941 | 0.057* | |
C7 | 1.3212 (7) | 0.0129 (7) | 0.2331 (2) | 0.050 (2) | |
H7 | 1.3993 | −0.0172 | 0.2384 | 0.060* | |
C8 | 1.2709 (7) | 0.0487 (7) | 0.1908 (3) | 0.053 (2) | |
H8 | 1.3189 | 0.0413 | 0.1683 | 0.064* | |
C9 | 1.0930 (6) | 0.1029 (6) | 0.2136 (2) | 0.0402 (17) | |
C10 | 0.8271 (7) | 0.2281 (7) | 0.1500 (2) | 0.0493 (19) | |
H10A | 0.8222 | 0.3022 | 0.1661 | 0.059* | |
H10B | 0.7647 | 0.1744 | 0.1577 | 0.059* | |
C11 | 0.8075 (7) | 0.2541 (7) | 0.1009 (2) | 0.051 (2) | |
H11A | 0.8709 | 0.3061 | 0.0930 | 0.061* | |
H11B | 0.8095 | 0.1799 | 0.0847 | 0.061* | |
C12 | 0.6870 (7) | 0.3139 (8) | 0.0903 (2) | 0.058 (2) | |
H12A | 0.6257 | 0.2627 | 0.1003 | 0.070* | |
H12B | 0.6876 | 0.3885 | 0.1065 | 0.070* | |
C13 | 0.6523 (7) | 0.3405 (8) | 0.0430 (3) | 0.056 (2) | |
C14 | 0.4998 (7) | 0.5818 (7) | −0.0120 (2) | 0.0495 (19) | |
H14 | 0.4960 | 0.6297 | 0.0125 | 0.059* | |
C15 | 0.4508 (6) | 0.6247 (6) | −0.0543 (2) | 0.0401 (16) | |
C16 | 0.4452 (7) | 0.5569 (7) | −0.0923 (3) | 0.055 (2) | |
C17 | 0.3957 (8) | 0.6009 (7) | −0.1314 (3) | 0.055 (2) | |
H17 | 0.3913 | 0.5530 | −0.1562 | 0.067* | |
C18 | 0.3512 (7) | 0.7182 (8) | −0.1345 (3) | 0.057 (2) | |
H18 | 0.3180 | 0.7498 | −0.1611 | 0.068* | |
C19 | 0.3579 (6) | 0.7847 (7) | −0.0974 (3) | 0.0482 (19) | |
C20 | 0.4057 (7) | 0.7447 (7) | −0.0576 (2) | 0.0503 (19) | |
H20 | 0.4091 | 0.7938 | −0.0331 | 0.060* | |
C21 | 0.6857 (6) | 0.1661 (7) | 0.3997 (2) | 0.0416 (17) | |
C22 | 0.6908 (7) | 0.2486 (7) | 0.3667 (2) | 0.0519 (19) | |
H22 | 0.7218 | 0.3249 | 0.3731 | 0.062* | |
C23 | 0.6492 (7) | 0.2178 (8) | 0.3234 (3) | 0.052 (2) | |
H23 | 0.6553 | 0.2735 | 0.3014 | 0.063* | |
C24 | 0.6010 (7) | 0.1103 (8) | 0.3132 (3) | 0.056 (2) | |
H24 | 0.5733 | 0.0922 | 0.2843 | 0.067* | |
C25 | 0.5925 (7) | 0.0266 (7) | 0.3452 (2) | 0.0475 (18) | |
C26 | 0.5430 (7) | −0.0906 (7) | 0.3365 (3) | 0.0495 (19) | |
H26 | 0.5114 | −0.1116 | 0.3083 | 0.059* | |
C27 | 0.5422 (8) | −0.1723 (7) | 0.3701 (3) | 0.055 (2) | |
H27 | 0.5105 | −0.2488 | 0.3647 | 0.066* | |
C28 | 0.5896 (7) | −0.1386 (8) | 0.4122 (3) | 0.055 (2) | |
H28 | 0.5906 | −0.1951 | 0.4344 | 0.066* | |
C29 | 0.6356 (6) | 0.0495 (8) | 0.3891 (2) | 0.0471 (19) | |
C30 | 0.7820 (7) | 0.2949 (7) | 0.4533 (3) | 0.054 (2) | |
H30A | 0.7255 | 0.3599 | 0.4458 | 0.065* | |
H30B | 0.8501 | 0.3055 | 0.4370 | 0.065* | |
C31 | 0.8249 (7) | 0.2981 (7) | 0.5017 (2) | 0.0491 (19) | |
H31A | 0.7567 | 0.2889 | 0.5181 | 0.059* | |
H31B | 0.8805 | 0.2325 | 0.5093 | 0.059* | |
C32 | 0.8867 (8) | 0.4158 (7) | 0.5129 (3) | 0.058 (2) | |
H32A | 0.8319 | 0.4805 | 0.5031 | 0.070* | |
H32B | 0.9564 | 0.4222 | 0.4971 | 0.070* | |
C33 | 0.9273 (7) | 0.4315 (8) | 0.5609 (3) | 0.055 (2) | |
C34 | 1.1874 (7) | 0.5652 (7) | 0.6160 (2) | 0.051 (2) | |
H34 | 1.2261 | 0.5797 | 0.5916 | 0.061* | |
C35 | 1.2463 (6) | 0.5970 (6) | 0.6576 (2) | 0.0432 (17) | |
C36 | 1.1891 (7) | 0.5900 (7) | 0.6968 (2) | 0.0480 (19) | |
C37 | 1.2494 (7) | 0.6258 (8) | 0.7354 (3) | 0.057 (2) | |
H37 | 1.2118 | 0.6202 | 0.7606 | 0.068* | |
C38 | 1.3654 (7) | 0.6702 (7) | 0.7381 (2) | 0.0488 (19) | |
H38 | 1.4055 | 0.6960 | 0.7646 | 0.059* | |
C39 | 1.4200 (7) | 0.6753 (7) | 0.7010 (3) | 0.054 (2) | |
C40 | 1.3609 (7) | 0.6448 (7) | 0.6612 (3) | 0.0502 (19) | |
H40 | 1.3985 | 0.6563 | 0.6363 | 0.060* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0964 (18) | 0.0496 (12) | 0.0808 (16) | 0.0246 (13) | −0.0072 (13) | 0.0021 (11) |
Cl2 | 0.0459 (11) | 0.0978 (17) | 0.0739 (14) | −0.0247 (12) | 0.0002 (10) | −0.0134 (13) |
N1 | 0.045 (4) | 0.049 (4) | 0.038 (4) | 0.004 (3) | 0.000 (3) | 0.001 (3) |
N2 | 0.055 (4) | 0.057 (4) | 0.055 (4) | 0.015 (3) | −0.004 (3) | 0.001 (3) |
N3 | 0.042 (4) | 0.054 (4) | 0.055 (4) | 0.010 (3) | −0.003 (3) | 0.008 (3) |
N4 | 0.050 (4) | 0.043 (4) | 0.056 (4) | −0.008 (3) | 0.000 (3) | −0.004 (3) |
N5 | 0.059 (4) | 0.057 (4) | 0.044 (4) | −0.010 (3) | 0.002 (3) | −0.017 (3) |
N6 | 0.041 (4) | 0.057 (4) | 0.055 (4) | −0.016 (3) | −0.004 (3) | −0.007 (3) |
O1 | 0.040 (3) | 0.083 (4) | 0.049 (3) | 0.017 (3) | 0.000 (2) | 0.002 (3) |
O2 | 0.108 (5) | 0.067 (4) | 0.057 (4) | 0.024 (4) | −0.003 (4) | −0.006 (3) |
O3 | 0.096 (5) | 0.045 (3) | 0.064 (4) | 0.025 (3) | −0.007 (3) | −0.009 (3) |
O4 | 0.065 (3) | 0.043 (3) | 0.045 (3) | −0.016 (3) | 0.001 (3) | −0.005 (2) |
O5 | 0.064 (4) | 0.126 (6) | 0.048 (4) | −0.026 (4) | 0.008 (3) | −0.018 (4) |
O6 | 0.048 (3) | 0.082 (4) | 0.070 (4) | −0.026 (3) | 0.009 (3) | −0.002 (4) |
O7 | 0.066 (4) | 0.078 (4) | 0.056 (4) | 0.006 (3) | 0.003 (3) | −0.004 (3) |
O8 | 0.067 (4) | 0.100 (5) | 0.049 (3) | −0.013 (3) | 0.007 (3) | −0.001 (3) |
C1 | 0.046 (5) | 0.057 (5) | 0.044 (5) | −0.001 (4) | 0.000 (4) | 0.015 (4) |
C2 | 0.047 (4) | 0.051 (5) | 0.058 (5) | 0.004 (4) | 0.009 (4) | −0.010 (4) |
C3 | 0.045 (5) | 0.055 (5) | 0.049 (5) | 0.008 (4) | 0.010 (4) | −0.001 (4) |
C4 | 0.058 (5) | 0.070 (5) | 0.034 (4) | 0.005 (4) | 0.006 (4) | −0.002 (4) |
C5 | 0.037 (4) | 0.063 (5) | 0.048 (5) | −0.001 (4) | 0.003 (3) | −0.004 (4) |
C6 | 0.043 (4) | 0.049 (5) | 0.048 (5) | −0.002 (4) | 0.000 (4) | 0.003 (4) |
C7 | 0.043 (4) | 0.056 (5) | 0.049 (5) | 0.000 (4) | −0.001 (4) | −0.013 (4) |
C8 | 0.049 (5) | 0.044 (4) | 0.068 (6) | 0.000 (4) | 0.011 (4) | −0.002 (4) |
C9 | 0.045 (4) | 0.036 (4) | 0.039 (4) | 0.001 (3) | 0.003 (3) | 0.002 (3) |
C10 | 0.043 (4) | 0.046 (4) | 0.056 (5) | 0.014 (4) | −0.002 (4) | 0.001 (4) |
C11 | 0.050 (5) | 0.039 (4) | 0.063 (5) | 0.006 (4) | 0.010 (4) | 0.007 (4) |
C12 | 0.060 (5) | 0.062 (5) | 0.048 (5) | 0.005 (4) | −0.010 (4) | 0.004 (4) |
C13 | 0.058 (5) | 0.048 (5) | 0.058 (6) | 0.005 (4) | −0.007 (4) | 0.007 (4) |
C14 | 0.051 (4) | 0.054 (5) | 0.042 (4) | 0.002 (4) | 0.001 (3) | −0.003 (4) |
C15 | 0.032 (4) | 0.045 (4) | 0.042 (4) | 0.006 (3) | 0.001 (3) | −0.004 (3) |
C16 | 0.051 (5) | 0.047 (5) | 0.066 (6) | 0.010 (4) | 0.006 (4) | −0.003 (4) |
C17 | 0.065 (5) | 0.059 (5) | 0.042 (5) | 0.008 (4) | 0.006 (4) | −0.012 (4) |
C18 | 0.045 (5) | 0.070 (6) | 0.052 (5) | 0.006 (4) | −0.008 (4) | 0.006 (4) |
C19 | 0.041 (4) | 0.050 (5) | 0.053 (5) | 0.000 (3) | 0.001 (4) | 0.000 (4) |
C20 | 0.053 (5) | 0.048 (4) | 0.050 (5) | 0.006 (4) | 0.004 (4) | −0.002 (4) |
C21 | 0.038 (4) | 0.053 (5) | 0.033 (4) | −0.001 (3) | 0.003 (3) | −0.005 (4) |
C22 | 0.055 (5) | 0.051 (5) | 0.046 (5) | −0.003 (4) | −0.007 (4) | −0.008 (4) |
C23 | 0.054 (5) | 0.052 (5) | 0.052 (5) | −0.005 (4) | 0.009 (4) | −0.007 (4) |
C24 | 0.048 (4) | 0.078 (6) | 0.043 (5) | 0.006 (4) | 0.002 (3) | 0.007 (4) |
C25 | 0.045 (4) | 0.050 (5) | 0.046 (5) | 0.001 (4) | −0.005 (3) | −0.004 (4) |
C26 | 0.050 (5) | 0.053 (5) | 0.042 (4) | −0.002 (4) | −0.010 (3) | −0.007 (4) |
C27 | 0.071 (6) | 0.035 (4) | 0.058 (6) | −0.005 (4) | 0.006 (4) | −0.012 (4) |
C28 | 0.061 (5) | 0.062 (5) | 0.043 (5) | 0.001 (4) | 0.009 (4) | 0.006 (4) |
C29 | 0.035 (4) | 0.073 (6) | 0.033 (4) | 0.004 (4) | 0.005 (3) | 0.005 (4) |
C30 | 0.042 (4) | 0.043 (5) | 0.078 (6) | 0.000 (3) | 0.012 (4) | 0.001 (4) |
C31 | 0.047 (4) | 0.054 (5) | 0.043 (5) | −0.006 (4) | −0.009 (3) | −0.008 (4) |
C32 | 0.059 (5) | 0.058 (5) | 0.055 (5) | −0.012 (4) | −0.002 (4) | −0.014 (4) |
C33 | 0.046 (5) | 0.068 (6) | 0.050 (5) | 0.005 (4) | 0.005 (4) | −0.014 (4) |
C34 | 0.049 (5) | 0.062 (5) | 0.042 (5) | 0.000 (4) | 0.004 (4) | 0.001 (4) |
C35 | 0.044 (4) | 0.038 (4) | 0.047 (4) | −0.003 (3) | 0.002 (3) | −0.003 (3) |
C36 | 0.050 (5) | 0.044 (4) | 0.049 (5) | 0.004 (3) | 0.004 (4) | 0.000 (4) |
C37 | 0.057 (5) | 0.074 (6) | 0.040 (5) | −0.004 (4) | 0.010 (4) | −0.003 (4) |
C38 | 0.042 (4) | 0.063 (5) | 0.041 (4) | 0.003 (4) | 0.004 (3) | −0.002 (4) |
C39 | 0.049 (5) | 0.062 (5) | 0.050 (5) | −0.006 (4) | 0.007 (4) | 0.000 (4) |
C40 | 0.050 (5) | 0.055 (5) | 0.045 (5) | −0.010 (4) | 0.002 (4) | 0.004 (4) |
Cl1—C19 | 1.735 (8) | C12—C13 | 1.495 (11) |
Cl2—C39 | 1.756 (8) | C12—H12A | 0.9700 |
N1—C8 | 1.295 (9) | C12—H12B | 0.9700 |
N1—C9 | 1.352 (8) | C14—C15 | 1.439 (10) |
N2—C13 | 1.329 (10) | C14—H14 | 0.9300 |
N2—N3 | 1.414 (9) | C15—C16 | 1.392 (10) |
N2—H2 | 0.8600 | C15—C20 | 1.428 (10) |
N3—C14 | 1.290 (9) | C16—C17 | 1.358 (11) |
N4—C28 | 1.328 (10) | C17—C18 | 1.398 (11) |
N4—C29 | 1.357 (9) | C17—H17 | 0.9300 |
N5—C33 | 1.363 (10) | C18—C19 | 1.360 (11) |
N5—N6 | 1.389 (8) | C18—H18 | 0.9300 |
N5—H5 | 0.8600 | C19—C20 | 1.357 (10) |
N6—C34 | 1.283 (9) | C20—H20 | 0.9300 |
O1—C1 | 1.359 (9) | C21—C22 | 1.380 (10) |
O1—C10 | 1.426 (8) | C21—C29 | 1.438 (11) |
O2—C13 | 1.221 (10) | C22—C23 | 1.403 (11) |
O3—C16 | 1.378 (9) | C22—H22 | 0.9300 |
O3—H3 | 0.8200 | C23—C24 | 1.336 (12) |
O4—C21 | 1.346 (8) | C23—H23 | 0.9300 |
O4—C30 | 1.429 (9) | C24—C25 | 1.374 (11) |
O5—C33 | 1.214 (9) | C24—H24 | 0.9300 |
O6—C36 | 1.353 (9) | C25—C29 | 1.405 (10) |
O6—H6 | 0.8200 | C25—C26 | 1.431 (11) |
O7—H29 | 0.8498 | C26—C27 | 1.383 (11) |
O7—H30 | 0.8474 | C26—H26 | 0.9300 |
O8—H31 | 0.8522 | C27—C28 | 1.395 (11) |
O8—H32 | 0.8505 | C27—H27 | 0.9300 |
C1—C2 | 1.375 (10) | C28—H28 | 0.9300 |
C1—C9 | 1.420 (10) | C30—C31 | 1.514 (11) |
C2—C3 | 1.401 (11) | C30—H30A | 0.9700 |
C2—H2A | 0.9300 | C30—H30B | 0.9700 |
C3—C4 | 1.361 (11) | C31—C32 | 1.504 (11) |
C3—H3A | 0.9300 | C31—H31A | 0.9700 |
C4—C5 | 1.410 (10) | C31—H31B | 0.9700 |
C4—H4 | 0.9300 | C32—C33 | 1.509 (11) |
C5—C6 | 1.407 (10) | C32—H32A | 0.9700 |
C5—C9 | 1.412 (9) | C32—H32B | 0.9700 |
C6—C7 | 1.365 (10) | C34—C35 | 1.414 (10) |
C6—H6A | 0.9300 | C34—H34 | 0.9300 |
C7—C8 | 1.418 (11) | C35—C40 | 1.377 (10) |
C7—H7 | 0.9300 | C35—C36 | 1.440 (10) |
C8—H8 | 0.9300 | C36—C37 | 1.359 (11) |
C10—C11 | 1.534 (10) | C37—C38 | 1.380 (11) |
C10—H10A | 0.9700 | C37—H37 | 0.9300 |
C10—H10B | 0.9700 | C38—C39 | 1.364 (11) |
C11—C12 | 1.502 (10) | C38—H38 | 0.9300 |
C11—H11A | 0.9700 | C39—C40 | 1.367 (11) |
C11—H11B | 0.9700 | C40—H40 | 0.9300 |
C8—N1—C9 | 118.1 (6) | C19—C18—H18 | 121.0 |
C13—N2—N3 | 120.5 (7) | C17—C18—H18 | 121.0 |
C13—N2—H2 | 119.7 | C20—C19—C18 | 124.2 (7) |
N3—N2—H2 | 119.7 | C20—C19—Cl1 | 118.2 (6) |
C14—N3—N2 | 115.7 (6) | C18—C19—Cl1 | 117.6 (6) |
C28—N4—C29 | 117.4 (7) | C19—C20—C15 | 117.9 (7) |
C33—N5—N6 | 119.6 (6) | C19—C20—H20 | 121.0 |
C33—N5—H5 | 120.2 | C15—C20—H20 | 121.0 |
N6—N5—H5 | 120.2 | O4—C21—C22 | 126.4 (7) |
C34—N6—N5 | 116.2 (6) | O4—C21—C29 | 114.7 (6) |
C1—O1—C10 | 116.4 (6) | C22—C21—C29 | 118.9 (7) |
C16—O3—H3 | 109.5 | C21—C22—C23 | 120.2 (7) |
C21—O4—C30 | 115.9 (6) | C21—C22—H22 | 119.9 |
C36—O6—H6 | 109.5 | C23—C22—H22 | 119.9 |
H29—O7—H30 | 100.0 | C24—C23—C22 | 121.5 (8) |
H31—O8—H32 | 95.0 | C24—C23—H23 | 119.2 |
O1—C1—C2 | 125.5 (7) | C22—C23—H23 | 119.2 |
O1—C1—C9 | 113.9 (6) | C23—C24—C25 | 120.0 (8) |
C2—C1—C9 | 120.6 (7) | C23—C24—H24 | 120.0 |
C1—C2—C3 | 120.4 (7) | C25—C24—H24 | 120.0 |
C1—C2—H2A | 119.8 | C24—C25—C29 | 121.8 (8) |
C3—C2—H2A | 119.8 | C24—C25—C26 | 122.9 (7) |
C4—C3—C2 | 120.4 (7) | C29—C25—C26 | 115.3 (7) |
C4—C3—H3A | 119.8 | C27—C26—C25 | 119.8 (7) |
C2—C3—H3A | 119.8 | C27—C26—H26 | 120.1 |
C3—C4—C5 | 120.5 (7) | C25—C26—H26 | 120.1 |
C3—C4—H4 | 119.8 | C26—C27—C28 | 119.1 (7) |
C5—C4—H4 | 119.8 | C26—C27—H27 | 120.4 |
C6—C5—C4 | 122.9 (7) | C28—C27—H27 | 120.4 |
C6—C5—C9 | 117.0 (6) | N4—C28—C27 | 123.4 (7) |
C4—C5—C9 | 120.1 (7) | N4—C28—H28 | 118.3 |
C7—C6—C5 | 120.3 (7) | C27—C28—H28 | 118.3 |
C7—C6—H6A | 119.9 | N4—C29—C25 | 124.9 (7) |
C5—C6—H6A | 119.9 | N4—C29—C21 | 117.5 (6) |
C6—C7—C8 | 117.3 (7) | C25—C29—C21 | 117.6 (7) |
C6—C7—H7 | 121.4 | O4—C30—C31 | 109.6 (6) |
C8—C7—H7 | 121.4 | O4—C30—H30A | 109.7 |
N1—C8—C7 | 124.7 (7) | C31—C30—H30A | 109.7 |
N1—C8—H8 | 117.7 | O4—C30—H30B | 109.7 |
C7—C8—H8 | 117.7 | C31—C30—H30B | 109.7 |
N1—C9—C5 | 122.7 (6) | H30A—C30—H30B | 108.2 |
N1—C9—C1 | 119.3 (6) | C32—C31—C30 | 109.2 (6) |
C5—C9—C1 | 118.0 (6) | C32—C31—H31A | 109.8 |
O1—C10—C11 | 109.6 (6) | C30—C31—H31A | 109.8 |
O1—C10—H10A | 109.8 | C32—C31—H31B | 109.8 |
C11—C10—H10A | 109.8 | C30—C31—H31B | 109.8 |
O1—C10—H10B | 109.8 | H31A—C31—H31B | 108.3 |
C11—C10—H10B | 109.8 | C31—C32—C33 | 113.7 (7) |
H10A—C10—H10B | 108.2 | C31—C32—H32A | 108.8 |
C12—C11—C10 | 108.5 (6) | C33—C32—H32A | 108.8 |
C12—C11—H11A | 110.0 | C31—C32—H32B | 108.8 |
C10—C11—H11A | 110.0 | C33—C32—H32B | 108.8 |
C12—C11—H11B | 110.0 | H32A—C32—H32B | 107.7 |
C10—C11—H11B | 110.0 | O5—C33—N5 | 122.6 (7) |
H11A—C11—H11B | 108.4 | O5—C33—C32 | 125.1 (7) |
C13—C12—C11 | 114.9 (7) | N5—C33—C32 | 112.2 (7) |
C13—C12—H12A | 108.5 | N6—C34—C35 | 122.2 (7) |
C11—C12—H12A | 108.5 | N6—C34—H34 | 118.9 |
C13—C12—H12B | 108.5 | C35—C34—H34 | 118.9 |
C11—C12—H12B | 108.5 | C40—C35—C34 | 119.8 (7) |
H12A—C12—H12B | 107.5 | C40—C35—C36 | 117.1 (7) |
O2—C13—N2 | 122.0 (8) | C34—C35—C36 | 123.0 (7) |
O2—C13—C12 | 123.7 (7) | O6—C36—C37 | 120.0 (7) |
N2—C13—C12 | 114.2 (8) | O6—C36—C35 | 119.9 (7) |
N3—C14—C15 | 120.2 (7) | C37—C36—C35 | 120.1 (7) |
N3—C14—H14 | 119.9 | C36—C37—C38 | 121.3 (7) |
C15—C14—H14 | 119.9 | C36—C37—H37 | 119.3 |
C16—C15—C20 | 118.1 (7) | C38—C37—H37 | 119.3 |
C16—C15—C14 | 124.1 (7) | C39—C38—C37 | 118.4 (8) |
C20—C15—C14 | 117.8 (6) | C39—C38—H38 | 120.8 |
C17—C16—O3 | 117.2 (7) | C37—C38—H38 | 120.8 |
C17—C16—C15 | 121.7 (7) | C38—C39—C40 | 122.0 (7) |
O3—C16—C15 | 121.1 (7) | C38—C39—Cl2 | 119.1 (6) |
C16—C17—C18 | 120.1 (7) | C40—C39—Cl2 | 118.7 (6) |
C16—C17—H17 | 119.9 | C39—C40—C35 | 120.8 (7) |
C18—C17—H17 | 119.9 | C39—C40—H40 | 119.6 |
C19—C18—C17 | 118.0 (7) | C35—C40—H40 | 119.6 |
C13—N2—N3—C14 | −175.2 (7) | C14—C15—C20—C19 | −179.0 (7) |
C33—N5—N6—C34 | 176.2 (7) | C30—O4—C21—C22 | −3.2 (10) |
C10—O1—C1—C2 | 3.4 (11) | C30—O4—C21—C29 | 176.2 (6) |
C10—O1—C1—C9 | −175.8 (6) | O4—C21—C22—C23 | 178.3 (7) |
O1—C1—C2—C3 | 178.7 (7) | C29—C21—C22—C23 | −1.0 (11) |
C9—C1—C2—C3 | −2.1 (11) | C21—C22—C23—C24 | 1.9 (12) |
C1—C2—C3—C4 | 0.7 (12) | C22—C23—C24—C25 | −0.7 (12) |
C2—C3—C4—C5 | 1.2 (12) | C23—C24—C25—C29 | −1.3 (12) |
C3—C4—C5—C6 | 179.6 (7) | C23—C24—C25—C26 | −179.4 (7) |
C3—C4—C5—C9 | −1.5 (12) | C24—C25—C26—C27 | 177.0 (8) |
C4—C5—C6—C7 | 179.5 (7) | C29—C25—C26—C27 | −1.2 (11) |
C9—C5—C6—C7 | 0.7 (11) | C25—C26—C27—C28 | 0.2 (12) |
C5—C6—C7—C8 | −0.3 (11) | C29—N4—C28—C27 | −2.6 (12) |
C9—N1—C8—C7 | 0.6 (11) | C26—C27—C28—N4 | 1.7 (13) |
C6—C7—C8—N1 | −0.4 (12) | C28—N4—C29—C25 | 1.5 (11) |
C8—N1—C9—C5 | −0.3 (10) | C28—N4—C29—C21 | −178.5 (7) |
C8—N1—C9—C1 | −179.6 (7) | C24—C25—C29—N4 | −177.9 (7) |
C6—C5—C9—N1 | −0.4 (11) | C26—C25—C29—N4 | 0.3 (11) |
C4—C5—C9—N1 | −179.3 (7) | C24—C25—C29—C21 | 2.1 (11) |
C6—C5—C9—C1 | 179.0 (7) | C26—C25—C29—C21 | −179.7 (7) |
C4—C5—C9—C1 | 0.1 (11) | O4—C21—C29—N4 | −0.3 (9) |
O1—C1—C9—N1 | 0.4 (10) | C22—C21—C29—N4 | 179.1 (6) |
C2—C1—C9—N1 | −178.9 (7) | O4—C21—C29—C25 | 179.7 (6) |
O1—C1—C9—C5 | −179.0 (6) | C22—C21—C29—C25 | −0.9 (10) |
C2—C1—C9—C5 | 1.7 (11) | C21—O4—C30—C31 | −177.9 (6) |
C1—O1—C10—C11 | 178.9 (6) | O4—C30—C31—C32 | 179.1 (6) |
O1—C10—C11—C12 | −178.3 (7) | C30—C31—C32—C33 | 176.8 (7) |
C10—C11—C12—C13 | −177.6 (7) | N6—N5—C33—O5 | −1.8 (12) |
N3—N2—C13—O2 | −1.4 (12) | N6—N5—C33—C32 | 176.2 (7) |
N3—N2—C13—C12 | −177.1 (7) | C31—C32—C33—O5 | −39.6 (12) |
C11—C12—C13—O2 | 40.8 (12) | C31—C32—C33—N5 | 142.4 (7) |
C11—C12—C13—N2 | −143.5 (8) | N5—N6—C34—C35 | −179.3 (7) |
N2—N3—C14—C15 | −179.0 (6) | N6—C34—C35—C40 | 177.8 (7) |
N3—C14—C15—C16 | 4.3 (11) | N6—C34—C35—C36 | −6.8 (12) |
N3—C14—C15—C20 | −175.3 (7) | C40—C35—C36—O6 | 177.6 (7) |
C20—C15—C16—C17 | −1.8 (11) | C34—C35—C36—O6 | 2.1 (11) |
C14—C15—C16—C17 | 178.6 (8) | C40—C35—C36—C37 | −2.2 (10) |
C20—C15—C16—O3 | 179.4 (7) | C34—C35—C36—C37 | −177.8 (7) |
C14—C15—C16—O3 | −0.3 (11) | O6—C36—C37—C38 | −179.3 (7) |
O3—C16—C17—C18 | −179.5 (7) | C35—C36—C37—C38 | 0.6 (12) |
C15—C16—C17—C18 | 1.6 (13) | C36—C37—C38—C39 | −1.4 (12) |
C16—C17—C18—C19 | −0.9 (12) | C37—C38—C39—C40 | 4.0 (12) |
C17—C18—C19—C20 | 0.5 (12) | C37—C38—C39—Cl2 | 179.4 (6) |
C17—C18—C19—Cl1 | −179.8 (6) | C38—C39—C40—C35 | −5.9 (12) |
C18—C19—C20—C15 | −0.7 (12) | Cl2—C39—C40—C35 | 178.7 (6) |
Cl1—C19—C20—C15 | 179.6 (5) | C34—C35—C40—C39 | −179.5 (7) |
C16—C15—C20—C19 | 1.3 (10) | C36—C35—C40—C39 | 4.8 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O7i | 0.86 | 2.07 | 2.836 (9) | 147 |
N5—H5···O8ii | 0.86 | 2.05 | 2.820 (9) | 149 |
O3—H3···N3 | 0.82 | 1.92 | 2.630 (8) | 144 |
O6—H6···N6 | 0.82 | 1.91 | 2.633 (9) | 147 |
O7—H29···N1 | 0.85 | 2.05 | 2.876 (8) | 165 |
O7—H30···O5iii | 0.85 | 2.06 | 2.839 (9) | 153 |
O8—H31···N4 | 0.85 | 2.04 | 2.872 (9) | 166 |
O8—H32···O2iv | 0.85 | 1.99 | 2.845 (9) | 180 |
C7—H7···O6iii | 0.93 | 2.53 | 3.267 (10) | 137 |
C27—H27···O3iv | 0.93 | 2.56 | 3.303 (10) | 137 |
C19—Cl1···Cg5v | 1.74 (1) | 3.63 (1) | 4.127 (9) | 94 (1) |
C39—Cl2···Cg1vi | 1.76 (1) | 3.62 (1) | 4.109 (9) | 93 (1) |
Symmetry codes: (i) x−1/2, y+1/2, z; (ii) x+1/2, y+1/2, z; (iii) x+1/2, −y+1/2, z−1/2; (iv) x, −y, z+1/2; (v) x, −y+1, z−1/2; (vi) x+1/2, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C20H18ClN3O3·H2O |
Mr | 401.84 |
Crystal system, space group | Monoclinic, Cc |
Temperature (K) | 295 |
a, b, c (Å) | 11.167 (3), 11.150 (3), 30.909 (10) |
β (°) | 96.970 (12) |
V (Å3) | 3820 (2) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.23 |
Crystal size (mm) | 0.32 × 0.15 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.929, 0.977 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 17043, 5912, 3796 |
Rint | 0.093 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.079, 0.198, 1.02 |
No. of reflections | 5912 |
No. of parameters | 508 |
No. of restraints | 2 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.34, −0.32 |
Absolute structure | Flack (1983), 2525 Friedel pairs |
Absolute structure parameter | 0.08 (13) |
Computer programs: SMART (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O7i | 0.86 | 2.07 | 2.836 (9) | 147.3 |
N5—H5···O8ii | 0.86 | 2.05 | 2.820 (9) | 148.5 |
O3—H3···N3 | 0.82 | 1.92 | 2.630 (8) | 144.0 |
O6—H6···N6 | 0.82 | 1.91 | 2.633 (9) | 147.1 |
O7—H29···N1 | 0.85 | 2.05 | 2.876 (8) | 165.1 |
O7—H30···O5iii | 0.85 | 2.06 | 2.839 (9) | 152.6 |
O8—H31···N4 | 0.85 | 2.04 | 2.872 (9) | 166.3 |
O8—H32···O2iv | 0.85 | 1.99 | 2.845 (9) | 179.6 |
C7—H7···O6iii | 0.93 | 2.53 | 3.267 (10) | 137 |
C27—H27···O3iv | 0.93 | 2.56 | 3.303 (10) | 137 |
C19—Cl1···Cg5v | 1.735 (8) | 3.632 (4) | 4.127 (9) | 93.8 (3) |
C39—Cl2···Cg1vi | 1.756 (8) | 3.616 (4) | 4.109 (9) | 93.3 (3) |
Symmetry codes: (i) x−1/2, y+1/2, z; (ii) x+1/2, y+1/2, z; (iii) x+1/2, −y+1/2, z−1/2; (iv) x, −y, z+1/2; (v) x, −y+1, z−1/2; (vi) x+1/2, −y+1/2, z+1/2. |
Acknowledgements
This work was supported by the Key Laboratory for Research and Development of Natural Drugs of Jiangxi Province.
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The rational construction of new matallosupramolecular architectures using logical combinations of rigid linear and angular components, has been the subject of much study during the last decade (Muraoka et al.,1998; Cai et al., 2003; Pallavicini et al., 2007). Most commonly, nitrogen heterocycles have been used to provide donors for coordination to metals within these assemblies, with pyridine rings being by far the most frequently used. More recently, flexible ligands have been employed to obtain access to topologies that are not available using more rigid ligands. Such flexibility can be introduced by means of combinations of methylene, ether, or thioether spacer groups between the donor sites, which permit the ligand to exist in various combinations as a result of rotations about single bonds. 8-Hydroxyquinoline and its derivatives are among the most extensively investigated ligands in this area (Xu et al., 2002; Cai et al., 2003; Chen et al., 2005; Park et al., 2006; Karmakar et al., 2007; Zhang et al., 2005; Wen et al., 2005, Wei et al., 2004; Zheng, Li et al., 2008). In this contribution, we present the synthesis and crystal structure of a new ligand, which contains oxygen and nitrogen donors and flexible aliphatic spacers.
The bond lengths and angles are in good agreement with expected values (Allen et al., 1987) and are comparable to those in the related compounds (Zheng, Wu, Lu et al., 2006; Zheng, 2006; Zheng, Wu, Li et al., 2007; Xie et al., 2008; Chen & Li, 2009). X-ray crystallography reveals that the title compound was twinned by a 2-fold rotation about (100). The crystals contain two crystallographically independent molecules with similar conformations, and two water molecules. The conformation along the C1—O1—C10—C11—C12—C13—N2—N3—C14—C15 and C21—O4—C30—C31—C32—C33—N5—N6—C34—C35 bond sequence are all trans (Fig.1). The C14—N3 and C34—N6 bond lengths of 1.290 (9) and 1.283 (9) Å respectively, indicate the presence of a typical C=N. The CN—N angle of 115.7 (6) and 116.2 (6)° are significantly smaller than the ideal value of 120° expected for sp2-hybridized N atoms and the dihedral angles between the benzene ring and quinoline ring system in the two molecules are 52.5 (7) and 53.9 (7)°. This is probably a consequence of repulsion between the nitrogen lone pairs and the adjacent N atom (Zheng, Qiu et al., 2006). All torsion angles involving non-H atoms are close to 180°, which indicates that the molecules are essentially planar with the C=N bond adjacent to the benzene ring and quinoline group adopting a trans configuration with respect to its substitution. In the crystal packing, intramolecular O—H···N hydrogen bonds produce S(6) ring motifs (Bernstein et al.,1995) and there are also significant π-stacking interactions between the planar sections associated with the benzene ring and quinoline group. The organic molecules aggregate via intermolecular weak C—Cl···π and π–π interactions between the benzene ring and quinoline rings [centroid-centroid distances in the range of 3.696 (5)–3.892 (5) Å] and weak C—H···O contacts into an array of parallel sheets, and these layers are further linked by water molecules via N—H···O and O—H···O hydrogen bonds into a supramolecular two dimensional network (Fig. 2 and Table 1).