metal-organic compounds
(S)-1-(1-Ferrocenylmethyl-1H-benzimidazol-2-yl)ethanol monohydrate
aOrdered Matter Science Research Center, College of Chemistry and Chemical Engineering, Southeast University, Nanjing 210096, People's Republic of China
*Correspondence e-mail: xiarong_103@yahoo.cn
In the structure of the title compound, [Fe(C5H5)(C15H15N2O)]·H2O, the unsubstituted cyclopentadiene (Cp) ring is disordered over two positions, with site-occupancy factors of 0.636 (12) and 0.364 (12). The dihedral angles between the planes of the substituted Cp ring and the major and minor components of the disordered ring are 0.8 (3) and 3.4 (6)°, respectively. The crystal packing is stabilized by intermolecular O—H⋯O hydrogen bonds, forming zigzag chains running parallel to the a axis.
Related literature
For applications of ferrocene compounds, see: Savage et al. (2006); Carr et al. (2001). For the biological and pharmaceutical activity of imidazole and benzimidazole derivatives, see: Matsuno et al. (2000); Garuti et al. (1999). For the synthesis and of (±)-1-(1H-benzimidazol-2-yl)ethanol, see: Xia & Xu (2008).
Experimental
Crystal data
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Data collection: CrystalClear (Rigaku, 2005); cell CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809023575/rz2334sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809023575/rz2334Isup2.hkl
The title compound was synthesized by the reaction of L-(-)-1-(1H-benzimidazol-2-yl)ethanol (10 mmol) with a solution of FeCH2N+(CH3)3I- (10 mmol) in water (20 ml) at 105 °C. L-(-)-1-(1H-Benzimidazol-2-yl)ethanol was synthesized by the reaction of benzene-1,2-diamine and ethyl L-(-)-lactate at 115°C according to the literature method (Xia & Xu, 2008). Crystals suitable for X-ray
were obtained by slow evaporation of a methanol solution at room temperature over a period of one week.All H atoms were fixed geometrically and treated as riding, with C—H = 0.93-0.98 Å, O—H = 0.82-0.85 Å and with Uiso(H) = 1.2Ueq(C) or 1.5Ueq(C, O) for methyl, hydroxyl and water H atoms. The C1—C5 cyclopentadiene ring is disordered over two positions, with refined site-occupancy factors of 0.636 (12) and 0.364 (12) for the major and minor components respectively. During the
of the disordered cyclopentadiene ring, soft proximity (SIMU) and rigid-bond restraints (DELU) were applied to the anisotropic displacement parameters.Data collection: CrystalClear (Rigaku, 2005); cell
CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).[Fe(C5H5)(C15H15N2O)]·H2O | F(000) = 792 |
Mr = 378.25 | Dx = 1.349 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 4425 reflections |
a = 7.678 (5) Å | θ = 2.7–27.5° |
b = 12.480 (8) Å | µ = 0.83 mm−1 |
c = 19.428 (12) Å | T = 293 K |
V = 1862 (2) Å3 | Block, colourless |
Z = 4 | 0.40 × 0.35 × 0.30 mm |
Rigaku SCXmini diffractometer | 4236 independent reflections |
Radiation source: fine-focus sealed tube | 3622 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 2.7° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −16→16 |
Tmin = 0.724, Tmax = 0.785 | l = −25→25 |
19049 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.043 | H-atom parameters constrained |
wR(F2) = 0.113 | w = 1/[σ2(Fo2) + (0.0566P)2 + 0.1498P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max < 0.001 |
4236 reflections | Δρmax = 0.32 e Å−3 |
243 parameters | Δρmin = −0.21 e Å−3 |
146 restraints | Absolute structure: Flack (1983), 1811 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.03 (2) |
[Fe(C5H5)(C15H15N2O)]·H2O | V = 1862 (2) Å3 |
Mr = 378.25 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.678 (5) Å | µ = 0.83 mm−1 |
b = 12.480 (8) Å | T = 293 K |
c = 19.428 (12) Å | 0.40 × 0.35 × 0.30 mm |
Rigaku SCXmini diffractometer | 4236 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 3622 reflections with I > 2σ(I) |
Tmin = 0.724, Tmax = 0.785 | Rint = 0.042 |
19049 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | H-atom parameters constrained |
wR(F2) = 0.113 | Δρmax = 0.32 e Å−3 |
S = 1.05 | Δρmin = −0.21 e Å−3 |
4236 reflections | Absolute structure: Flack (1983), 1811 Friedel pairs |
243 parameters | Absolute structure parameter: 0.03 (2) |
146 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Fe1 | 0.12377 (5) | 0.11965 (3) | 0.10136 (2) | 0.05548 (14) | |
C1 | 0.2965 (13) | 0.2388 (10) | 0.0874 (6) | 0.076 (2) | 0.636 (12) |
H1 | 0.3040 | 0.3018 | 0.1128 | 0.092* | 0.636 (12) |
C2 | 0.3868 (13) | 0.1411 (10) | 0.1064 (6) | 0.088 (2) | 0.636 (12) |
H2 | 0.4582 | 0.1309 | 0.1445 | 0.105* | 0.636 (12) |
C3 | 0.3440 (15) | 0.0626 (9) | 0.0545 (6) | 0.090 (2) | 0.636 (12) |
H3 | 0.3799 | −0.0085 | 0.0519 | 0.108* | 0.636 (12) |
C4 | 0.2340 (16) | 0.1193 (11) | 0.0081 (5) | 0.087 (2) | 0.636 (12) |
H4 | 0.1888 | 0.0883 | −0.0316 | 0.104* | 0.636 (12) |
C5 | 0.198 (2) | 0.2298 (13) | 0.0278 (7) | 0.081 (2) | 0.636 (12) |
H5 | 0.1278 | 0.2805 | 0.0063 | 0.097* | 0.636 (12) |
C1' | 0.344 (2) | 0.218 (2) | 0.0982 (13) | 0.076 (2) | 0.364 (12) |
H1' | 0.3815 | 0.2628 | 0.1333 | 0.092* | 0.364 (12) |
C2' | 0.384 (3) | 0.104 (2) | 0.0815 (11) | 0.088 (2) | 0.364 (12) |
H2' | 0.4599 | 0.0594 | 0.1059 | 0.105* | 0.364 (12) |
C3' | 0.294 (3) | 0.0763 (17) | 0.0258 (12) | 0.090 (2) | 0.364 (12) |
H3' | 0.3024 | 0.0082 | 0.0068 | 0.108* | 0.364 (12) |
C4' | 0.187 (3) | 0.1529 (19) | −0.0023 (11) | 0.087 (2) | 0.364 (12) |
H4' | 0.1092 | 0.1521 | −0.0391 | 0.104* | 0.364 (12) |
C5' | 0.236 (4) | 0.233 (2) | 0.0447 (15) | 0.081 (2) | 0.364 (12) |
H5' | 0.1904 | 0.3009 | 0.0384 | 0.097* | 0.364 (12) |
C6 | 0.0499 (5) | 0.0507 (3) | 0.19164 (17) | 0.0656 (8) | |
H6 | 0.1226 | 0.0277 | 0.2270 | 0.079* | |
C7 | −0.0067 (6) | −0.0118 (3) | 0.1347 (2) | 0.0781 (10) | |
H7 | 0.0243 | −0.0825 | 0.1260 | 0.094* | |
C8 | −0.1161 (5) | 0.0507 (3) | 0.09454 (18) | 0.0714 (8) | |
H8 | −0.1717 | 0.0286 | 0.0544 | 0.086* | |
C9 | −0.1290 (4) | 0.1537 (3) | 0.12467 (16) | 0.0617 (7) | |
H9 | −0.1943 | 0.2108 | 0.1080 | 0.074* | |
C10 | −0.0239 (3) | 0.1541 (2) | 0.18508 (14) | 0.0490 (6) | |
C11 | −0.0006 (4) | 0.2455 (2) | 0.23385 (14) | 0.0553 (7) | |
H11A | 0.0989 | 0.2317 | 0.2633 | 0.066* | |
H11B | 0.0226 | 0.3105 | 0.2081 | 0.066* | |
C12 | −0.2966 (4) | 0.3248 (2) | 0.25873 (14) | 0.0531 (7) | |
C13 | −0.3238 (4) | 0.3941 (3) | 0.20362 (16) | 0.0636 (8) | |
H13A | −0.2437 | 0.4009 | 0.1680 | 0.076* | |
C14 | −0.4778 (5) | 0.4525 (3) | 0.2051 (2) | 0.0791 (11) | |
H14A | −0.5003 | 0.5008 | 0.1698 | 0.095* | |
C15 | −0.6005 (6) | 0.4410 (4) | 0.2581 (2) | 0.0918 (12) | |
H15A | −0.7020 | 0.4818 | 0.2571 | 0.110* | |
C16 | −0.5738 (5) | 0.3712 (4) | 0.3111 (2) | 0.0827 (10) | |
H16A | −0.6565 | 0.3628 | 0.3457 | 0.099* | |
C17 | −0.4184 (4) | 0.3126 (3) | 0.31211 (16) | 0.0632 (8) | |
C18 | −0.1993 (4) | 0.2124 (3) | 0.33753 (15) | 0.0601 (7) | |
C19 | −0.0719 (5) | 0.1412 (3) | 0.37575 (19) | 0.0757 (10) | |
H19A | −0.0051 | 0.1004 | 0.3417 | 0.091* | |
C20 | −0.1628 (7) | 0.0627 (4) | 0.4224 (3) | 0.1130 (17) | |
H20A | −0.0778 | 0.0186 | 0.4451 | 0.169* | |
H20B | −0.2393 | 0.0183 | 0.3957 | 0.169* | |
H20C | −0.2292 | 0.1011 | 0.4563 | 0.169* | |
N1 | −0.1568 (3) | 0.2606 (2) | 0.27640 (11) | 0.0538 (6) | |
N2 | −0.3554 (4) | 0.2401 (2) | 0.36061 (13) | 0.0683 (7) | |
O1 | 0.0467 (4) | 0.2076 (3) | 0.41300 (18) | 0.0971 (9) | |
H1'' | 0.1441 | 0.1808 | 0.4120 | 0.146* | |
OW | 0.4102 (5) | 0.1890 (3) | 0.47061 (15) | 0.1251 (12) | |
HWB | 0.4440 | 0.2535 | 0.4746 | 0.188* | |
HWC | 0.3948 | 0.1621 | 0.5104 | 0.188* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Fe1 | 0.0499 (2) | 0.0611 (2) | 0.0554 (2) | 0.0041 (2) | 0.01120 (19) | 0.0056 (2) |
C1 | 0.042 (5) | 0.101 (5) | 0.086 (5) | −0.012 (3) | 0.007 (4) | 0.018 (4) |
C2 | 0.051 (2) | 0.129 (7) | 0.084 (6) | 0.007 (4) | 0.017 (4) | 0.021 (4) |
C3 | 0.072 (6) | 0.119 (4) | 0.079 (6) | 0.029 (3) | 0.028 (4) | 0.005 (4) |
C4 | 0.079 (7) | 0.124 (7) | 0.058 (4) | 0.009 (4) | 0.019 (3) | 0.016 (4) |
C5 | 0.068 (7) | 0.104 (3) | 0.071 (7) | −0.004 (4) | 0.012 (3) | 0.029 (4) |
C1' | 0.042 (5) | 0.101 (5) | 0.086 (5) | −0.012 (3) | 0.007 (4) | 0.018 (4) |
C2' | 0.051 (2) | 0.129 (7) | 0.084 (6) | 0.007 (4) | 0.017 (4) | 0.021 (4) |
C3' | 0.072 (6) | 0.119 (4) | 0.079 (6) | 0.029 (3) | 0.028 (4) | 0.005 (4) |
C4' | 0.079 (7) | 0.124 (7) | 0.058 (4) | 0.009 (4) | 0.019 (3) | 0.016 (4) |
C5' | 0.068 (7) | 0.104 (3) | 0.071 (7) | −0.004 (4) | 0.012 (3) | 0.029 (4) |
C6 | 0.0729 (19) | 0.0610 (17) | 0.0627 (18) | 0.0124 (15) | 0.0137 (16) | 0.0162 (15) |
C7 | 0.099 (3) | 0.0551 (18) | 0.081 (2) | −0.0086 (19) | 0.025 (2) | −0.0063 (17) |
C8 | 0.0674 (19) | 0.083 (2) | 0.0638 (18) | −0.0155 (18) | −0.002 (2) | −0.0108 (17) |
C9 | 0.0454 (14) | 0.083 (2) | 0.0564 (15) | 0.0054 (15) | −0.0020 (13) | −0.0046 (14) |
C10 | 0.0421 (13) | 0.0572 (15) | 0.0476 (13) | 0.0021 (11) | 0.0044 (11) | 0.0056 (12) |
C11 | 0.0479 (14) | 0.0623 (17) | 0.0559 (17) | 0.0006 (13) | −0.0042 (12) | 0.0015 (14) |
C12 | 0.0512 (15) | 0.0579 (16) | 0.0501 (15) | 0.0052 (13) | −0.0090 (12) | −0.0099 (12) |
C13 | 0.0656 (18) | 0.0669 (19) | 0.0582 (16) | 0.0019 (15) | −0.0125 (14) | −0.0036 (15) |
C14 | 0.080 (2) | 0.075 (2) | 0.082 (2) | 0.0162 (19) | −0.033 (2) | −0.0011 (19) |
C15 | 0.077 (3) | 0.099 (3) | 0.099 (3) | 0.031 (2) | −0.018 (2) | −0.020 (2) |
C16 | 0.066 (2) | 0.101 (3) | 0.081 (2) | 0.021 (2) | 0.0003 (18) | −0.021 (2) |
C17 | 0.0593 (18) | 0.0718 (19) | 0.0586 (17) | 0.0068 (14) | −0.0012 (14) | −0.0115 (16) |
C18 | 0.071 (2) | 0.0627 (18) | 0.0471 (14) | 0.0018 (15) | −0.0013 (14) | −0.0036 (13) |
C19 | 0.084 (2) | 0.077 (2) | 0.0655 (18) | 0.0096 (18) | −0.0145 (18) | 0.0093 (17) |
C20 | 0.129 (4) | 0.099 (3) | 0.111 (3) | −0.020 (3) | −0.046 (3) | 0.045 (3) |
N1 | 0.0567 (14) | 0.0597 (13) | 0.0449 (11) | 0.0061 (11) | −0.0005 (11) | −0.0005 (10) |
N2 | 0.0730 (17) | 0.0795 (17) | 0.0523 (13) | 0.0063 (15) | 0.0105 (14) | −0.0061 (12) |
O1 | 0.0643 (15) | 0.121 (2) | 0.106 (2) | −0.0134 (15) | −0.0203 (16) | 0.0323 (18) |
OW | 0.124 (3) | 0.177 (3) | 0.0739 (17) | 0.012 (3) | 0.0232 (18) | 0.0031 (19) |
Fe1—C5' | 1.98 (3) | C7—C8 | 1.387 (5) |
Fe1—C4 | 2.000 (10) | C7—H7 | 0.9300 |
Fe1—C1 | 2.011 (12) | C8—C9 | 1.416 (5) |
Fe1—C7 | 2.029 (4) | C8—H8 | 0.9300 |
Fe1—C10 | 2.029 (3) | C9—C10 | 1.424 (4) |
Fe1—C6 | 2.034 (3) | C9—H9 | 0.9300 |
Fe1—C8 | 2.037 (4) | C10—C11 | 1.494 (4) |
Fe1—C9 | 2.038 (3) | C11—N1 | 1.469 (4) |
Fe1—C3' | 2.036 (17) | C11—H11A | 0.9700 |
Fe1—C2 | 2.040 (10) | C11—H11B | 0.9700 |
Fe1—C2' | 2.05 (2) | C12—N1 | 1.383 (4) |
Fe1—C3 | 2.048 (8) | C12—C13 | 1.392 (4) |
C1—C5 | 1.388 (12) | C12—C17 | 1.404 (4) |
C1—C2 | 1.451 (13) | C13—C14 | 1.390 (5) |
C1—H1 | 0.9300 | C13—H13A | 0.9300 |
C2—C3 | 1.444 (14) | C14—C15 | 1.403 (6) |
C2—H2 | 0.9300 | C14—H14A | 0.9300 |
C3—C4 | 1.423 (10) | C15—C16 | 1.365 (6) |
C3—H3 | 0.9300 | C15—H15A | 0.9300 |
C4—C5 | 1.46 (2) | C16—C17 | 1.400 (5) |
C4—H4 | 0.9300 | C16—H16A | 0.9300 |
C5—H5 | 0.9300 | C17—N2 | 1.393 (4) |
C1'—C5' | 1.34 (2) | C18—N2 | 1.325 (4) |
C1'—C2' | 1.49 (3) | C18—N1 | 1.370 (4) |
C1'—H1' | 0.9300 | C18—C19 | 1.516 (5) |
C2'—C3' | 1.33 (2) | C19—O1 | 1.428 (5) |
C2'—H2' | 0.9300 | C19—C20 | 1.507 (6) |
C3'—C4' | 1.37 (2) | C19—H19A | 0.9800 |
C3'—H3' | 0.9300 | C20—H20A | 0.9600 |
C4'—C5' | 1.40 (4) | C20—H20B | 0.9600 |
C4'—H4' | 0.9300 | C20—H20C | 0.9600 |
C5'—H5' | 0.9300 | O1—H1'' | 0.8200 |
C6—C10 | 1.415 (4) | OW—HWB | 0.8501 |
C6—C7 | 1.421 (5) | OW—HWC | 0.8500 |
C6—H6 | 0.9300 | ||
C5'—Fe1—C4 | 46.8 (9) | Fe1—C1'—H1' | 125.5 |
C5'—Fe1—C1 | 27.6 (8) | C3'—C2'—C1' | 108.2 (18) |
C4—Fe1—C1 | 66.5 (5) | C3'—C2'—Fe1 | 70.5 (12) |
C5'—Fe1—C7 | 165.0 (8) | C1'—C2'—Fe1 | 70.4 (12) |
C4—Fe1—C7 | 119.8 (4) | C3'—C2'—H2' | 125.9 |
C1—Fe1—C7 | 165.2 (3) | C1'—C2'—H2' | 125.9 |
C5'—Fe1—C10 | 122.4 (9) | Fe1—C2'—H2' | 124.8 |
C4—Fe1—C10 | 164.4 (4) | C2'—C3'—C4' | 117 (2) |
C1—Fe1—C10 | 108.7 (4) | C2'—C3'—Fe1 | 71.4 (11) |
C7—Fe1—C10 | 68.85 (13) | C4'—C3'—Fe1 | 73.6 (13) |
C5'—Fe1—C6 | 154.1 (8) | C2'—C3'—H3' | 121.4 |
C4—Fe1—C6 | 153.9 (4) | C4'—C3'—H3' | 121.4 |
C1—Fe1—C6 | 127.8 (4) | Fe1—C3'—H3' | 125.2 |
C7—Fe1—C6 | 40.95 (14) | C3'—C4'—C5' | 94.2 (18) |
C10—Fe1—C6 | 40.76 (12) | C3'—C4'—Fe1 | 67.7 (12) |
C5'—Fe1—C8 | 131.0 (7) | C5'—C4'—Fe1 | 65.2 (16) |
C4—Fe1—C8 | 108.8 (4) | C3'—C4'—H4' | 132.9 |
C1—Fe1—C8 | 154.1 (3) | C5'—C4'—H4' | 132.9 |
C7—Fe1—C8 | 39.88 (15) | Fe1—C4'—H4' | 125.9 |
C10—Fe1—C8 | 68.68 (13) | C1'—C5'—C4' | 125 (2) |
C6—Fe1—C8 | 68.00 (15) | C1'—C5'—Fe1 | 75.1 (16) |
C5'—Fe1—C9 | 112.9 (8) | C4'—C5'—Fe1 | 74.9 (17) |
C4—Fe1—C9 | 127.2 (4) | C1'—C5'—H5' | 117.5 |
C1—Fe1—C9 | 120.3 (3) | C4'—C5'—H5' | 117.5 |
C7—Fe1—C9 | 68.11 (16) | Fe1—C5'—H5' | 124.1 |
C10—Fe1—C9 | 41.00 (11) | C10—C6—C7 | 107.9 (3) |
C6—Fe1—C9 | 68.35 (13) | C10—C6—Fe1 | 69.42 (17) |
C8—Fe1—C9 | 40.68 (14) | C7—C6—Fe1 | 69.3 (2) |
C5'—Fe1—C3' | 60.7 (11) | C10—C6—H6 | 126.0 |
C4—Fe1—C3' | 22.4 (5) | C7—C6—H6 | 126.0 |
C1—Fe1—C3' | 71.2 (7) | Fe1—C6—H6 | 126.8 |
C7—Fe1—C3' | 109.4 (6) | C8—C7—C6 | 108.3 (3) |
C10—Fe1—C3' | 172.7 (8) | C8—C7—Fe1 | 70.4 (2) |
C6—Fe1—C3' | 133.4 (7) | C6—C7—Fe1 | 69.73 (19) |
C8—Fe1—C3' | 114.8 (6) | C8—C7—H7 | 125.8 |
C9—Fe1—C3' | 145.6 (7) | C6—C7—H7 | 125.8 |
C5'—Fe1—C2 | 60.2 (7) | Fe1—C7—H7 | 125.6 |
C4—Fe1—C2 | 68.0 (4) | C7—C8—C9 | 108.7 (3) |
C1—Fe1—C2 | 42.0 (3) | C7—C8—Fe1 | 69.7 (2) |
C7—Fe1—C2 | 125.4 (3) | C9—C8—Fe1 | 69.69 (19) |
C10—Fe1—C2 | 119.1 (4) | C7—C8—H8 | 125.7 |
C6—Fe1—C2 | 106.9 (3) | C9—C8—H8 | 125.7 |
C8—Fe1—C2 | 162.5 (4) | Fe1—C8—H8 | 126.5 |
C9—Fe1—C2 | 154.8 (4) | C8—C9—C10 | 107.7 (3) |
C3'—Fe1—C2 | 55.6 (6) | C8—C9—Fe1 | 69.6 (2) |
C5'—Fe1—C2' | 62.6 (10) | C10—C9—Fe1 | 69.17 (17) |
C4—Fe1—C2' | 54.3 (6) | C8—C9—H9 | 126.1 |
C1—Fe1—C2' | 53.3 (7) | C10—C9—H9 | 126.1 |
C7—Fe1—C2' | 117.7 (7) | Fe1—C9—H9 | 126.6 |
C10—Fe1—C2' | 135.9 (7) | C6—C10—C9 | 107.3 (3) |
C6—Fe1—C2' | 113.2 (6) | C6—C10—C11 | 126.2 (3) |
C8—Fe1—C2' | 146.1 (8) | C9—C10—C11 | 126.4 (3) |
C9—Fe1—C2' | 173.2 (8) | C6—C10—Fe1 | 69.82 (17) |
C3'—Fe1—C2' | 38.1 (7) | C9—C10—Fe1 | 69.83 (17) |
C2—Fe1—C2' | 18.9 (6) | C11—C10—Fe1 | 127.10 (19) |
C5'—Fe1—C3 | 69.0 (9) | N1—C11—C10 | 110.9 (2) |
C4—Fe1—C3 | 41.1 (3) | N1—C11—H11A | 109.5 |
C1—Fe1—C3 | 69.7 (5) | C10—C11—H11A | 109.5 |
C7—Fe1—C3 | 105.6 (3) | N1—C11—H11B | 109.5 |
C10—Fe1—C3 | 153.1 (4) | C10—C11—H11B | 109.5 |
C6—Fe1—C3 | 117.8 (4) | H11A—C11—H11B | 108.1 |
C8—Fe1—C3 | 124.8 (4) | N1—C12—C13 | 131.8 (3) |
C9—Fe1—C3 | 163.2 (4) | N1—C12—C17 | 105.7 (3) |
C3'—Fe1—C3 | 19.7 (5) | C13—C12—C17 | 122.4 (3) |
C2—Fe1—C3 | 41.4 (4) | C14—C13—C12 | 115.9 (3) |
C2'—Fe1—C3 | 22.5 (5) | C14—C13—H13A | 122.0 |
C5—C1—C2 | 113.8 (11) | C12—C13—H13A | 122.0 |
C5—C1—Fe1 | 72.1 (9) | C13—C14—C15 | 122.2 (4) |
C2—C1—Fe1 | 70.1 (6) | C13—C14—H14A | 118.9 |
C5—C1—H1 | 123.1 | C15—C14—H14A | 118.9 |
C2—C1—H1 | 123.1 | C16—C15—C14 | 121.2 (4) |
Fe1—C1—H1 | 126.5 | C16—C15—H15A | 119.4 |
C3—C2—C1 | 106.5 (8) | C14—C15—H15A | 119.4 |
C3—C2—Fe1 | 69.6 (5) | C15—C16—C17 | 118.2 (4) |
C1—C2—Fe1 | 68.0 (6) | C15—C16—H16A | 120.9 |
C3—C2—H2 | 126.8 | C17—C16—H16A | 120.9 |
C1—C2—H2 | 126.8 | N2—C17—C16 | 130.1 (3) |
Fe1—C2—H2 | 127.2 | N2—C17—C12 | 109.8 (3) |
C4—C3—C2 | 103.9 (8) | C16—C17—C12 | 120.1 (3) |
C4—C3—Fe1 | 67.6 (5) | N2—C18—N1 | 113.2 (3) |
C2—C3—Fe1 | 69.0 (5) | N2—C18—C19 | 124.8 (3) |
C4—C3—H3 | 128.0 | N1—C18—C19 | 121.9 (3) |
C2—C3—H3 | 128.0 | O1—C19—C20 | 111.6 (3) |
Fe1—C3—H3 | 126.9 | O1—C19—C18 | 108.6 (3) |
C3—C4—C5 | 114.6 (10) | C20—C19—C18 | 112.2 (4) |
C3—C4—Fe1 | 71.2 (5) | O1—C19—H19A | 108.1 |
C5—C4—Fe1 | 71.3 (8) | C20—C19—H19A | 108.1 |
C3—C4—H4 | 122.7 | C18—C19—H19A | 108.1 |
C5—C4—H4 | 122.7 | C19—C20—H20A | 109.5 |
Fe1—C4—H4 | 126.5 | C19—C20—H20B | 109.5 |
C1—C5—C4 | 101.1 (10) | H20A—C20—H20B | 109.5 |
C1—C5—Fe1 | 68.1 (8) | C19—C20—H20C | 109.5 |
C4—C5—Fe1 | 66.7 (8) | H20A—C20—H20C | 109.5 |
C1—C5—H5 | 129.4 | H20B—C20—H20C | 109.5 |
C4—C5—H5 | 129.4 | C18—N1—C12 | 106.5 (2) |
Fe1—C5—H5 | 127.2 | C18—N1—C11 | 128.8 (3) |
C5'—C1'—C2' | 95 (2) | C12—N1—C11 | 124.6 (2) |
C5'—C1'—Fe1 | 66.6 (17) | C18—N2—C17 | 104.7 (3) |
C2'—C1'—Fe1 | 67.4 (12) | C19—O1—H1'' | 109.5 |
C5'—C1'—H1' | 132.3 | HWB—OW—HWC | 109.5 |
C2'—C1'—H1' | 132.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
OW—HWB···O1i | 0.85 | 2.37 | 2.806 (5) | 112 |
O1—H1′′···OW | 0.82 | 2.34 | 3.016 (5) | 140 |
Symmetry code: (i) x+1/2, −y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Fe(C5H5)(C15H15N2O)]·H2O |
Mr | 378.25 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 293 |
a, b, c (Å) | 7.678 (5), 12.480 (8), 19.428 (12) |
V (Å3) | 1862 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.83 |
Crystal size (mm) | 0.40 × 0.35 × 0.30 |
Data collection | |
Diffractometer | Rigaku SCXmini diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.724, 0.785 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19049, 4236, 3622 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.113, 1.05 |
No. of reflections | 4236 |
No. of parameters | 243 |
No. of restraints | 146 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.21 |
Absolute structure | Flack (1983), 1811 Friedel pairs |
Absolute structure parameter | 0.03 (2) |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
OW—HWB···O1i | 0.85 | 2.37 | 2.806 (5) | 112.3 |
O1—H1''···OW | 0.82 | 2.34 | 3.016 (5) | 140.2 |
Symmetry code: (i) x+1/2, −y+1/2, −z+1. |
Acknowledgements
Financial support by the start-up fund of Southeast University is gratefully acknowledged.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The organometallic compound ferrocene has found several novel applications due to its stability, spectroscopic properties, electrochemical properties and ease of use (Savage et al., 2006). The ferrocene unit can affect the properties of the binding site and likewise binding event can affect the properties of ferrocene (Carr et al., 2001). Imidazole and benzimidazole derivatives are important heteroaromatic compounds and have attracted considerable attention because of their good biological and pharmaceutical activities (Matsuno et al., 2000; Garuti et al., 1999).
In the title compound (Fig. 1), the unsubstituted cyclopentadiene (Cp) ring is disordered over two positions, with site-occupancy factors of 0.636 (12) and 0.364 (12) for the major and minor components respectively. The dihedral angles between the substituted Cp ring and the major and minor components of the disordered ring are 0.8 (3)° and 3.4 (6)°, respectively. All bond lengths and angels are normal. The dihedral angle between the benzimidazole ring system and the substituted Cp ring is 72.92 (9)°. In the crystal structure (Fig. 2), the molecules are connected through intermolecular O—H···O hydrogen bonds (Table 1) to form zigzag chains running parallel to the a axis.