metal-organic compounds
Ethylenediammonium tetrabromidomercurate(II) monohydrate
aDepartment of Chemistry, Mangalore University, Mangalagangotri 574 199, Mangalore, India, bInstitute of Materials Science, Darmstadt University of Technology, Petersenstrasse 23, D-64287 Darmstadt, Germany, and cFaculty of Integrated Arts and Sciences, Tokushima University, Minamijosanjima-cho, Tokushima 770-8502, Japan
*Correspondence e-mail: gowdabt@yahoo.com
The HgII atoms in the of the title compound, (C2H10N2)[HgBr4]·H2O, are tetrahedrally coordinated by four Br atoms and the resulting [HgBr4]2− ions are interconnected to the [NH3—CH2—CH2—NH3]2+ ions and water molecules by N—H⋯Br and O—H⋯Br bonds, forming a three-dimensional network. N—H⋯O interactions are also present. The observed three different Hg—Br distances of 2.5597 (6), 2.6862 (8) and 2.6923 (8) Å in the tetrabromomercurate unit are due to the connection of Br atoms to different numbers of H atoms. The Hg, O and two Br atoms are located on a crystallographic mirror plane. The cation has symmetry with the center of the C—C bond lying on a crystallographic center of inversion.
Related literature
For synthetic methods, see: Furukawa et al. (2005). For background to Hg–halogen bonds, see: Ishihara et al. (2002); Furukawa et al. (2005). For a related structure, see: Terao et al. (2009).
Experimental
Crystal data
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Refinement
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Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S160053680902772X/bt5004sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S160053680902772X/bt5004Isup2.hkl
Ethylenediammonium tetrabromomercurate(II) monohydrate crystals were prepared by mixing equimolecular proportions of ethylenediammonium bromide and mercury(II) bomide into a methanol solution, followed by a successive evaporation of the solvent.
The H atom of the water molecule was located in difference map and was refined with restrained geometry, viz. the O—H distance was restrained to 0.85 (3) Å and H—H distance was restrained to 1.365 Å, thus leading to the angle of 107°. The other H atoms were positioned with idealized geometry using a riding model with N—H = 0.91 Å and C—H = 0.99 Å. All H atoms were refined with isotropic displacement parameters set to 1.2 times of the Ueq of the parent atom.
The residual electron-density features are located in the region of Hg1. The highest peak and the deepest hole are 0.91 and 0.71 Å from Hg1, respectivily.
Data collection: CrysAlis CCD (Oxford Diffraction, 2009); cell
CrysAlis RED (Oxford Diffraction, 2009); data reduction: CrysAlis RED (Oxford Diffraction, 2009); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. Molecular structure of (I), showing the atom labeling scheme. The displacement ellipsoids are drawn at the 50% probability level. The H atoms are represented as small spheres of arbitrary radii. | |
Fig. 2. Connection scheme of the HgBr4 terahedra with the connected [NH3—CH2—CH2—NH3]2+ ions, showing the different Hg—Br bonds. | |
Fig. 3. Packing diagram of (I) as viewed in the direction of a axis. |
(C2H10N2)[HgBr4]·H2O | F(000) = 532 |
Mr = 600.37 | Dx = 3.447 Mg m−3 |
Monoclinic, P21/m | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yb | Cell parameters from 1937 reflections |
a = 6.4976 (6) Å | θ = 2.6–27.9° |
b = 11.416 (1) Å | µ = 27.07 mm−1 |
c = 8.0161 (8) Å | T = 100 K |
β = 103.38 (1)° | Prism, colourless |
V = 578.47 (9) Å3 | 0.16 × 0.10 × 0.06 mm |
Z = 2 |
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 1240 independent reflections |
Radiation source: fine-focus sealed tube | 1159 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
Rotation method data acquisition using ω and ϕ scans | θmax = 26.4°, θmin = 2.6° |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | h = −8→7 |
Tmin = 0.052, Tmax = 0.197 | k = −10→14 |
2304 measured reflections | l = −10→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.024 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.062 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0387P)2 + 1.5899P] where P = (Fo2 + 2Fc2)/3 |
1240 reflections | (Δ/σ)max = 0.049 |
55 parameters | Δρmax = 2.00 e Å−3 |
3 restraints | Δρmin = −1.60 e Å−3 |
(C2H10N2)[HgBr4]·H2O | V = 578.47 (9) Å3 |
Mr = 600.37 | Z = 2 |
Monoclinic, P21/m | Mo Kα radiation |
a = 6.4976 (6) Å | µ = 27.07 mm−1 |
b = 11.416 (1) Å | T = 100 K |
c = 8.0161 (8) Å | 0.16 × 0.10 × 0.06 mm |
β = 103.38 (1)° |
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector | 1240 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009) | 1159 reflections with I > 2σ(I) |
Tmin = 0.052, Tmax = 0.197 | Rint = 0.019 |
2304 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | 3 restraints |
wR(F2) = 0.062 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 2.00 e Å−3 |
1240 reflections | Δρmin = −1.60 e Å−3 |
55 parameters |
Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.8265 (7) | 0.0383 (4) | 0.2834 (5) | 0.0106 (9) | |
H1A | 0.8539 | −0.0264 | 0.2258 | 0.013* | |
H1B | 0.9046 | 0.0996 | 0.2595 | 0.013* | |
H1C | 0.6866 | 0.0563 | 0.2501 | 0.013* | |
C1 | 0.8833 (8) | 0.0144 (5) | 0.4718 (6) | 0.0118 (11) | |
H11 | 0.7985 | −0.0521 | 0.4984 | 0.014* | |
H12 | 0.8511 | 0.0840 | 0.5349 | 0.014* | |
Hg1 | 0.55745 (4) | 0.2500 | 0.75798 (4) | 0.01179 (11) | |
Br1 | 0.69952 (8) | 0.04665 (4) | 0.85916 (6) | 0.01038 (14) | |
Br2 | 0.50796 (11) | 0.2500 | 0.41588 (9) | 0.01061 (17) | |
Br3 | 0.15662 (11) | 0.2500 | 0.79637 (10) | 0.01234 (17) | |
O1 | 0.0198 (8) | 0.2500 | 0.1966 (7) | 0.0125 (11) | |
H1O | 0.032 (9) | 0.1920 (13) | 0.127 (5) | 0.015* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.017 (2) | 0.006 (2) | 0.008 (2) | 0.0032 (17) | 0.0007 (18) | 0.0019 (17) |
C1 | 0.018 (3) | 0.011 (2) | 0.007 (2) | 0.005 (2) | 0.005 (2) | 0.001 (2) |
Hg1 | 0.01411 (17) | 0.00870 (16) | 0.01290 (17) | 0.000 | 0.00384 (11) | 0.000 |
Br1 | 0.0130 (3) | 0.0098 (3) | 0.0085 (2) | 0.00092 (19) | 0.00280 (19) | 0.00217 (19) |
Br2 | 0.0128 (3) | 0.0093 (3) | 0.0090 (3) | 0.000 | 0.0010 (3) | 0.000 |
Br3 | 0.0134 (4) | 0.0072 (3) | 0.0185 (4) | 0.000 | 0.0079 (3) | 0.000 |
O1 | 0.015 (3) | 0.010 (3) | 0.014 (3) | 0.000 | 0.005 (2) | 0.000 |
N1—C1 | 1.495 (6) | C1—H12 | 0.9900 |
N1—H1A | 0.9100 | Hg1—Br1ii | 2.5597 (6) |
N1—H1B | 0.9100 | Hg1—Br1 | 2.5597 (6) |
N1—H1C | 0.9100 | Hg1—Br2 | 2.6862 (8) |
C1—C1i | 1.515 (10) | Hg1—Br3 | 2.6923 (8) |
C1—H11 | 0.9900 | O1—H1O | 0.881 (19) |
C1—N1—H1A | 109.5 | N1—C1—H12 | 109.7 |
C1—N1—H1B | 109.5 | C1i—C1—H12 | 109.7 |
H1A—N1—H1B | 109.5 | H11—C1—H12 | 108.2 |
C1—N1—H1C | 109.5 | Br1ii—Hg1—Br1 | 130.16 (3) |
H1A—N1—H1C | 109.5 | Br1ii—Hg1—Br2 | 105.823 (15) |
H1B—N1—H1C | 109.5 | Br1—Hg1—Br2 | 105.823 (15) |
N1—C1—C1i | 109.7 (5) | Br1ii—Hg1—Br3 | 104.551 (15) |
N1—C1—H11 | 109.7 | Br1—Hg1—Br3 | 104.551 (15) |
C1i—C1—H11 | 109.7 | Br2—Hg1—Br3 | 103.08 (3) |
Symmetry codes: (i) −x+2, −y, −z+1; (ii) x, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Br3iii | 0.91 | 2.56 | 3.359 (5) | 147 |
N1—H1A···Br1i | 0.91 | 3.14 | 3.655 (5) | 118 |
N1—H1B···O1iv | 0.91 | 1.98 | 2.882 (5) | 169 |
N1—H1C···Br1iii | 0.91 | 2.72 | 3.482 (4) | 141 |
N1—H1C···Br2 | 0.91 | 2.95 | 3.503 (5) | 121 |
O1—H1O···Br3v | 0.88 (2) | 3.02 (3) | 3.521 (6) | 118 (2) |
Symmetry codes: (i) −x+2, −y, −z+1; (iii) −x+1, −y, −z+1; (iv) x+1, y, z; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | (C2H10N2)[HgBr4]·H2O |
Mr | 600.37 |
Crystal system, space group | Monoclinic, P21/m |
Temperature (K) | 100 |
a, b, c (Å) | 6.4976 (6), 11.416 (1), 8.0161 (8) |
β (°) | 103.38 (1) |
V (Å3) | 578.47 (9) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 27.07 |
Crystal size (mm) | 0.16 × 0.10 × 0.06 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2009) |
Tmin, Tmax | 0.052, 0.197 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2304, 1240, 1159 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.062, 1.11 |
No. of reflections | 1240 |
No. of parameters | 55 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 2.00, −1.60 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2009), CrysAlis RED (Oxford Diffraction, 2009), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Br3i | 0.91 | 2.56 | 3.359 (5) | 147.1 |
N1—H1A···Br1ii | 0.91 | 3.14 | 3.655 (5) | 118.0 |
N1—H1B···O1iii | 0.91 | 1.98 | 2.882 (5) | 168.5 |
N1—H1C···Br1i | 0.91 | 2.72 | 3.482 (4) | 141.3 |
N1—H1C···Br2 | 0.91 | 2.95 | 3.503 (5) | 120.5 |
O1—H1O···Br3iv | 0.881 (19) | 3.02 (3) | 3.521 (6) | 118 (2) |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) −x+2, −y, −z+1; (iii) x+1, y, z; (iv) x, y, z−1. |
Acknowledgements
BTG thanks the Alexander von Humboldt Foundation, Bonn, Germany, for resumption of his research fellowship.
References
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Hg atoms due to their soft nature are amenable to polarization and thus the Hg-halogen bonds are sensitive to the intermolecular interactions such as hydrogen bonding (Ishihara et al., 2002). This was evident in the halogen NQR of the Hg compounds in which the resonance frequencies are widely spread (Furukawa et al., 2005). Thus the study of the structure and bonding of this class of compounds is interesting. As a part of our studies in this direction (Terao et al., 2009), we report herein the crystal structure of ethylenediammonium tetrabromomercurate(II) monohydrate (I) (Fig. 1). In the structure, mercury atoms are tetrahedrally coordinated by four bromine atoms and the resulting HgBr4 tetrahedra are interconnected to the [NH3—CH2—CH2—NH3]2+ ions and water molecules by bromine-hydrogen bonds forming a three-dimensional network (Fig. 2). Three different Hg—Br distances observed [Hg—Br1 = 2.5597 (6) Å, Hg—Br2 = 2.6862 (8) Å and Hg—Br3 = 2.6923 (8) Å] establish the existence of three inequivalent Br atoms in the tetrabromomercurate unit. This may be due to the difference in intensity of N—H···Br and O—H···Br hydrogen bonding with different Br atoms. The packing diagram of the crystal structure, as viewed in the direction of a axis is shown in Fig. 3.