organic compounds
3-(6-Methyl-2-pyridyl)-2-phenoxy-3,4-dihydro-1,3,2-benzoxazaphosphirine 2-oxide
aDepartment of Physics, University of Jammu, Jammu Tawi 180 006, India, and bDepartment of Physics, S.V. University, Tirupati 517 502, India
*Correspondence e-mail: rk_paper@rediffmail.com
In the title compound, C19H17N2O3P, the six-membered 1,3,2-oxazaphosphorine ring adopts a twist-boat conformation with the phosphoryl O atom in an equatorial position. The P=O(oxide) bond length is 1.457 (1) Å and the average value of the P—O distances is 1.588 Å. The is stabilized by C—H⋯O and C—H⋯π interactions.
Related literature
For the chemistry of organophosphorus et al. (1977); Riffel et al. (1984); Kleemann & Fluck (1985); Bettemann et al. (1987); He et al. (1998).
see: PrzybylskiExperimental
Crystal data
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Data collection
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Refinement
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Data collection: CrysAlis Pro (Oxford Diffraction, 2007); cell CrysAlis Pro; data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Supporting information
10.1107/S1600536809029018/jh2088sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809029018/jh2088Isup2.hkl
The title compound was synthesized by adding a solution of phenylphosphorodichloridate (0.002 mole) in 25 ml of dry tetrahydrofuran dropwise over a period of twenty minutes to a stirred solution of 2-{[(6-methyl-2-pyridyl)amino]methyl}phenol (0.002 mole) and triethylamine (0.004 mole) in 30 ml of dry tetrahydrofuran at 0°C. After completion of the addition, the temperature of the reaction mixture was slowly raised to room temperature and stirred for 30 min. Later the reaction mixture was heated to 45–50°C and maintained at that temperature for three hours with stirring. Completion of the reaction was monitored by TLC analysis. Triethylamine- hydrochloride was separated from the reaction mixture by filtration and the solvent was removed under reduced pressure. The crude product was purified by
on silica gel (100–200 mesh) as adsorbent and ethyl acetate:hexane as to afford pure product. Suitable colourless transparent rectangular crystals were obtained from 2-propanol by slow evaporation technique.All hydrogen atoms were fixed as a riding model over their respective heavier atoms and refined isotropically with distance restraints 0.93–0.97 Å
Data collection: CrysAlis PRO (Oxford Diffraction, 2007); cell
CrysAlis PRO (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS86 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).Fig. 1. View of (I) (50% probability displacement ellipsoids) | |
Fig. 2. Depiction of C—H..O interactions in the title compound(I) |
C19H17N2O3P | F(000) = 736 |
Mr = 352.33 | Dx = 1.365 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 4064 reflections |
a = 9.2852 (7) Å | θ = 3.2–30.1° |
b = 14.2972 (11) Å | µ = 0.18 mm−1 |
c = 13.3446 (8) Å | T = 293 K |
β = 104.545 (7)° | Rectangular, colourless |
V = 1714.8 (2) Å3 | 0.30 × 0.24 × 0.18 mm |
Z = 4 |
Oxford Diffraction Xcalibur diffractometer | Rint = 0.017 |
ω–2θ scans | θmax = 30.1°, θmin = 3.2° |
14565 measured reflections | h = −13→13 |
4922 independent reflections | k = −19→20 |
4064 reflections with I > 2σ(I) | l = −18→18 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | 0 constraints |
R[F2 > 2σ(F2)] = 0.055 | H-atom parameters constrained |
wR(F2) = 0.149 | w = 1/[σ2(Fo2) + (0.0646P)2 + 0.9398P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max < 0.001 |
4922 reflections | Δρmax = 0.53 e Å−3 |
227 parameters | Δρmin = −0.35 e Å−3 |
C19H17N2O3P | V = 1714.8 (2) Å3 |
Mr = 352.33 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.2852 (7) Å | µ = 0.18 mm−1 |
b = 14.2972 (11) Å | T = 293 K |
c = 13.3446 (8) Å | 0.30 × 0.24 × 0.18 mm |
β = 104.545 (7)° |
Oxford Diffraction Xcalibur diffractometer | 4064 reflections with I > 2σ(I) |
14565 measured reflections | Rint = 0.017 |
4922 independent reflections |
R[F2 > 2σ(F2)] = 0.055 | 0 restraints |
wR(F2) = 0.149 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.53 e Å−3 |
4922 reflections | Δρmin = −0.35 e Å−3 |
227 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
O3 | 0.05137 (15) | 0.29221 (11) | 0.30611 (10) | 0.0431 (3) | |
P1 | 0.15450 (5) | 0.32614 (3) | 0.24817 (3) | 0.03212 (13) | |
O2 | 0.29805 (14) | 0.26052 (10) | 0.27286 (10) | 0.0408 (3) | |
N2 | 0.10589 (16) | 0.32584 (11) | 0.11909 (11) | 0.0342 (3) | |
N1 | −0.08432 (16) | 0.42593 (11) | 0.12856 (11) | 0.0366 (3) | |
O1 | 0.22025 (15) | 0.42756 (10) | 0.27690 (10) | 0.0409 (3) | |
C4 | −0.0855 (2) | 0.36620 (14) | −0.04067 (13) | 0.0391 (4) | |
H4 | −0.0437 | 0.3271 | −0.0814 | 0.047* | |
C13 | 0.40587 (19) | 0.26785 (13) | 0.21602 (14) | 0.0358 (4) | |
C5 | −0.02466 (18) | 0.37381 (12) | 0.06657 (13) | 0.0320 (3) | |
C8 | 0.35786 (19) | 0.27514 (13) | 0.10910 (14) | 0.0363 (4) | |
C3 | −0.2102 (2) | 0.41944 (15) | −0.08287 (15) | 0.0450 (4) | |
H3 | −0.2522 | 0.4182 | −0.1539 | 0.054* | |
C2 | −0.2726 (2) | 0.47435 (15) | −0.02010 (17) | 0.0471 (5) | |
H2 | −0.3565 | 0.5103 | −0.0482 | 0.057* | |
C9 | 0.4650 (2) | 0.27788 (16) | 0.05260 (15) | 0.0439 (4) | |
H9 | 0.436 | 0.2836 | −0.0191 | 0.053* | |
C1 | −0.2078 (2) | 0.47521 (14) | 0.08637 (16) | 0.0414 (4) | |
C11 | 0.6595 (2) | 0.26582 (18) | 0.21010 (19) | 0.0546 (5) | |
H11 | 0.7603 | 0.2627 | 0.2432 | 0.065* | |
C14 | 0.2129 (2) | 0.47435 (14) | 0.36794 (15) | 0.0417 (4) | |
C7 | 0.1947 (2) | 0.27754 (18) | 0.05690 (16) | 0.0496 (5) | |
H7A | 0.1803 | 0.309 | −0.0093 | 0.06* | |
H7B | 0.1586 | 0.2139 | 0.0436 | 0.06* | |
C10 | 0.6146 (2) | 0.27217 (16) | 0.10275 (18) | 0.0482 (5) | |
H10 | 0.6856 | 0.2726 | 0.0644 | 0.058* | |
C12 | 0.5546 (2) | 0.26421 (17) | 0.26780 (16) | 0.0499 (5) | |
H12 | 0.5836 | 0.2608 | 0.3397 | 0.06* | |
C19 | 0.1181 (3) | 0.5491 (2) | 0.3572 (3) | 0.0860 (10) | |
H19 | 0.0597 | 0.5665 | 0.2926 | 0.103* | |
C6 | −0.2732 (3) | 0.5295 (2) | 0.1604 (2) | 0.0663 (7) | |
H6A | −0.2875 | 0.4887 | 0.2143 | 0.099* | |
H6B | −0.3673 | 0.5554 | 0.1241 | 0.099* | |
H6C | −0.2068 | 0.5792 | 0.1904 | 0.099* | |
C16 | 0.2972 (7) | 0.5017 (3) | 0.5483 (3) | 0.1263 (18) | |
H16 | 0.3597 | 0.4863 | 0.6122 | 0.152* | |
C18 | 0.1120 (5) | 0.5980 (3) | 0.4456 (5) | 0.136 (2) | |
H18 | 0.0477 | 0.6486 | 0.4405 | 0.163* | |
C17 | 0.2005 (7) | 0.5726 (4) | 0.5416 (4) | 0.131 (2) | |
H17 | 0.1929 | 0.6044 | 0.6008 | 0.157* | |
C15 | 0.3051 (4) | 0.4509 (2) | 0.4605 (2) | 0.0841 (10) | |
H15 | 0.3724 | 0.4019 | 0.4653 | 0.101* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O3 | 0.0409 (7) | 0.0518 (8) | 0.0405 (7) | −0.0031 (6) | 0.0173 (5) | 0.0077 (6) |
P1 | 0.0333 (2) | 0.0364 (2) | 0.0278 (2) | −0.00139 (17) | 0.00979 (15) | 0.00310 (16) |
O2 | 0.0383 (6) | 0.0486 (8) | 0.0376 (6) | 0.0065 (6) | 0.0135 (5) | 0.0127 (6) |
N2 | 0.0328 (7) | 0.0418 (8) | 0.0282 (6) | 0.0032 (6) | 0.0079 (5) | −0.0012 (6) |
N1 | 0.0345 (7) | 0.0399 (8) | 0.0352 (7) | 0.0003 (6) | 0.0083 (6) | −0.0003 (6) |
O1 | 0.0492 (7) | 0.0427 (7) | 0.0329 (6) | −0.0091 (6) | 0.0145 (5) | −0.0034 (5) |
C4 | 0.0400 (9) | 0.0458 (10) | 0.0310 (8) | −0.0047 (8) | 0.0080 (7) | 0.0007 (7) |
C13 | 0.0346 (8) | 0.0349 (8) | 0.0392 (8) | 0.0019 (7) | 0.0117 (7) | 0.0049 (7) |
C5 | 0.0308 (7) | 0.0337 (8) | 0.0314 (7) | −0.0042 (6) | 0.0078 (6) | 0.0019 (6) |
C8 | 0.0342 (8) | 0.0379 (9) | 0.0377 (8) | 0.0003 (7) | 0.0107 (7) | −0.0025 (7) |
C3 | 0.0459 (10) | 0.0507 (11) | 0.0339 (9) | −0.0058 (8) | 0.0018 (7) | 0.0082 (8) |
C2 | 0.0395 (10) | 0.0432 (10) | 0.0534 (11) | 0.0020 (8) | 0.0017 (8) | 0.0109 (9) |
C9 | 0.0438 (10) | 0.0511 (11) | 0.0397 (9) | 0.0029 (8) | 0.0160 (8) | −0.0003 (8) |
C1 | 0.0385 (9) | 0.0375 (9) | 0.0475 (10) | 0.0004 (7) | 0.0096 (7) | 0.0000 (8) |
C11 | 0.0326 (9) | 0.0686 (15) | 0.0609 (13) | 0.0015 (9) | 0.0089 (9) | 0.0047 (11) |
C14 | 0.0473 (10) | 0.0404 (10) | 0.0404 (9) | −0.0088 (8) | 0.0165 (8) | −0.0073 (8) |
C7 | 0.0351 (9) | 0.0737 (15) | 0.0393 (9) | 0.0042 (9) | 0.0081 (7) | −0.0191 (10) |
C10 | 0.0389 (9) | 0.0512 (12) | 0.0597 (12) | −0.0003 (8) | 0.0221 (9) | 0.0022 (10) |
C12 | 0.0397 (10) | 0.0657 (14) | 0.0419 (10) | 0.0061 (9) | 0.0055 (8) | 0.0082 (9) |
C19 | 0.0632 (16) | 0.077 (2) | 0.114 (3) | 0.0136 (15) | 0.0152 (16) | −0.0319 (19) |
C6 | 0.0618 (14) | 0.0702 (17) | 0.0664 (15) | 0.0237 (13) | 0.0150 (12) | −0.0107 (13) |
C16 | 0.220 (5) | 0.113 (3) | 0.0428 (15) | −0.033 (4) | 0.028 (2) | −0.0242 (19) |
C18 | 0.104 (3) | 0.113 (3) | 0.209 (6) | −0.006 (3) | 0.075 (4) | −0.095 (4) |
C17 | 0.190 (5) | 0.115 (3) | 0.124 (4) | −0.075 (4) | 0.104 (4) | −0.083 (3) |
C15 | 0.129 (3) | 0.0735 (18) | 0.0397 (12) | 0.0134 (18) | 0.0022 (14) | −0.0051 (12) |
O3—P1 | 1.4567 (13) | C1—C6 | 1.500 (3) |
P1—O1 | 1.5825 (14) | C11—C12 | 1.385 (3) |
P1—O2 | 1.5953 (14) | C11—C10 | 1.391 (3) |
P1—N2 | 1.6675 (14) | C11—H11 | 0.93 |
O2—C13 | 1.404 (2) | C14—C15 | 1.356 (3) |
N2—C5 | 1.416 (2) | C14—C19 | 1.369 (4) |
N2—C7 | 1.479 (2) | C7—H7A | 0.97 |
N1—C5 | 1.333 (2) | C7—H7B | 0.97 |
N1—C1 | 1.343 (2) | C10—H10 | 0.93 |
O1—C14 | 1.404 (2) | C12—H12 | 0.93 |
C4—C3 | 1.382 (3) | C19—C18 | 1.385 (5) |
C4—C5 | 1.405 (2) | C19—H19 | 0.93 |
C4—H4 | 0.93 | C6—H6A | 0.96 |
C13—C12 | 1.381 (3) | C6—H6B | 0.96 |
C13—C8 | 1.388 (2) | C6—H6C | 0.96 |
C8—C9 | 1.391 (2) | C16—C17 | 1.342 (7) |
C8—C7 | 1.501 (3) | C16—C15 | 1.396 (5) |
C3—C2 | 1.377 (3) | C16—H16 | 0.93 |
C3—H3 | 0.93 | C18—C17 | 1.384 (8) |
C2—C1 | 1.397 (3) | C18—H18 | 0.93 |
C2—H2 | 0.93 | C17—H17 | 0.93 |
C9—C10 | 1.385 (3) | C15—H15 | 0.93 |
C9—H9 | 0.93 | ||
O3—P1—O1 | 116.20 (8) | C10—C11—H11 | 119.9 |
O3—P1—O2 | 108.72 (8) | C15—C14—C19 | 122.0 (3) |
O1—P1—O2 | 103.73 (8) | C15—C14—O1 | 120.9 (2) |
O3—P1—N2 | 120.26 (8) | C19—C14—O1 | 116.8 (2) |
O1—P1—N2 | 103.92 (7) | N2—C7—C8 | 112.96 (15) |
O2—P1—N2 | 101.96 (7) | N2—C7—H7A | 109 |
C13—O2—P1 | 121.11 (11) | C8—C7—H7A | 109 |
C5—N2—C7 | 118.48 (14) | N2—C7—H7B | 109 |
C5—N2—P1 | 119.09 (12) | C8—C7—H7B | 109 |
C7—N2—P1 | 122.43 (12) | H7A—C7—H7B | 107.8 |
C5—N1—C1 | 118.50 (15) | C9—C10—C11 | 120.42 (18) |
C14—O1—P1 | 123.14 (12) | C9—C10—H10 | 119.8 |
C3—C4—C5 | 117.00 (18) | C11—C10—H10 | 119.8 |
C3—C4—H4 | 121.5 | C13—C12—C11 | 118.40 (19) |
C5—C4—H4 | 121.5 | C13—C12—H12 | 120.8 |
C12—C13—C8 | 122.67 (17) | C11—C12—H12 | 120.8 |
C12—C13—O2 | 119.08 (16) | C14—C19—C18 | 117.9 (4) |
C8—C13—O2 | 118.21 (15) | C14—C19—H19 | 121 |
N1—C5—C4 | 123.51 (16) | C18—C19—H19 | 121 |
N1—C5—N2 | 113.65 (14) | C1—C6—H6A | 109.5 |
C4—C5—N2 | 122.83 (16) | C1—C6—H6B | 109.5 |
C13—C8—C9 | 118.07 (16) | H6A—C6—H6B | 109.5 |
C13—C8—C7 | 120.34 (16) | C1—C6—H6C | 109.5 |
C9—C8—C7 | 121.58 (17) | H6A—C6—H6C | 109.5 |
C2—C3—C4 | 120.22 (18) | H6B—C6—H6C | 109.5 |
C2—C3—H3 | 119.9 | C17—C16—C15 | 120.8 (4) |
C4—C3—H3 | 119.9 | C17—C16—H16 | 119.6 |
C3—C2—C1 | 118.98 (18) | C15—C16—H16 | 119.6 |
C3—C2—H2 | 120.5 | C17—C18—C19 | 120.9 (4) |
C1—C2—H2 | 120.5 | C17—C18—H18 | 119.5 |
C10—C9—C8 | 120.23 (18) | C19—C18—H18 | 119.5 |
C10—C9—H9 | 119.9 | C16—C17—C18 | 119.4 (3) |
C8—C9—H9 | 119.9 | C16—C17—H17 | 120.3 |
N1—C1—C2 | 121.71 (18) | C18—C17—H17 | 120.3 |
N1—C1—C6 | 116.08 (18) | C14—C15—C16 | 118.8 (4) |
C2—C1—C6 | 122.20 (19) | C14—C15—H15 | 120.6 |
C12—C11—C10 | 120.19 (18) | C16—C15—H15 | 120.6 |
C12—C11—H11 | 119.9 |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O3i | 0.93 | 2.57 | 3.497 (3) | 174 |
C9—H9···O2i | 0.93 | 2.82 | 3.706 (2) | 159 |
C7—H7A···O3i | 0.97 | 2.85 | 3.425 (2) | 119 |
C3—H3···O1ii | 0.93 | 2.81 | 3.373 (3) | 120 |
C11—H11···O3iii | 0.93 | 2.66 | 3.561 (2) | 165 |
C6—H6C···O2iv | 0.96 | 2.81 | 3.443 (3) | 124 |
C18—H18···N2iv | 0.93 | 2.92 | 3.818 (5) | 163 |
C10—H10···Cg2iii | 0.93 | 2.78 | 3.437 (2) | 128 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x, −y+1, −z; (iii) x+1, y, z; (iv) −x, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C19H17N2O3P |
Mr | 352.33 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 9.2852 (7), 14.2972 (11), 13.3446 (8) |
β (°) | 104.545 (7) |
V (Å3) | 1714.8 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.18 |
Crystal size (mm) | 0.30 × 0.24 × 0.18 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14565, 4922, 4064 |
Rint | 0.017 |
(sin θ/λ)max (Å−1) | 0.705 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.055, 0.149, 1.08 |
No. of reflections | 4922 |
No. of parameters | 227 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.53, −0.35 |
Computer programs: CrysAlis PRO (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXS86 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O3i | 0.93 | 2.57 | 3.497 (3) | 174 |
C9—H9···O2i | 0.93 | 2.82 | 3.706 (2) | 159 |
C7—H7A···O3i | 0.97 | 2.85 | 3.425 (2) | 119 |
C3—H3···O1ii | 0.93 | 2.81 | 3.373 (3) | 120 |
C11—H11···O3iii | 0.93 | 2.66 | 3.561 (2) | 165 |
C6—H6C···O2iv | 0.96 | 2.81 | 3.443 (3) | 124 |
C18—H18···N2iv | 0.93 | 2.92 | 3.818 (5) | 163 |
C10—H10···Cg2iii | 0.93 | 2.78 | 3.437 (2) | 128 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x, −y+1, −z; (iii) x+1, y, z; (iv) −x, y+1/2, −z+1/2. |
Acknowledgements
The authors are grateful to the Department of Science and Technology of the Government of India for funding under research project SR/S2/CMP-47/2003.
References
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This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
Organophosphorus heterocycle compounds containing O and N in a six membered ring have gained much attention because of anti-cancer, anti-tumor and their most significant biological activities as pesticides and drugs(Riffel et al.1984, Kleemann et al.1985, Bettemann et al. 1987, He et al.1998).).
Various compounds of this class viz. cyclophosphamide(2-bis(2-chloroethyl)amino tetrahydro-2H-1,3,2-oxazaphosphorine 2-oxide),ifosfamide(3-(2-chloroethyl)-2-(2-chloroethylamino)tetrahydro-2H-1,3,1-oxazaphosphorine2-oxide) and trofosfamide(3-(2-chloroethyl)-2-(bis(2-chloroethyl)amino)tetrahydro-2H-1,3,2oxazaphosphorine2-oxide) act as antitumor agents (Przybylski et al.,1977).
Because of these significant properties of organophosphorus heterocycle compounds a new compound of this class, i.e., 3-(6-methyl-pyrindin-2-yl)-2-phenoxy-3, 4-dihydrobenzo[e][1,3,2]oxazaphosphirine 2-oxide[I] has been synthesized and its crystal structure is reported here.
In the title compound, [C19 H17 N2 O3 P], the six membered oxazaphosphorine ring adopts a twist boat conformation with phosphoryl oxygen atom at equatorial position. The PO(3) bond length is 1.457 (1)Å and the average value of P—O distance is 1.588 Å. The crystal structure is stabilized by C—H···O and C—H···Π interactions.