organic compounds
4-Amino-3-(p-tolyloxymethyl)-1H-1,2,4-triazole-5(4H)-thione
aX-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia, bSeQuent Scientific Limited, No. 120 A&B, Industrial Area, Baikampady, New Mangalore, Karnataka 575 011, India, and cDepartment of Chemistry, National Institute of Technology-Karnataka, Surathkal, Mangalore 575 025, India
*Correspondence e-mail: hkfun@usm.my
In the title triazole compound, C10H12N4OS, the triazole ring is essentially planar [maximum deviation = 0.009 (1) Å] and forms a dihedral angle of 5.78 (4)° with the benzene ring. In the molecules are linked into dimers by centrosymmetric N—H⋯S interactions. These dimers are linked into two-molecule-wide tapes by N—H⋯N and S⋯S [3.2634 (3) Å] interactions. In addition, they are further interconnected by weak N—H⋯S interactions into sheets parallel to the ab plane. The is further stabilized by weak intermolecular C—H⋯π interactions.
Related literature
For general background and applications of triazole derivatives, see: Amir et al. (2008); Kuş et al. (2008); Krzysztof et al. (2008); Padmavathi et al. (2008). For the preparation, see: Conti (1964). For related structures, see: Fun et al. (2008, 2009). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986).
Experimental
Crystal data
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Refinement
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Data collection: APEX2 (Bruker, 2005); cell SAINT (Bruker, 2005); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009).
Supporting information
10.1107/S1600536809027664/tk2497sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809027664/tk2497Isup2.hkl
P-Cresoloxyacetyl hydrazine (18.0 g, 0.10 mol) was added slowly to a solution of potassium hydroxide (8.4 g, 0.15 mol) in ethanol (150 ml). The resulting mixture was stirred well until a clear solution was obtained. Carbon disulphide (11.4 g, 0.15 mol) was added drop-wise and the contents were stirred vigorously. Further stirring was continued for 24 h. The resulting mixture was diluted with ether (100 ml) and the precipitate formed was collected by filtration, washed with dry ether and dried at 65 °C under vacuum. It was used for the next step without any purification.
A mixture of the above synthesized potassium dithiocarbazinate (29.4 g, 0.10 mol), hydrazine hydrate (99 %, 0.20 mol) and water (2 ml) was heated gently to boil for 30 minutes. Heating was continued until the evacuation of hydrogen sulphide ceased. The reaction mixture was cooled to room temperature, diluted with water (100 ml) and acidified with HCl. The solid mass that separated was collected by filtration, washed with water and dried. Recrystallization was achieved from ethanol (Conti, 1964). The yield was 14.63 g, 62 %. M.p. 461-463 K.
All the H atoms were located from difference Fourier map [range of C-H = 0.894 (15) - 1.011 (12) Å] and allowed to refine freely.
Data collection: APEX2 (Bruker, 2005); cell
SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).Fig. 1. The molecular structure of (I), showing 50% probability displacement ellipsoids and the atom-numbering scheme. | |
Fig. 2. Two-molecular-wide tapes connected by N—H···S, N—H···N and S···S interactions. The tapes form sheets parallel to the ab plane via weaker N—H···S interactions. Intermolecular interactions are shown as dashed bonds. |
C10H12N4OS | Z = 2 |
Mr = 236.30 | F(000) = 248 |
Triclinic, P1 | Dx = 1.456 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.9977 (1) Å | Cell parameters from 9925 reflections |
b = 6.4002 (1) Å | θ = 2.6–35.2° |
c = 15.5506 (2) Å | µ = 0.28 mm−1 |
α = 89.352 (1)° | T = 100 K |
β = 83.157 (1)° | Plate, colourless |
γ = 65.562 (1)° | 0.47 × 0.30 × 0.09 mm |
V = 539.11 (1) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 4712 independent reflections |
Radiation source: fine-focus sealed tube | 4228 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
ϕ and ω scans | θmax = 35.0°, θmin = 2.6° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −9→9 |
Tmin = 0.878, Tmax = 0.975 | k = −10→10 |
19910 measured reflections | l = −25→24 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.032 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0648P)2 + 0.0513P] where P = (Fo2 + 2Fc2)/3 |
4712 reflections | (Δ/σ)max = 0.001 |
193 parameters | Δρmax = 0.59 e Å−3 |
0 restraints | Δρmin = −0.33 e Å−3 |
C10H12N4OS | γ = 65.562 (1)° |
Mr = 236.30 | V = 539.11 (1) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.9977 (1) Å | Mo Kα radiation |
b = 6.4002 (1) Å | µ = 0.28 mm−1 |
c = 15.5506 (2) Å | T = 100 K |
α = 89.352 (1)° | 0.47 × 0.30 × 0.09 mm |
β = 83.157 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 4712 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 4228 reflections with I > 2σ(I) |
Tmin = 0.878, Tmax = 0.975 | Rint = 0.022 |
19910 measured reflections |
R[F2 > 2σ(F2)] = 0.032 | 0 restraints |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.59 e Å−3 |
4712 reflections | Δρmin = −0.33 e Å−3 |
193 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.84328 (3) | 0.26155 (3) | 0.040453 (11) | 0.01525 (6) | |
O1 | 0.06661 (10) | 1.12912 (9) | 0.24927 (4) | 0.01568 (10) | |
N1 | 0.49686 (12) | 0.89098 (11) | 0.14036 (4) | 0.01591 (11) | |
N2 | 0.69184 (11) | 0.71323 (11) | 0.09371 (4) | 0.01581 (11) | |
H1N2 | 0.820 (2) | 0.732 (2) | 0.0596 (9) | 0.024 (3)* | |
N3 | 0.43624 (11) | 0.57330 (10) | 0.13942 (4) | 0.01199 (10) | |
N4 | 0.30133 (12) | 0.43979 (11) | 0.15295 (4) | 0.01506 (11) | |
H1N4 | 0.405 (2) | 0.293 (3) | 0.1674 (9) | 0.023 (3)* | |
H2N4 | 0.258 (3) | 0.419 (3) | 0.1018 (10) | 0.035 (4)* | |
C1 | 0.66067 (12) | 0.51754 (12) | 0.09031 (4) | 0.01305 (11) | |
C2 | 0.34451 (12) | 0.79838 (12) | 0.16710 (4) | 0.01274 (11) | |
C3 | 0.09665 (12) | 0.91116 (11) | 0.21854 (5) | 0.01325 (11) | |
H3A | −0.034 (2) | 0.927 (2) | 0.1804 (8) | 0.018 (3)* | |
H3B | 0.086 (2) | 0.808 (2) | 0.2649 (8) | 0.016 (3)* | |
C4 | −0.16049 (12) | 1.26194 (12) | 0.29390 (4) | 0.01307 (12) | |
C5 | −0.34570 (13) | 1.18698 (13) | 0.31707 (5) | 0.01573 (12) | |
H5A | −0.333 (2) | 1.039 (2) | 0.2991 (9) | 0.026 (3)* | |
C6 | −0.56524 (13) | 1.33505 (13) | 0.36639 (5) | 0.01718 (13) | |
H6A | −0.682 (3) | 1.275 (2) | 0.3802 (9) | 0.027 (3)* | |
C7 | −0.60421 (13) | 1.55609 (12) | 0.39238 (5) | 0.01587 (13) | |
C8 | −0.41667 (15) | 1.62850 (13) | 0.36627 (5) | 0.01808 (13) | |
H8A | −0.443 (3) | 1.785 (3) | 0.3837 (9) | 0.028 (3)* | |
C9 | −0.19792 (14) | 1.48515 (12) | 0.31738 (5) | 0.01693 (13) | |
H9A | −0.070 (3) | 1.533 (3) | 0.2975 (10) | 0.031 (4)* | |
C10 | −0.83720 (14) | 1.71372 (15) | 0.44753 (5) | 0.02093 (15) | |
H10A | −0.902 (3) | 1.871 (3) | 0.4283 (11) | 0.042 (4)* | |
H10B | −0.971 (3) | 1.672 (3) | 0.4484 (11) | 0.046 (4)* | |
H10C | −0.807 (3) | 1.720 (3) | 0.5070 (12) | 0.049 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.01469 (9) | 0.01076 (8) | 0.01619 (9) | −0.00247 (6) | 0.00295 (6) | −0.00124 (6) |
O1 | 0.0137 (2) | 0.0113 (2) | 0.0208 (2) | −0.00540 (17) | 0.00364 (18) | −0.00495 (18) |
N1 | 0.0146 (2) | 0.0125 (2) | 0.0193 (3) | −0.0056 (2) | 0.0033 (2) | −0.0034 (2) |
N2 | 0.0138 (2) | 0.0134 (2) | 0.0194 (3) | −0.0062 (2) | 0.0036 (2) | −0.0032 (2) |
N3 | 0.0118 (2) | 0.0090 (2) | 0.0141 (2) | −0.00392 (18) | 0.00088 (18) | −0.00093 (18) |
N4 | 0.0165 (3) | 0.0110 (2) | 0.0186 (3) | −0.0073 (2) | 0.0007 (2) | 0.0000 (2) |
C1 | 0.0118 (2) | 0.0120 (3) | 0.0136 (3) | −0.0037 (2) | 0.0004 (2) | −0.0002 (2) |
C2 | 0.0130 (2) | 0.0099 (2) | 0.0139 (3) | −0.0038 (2) | 0.0002 (2) | −0.0013 (2) |
C3 | 0.0126 (3) | 0.0095 (2) | 0.0156 (3) | −0.0035 (2) | 0.0018 (2) | −0.0025 (2) |
C4 | 0.0125 (3) | 0.0106 (3) | 0.0143 (3) | −0.0035 (2) | 0.0008 (2) | −0.0015 (2) |
C5 | 0.0140 (3) | 0.0128 (3) | 0.0195 (3) | −0.0055 (2) | 0.0011 (2) | −0.0024 (2) |
C6 | 0.0134 (3) | 0.0163 (3) | 0.0199 (3) | −0.0051 (2) | 0.0015 (2) | −0.0026 (2) |
C7 | 0.0141 (3) | 0.0143 (3) | 0.0147 (3) | −0.0017 (2) | −0.0003 (2) | −0.0011 (2) |
C8 | 0.0192 (3) | 0.0113 (3) | 0.0204 (3) | −0.0041 (2) | 0.0018 (2) | −0.0028 (2) |
C9 | 0.0179 (3) | 0.0117 (3) | 0.0201 (3) | −0.0064 (2) | 0.0028 (2) | −0.0026 (2) |
C10 | 0.0164 (3) | 0.0199 (3) | 0.0193 (3) | −0.0011 (3) | 0.0014 (2) | −0.0041 (3) |
S1—C1 | 1.6812 (7) | C4—C5 | 1.3913 (10) |
O1—C4 | 1.3746 (8) | C4—C9 | 1.3970 (10) |
O1—C3 | 1.4119 (9) | C5—C6 | 1.4012 (10) |
N1—C2 | 1.3080 (9) | C5—H5A | 0.962 (14) |
N1—N2 | 1.3798 (9) | C6—C7 | 1.3915 (10) |
N2—C1 | 1.3432 (9) | C6—H6A | 0.930 (14) |
N2—H1N2 | 0.932 (13) | C7—C8 | 1.4011 (11) |
N3—C2 | 1.3657 (9) | C7—C10 | 1.5078 (10) |
N3—C1 | 1.3734 (9) | C8—C9 | 1.3868 (10) |
N3—N4 | 1.3988 (8) | C8—H8A | 0.984 (14) |
N4—H1N4 | 0.928 (14) | C9—H9A | 0.959 (14) |
N4—H2N4 | 0.894 (15) | C10—H10A | 0.975 (17) |
C2—C3 | 1.4875 (9) | C10—H10B | 0.944 (17) |
C3—H3A | 1.011 (12) | C10—H10C | 0.968 (18) |
C3—H3B | 0.986 (12) | ||
C4—O1—C3 | 115.53 (5) | O1—C4—C9 | 115.49 (6) |
C2—N1—N2 | 103.33 (6) | C5—C4—C9 | 119.96 (6) |
C1—N2—N1 | 113.75 (6) | C4—C5—C6 | 119.23 (7) |
C1—N2—H1N2 | 121.9 (9) | C4—C5—H5A | 122.9 (8) |
N1—N2—H1N2 | 123.5 (9) | C6—C5—H5A | 117.8 (8) |
C2—N3—C1 | 108.49 (6) | C7—C6—C5 | 121.82 (7) |
C2—N3—N4 | 122.95 (6) | C7—C6—H6A | 122.7 (9) |
C1—N3—N4 | 128.18 (6) | C5—C6—H6A | 115.4 (9) |
N3—N4—H1N4 | 109.3 (8) | C6—C7—C8 | 117.60 (7) |
N3—N4—H2N4 | 107.2 (10) | C6—C7—C10 | 122.01 (7) |
H1N4—N4—H2N4 | 104.5 (13) | C8—C7—C10 | 120.39 (7) |
N2—C1—N3 | 102.99 (6) | C9—C8—C7 | 121.62 (7) |
N2—C1—S1 | 130.61 (6) | C9—C8—H8A | 120.1 (8) |
N3—C1—S1 | 126.40 (5) | C7—C8—H8A | 118.3 (8) |
N1—C2—N3 | 111.41 (6) | C8—C9—C4 | 119.73 (7) |
N1—C2—C3 | 127.78 (6) | C8—C9—H9A | 122.7 (9) |
N3—C2—C3 | 120.78 (6) | C4—C9—H9A | 117.5 (9) |
O1—C3—C2 | 108.32 (6) | C7—C10—H10A | 112.9 (10) |
O1—C3—H3A | 110.4 (7) | C7—C10—H10B | 114.7 (11) |
C2—C3—H3A | 109.3 (7) | H10A—C10—H10B | 104.2 (14) |
O1—C3—H3B | 113.9 (7) | C7—C10—H10C | 110.4 (11) |
C2—C3—H3B | 107.8 (7) | H10A—C10—H10C | 107.1 (14) |
H3A—C3—H3B | 107.0 (10) | H10B—C10—H10C | 107.1 (15) |
O1—C4—C5 | 124.54 (6) | ||
C2—N1—N2—C1 | 0.94 (8) | N1—C2—C3—O1 | −11.09 (10) |
N1—N2—C1—N3 | −1.56 (8) | N3—C2—C3—O1 | 171.04 (6) |
N1—N2—C1—S1 | 178.86 (6) | C3—O1—C4—C5 | 6.66 (10) |
C2—N3—C1—N2 | 1.55 (8) | C3—O1—C4—C9 | −174.38 (6) |
N4—N3—C1—N2 | 174.57 (7) | O1—C4—C5—C6 | 176.82 (7) |
C2—N3—C1—S1 | −178.85 (5) | C9—C4—C5—C6 | −2.10 (11) |
N4—N3—C1—S1 | −5.83 (11) | C4—C5—C6—C7 | 0.49 (12) |
N2—N1—C2—N3 | 0.13 (8) | C5—C6—C7—C8 | 1.01 (11) |
N2—N1—C2—C3 | −177.90 (7) | C5—C6—C7—C10 | −178.28 (7) |
C1—N3—C2—N1 | −1.10 (8) | C6—C7—C8—C9 | −0.94 (12) |
N4—N3—C2—N1 | −174.56 (6) | C10—C7—C8—C9 | 178.36 (7) |
C1—N3—C2—C3 | 177.09 (6) | C7—C8—C9—C4 | −0.64 (12) |
N4—N3—C2—C3 | 3.62 (10) | O1—C4—C9—C8 | −176.84 (7) |
C4—O1—C3—C2 | 176.18 (6) | C5—C4—C9—C8 | 2.18 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N2···S1i | 0.930 (13) | 2.412 (13) | 3.3364 (7) | 172.5 (11) |
N4—H1N4···N1ii | 0.930 (17) | 2.428 (17) | 3.2100 (9) | 141.6 (12) |
N4—H2N4···S1iii | 0.894 (15) | 2.937 (16) | 3.5456 (7) | 126.8 (12) |
C10—H10C···Cg2iv | 0.968 (18) | 2.697 (19) | 3.6250 (9) | 160.8 (14) |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) x, y−1, z; (iii) −x+1, −y+1, −z; (iv) −x−1, −y+3, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C10H12N4OS |
Mr | 236.30 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 5.9977 (1), 6.4002 (1), 15.5506 (2) |
α, β, γ (°) | 89.352 (1), 83.157 (1), 65.562 (1) |
V (Å3) | 539.11 (1) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.28 |
Crystal size (mm) | 0.47 × 0.30 × 0.09 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.878, 0.975 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19910, 4712, 4228 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.807 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.032, 0.095, 1.05 |
No. of reflections | 4712 |
No. of parameters | 193 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.59, −0.33 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H1N2···S1i | 0.930 (13) | 2.412 (13) | 3.3364 (7) | 172.5 (11) |
N4—H1N4···N1ii | 0.930 (17) | 2.428 (17) | 3.2100 (9) | 141.6 (12) |
N4—H2N4···S1iii | 0.894 (15) | 2.937 (16) | 3.5456 (7) | 126.8 (12) |
C10—H10C···Cg2iv | 0.968 (18) | 2.697 (19) | 3.6250 (9) | 160.8 (14) |
Symmetry codes: (i) −x+2, −y+1, −z; (ii) x, y−1, z; (iii) −x+1, −y+1, −z; (iv) −x−1, −y+3, −z+1. |
Acknowledgements
HKF and JHG thank Universiti Sains Malaysia for the Research Universiti Golden Goose Grant (No. 1001/PFIZIK/811012). JHG thanks Universiti Sains Malaysia for the award of a Research Fellowship. AMI is thankful to the Head of the Department of Chemistry and the Director, NITK Surathkal, for providing research facilities.
References
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1,2,4-Triazole and its derivatives were reported to exhibit various pharmacological activities such as anti-microbial, analgesic, anti-inflammatory, anti-cancer and anti-oxidant properties (Amir et al., 2008; Kuş et al., 2008; Krzysztof et al., 2008; Padmavathi et al., 2008). Some of the present day drugs such as Ribavirin (anti-viral agent), Rizatriptan (anti-migraine agent), Alprazolam (anxiolytic agent), Fluconazole and Itraconazole (anti-fungal agents) are the best examples for potent molecules possessing the triazole nucleus. The amino and mercapto groups of thio-substituted 1,2,4-triazole serve as readily accessible nucleophilic centers for the preparation of N-bridged heterocycles. In view of their biological importance, we have synthesized the title compound (I) to study its crystal structure.
In (I), Fig. 1, the 1,2,4-triazole ring (C1/C2/N1-N3) is essentially planar, with a maximum deviation of 0.009 (1) Å for atom C1. The 1,2,4-triazole ring makes dihedral angle of 5.78 (4)° with the C4-C9 benzene ring. The bond lengths and angles in the molecule are comparable to those found in closely related structures (Fun et al., 2008, 2009).
In the crystal packing (Fig. 2), centrosymmetrically related molecules are linked into dimers by N2—H1N2···S1 interactions (Table 1). These dimers are linked into two-molecule-wide tapes by N4—H1N4···N1 (Table 1) and by short S1···S1 contacts of 3.2634 (3) Å; symmetry code: 2-x, -y, -z. In addition, these tapes are interconnected into sheets parallel to the ab plane by weak N4—H2N4···S1 interactions (Table 1). The crystal structure is further stabilized by weak C···H···π interactions (Table 1).