organic compounds
4-(4-Bromophenyl)-5-oxo-1,2,3,4,5,6,7,8-octahydroquinazoline-2-thione
aSchool of Chemistry and Environment, South China Normal University, Guangzhou 510006, People's Republic of China
*Correspondence e-mail: yulinzhu2002@yahoo.com.cn
The title compound, C14H13BrN2OS, was synthesized from the multicomponent reaction between thiourea, 4-bromobenzaldehyde and cyclohexane-1,3-dione. The crystal packing is stabilized by intermolecular N—H⋯O, N—H⋯S, C—H⋯O and C—H⋯S hydrogen bonds. Br⋯O interactions [3.183 (3) Å] are also observed in the crystal structure.
Related literature
For the pharmaceutical applications of 4-aryl-5-oxo-1,2,3,4,5,6,7,8-octahydroquinazoline-2-thiones, see: Kappe & Stadler (2004); Sarac et al. (1997, 1999); Yarima et al., (2003). For background information on halogen bonding, see: Damodharana et al. (2004); Sureshan et al. (2001); Yang et al. (2008).
Experimental
Crystal data
|
Refinement
|
Data collection: APEX2 (Bruker, 2004); cell SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809028761/zl2225sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809028761/zl2225Isup2.hkl
A mixture of thiourea (0.91 g, 12 mmol), 4-bromobenzaldehyde (1.84 g, 10 mmol), 1,3-cyclohexanedione (1.12 g, 10 mmol), and palladium(II) 2,4-pentanedionate (0.0020 mg) was refluxed in acetonitrile (12 ml) at 353 K for 4 h. After being cooled to room temperature, the reaction mixture was poured into water. The white precipitate was filtered off with a silica pad, washed twice with water, and the filtrate was then dried under vacuum to yield the product. Single crystals of the title compound were obtained by slow evaporation from ethanol at room temperature to yield colourless, block-shaped crystal.
The H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H = 0.93–0.97 Å and N—H = 0.86 Å, respectively, and Uiso = 1.2eq(parent atom).
Data collection: APEX2 (Bruker, 2004); cell
SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C14H13BrN2OS | Z = 2 |
Mr = 337.23 | F(000) = 340 |
Triclinic, P1 | Dx = 1.569 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.0395 (11) Å | Cell parameters from 1089 reflections |
b = 8.1859 (13) Å | θ = 2.7–23.6° |
c = 13.286 (2) Å | µ = 3.02 mm−1 |
α = 105.329 (2)° | T = 293 K |
β = 91.279 (2)° | Block, colourless |
γ = 103.854 (2)° | 0.25 × 0.25 × 0.20 mm |
V = 713.9 (2) Å3 |
Bruker APEXII area-detector diffractometer | 2744 independent reflections |
Radiation source: fine-focus sealed tube | 1880 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.021 |
ϕ and ω scans | θmax = 26.0°, θmin = 1.6° |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | h = −8→8 |
Tmin = 0.429, Tmax = 0.547 | k = −10→10 |
3953 measured reflections | l = −16→16 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | H-atom parameters constrained |
wR(F2) = 0.117 | w = 1/[σ2(Fo2) + (0.0382P)2 + 0.8552P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
2744 reflections | Δρmax = 0.42 e Å−3 |
174 parameters | Δρmin = −0.60 e Å−3 |
0 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0058 (17) |
C14H13BrN2OS | γ = 103.854 (2)° |
Mr = 337.23 | V = 713.9 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.0395 (11) Å | Mo Kα radiation |
b = 8.1859 (13) Å | µ = 3.02 mm−1 |
c = 13.286 (2) Å | T = 293 K |
α = 105.329 (2)° | 0.25 × 0.25 × 0.20 mm |
β = 91.279 (2)° |
Bruker APEXII area-detector diffractometer | 2744 independent reflections |
Absorption correction: multi-scan (APEX2; Bruker, 2004) | 1880 reflections with I > 2σ(I) |
Tmin = 0.429, Tmax = 0.547 | Rint = 0.021 |
3953 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | 0 restraints |
wR(F2) = 0.117 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.42 e Å−3 |
2744 reflections | Δρmin = −0.60 e Å−3 |
174 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 0.08077 (11) | 0.17375 (8) | −0.08352 (4) | 0.0927 (3) | |
S1 | 0.81565 (14) | 0.62120 (13) | 0.47136 (8) | 0.0395 (3) | |
N2 | 0.4706 (4) | 0.6637 (4) | 0.4168 (2) | 0.0322 (7) | |
H2 | 0.4223 | 0.6000 | 0.4568 | 0.039* | |
C8 | 0.6646 (5) | 0.7134 (5) | 0.4188 (3) | 0.0294 (8) | |
C7 | 0.3316 (5) | 0.7096 (4) | 0.3511 (3) | 0.0291 (8) | |
H7 | 0.2139 | 0.7176 | 0.3881 | 0.035* | |
C6 | 0.4253 (5) | 0.8861 (4) | 0.3369 (3) | 0.0282 (8) | |
C5 | 0.6241 (5) | 0.9449 (4) | 0.3455 (3) | 0.0287 (8) | |
C1 | 0.3007 (5) | 0.9915 (4) | 0.3130 (3) | 0.0303 (8) | |
C4 | 0.7274 (5) | 1.1109 (5) | 0.3220 (3) | 0.0352 (9) | |
H4A | 0.8475 | 1.0964 | 0.2906 | 0.042* | |
H4B | 0.7626 | 1.2047 | 0.3867 | 0.042* | |
C2 | 0.3965 (5) | 1.1566 (5) | 0.2867 (3) | 0.0396 (9) | |
H2A | 0.4084 | 1.2547 | 0.3484 | 0.047* | |
H2B | 0.3129 | 1.1722 | 0.2328 | 0.047* | |
C3 | 0.5987 (5) | 1.1589 (5) | 0.2486 (3) | 0.0402 (9) | |
H3A | 0.5851 | 1.0768 | 0.1796 | 0.048* | |
H3B | 0.6606 | 1.2749 | 0.2426 | 0.048* | |
N1 | 0.7383 (4) | 0.8485 (4) | 0.3772 (2) | 0.0350 (7) | |
H1 | 0.8622 | 0.8751 | 0.3703 | 0.042* | |
C9 | 0.2714 (5) | 0.5708 (4) | 0.2475 (3) | 0.0321 (8) | |
C12 | 0.1586 (8) | 0.3298 (5) | 0.0523 (3) | 0.0557 (12) | |
C14 | 0.0763 (6) | 0.4943 (6) | 0.2134 (4) | 0.0598 (13) | |
H14 | −0.0197 | 0.5240 | 0.2564 | 0.072* | |
C10 | 0.4095 (6) | 0.5213 (6) | 0.1814 (3) | 0.0482 (11) | |
H10 | 0.5424 | 0.5704 | 0.2027 | 0.058* | |
C11 | 0.3538 (7) | 0.4003 (6) | 0.0842 (3) | 0.0545 (12) | |
H11 | 0.4483 | 0.3674 | 0.0411 | 0.065* | |
C13 | 0.0205 (8) | 0.3738 (7) | 0.1163 (4) | 0.0802 (18) | |
H13 | −0.1120 | 0.3228 | 0.0947 | 0.096* | |
O1 | 0.1229 (4) | 0.9472 (3) | 0.3167 (2) | 0.0426 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.1179 (6) | 0.0830 (5) | 0.0453 (3) | −0.0032 (4) | 0.0010 (3) | −0.0098 (3) |
S1 | 0.0319 (6) | 0.0473 (6) | 0.0477 (6) | 0.0135 (4) | 0.0060 (4) | 0.0239 (5) |
N2 | 0.0243 (17) | 0.0368 (17) | 0.0377 (17) | 0.0038 (13) | 0.0046 (13) | 0.0172 (14) |
C8 | 0.027 (2) | 0.036 (2) | 0.0277 (18) | 0.0093 (16) | 0.0019 (14) | 0.0123 (15) |
C7 | 0.0207 (18) | 0.0322 (19) | 0.0358 (19) | 0.0052 (15) | 0.0042 (15) | 0.0127 (15) |
C6 | 0.0252 (19) | 0.0285 (18) | 0.0306 (18) | 0.0044 (15) | 0.0049 (14) | 0.0099 (14) |
C5 | 0.0245 (19) | 0.0284 (18) | 0.0348 (19) | 0.0065 (15) | 0.0069 (15) | 0.0114 (15) |
C1 | 0.026 (2) | 0.0326 (19) | 0.0319 (19) | 0.0073 (15) | 0.0046 (15) | 0.0079 (15) |
C4 | 0.026 (2) | 0.031 (2) | 0.050 (2) | 0.0026 (16) | 0.0055 (17) | 0.0165 (17) |
C2 | 0.030 (2) | 0.039 (2) | 0.053 (2) | 0.0100 (17) | 0.0058 (18) | 0.0179 (18) |
C3 | 0.034 (2) | 0.041 (2) | 0.051 (2) | 0.0052 (18) | 0.0070 (18) | 0.0251 (19) |
N1 | 0.0208 (16) | 0.0410 (18) | 0.0496 (19) | 0.0077 (13) | 0.0072 (14) | 0.0231 (15) |
C9 | 0.030 (2) | 0.0297 (19) | 0.038 (2) | 0.0042 (16) | 0.0037 (16) | 0.0161 (16) |
C12 | 0.073 (3) | 0.040 (2) | 0.041 (2) | −0.003 (2) | 0.007 (2) | 0.0044 (19) |
C14 | 0.034 (2) | 0.074 (3) | 0.050 (3) | −0.002 (2) | 0.006 (2) | −0.003 (2) |
C10 | 0.037 (2) | 0.054 (3) | 0.049 (3) | 0.010 (2) | 0.0076 (19) | 0.008 (2) |
C11 | 0.067 (3) | 0.051 (3) | 0.044 (3) | 0.014 (2) | 0.015 (2) | 0.010 (2) |
C13 | 0.045 (3) | 0.092 (4) | 0.064 (3) | −0.013 (3) | 0.000 (3) | −0.017 (3) |
O1 | 0.0251 (15) | 0.0507 (17) | 0.0573 (18) | 0.0117 (12) | 0.0069 (12) | 0.0221 (14) |
Br1—C12 | 1.895 (4) | C4—H4B | 0.9700 |
Br1—O1i | 3.183 (3) | C2—C3 | 1.519 (5) |
S1—C8 | 1.678 (4) | C2—H2A | 0.9700 |
N2—C8 | 1.326 (4) | C2—H2B | 0.9700 |
N2—C7 | 1.474 (4) | C3—H3A | 0.9700 |
N2—H2 | 0.8600 | C3—H3B | 0.9700 |
C8—N1 | 1.364 (4) | N1—H1 | 0.8600 |
C7—C6 | 1.500 (5) | C9—C14 | 1.376 (5) |
C7—C9 | 1.510 (5) | C9—C10 | 1.386 (5) |
C7—H7 | 0.9800 | C12—C13 | 1.356 (6) |
C6—C5 | 1.358 (5) | C12—C11 | 1.366 (7) |
C6—C1 | 1.453 (5) | C14—C13 | 1.383 (6) |
C5—N1 | 1.382 (4) | C14—H14 | 0.9300 |
C5—C4 | 1.495 (5) | C10—C11 | 1.384 (6) |
C1—O1 | 1.222 (4) | C10—H10 | 0.9300 |
C1—C2 | 1.492 (5) | C11—H11 | 0.9300 |
C4—C3 | 1.504 (5) | C13—H13 | 0.9300 |
C4—H4A | 0.9700 | ||
C12—Br1—O1i | 154.81 (16) | C1—C2—H2B | 108.9 |
C8—N2—C7 | 124.8 (3) | C3—C2—H2B | 108.9 |
C8—N2—H2 | 117.6 | H2A—C2—H2B | 107.7 |
C7—N2—H2 | 117.6 | C4—C3—C2 | 111.6 (3) |
N2—C8—N1 | 116.3 (3) | C4—C3—H3A | 109.3 |
N2—C8—S1 | 123.1 (3) | C2—C3—H3A | 109.3 |
N1—C8—S1 | 120.6 (3) | C4—C3—H3B | 109.3 |
N2—C7—C6 | 108.5 (3) | C2—C3—H3B | 109.3 |
N2—C7—C9 | 111.0 (3) | H3A—C3—H3B | 108.0 |
C6—C7—C9 | 112.0 (3) | C8—N1—C5 | 123.3 (3) |
N2—C7—H7 | 108.4 | C8—N1—H1 | 118.3 |
C6—C7—H7 | 108.4 | C5—N1—H1 | 118.3 |
C9—C7—H7 | 108.4 | C14—C9—C10 | 117.5 (4) |
C5—C6—C1 | 120.8 (3) | C14—C9—C7 | 121.0 (3) |
C5—C6—C7 | 120.1 (3) | C10—C9—C7 | 121.4 (3) |
C1—C6—C7 | 119.1 (3) | C13—C12—C11 | 120.5 (4) |
C6—C5—N1 | 119.4 (3) | C13—C12—Br1 | 119.9 (4) |
C6—C5—C4 | 122.9 (3) | C11—C12—Br1 | 119.6 (3) |
N1—C5—C4 | 117.7 (3) | C9—C14—C13 | 121.1 (4) |
O1—C1—C6 | 120.6 (3) | C9—C14—H14 | 119.4 |
O1—C1—C2 | 121.3 (3) | C13—C14—H14 | 119.4 |
C6—C1—C2 | 118.1 (3) | C11—C10—C9 | 121.4 (4) |
C5—C4—C3 | 110.8 (3) | C11—C10—H10 | 119.3 |
C5—C4—H4A | 109.5 | C9—C10—H10 | 119.3 |
C3—C4—H4A | 109.5 | C12—C11—C10 | 119.3 (4) |
C5—C4—H4B | 109.5 | C12—C11—H11 | 120.3 |
C3—C4—H4B | 109.5 | C10—C11—H11 | 120.3 |
H4A—C4—H4B | 108.1 | C12—C13—C14 | 120.2 (5) |
C1—C2—C3 | 113.4 (3) | C12—C13—H13 | 119.9 |
C1—C2—H2A | 108.9 | C14—C13—H13 | 119.9 |
C3—C2—H2A | 108.9 | ||
C7—N2—C8—N1 | 16.5 (5) | C1—C2—C3—C4 | −50.8 (5) |
C7—N2—C8—S1 | −164.9 (3) | N2—C8—N1—C5 | 7.6 (5) |
C8—N2—C7—C6 | −31.3 (4) | S1—C8—N1—C5 | −171.1 (3) |
C8—N2—C7—C9 | 92.1 (4) | C6—C5—N1—C8 | −12.3 (5) |
N2—C7—C6—C5 | 24.8 (4) | C4—C5—N1—C8 | 167.8 (3) |
C9—C7—C6—C5 | −98.0 (4) | N2—C7—C9—C14 | 126.7 (4) |
N2—C7—C6—C1 | −155.8 (3) | C6—C7—C9—C14 | −111.9 (4) |
C9—C7—C6—C1 | 81.3 (4) | N2—C7—C9—C10 | −56.1 (4) |
C1—C6—C5—N1 | 174.5 (3) | C6—C7—C9—C10 | 65.3 (4) |
C7—C6—C5—N1 | −6.1 (5) | O1i—Br1—C12—C13 | 63.0 (6) |
C1—C6—C5—C4 | −5.6 (5) | O1i—Br1—C12—C11 | −115.5 (5) |
C7—C6—C5—C4 | 173.8 (3) | C10—C9—C14—C13 | −0.7 (7) |
C5—C6—C1—O1 | −171.9 (3) | C7—C9—C14—C13 | 176.6 (5) |
C7—C6—C1—O1 | 8.8 (5) | C14—C9—C10—C11 | 0.5 (6) |
C5—C6—C1—C2 | 6.5 (5) | C7—C9—C10—C11 | −176.8 (4) |
C7—C6—C1—C2 | −172.9 (3) | C13—C12—C11—C10 | −1.9 (7) |
C6—C5—C4—C3 | −23.7 (5) | Br1—C12—C11—C10 | 176.6 (3) |
N1—C5—C4—C3 | 156.2 (3) | C9—C10—C11—C12 | 0.8 (7) |
O1—C1—C2—C3 | −159.6 (4) | C11—C12—C13—C14 | 1.8 (9) |
C6—C1—C2—C3 | 22.0 (5) | Br1—C12—C13—C14 | −176.8 (4) |
C5—C4—C3—C2 | 50.7 (4) | C9—C14—C13—C12 | −0.4 (9) |
Symmetry code: (i) −x, −y+1, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2A···S1ii | 0.97 | 2.98 | 3.781 (4) | 140 |
N2—H2···S1iii | 0.86 | 2.55 | 3.380 (3) | 161 |
N1—H1···O1iv | 0.86 | 2.00 | 2.832 (4) | 164 |
C4—H4A···O1iv | 0.97 | 2.59 | 3.361 (4) | 137 |
Symmetry codes: (ii) −x+1, −y+2, −z+1; (iii) −x+1, −y+1, −z+1; (iv) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C14H13BrN2OS |
Mr | 337.23 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.0395 (11), 8.1859 (13), 13.286 (2) |
α, β, γ (°) | 105.329 (2), 91.279 (2), 103.854 (2) |
V (Å3) | 713.9 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 3.02 |
Crystal size (mm) | 0.25 × 0.25 × 0.20 |
Data collection | |
Diffractometer | Bruker APEXII area-detector diffractometer |
Absorption correction | Multi-scan (APEX2; Bruker, 2004) |
Tmin, Tmax | 0.429, 0.547 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3953, 2744, 1880 |
Rint | 0.021 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.117, 1.04 |
No. of reflections | 2744 |
No. of parameters | 174 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.42, −0.60 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2A···S1i | 0.97 | 2.98 | 3.781 (4) | 140.3 |
N2—H2···S1ii | 0.86 | 2.55 | 3.380 (3) | 161.0 |
N1—H1···O1iii | 0.86 | 2.00 | 2.832 (4) | 163.7 |
C4—H4A···O1iii | 0.97 | 2.59 | 3.361 (4) | 136.7 |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, −y+1, −z+1; (iii) x+1, y, z. |
Acknowledgements
The authors thank South China Normal University for financial support (grant Nos. SCNU033038 and SCNU524002).
References
Bruker (2004). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Damodharana, D., Pattabhia, V., Beherab, M. & Kotha, S. (2004). J. Mol. Struct. 705, 101–106. Google Scholar
Kappe, C. O. & Stadler, A. (2004). Org. React. 63, 1–116. CAS Google Scholar
Sarac, S., Yarim, M., Ertan, M., Erol, K. & Aktan, Y. (1997). Boll. Chim. Farm. 136, 657–664. CAS PubMed Google Scholar
Sarac, S., Yarym, M. & Ertan, M. (1999). Anal. Lett. 32, 1245–1254. Web of Science CrossRef CAS Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Sureshan, K. M., Gonnade, R. G., Puranik, V. G., Shashidhar, M. S. & Bhadbhade, M. M. (2001). Chem. Commun. pp. 881–882. Web of Science CSD CrossRef Google Scholar
Yang, F. X., Li, X. D., Xu, G. R. & Qian, C. (2008). Z. Kristallogr. New Cryst. Struct. 223, 297–299. CAS Google Scholar
Yarima, M., Sarac, S., Kilic, F. S. & Erol, K. (2003). Farmaco, 58, 17–24. PubMed Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
4-Aryl-5-oxo-1,2,3,4,5,6,7,8-octahydroquinazoline-2-thiones have received much attention recently because of their pharmaceutical applications. (Kappe & Stadler, 2004; Sarac et al., 1997; Sarac et al., 1999). For example, the calcium antagonist activity of the compounds was tested in vitro on isolated rat ileum and lamb carotid artery. (Yarima et al., 2003). As part of our on going studies on the synthesis of quinazolinethiones, the title compound was isolated under Biginelli reaction conditions (Figure 1).
The reaction between thiourea, 4-bromobenzaldehyde, and 1,3-cyclohexanedione instead of an open-chain dicarbonyl compound in the presence of palladium(II) 2,4-pentanedionate as catalyst proceeded to give the title compound in excellent yield. A representation of the title compound is given in Figure 2. There are no unusual bond lengths and angles in the compound. The molecules in the structure are linked via N1—H1···O1 and paired N2—H2···S1 intermolecular hydrogen bonds. The bromine atom Br1 exhibits a Br···O halogen bond with oxygen atom O1 (Figure 3). (Damodharana et al., 2004; Sureshan et al., 2001; Yang et al., 2008). The Br1···O1 distance of this interaction is 3.182 Å, which is less than the sum of their van der Waals radii.