organic compounds
Duloxetine hydrochloride
aUNSW Analytical Centre, The University of New South Wales, Sydney, NSW 2052, Australia, and bArrow Laboratories Ltd, Croydon South, Victoria 3136, Australia
*Correspondence e-mail: m.bhadbhade@unsw.edu.au
The title compound [systematic name: N-methyl-3-(1-naphthyloxy)-3-(2-thienyl)propan-1-aminium chloride], C18H20NOS+·Cl−, was crystallized from 1,4-dioxane. Twofold rotational disorder exhibited by the thiophene ring in a 0.580 (5):0.420 (5) ratio represents two different conformations of the molecule that exist in the same crystal form. The contains strong N—H⋯Cl hydrogen bonds.
Related literature
For therapeutic properties of duloxetine hydrochloride, see Waitekus & Kirkpatrick (2004). For related structures, see: Brenna et al. (2007); Tao et al. (2008). The title compound is reported to have different polymorphs on the basis of X-ray powder diffraction data, see: Ini et al. (2006).
Experimental
Crystal data
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Data collection: APEX2 (Bruker, 2007); cell SAINT (Bruker, 2007); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: SHELXL97.
Supporting information
10.1107/S1600536809033996/bg2289sup1.cif
contains datablocks I, global. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809033996/bg2289Isup2.hkl
Microcrystalline powder of (1) was supplied by Arrow Laboratories Ltd.,Croydon, Australia. Recrystallization of this powder by slow evaporation was attempted in acetonitrile, 1,4-dioxane,chlorobenzene and 2-propanol. Suitable single crystals in the form of thin plates were grown from the first three solvents, crystals from chlorobenzene were very thin silky fibres unsuitable for single-crystal analysis. Crystals from the first three solvents yielded the same monoclinic P2(1) form having unit-cell parameters as given in Table 1. Amongst these, better quality crystals were obtained from 1,4-dioxane, which were used for further structural analysis.
The twofold disorder of the thiophene ring noted first in the E-map at the structure solution stage (two strong peaks and two long bonds instead of one), was confirmed subsequently in the full-matrix least-squares
The molecular geometry for this ring was refined with restrained bond and angles. H atoms were idealized at their expected positions and allowed to ride both in coordinates (C—H = 0.96–0.99, N–H = 0.92 Å), as well as in their isotropic displacement factors (Uĩso~(H) = 1.2/1.5× U~equiv~(host).Data collection: APEX2 (Bruker, 2007); cell
SAINT (Bruker, 2007); data reduction: sAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL-Plus (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).Fig. 1. Molecular view of 1. Displacement ellipsoids drawn at 50% level. | |
Fig. 2. Packing view of1 showing N—H···Cl interactions. |
C18H20NOS+·Cl− | F(000) = 352 |
Mr = 333.86 | Dx = 1.298 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 1635 reflections |
a = 9.7453 (10) Å | θ = 2.3–22.1° |
b = 6.9227 (7) Å | µ = 0.35 mm−1 |
c = 13.4247 (16) Å | T = 150 K |
β = 109.432 (4)° | Thin Plates, colourless |
V = 854.09 (16) Å3 | 0.38 × 0.08 × 0.03 mm |
Z = 2 |
Bruker Kappa APEXII CCD area-detector diffractometer | 2947 independent reflections |
Radiation source: fine-focus sealed tube | 2255 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.058 |
ϕ scans, and ω scans with κ offsets | θmax = 25.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | h = −10→11 |
Tmin = 0.879, Tmax = 0.990 | k = −8→8 |
6386 measured reflections | l = −15→15 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.044 | H-atom parameters constrained |
wR(F2) = 0.131 | w = 1/[σ2(Fo2) + (0.1P)2 + 0.0292P] where P = (Fo2 + 2Fc2)/3 |
S = 0.79 | (Δ/σ)max = 0.005 |
2947 reflections | Δρmax = 0.17 e Å−3 |
237 parameters | Δρmin = −0.21 e Å−3 |
110 restraints | Absolute structure: Flack (1983), 1309 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.05 (10) |
C18H20NOS+·Cl− | V = 854.09 (16) Å3 |
Mr = 333.86 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 9.7453 (10) Å | µ = 0.35 mm−1 |
b = 6.9227 (7) Å | T = 150 K |
c = 13.4247 (16) Å | 0.38 × 0.08 × 0.03 mm |
β = 109.432 (4)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 2947 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | 2255 reflections with I > 2σ(I) |
Tmin = 0.879, Tmax = 0.990 | Rint = 0.058 |
6386 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | H-atom parameters constrained |
wR(F2) = 0.131 | Δρmax = 0.17 e Å−3 |
S = 0.79 | Δρmin = −0.21 e Å−3 |
2947 reflections | Absolute structure: Flack (1983), 1309 Friedel pairs |
237 parameters | Absolute structure parameter: −0.05 (10) |
110 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.7076 (5) | 1.0388 (6) | 0.3732 (3) | 0.0414 (10) | |
H1 | 0.6473 | 1.0546 | 0.3018 | 0.050* | |
C2 | 0.8113 (5) | 1.1721 (7) | 0.4181 (3) | 0.0559 (13) | |
H2 | 0.8222 | 1.2804 | 0.3779 | 0.067* | |
C3 | 0.9031 (5) | 1.1525 (7) | 0.5234 (3) | 0.0498 (12) | |
H3 | 0.9769 | 1.2456 | 0.5538 | 0.060* | |
C4 | 0.8856 (4) | 0.9990 (6) | 0.5818 (3) | 0.0404 (10) | |
H4 | 0.9465 | 0.9877 | 0.6534 | 0.048* | |
C5 | 0.7784 (4) | 0.8557 (6) | 0.5376 (2) | 0.0333 (8) | |
C6 | 0.7619 (5) | 0.6944 (7) | 0.5957 (3) | 0.0488 (12) | |
H6 | 0.8217 | 0.6804 | 0.6674 | 0.059* | |
C7 | 0.6613 (5) | 0.5596 (7) | 0.5500 (3) | 0.0594 (14) | |
H7 | 0.6518 | 0.4508 | 0.5904 | 0.071* | |
C8 | 0.5696 (5) | 0.5748 (7) | 0.4444 (3) | 0.0453 (11) | |
H8 | 0.5007 | 0.4764 | 0.4134 | 0.054* | |
C9 | 0.5811 (4) | 0.7331 (5) | 0.3870 (3) | 0.0302 (9) | |
C10 | 0.6874 (4) | 0.8761 (5) | 0.4309 (3) | 0.0285 (8) | |
C11 | 0.3962 (4) | 0.6244 (5) | 0.2248 (3) | 0.0287 (8) | |
H11 | 0.3506 | 0.5543 | 0.2709 | 0.034* | |
C16 | 0.2800 (4) | 0.7340 (5) | 0.1395 (3) | 0.0334 (9) | |
H16A | 0.2233 | 0.6416 | 0.0851 | 0.040* | |
H16B | 0.3277 | 0.8263 | 0.1051 | 0.040* | |
C17 | 0.1769 (4) | 0.8439 (7) | 0.1826 (3) | 0.0395 (9) | |
H17A | 0.1988 | 0.8111 | 0.2581 | 0.047* | |
H17B | 0.1925 | 0.9844 | 0.1776 | 0.047* | |
C18 | −0.0810 (4) | 0.8802 (6) | 0.1698 (3) | 0.0449 (10) | |
H18A | −0.0634 | 0.8265 | 0.2405 | 0.067* | |
H18B | −0.1802 | 0.8483 | 0.1246 | 0.067* | |
H18C | −0.0694 | 1.0209 | 0.1746 | 0.067* | |
Cl1 | 0.02776 (10) | 0.35210 (15) | 0.11567 (7) | 0.0385 (3) | |
N1 | 0.0237 (3) | 0.7976 (4) | 0.1242 (2) | 0.0334 (7) | |
H1A | 0.0015 | 0.8416 | 0.0560 | 0.040* | |
H1B | 0.0131 | 0.6655 | 0.1214 | 0.040* | |
O1 | 0.4920 (3) | 0.7711 (3) | 0.28494 (18) | 0.0335 (6) | |
C12 | 0.4783 (4) | 0.4840 (6) | 0.1806 (3) | 0.0304 (9) | |
S1A | 0.4000 (4) | 0.2836 (6) | 0.1112 (4) | 0.0390 (8) | 0.580 (5) |
C13A | 0.5587 (15) | 0.220 (3) | 0.088 (2) | 0.043 (2) | 0.580 (5) |
H13A | 0.5703 | 0.1075 | 0.0508 | 0.051* | 0.58 |
C14A | 0.6634 (16) | 0.353 (2) | 0.1292 (18) | 0.045 (2) | 0.580 (5) |
H14A | 0.7575 | 0.3491 | 0.1227 | 0.054* | 0.58 |
C15A | 0.6158 (17) | 0.500 (3) | 0.184 (2) | 0.042 (4) | 0.580 (5) |
H15A | 0.6774 | 0.6027 | 0.2199 | 0.051* | 0.58 |
S1B | 0.6515 (6) | 0.5208 (10) | 0.1826 (7) | 0.0410 (14) | 0.420 (5) |
C13B | 0.656 (2) | 0.310 (3) | 0.119 (2) | 0.042 (3) | 0.420 (5) |
H13B | 0.7390 | 0.2624 | 0.1043 | 0.051* | 0.42 |
C14B | 0.526 (2) | 0.221 (4) | 0.091 (3) | 0.045 (3) | 0.420 (5) |
H14B | 0.5030 | 0.1062 | 0.0498 | 0.054* | 0.42 |
C15B | 0.427 (2) | 0.318 (3) | 0.131 (2) | 0.053 (5) | 0.420 (5) |
H15B | 0.3325 | 0.2691 | 0.1237 | 0.063* | 0.42 |
U11 | U22 | U33 | U12 | U13 | U23 | |
C12 | 0.030 (2) | 0.034 (2) | 0.0272 (18) | −0.0013 (18) | 0.0086 (16) | 0.0036 (16) |
S1A | 0.0360 (14) | 0.0354 (13) | 0.0453 (18) | 0.0021 (11) | 0.0130 (14) | −0.0108 (10) |
C13A | 0.046 (6) | 0.048 (5) | 0.038 (5) | 0.018 (5) | 0.019 (6) | −0.002 (4) |
C14A | 0.039 (4) | 0.060 (7) | 0.042 (5) | 0.009 (4) | 0.021 (4) | −0.001 (5) |
C15A | 0.044 (9) | 0.049 (6) | 0.042 (5) | −0.005 (6) | 0.025 (6) | −0.001 (4) |
S1B | 0.024 (2) | 0.056 (2) | 0.042 (2) | −0.0013 (18) | 0.0099 (19) | 0.0093 (17) |
C13B | 0.042 (5) | 0.051 (6) | 0.037 (7) | 0.009 (5) | 0.017 (5) | 0.015 (5) |
C14B | 0.045 (7) | 0.050 (6) | 0.036 (6) | 0.005 (6) | 0.010 (6) | 0.003 (5) |
C15B | 0.043 (7) | 0.062 (12) | 0.055 (11) | 0.005 (7) | 0.018 (8) | 0.003 (8) |
C1 | 0.047 (2) | 0.038 (2) | 0.0303 (19) | −0.007 (2) | 0.0003 (18) | 0.0082 (18) |
C2 | 0.062 (3) | 0.048 (3) | 0.043 (2) | −0.020 (3) | −0.002 (2) | 0.010 (2) |
C3 | 0.051 (3) | 0.045 (3) | 0.043 (2) | −0.017 (2) | 0.002 (2) | −0.003 (2) |
C4 | 0.040 (2) | 0.046 (2) | 0.0269 (19) | −0.002 (2) | −0.0007 (17) | −0.0027 (19) |
C5 | 0.034 (2) | 0.0372 (19) | 0.0269 (17) | −0.003 (2) | 0.0081 (15) | −0.001 (2) |
C6 | 0.046 (3) | 0.058 (3) | 0.032 (2) | −0.010 (2) | −0.0012 (19) | 0.019 (2) |
C7 | 0.060 (3) | 0.061 (3) | 0.042 (2) | −0.020 (3) | −0.004 (2) | 0.028 (2) |
C8 | 0.044 (2) | 0.043 (2) | 0.040 (2) | −0.014 (2) | 0.0024 (19) | 0.010 (2) |
C9 | 0.032 (2) | 0.032 (2) | 0.0261 (18) | 0.0051 (17) | 0.0090 (15) | 0.0010 (15) |
C10 | 0.0295 (19) | 0.031 (2) | 0.0250 (16) | 0.0001 (17) | 0.0092 (14) | −0.0023 (16) |
C11 | 0.026 (2) | 0.031 (2) | 0.0268 (18) | −0.0037 (15) | 0.0066 (16) | 0.0011 (14) |
C16 | 0.029 (2) | 0.035 (2) | 0.0308 (19) | 0.0003 (18) | 0.0029 (16) | −0.0060 (16) |
C17 | 0.033 (2) | 0.040 (2) | 0.0382 (19) | 0.002 (2) | 0.0021 (16) | −0.015 (2) |
C18 | 0.039 (2) | 0.040 (2) | 0.060 (2) | 0.003 (2) | 0.023 (2) | 0.000 (2) |
Cl1 | 0.0438 (6) | 0.0345 (5) | 0.0345 (5) | −0.0070 (5) | 0.0095 (4) | 0.0009 (4) |
N1 | 0.0348 (17) | 0.0295 (17) | 0.0335 (16) | −0.0006 (14) | 0.0080 (14) | 0.0003 (13) |
O1 | 0.0365 (14) | 0.0308 (13) | 0.0254 (12) | −0.0054 (12) | −0.0003 (11) | −0.0003 (10) |
C1—C2 | 1.353 (6) | C17—H17A | 0.9900 |
C1—C10 | 1.418 (5) | C17—H17B | 0.9900 |
C1—H1 | 0.9500 | C18—N1 | 1.469 (5) |
C2—C3 | 1.406 (5) | C18—H18A | 0.9800 |
C2—H2 | 0.9500 | C18—H18B | 0.9800 |
C3—C4 | 1.364 (6) | C18—H18C | 0.9800 |
C3—H3 | 0.9500 | N1—H1A | 0.9200 |
C4—C5 | 1.420 (6) | N1—H1B | 0.9200 |
C4—H4 | 0.9500 | C12—C15A | 1.332 (14) |
C5—C6 | 1.402 (6) | C12—C15B | 1.341 (16) |
C5—C10 | 1.418 (4) | C12—C11 | 1.501 (5) |
C6—C7 | 1.344 (6) | C12—S1B | 1.699 (7) |
C6—H6 | 0.9500 | C12—S1A | 1.703 (5) |
C7—C8 | 1.406 (5) | S1A—C13A | 1.734 (10) |
C7—H7 | 0.9500 | C13A—C14A | 1.351 (10) |
C8—C9 | 1.365 (5) | C13A—H13A | 0.9500 |
C8—H8 | 0.9500 | C14A—C15A | 1.420 (14) |
C9—O1 | 1.381 (4) | C14A—H14A | 0.9500 |
C9—C10 | 1.413 (5) | C15A—H15A | 0.9500 |
C11—O1 | 1.433 (4) | S1B—C13B | 1.699 (14) |
C11—C16 | 1.519 (5) | C13B—C14B | 1.351 (11) |
C11—H11 | 1.0000 | C13B—H13B | 0.9500 |
C16—C17 | 1.520 (5) | C14B—C15B | 1.421 (15) |
C16—H16A | 0.9900 | C14B—H14B | 0.9500 |
C16—H16B | 0.9900 | C15B—H15B | 0.9500 |
C17—N1 | 1.472 (4) | ||
C2—C1—C10 | 121.2 (3) | N1—C17—H17B | 109.3 |
C2—C1—H1 | 119.4 | C16—C17—H17B | 109.3 |
C10—C1—H1 | 119.4 | H17A—C17—H17B | 107.9 |
C1—C2—C3 | 120.9 (4) | N1—C18—H18A | 109.5 |
C1—C2—H2 | 119.5 | N1—C18—H18B | 109.5 |
C3—C2—H2 | 119.5 | H18A—C18—H18B | 109.5 |
C4—C3—C2 | 119.5 (4) | N1—C18—H18C | 109.5 |
C4—C3—H3 | 120.2 | H18A—C18—H18C | 109.5 |
C2—C3—H3 | 120.2 | H18B—C18—H18C | 109.5 |
C3—C4—C5 | 121.3 (3) | C18—N1—C17 | 114.6 (3) |
C3—C4—H4 | 119.3 | C18—N1—H1A | 108.6 |
C5—C4—H4 | 119.3 | C17—N1—H1A | 108.6 |
C6—C5—C10 | 119.5 (4) | C18—N1—H1B | 108.6 |
C6—C5—C4 | 121.9 (3) | C17—N1—H1B | 108.6 |
C10—C5—C4 | 118.6 (3) | H1A—N1—H1B | 107.6 |
C7—C6—C5 | 120.0 (4) | C9—O1—C11 | 120.0 (3) |
C7—C6—H6 | 120.0 | C15A—C12—C15B | 107.3 (10) |
C5—C6—H6 | 120.0 | C15A—C12—C11 | 126.5 (7) |
C6—C7—C8 | 122.0 (4) | C15B—C12—C11 | 126.2 (8) |
C6—C7—H7 | 119.0 | C15B—C12—S1B | 110.1 (8) |
C8—C7—H7 | 119.0 | C11—C12—S1B | 123.7 (3) |
C9—C8—C7 | 119.0 (4) | C15A—C12—S1A | 110.5 (7) |
C9—C8—H8 | 120.5 | C11—C12—S1A | 122.9 (3) |
C7—C8—H8 | 120.5 | S1B—C12—S1A | 113.1 (3) |
C8—C9—O1 | 124.8 (3) | C12—S1A—C13A | 92.4 (4) |
C8—C9—C10 | 120.9 (3) | C14A—C13A—S1A | 110.4 (8) |
O1—C9—C10 | 114.4 (3) | C14A—C13A—H13A | 124.8 |
C9—C10—C1 | 123.0 (3) | S1A—C13A—H13A | 124.8 |
C9—C10—C5 | 118.5 (3) | C13A—C14A—C15A | 111.8 (10) |
C1—C10—C5 | 118.5 (3) | C13A—C14A—H14A | 124.1 |
O1—C11—C12 | 110.4 (3) | C15A—C14A—H14A | 124.1 |
O1—C11—C16 | 104.7 (3) | C12—C15A—C14A | 114.8 (11) |
C12—C11—C16 | 112.8 (3) | C12—C15A—H15A | 122.6 |
O1—C11—H11 | 109.6 | C14A—C15A—H15A | 122.6 |
C12—C11—H11 | 109.6 | C13B—S1B—C12 | 93.3 (7) |
C16—C11—H11 | 109.6 | C14B—C13B—S1B | 110.6 (11) |
C11—C16—C17 | 112.6 (3) | C14B—C13B—H13B | 124.7 |
C11—C16—H16A | 109.1 | S1B—C13B—H13B | 124.7 |
C17—C16—H16A | 109.1 | C13B—C14B—C15B | 112.1 (12) |
C11—C16—H16B | 109.1 | C13B—C14B—H14B | 124.0 |
C17—C16—H16B | 109.1 | C15B—C14B—H14B | 124.0 |
H16A—C16—H16B | 107.8 | C12—C15B—C14B | 113.7 (12) |
N1—C17—C16 | 111.7 (3) | C12—C15B—H15B | 123.2 |
N1—C17—H17A | 109.3 | C14B—C15B—H15B | 123.2 |
C16—C17—H17A | 109.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl1i | 0.92 | 2.23 | 3.113 (3) | 161 |
N1—H1B···Cl1 | 0.92 | 2.18 | 3.087 (3) | 170 |
Symmetry code: (i) −x, y+1/2, −z. |
Experimental details
Crystal data | |
Chemical formula | C18H20NOS+·Cl− |
Mr | 333.86 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 150 |
a, b, c (Å) | 9.7453 (10), 6.9227 (7), 13.4247 (16) |
β (°) | 109.432 (4) |
V (Å3) | 854.09 (16) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.38 × 0.08 × 0.03 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2003) |
Tmin, Tmax | 0.879, 0.990 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6386, 2947, 2255 |
Rint | 0.058 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.131, 0.79 |
No. of reflections | 2947 |
No. of parameters | 237 |
No. of restraints | 110 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.17, −0.21 |
Absolute structure | Flack (1983), 1309 Friedel pairs |
Absolute structure parameter | −0.05 (10) |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), sAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL-Plus (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···Cl1i | 0.92 | 2.23 | 3.113 (3) | 161.4 |
N1—H1B···Cl1 | 0.92 | 2.18 | 3.087 (3) | 169.8 |
Symmetry code: (i) −x, y+1/2, −z. |
Acknowledgements
We are grateful to Professor Grainne Moran for her encouragement and interest in this work.
References
Brenna, E., Frigoli, S., Fronza, G., Fuganti, C. & Malpezzi, L. (2007). J. Pharm. Biomed. Anal. 43, 1573–1575. Web of Science CrossRef PubMed CAS Google Scholar
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Flack, H. D. (1983). Acta Cryst. A39, 876–881. CrossRef CAS Web of Science IUCr Journals Google Scholar
Ini, S., Shmueli, Y., Koltai, T. & Gold, A. (2006). Duloxetine. HCl Polymorphs WO/2006/081515, International Application No. PCT/US2006/003126. Publication Date: 03.08.2006. Google Scholar
Sheldrick, G. M. (2003). SADABS. University of Göttingen, Germany. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tao, X., Zhang, X.-Q., Yuan, L. & Wang, J.-T. (2008). Acta Cryst. E64, o553. Web of Science CSD CrossRef IUCr Journals Google Scholar
Waitekus, A. B. & Kirkpatrick, P. (2004). Nat. Rev. Drug Discov. 3, 907–908. Web of Science CrossRef PubMed CAS Google Scholar
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Duloxetine hydrochloride (1) is a new generation drug indicated for the management of major depressive disorders as well as for neuropathic pain (Waitekus, et al., 2004). The compound 1 is reported to have different polymorphs on the basis of X-ray powder diffraction data (Ini et al., 2006), but no single-crystal structure has as yet been presented. The only structures reported are that of a related racemic precursor (Tao, et al., 2008) and of a regioisomer (Brenna et al., 2007). Herein we report the structure of the drug itself (Fig. 1).
In the crystal structure, the thiophene ring is disordered over two positions obtained by 180 degree rotation about C11—C12 bond in a 0.580/0.420 (5) ratio. The same disorder with similar occupancies was also observed in the structure of an impurity (Brenna et al., 2007). These two orientations represent two different molecular conformations that exist in the same crystal structure; in one of them (minor occupancy) the S atom makes a short intramolecular contact with the oxygen atom (S···O = 2.957 Å). The thiophene and naphthyl units are almost perpendicular to each other (angle between their mean planes 87.9 (1) °).
The crystal packing (Fig. 2) shows that both the H-atoms attached to the N atom of the side chain make strong almost linear H-bonding contacts with the chloride ion.