organic compounds
4-[(2-Methyl-5-oxo-4,5-dihydro-1,3-oxazol-4-ylidene)methyl]phenyl acetate
aSchool of Environmental Science and Engineering, Sun Yat-Sen University, Guangzhou 510275, People's Republic of China, and bGuangdong Provincial Key Laboratory of Emergency Testing for Dangerous Chemicals, China National Analytical Center, Guangzhou 510070, People's Republic of China
*Correspondence e-mail: guopengran@gmail.com
In the title compound, C13H11NO4, an intramolecular C—H⋯N interaction helps to establish the conformation. In the crystal, two C—H⋯O contacts stack adjacent molecules into a one-dimensional double chain running in the a-axis direction.
Experimental
Crystal data
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Refinement
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Data collection: SMART (Bruker, 1998); cell SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809032243/kj2130sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809032243/kj2130Isup2.hkl
The title compund is synthesized according to previous reported literature (Baker, 1951). Single crystals suitable for X-ray diffraction were obtained by slow evaporation of a solution of the title compound in dichloromethane at room temperature.
For Methyls, H atoms were positioned theoretically with Uiso(H) = 1.5Ueq(C). The other H atoms in the title compound were placed geometrically and refined with fixed individual displacement parameters [Uiso(H) = 1.2Ueq(C)], using a riding model.
Data collection: SMART (Bruker, 1998); cell
SAINT-Plus (Bruker, 1998); data reduction: SAINT-Plus (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).C13H11NO4 | Z = 2 |
Mr = 245.23 | F(000) = 256 |
Triclinic, P1 | Dx = 1.383 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 5.5802 (15) Å | Cell parameters from 2544 reflections |
b = 7.446 (2) Å | θ = 3.0–25.4° |
c = 15.012 (4) Å | µ = 0.10 mm−1 |
α = 94.322 (4)° | T = 293 K |
β = 93.156 (4)° | Block, colourless |
γ = 108.136 (4)° | 0.14 × 0.13 × 0.08 mm |
V = 589.1 (3) Å3 |
Bruker SMART APEX CCD area-detector diffractometer | 2264 independent reflections |
Radiation source: fine-focus sealed tube | 1707 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
Detector resolution: 15 pixels mm-1 | θmax = 26.1°, θmin = 2.7° |
ϕ and ω scans | h = −6→3 |
Absorption correction: multi-scan (SAINT-Plus; Bruker, 2003) | k = −9→9 |
Tmin = 0.985, Tmax = 0.992 | l = −18→15 |
3324 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.061 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.164 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0685P)2 + 0.3541P] where P = (Fo2 + 2Fc2)/3 |
2264 reflections | (Δ/σ)max < 0.001 |
153 parameters | Δρmax = 0.15 e Å−3 |
0 restraints | Δρmin = −0.14 e Å−3 |
C13H11NO4 | γ = 108.136 (4)° |
Mr = 245.23 | V = 589.1 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 5.5802 (15) Å | Mo Kα radiation |
b = 7.446 (2) Å | µ = 0.10 mm−1 |
c = 15.012 (4) Å | T = 293 K |
α = 94.322 (4)° | 0.14 × 0.13 × 0.08 mm |
β = 93.156 (4)° |
Bruker SMART APEX CCD area-detector diffractometer | 2264 independent reflections |
Absorption correction: multi-scan (SAINT-Plus; Bruker, 2003) | 1707 reflections with I > 2σ(I) |
Tmin = 0.985, Tmax = 0.992 | Rint = 0.016 |
3324 measured reflections |
R[F2 > 2σ(F2)] = 0.061 | 0 restraints |
wR(F2) = 0.164 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.15 e Å−3 |
2264 reflections | Δρmin = −0.14 e Å−3 |
153 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
N1 | 0.4700 (4) | 0.9795 (3) | 0.17606 (14) | 0.0516 (6) | |
O1 | 1.3127 (3) | 0.7316 (3) | 0.44177 (12) | 0.0565 (5) | |
O2 | 0.2844 (4) | 0.6674 (3) | −0.02010 (13) | 0.0725 (6) | |
O3 | 0.2123 (4) | 0.9237 (3) | 0.04884 (12) | 0.0568 (5) | |
O4 | 1.0311 (4) | 0.7157 (3) | 0.54417 (13) | 0.0631 (6) | |
C1 | 1.1357 (5) | 0.7294 (4) | 0.37105 (17) | 0.0491 (6) | |
C2 | 1.1061 (5) | 0.5959 (4) | 0.29939 (17) | 0.0540 (7) | |
H2 | 1.1950 | 0.5091 | 0.3002 | 0.065* | |
C3 | 0.9434 (5) | 0.5922 (4) | 0.22626 (17) | 0.0518 (7) | |
H3 | 0.9229 | 0.5019 | 0.1778 | 0.062* | |
C4 | 0.8449 (5) | 0.8561 (4) | 0.29798 (17) | 0.0529 (7) | |
H4 | 0.7574 | 0.9439 | 0.2980 | 0.064* | |
C5 | 1.0078 (5) | 0.8603 (4) | 0.37083 (17) | 0.0552 (7) | |
H5 | 1.0312 | 0.9507 | 0.4195 | 0.066* | |
C6 | 0.8087 (5) | 0.7219 (3) | 0.22381 (16) | 0.0460 (6) | |
C7 | 0.6402 (5) | 0.7112 (4) | 0.14512 (17) | 0.0485 (6) | |
H7 | 0.6312 | 0.6140 | 0.1010 | 0.058* | |
C8 | 0.4950 (5) | 0.8196 (3) | 0.12586 (16) | 0.0456 (6) | |
C9 | 0.3284 (5) | 0.7834 (4) | 0.04328 (18) | 0.0517 (6) | |
C10 | 0.3096 (6) | 1.0311 (4) | 0.1294 (2) | 0.0614 (5) | |
C11 | 0.2127 (6) | 1.1906 (4) | 0.1497 (2) | 0.0614 (5) | |
H11A | 0.2977 | 1.2619 | 0.2046 | 0.092* | |
H11B | 0.0343 | 1.1427 | 0.1558 | 0.092* | |
H11C | 0.2430 | 1.2715 | 0.1019 | 0.092* | |
C12 | 1.2360 (5) | 0.7171 (4) | 0.52634 (17) | 0.0483 (6) | |
C13 | 1.4387 (6) | 0.6997 (4) | 0.5901 (2) | 0.0614 (5) | |
H13A | 1.4521 | 0.7817 | 0.6439 | 0.092* | |
H13B | 1.5969 | 0.7353 | 0.5632 | 0.092* | |
H13C | 1.3984 | 0.5707 | 0.6044 | 0.092* |
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0563 (13) | 0.0520 (13) | 0.0512 (12) | 0.0260 (10) | −0.0003 (10) | −0.0015 (10) |
O1 | 0.0468 (10) | 0.0774 (13) | 0.0507 (11) | 0.0283 (9) | 0.0027 (8) | 0.0039 (9) |
O2 | 0.0901 (16) | 0.0779 (14) | 0.0548 (12) | 0.0428 (12) | −0.0140 (11) | −0.0167 (11) |
O3 | 0.0637 (12) | 0.0609 (12) | 0.0513 (11) | 0.0312 (10) | −0.0071 (9) | −0.0008 (9) |
O4 | 0.0549 (12) | 0.0869 (15) | 0.0590 (12) | 0.0379 (11) | 0.0086 (9) | 0.0100 (10) |
C1 | 0.0461 (14) | 0.0585 (15) | 0.0465 (14) | 0.0220 (12) | 0.0049 (11) | 0.0049 (12) |
C2 | 0.0600 (16) | 0.0603 (16) | 0.0524 (15) | 0.0355 (14) | 0.0043 (13) | 0.0020 (13) |
C3 | 0.0634 (17) | 0.0516 (15) | 0.0470 (14) | 0.0295 (13) | 0.0039 (12) | −0.0020 (11) |
C4 | 0.0654 (17) | 0.0523 (15) | 0.0507 (15) | 0.0339 (13) | 0.0019 (13) | 0.0007 (12) |
C5 | 0.0665 (17) | 0.0570 (16) | 0.0468 (14) | 0.0299 (14) | −0.0005 (13) | −0.0061 (12) |
C6 | 0.0512 (14) | 0.0463 (13) | 0.0450 (13) | 0.0219 (11) | 0.0058 (11) | 0.0030 (11) |
C7 | 0.0563 (15) | 0.0482 (14) | 0.0442 (13) | 0.0220 (12) | 0.0046 (11) | 0.0001 (11) |
C8 | 0.0502 (14) | 0.0469 (13) | 0.0429 (13) | 0.0206 (11) | 0.0040 (11) | 0.0026 (10) |
C9 | 0.0581 (16) | 0.0522 (15) | 0.0493 (14) | 0.0249 (13) | 0.0031 (12) | 0.0025 (12) |
C10 | 0.0603 (10) | 0.0662 (11) | 0.0616 (10) | 0.0281 (8) | −0.0028 (8) | 0.0013 (8) |
C11 | 0.0603 (10) | 0.0662 (11) | 0.0616 (10) | 0.0281 (8) | −0.0028 (8) | 0.0013 (8) |
C12 | 0.0472 (15) | 0.0487 (14) | 0.0487 (14) | 0.0173 (12) | −0.0005 (11) | −0.0029 (11) |
C13 | 0.0603 (10) | 0.0662 (11) | 0.0616 (10) | 0.0281 (8) | −0.0028 (8) | 0.0013 (8) |
N1—C10 | 1.275 (3) | C4—C6 | 1.400 (3) |
N1—C8 | 1.409 (3) | C4—H4 | 0.9300 |
O1—C12 | 1.363 (3) | C5—H5 | 0.9300 |
O1—C1 | 1.405 (3) | C6—C7 | 1.450 (3) |
O2—C9 | 1.196 (3) | C7—C8 | 1.345 (4) |
O3—C10 | 1.381 (3) | C7—H7 | 0.9300 |
O3—C9 | 1.390 (3) | C8—C9 | 1.463 (4) |
O4—C12 | 1.185 (3) | C10—C11 | 1.469 (4) |
C1—C2 | 1.374 (4) | C11—H11A | 0.9600 |
C1—C5 | 1.376 (4) | C11—H11B | 0.9600 |
C2—C3 | 1.379 (4) | C11—H11C | 0.9600 |
C2—H2 | 0.9300 | C12—C13 | 1.484 (4) |
C3—C6 | 1.398 (3) | C13—H13A | 0.9600 |
C3—H3 | 0.9300 | C13—H13B | 0.9600 |
C4—C5 | 1.375 (4) | C13—H13C | 0.9600 |
C10—N1—C8 | 105.4 (2) | C7—C8—N1 | 129.4 (2) |
C12—O1—C1 | 118.8 (2) | C7—C8—C9 | 122.6 (2) |
C10—O3—C9 | 105.4 (2) | N1—C8—C9 | 108.0 (2) |
C2—C1—C5 | 121.3 (2) | O2—C9—O3 | 121.5 (2) |
C2—C1—O1 | 116.6 (2) | O2—C9—C8 | 133.5 (2) |
C5—C1—O1 | 122.0 (2) | O3—C9—C8 | 105.0 (2) |
C1—C2—C3 | 119.3 (2) | N1—C10—O3 | 116.3 (2) |
C1—C2—H2 | 120.3 | N1—C10—C11 | 128.7 (3) |
C3—C2—H2 | 120.3 | O3—C10—C11 | 115.1 (2) |
C2—C3—C6 | 121.1 (2) | C10—C11—H11A | 109.5 |
C2—C3—H3 | 119.5 | C10—C11—H11B | 109.5 |
C6—C3—H3 | 119.5 | H11A—C11—H11B | 109.5 |
C5—C4—C6 | 121.1 (2) | C10—C11—H11C | 109.5 |
C5—C4—H4 | 119.4 | H11A—C11—H11C | 109.5 |
C6—C4—H4 | 119.4 | H11B—C11—H11C | 109.5 |
C4—C5—C1 | 119.4 (2) | O4—C12—O1 | 123.0 (2) |
C4—C5—H5 | 120.3 | O4—C12—C13 | 125.9 (3) |
C1—C5—H5 | 120.3 | O1—C12—C13 | 111.1 (2) |
C3—C6—C4 | 117.8 (2) | C12—C13—H13A | 109.5 |
C3—C6—C7 | 118.6 (2) | C12—C13—H13B | 109.5 |
C4—C6—C7 | 123.6 (2) | H13A—C13—H13B | 109.5 |
C8—C7—C6 | 130.1 (2) | C12—C13—H13C | 109.5 |
C8—C7—H7 | 114.9 | H13A—C13—H13C | 109.5 |
C6—C7—H7 | 114.9 | H13B—C13—H13C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···N1 | 0.93 | 2.45 | 3.098 (4) | 127 |
C7—H7···O2i | 0.93 | 2.53 | 3.417 (4) | 160 |
C13—H13B···O4ii | 0.96 | 2.50 | 3.382 (4) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C13H11NO4 |
Mr | 245.23 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 5.5802 (15), 7.446 (2), 15.012 (4) |
α, β, γ (°) | 94.322 (4), 93.156 (4), 108.136 (4) |
V (Å3) | 589.1 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.14 × 0.13 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector diffractometer |
Absorption correction | Multi-scan (SAINT-Plus; Bruker, 2003) |
Tmin, Tmax | 0.985, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3324, 2264, 1707 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.618 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.061, 0.164, 1.04 |
No. of reflections | 2264 |
No. of parameters | 153 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.15, −0.14 |
Computer programs: SMART (Bruker, 1998), SAINT-Plus (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···N1 | 0.93 | 2.45 | 3.098 (4) | 127 |
C7—H7···O2i | 0.93 | 2.53 | 3.417 (4) | 160 |
C13—H13B···O4ii | 0.96 | 2.50 | 3.382 (4) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z; (ii) x+1, y, z. |
Acknowledgements
This work was supported by Guangdong Provincial Key Laboratory of Emergency Testing for Dangerous Chemicals, China National Analytical Center (Guangzhou), People's Republic of China.
References
Baker, L. E. (1951). J. Biol. Chem. 193, 809–819. PubMed CAS Web of Science Google Scholar
Bruker (1998). SMART and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Bruker (2003). SAINT-Plus. Bruker AXS Inc., Madison, Wisconsion, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
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The title compound is an important medical intermediate (Baker, 1951). Here we report the molecular and crystal structure of the title compound (Fig. 1). In the cystal structure,the five- and six-membered rings are nearly coplanar. The interplanar angle between the two rings is 1.392 (3)°. The crystal packing (Fig. 2) is stabilized by two types of intermolecular C—H···O interactions and one kind of intramolecular C—H···N interaction. Details are listed in Table 1. These interactions join the molecules into a double chain parallel to the a axis.