metal-organic compounds
Aquatris(1H-benzimidazole-κN3)(dichloroacetato-κO)copper(II) dichloroacetate dihydrate
aMicroscale Science Institute, Department of Chemistry and Chemical Engineering, Weifang University, Weifang 261061, People's Republic of China, and bMicroscale Science Institute, Weifang University, Weifang 261061, People's Republic of China
*Correspondence e-mail: ffjian2008@163.com
The title compound, [Cu(C2HCl2O2)(C7H6N2)3(H2O)]C2HCl2O2·2H2O, was prepared by reaction of copper(II) 2,2-dichloroacetic acid and benzimidazole in ethanol solution. The compound shows a regular trigonal–bipyramidal stereochemistry. The CuII centre possesses a five-coordinated environment, coordinated by three N atoms from the three benzimidazole ligands and two O atoms, one from the dichloroacetate ligand and the other from the coordinated water molecule. The molecular structure and packing are stabilized by O—H⋯O and N—H⋯O hydrogen bonds. The Cl atoms are disordered over two sites, with relative occupancies 0.67 (3) and 0.33 (3).
Related literature
For background to penta-coordinated copper complexes, see: Tyagi et al. (1984). For a related compound, see: Barszcz et al. (2004).
Experimental
Crystal data
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Data collection
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Refinement
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Data collection: SMART (Bruker, 1997); cell SAINT (Bruker, 1997); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL.
Supporting information
10.1107/S1600536809038392/br2115sup1.cif
contains datablocks global, I. DOI:Structure factors: contains datablock I. DOI: 10.1107/S1600536809038392/br2115Isup2.hkl
Solid copper(II) 2,2-dicholoracetate, C4H2Cl4Cu1O4 0.32 g (1 mmol) and benzimidazole 0.35 g (3 mmol) were added in 50 ml anhydrous alcohol under stirring. The mixture was refluxed for 5 h. The blue solution was filtered and the filtrate was left to stand undisturbed. Upon slow evaporation at room temperature, a blue crystalline solid appeared three days later and was separated by filtration. Determined by X-ray crystallography.
H atoms were positioned geometrically and allowed to ride on their parent atoms, with C—H distances of 0.93–0.96 Å, and with Uiso(H) = 1.2Ueq of the parent atoms. The Cl1 atom and Cl2 atom are disordered over two sites, with relative occupancies 0.672 (34) and 0.328 (34).
Data collection: SMART (Bruker, 1997); cell
SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).Fig. 1. The molecular structure and atom-labeling scheme for (I), with displacement ellipsoids drawn at the 30% probability level. |
[Cu(C2HCl2O2)(C7H6N2)3(H2O)]C2HCl2O2·2H2O | F(000) = 1484 |
Mr = 727.86 | Dx = 1.535 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2360 reflections |
a = 9.6027 (16) Å | θ = 2.3–28.2° |
b = 8.6957 (15) Å | µ = 1.09 mm−1 |
c = 37.799 (6) Å | T = 293 K |
β = 93.945 (3)° | Block, blue |
V = 3148.8 (9) Å3 | 0.23 × 0.20 × 0.18 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 5174 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.036 |
Graphite monochromator | θmax = 28.2°, θmin = 2.2° |
ϕ and ω scans | h = −12→10 |
19614 measured reflections | k = −11→11 |
7576 independent reflections | l = −34→50 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0529P)2 + 1.2061P] where P = (Fo2 + 2Fc2)/3 |
7576 reflections | (Δ/σ)max = 0.001 |
488 parameters | Δρmax = 1.00 e Å−3 |
10 restraints | Δρmin = −0.59 e Å−3 |
[Cu(C2HCl2O2)(C7H6N2)3(H2O)]C2HCl2O2·2H2O | V = 3148.8 (9) Å3 |
Mr = 727.86 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.6027 (16) Å | µ = 1.09 mm−1 |
b = 8.6957 (15) Å | T = 293 K |
c = 37.799 (6) Å | 0.23 × 0.20 × 0.18 mm |
β = 93.945 (3)° |
Bruker SMART CCD area-detector diffractometer | 5174 reflections with I > 2σ(I) |
19614 measured reflections | Rint = 0.036 |
7576 independent reflections |
R[F2 > 2σ(F2)] = 0.047 | 10 restraints |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 1.00 e Å−3 |
7576 reflections | Δρmin = −0.59 e Å−3 |
488 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.55853 (3) | 0.58911 (4) | 0.621230 (8) | 0.03147 (11) | |
Cl1A | 0.8686 (6) | 0.1449 (6) | 0.63210 (11) | 0.0763 (11) | 0.67 (3) |
Cl2A | 0.9346 (9) | 0.2214 (14) | 0.56111 (10) | 0.087 (2) | 0.67 (3) |
Cl1B | 0.8843 (14) | 0.1269 (15) | 0.6237 (7) | 0.107 (4) | 0.33 (3) |
Cl2B | 0.9719 (14) | 0.298 (3) | 0.5610 (2) | 0.096 (3) | 0.33 (3) |
O1 | 0.7499 (2) | 0.5103 (2) | 0.61458 (6) | 0.0418 (5) | |
O2 | 0.6514 (2) | 0.3248 (2) | 0.58070 (6) | 0.0461 (5) | |
O1W | 0.6458 (2) | 0.7384 (3) | 0.66834 (6) | 0.0456 (5) | |
H1B | 0.619 (3) | 0.741 (4) | 0.6881 (6) | 0.055* | |
H1C | 0.729 (2) | 0.749 (4) | 0.6710 (9) | 0.055* | |
N1 | 0.3528 (2) | 0.6367 (3) | 0.62332 (6) | 0.0353 (5) | |
N2 | 0.1489 (3) | 0.6637 (3) | 0.64701 (7) | 0.0439 (6) | |
H2 | 0.096 (3) | 0.671 (4) | 0.6629 (7) | 0.044 (9)* | |
N3 | 0.5337 (2) | 0.4060 (3) | 0.65180 (6) | 0.0352 (5) | |
N4 | 0.5672 (3) | 0.2358 (3) | 0.69497 (7) | 0.0430 (6) | |
H4 | 0.603 (3) | 0.193 (4) | 0.7139 (7) | 0.066 (12)* | |
N5 | 0.5864 (2) | 0.7632 (3) | 0.58822 (6) | 0.0319 (5) | |
N6 | 0.6065 (3) | 1.0057 (3) | 0.57153 (7) | 0.0407 (6) | |
H6 | 0.619 (4) | 1.100 (2) | 0.5752 (9) | 0.058 (11)* | |
C1 | 0.2615 (3) | 0.6892 (4) | 0.55998 (9) | 0.0503 (8) | |
H1A | 0.353 (4) | 0.666 (4) | 0.5496 (9) | 0.060* | |
C2 | 0.1406 (4) | 0.7264 (6) | 0.53993 (11) | 0.0736 (13) | |
H2A | 0.145 (4) | 0.736 (5) | 0.5136 (11) | 0.088* | |
C3 | 0.0141 (4) | 0.7475 (6) | 0.55558 (13) | 0.0830 (14) | |
H3A | −0.060 (3) | 0.783 (5) | 0.5426 (10) | 0.100* | |
C4 | 0.0025 (4) | 0.7312 (5) | 0.59114 (12) | 0.0609 (10) | |
H4A | −0.085 (4) | 0.737 (4) | 0.6013 (10) | 0.073* | |
C5 | 0.1233 (3) | 0.6914 (3) | 0.61125 (9) | 0.0409 (7) | |
C6 | 0.2516 (3) | 0.6730 (3) | 0.59624 (8) | 0.0364 (6) | |
C7 | 0.2861 (3) | 0.6327 (4) | 0.65275 (9) | 0.0430 (7) | |
H6A | 0.330 (3) | 0.608 (4) | 0.6749 (9) | 0.052* | |
C8 | 0.3385 (3) | 0.2603 (4) | 0.61785 (8) | 0.0408 (7) | |
H8A | 0.323 (3) | 0.327 (4) | 0.6009 (9) | 0.049* | |
C9 | 0.2590 (3) | 0.1300 (4) | 0.61945 (10) | 0.0486 (8) | |
H9A | 0.188 (4) | 0.110 (4) | 0.6006 (9) | 0.058* | |
C10 | 0.2782 (4) | 0.0263 (4) | 0.64766 (10) | 0.0515 (9) | |
H10A | 0.219 (4) | −0.060 (4) | 0.6483 (9) | 0.062* | |
C11 | 0.3790 (4) | 0.0449 (4) | 0.67445 (9) | 0.0459 (8) | |
H11A | 0.397 (3) | −0.027 (4) | 0.6935 (9) | 0.055* | |
C12 | 0.4602 (3) | 0.1785 (3) | 0.67299 (7) | 0.0347 (6) | |
C13 | 0.4394 (3) | 0.2852 (3) | 0.64544 (7) | 0.0330 (6) | |
C14 | 0.6067 (3) | 0.3692 (4) | 0.68129 (8) | 0.0413 (7) | |
H14A | 0.685 (3) | 0.428 (4) | 0.6910 (8) | 0.050* | |
C15 | 0.6404 (4) | 0.6474 (4) | 0.52901 (8) | 0.0463 (8) | |
H15A | 0.634 (3) | 0.546 (4) | 0.5351 (9) | 0.056* | |
C16 | 0.6743 (4) | 0.6869 (5) | 0.49547 (9) | 0.0633 (10) | |
H16A | 0.690 (4) | 0.609 (5) | 0.4791 (11) | 0.076* | |
C17 | 0.6901 (4) | 0.8402 (5) | 0.48565 (9) | 0.0620 (10) | |
H17A | 0.717 (4) | 0.858 (4) | 0.4628 (10) | 0.074* | |
C18 | 0.6700 (4) | 0.9586 (5) | 0.50846 (9) | 0.0509 (9) | |
H18A | 0.683 (4) | 1.060 (4) | 0.5054 (9) | 0.061* | |
C19 | 0.6356 (3) | 0.9184 (3) | 0.54269 (7) | 0.0361 (6) | |
C20 | 0.6221 (3) | 0.7658 (3) | 0.55289 (7) | 0.0310 (6) | |
C21 | 0.5786 (3) | 0.9084 (4) | 0.59758 (8) | 0.0376 (6) | |
H21A | 0.559 (3) | 0.941 (4) | 0.6204 (8) | 0.045* | |
C22 | 0.7507 (3) | 0.3848 (3) | 0.59806 (8) | 0.0397 (7) | |
C23 | 0.8912 (4) | 0.3007 (4) | 0.60214 (9) | 0.0517 (8) | |
H23 | 0.963 (4) | 0.356 (4) | 0.6143 (9) | 0.062* | |
Cl3 | 1.08746 (13) | 0.35382 (14) | 0.69629 (3) | 0.0815 (3) | |
Cl4 | 1.26119 (11) | 0.22307 (19) | 0.75391 (3) | 0.0951 (4) | |
O3 | 0.9457 (3) | 0.2538 (3) | 0.76400 (7) | 0.0684 (8) | |
O4 | 0.9295 (3) | 0.0293 (3) | 0.73571 (7) | 0.0609 (7) | |
C24 | 0.9847 (3) | 0.1547 (4) | 0.74289 (8) | 0.0446 (7) | |
C25 | 1.1158 (3) | 0.1918 (4) | 0.72357 (9) | 0.0481 (8) | |
H25 | 1.136 (4) | 0.111 (4) | 0.7106 (9) | 0.058* | |
O2W | 0.9420 (3) | 0.7505 (3) | 0.69464 (6) | 0.0511 (6) | |
H2B | 0.924 (4) | 0.685 (3) | 0.7097 (8) | 0.061* | |
H2C | 0.946 (4) | 0.830 (3) | 0.7056 (9) | 0.061* | |
O3W | 0.8433 (2) | 0.5492 (3) | 0.74611 (6) | 0.0478 (5) | |
H3B | 0.878 (4) | 0.467 (3) | 0.7505 (10) | 0.057* | |
H3C | 0.762 (2) | 0.530 (4) | 0.7494 (10) | 0.057* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.03492 (19) | 0.02875 (19) | 0.03115 (18) | −0.00259 (14) | 0.00518 (13) | 0.00311 (14) |
Cl1A | 0.085 (2) | 0.070 (2) | 0.071 (3) | 0.0185 (14) | −0.0159 (12) | 0.0213 (11) |
Cl2A | 0.073 (2) | 0.126 (4) | 0.0618 (12) | 0.044 (2) | 0.0070 (12) | −0.0200 (18) |
Cl1B | 0.057 (4) | 0.039 (3) | 0.217 (10) | −0.003 (3) | −0.046 (5) | 0.023 (5) |
Cl2B | 0.078 (4) | 0.136 (9) | 0.075 (3) | 0.024 (5) | 0.022 (3) | −0.024 (4) |
O1 | 0.0390 (11) | 0.0322 (11) | 0.0552 (13) | −0.0025 (9) | 0.0103 (9) | −0.0024 (10) |
O2 | 0.0464 (12) | 0.0340 (12) | 0.0569 (13) | 0.0046 (10) | −0.0030 (11) | −0.0003 (10) |
O1W | 0.0436 (12) | 0.0581 (14) | 0.0352 (11) | −0.0098 (11) | 0.0024 (10) | −0.0060 (11) |
N1 | 0.0392 (13) | 0.0310 (13) | 0.0363 (13) | −0.0004 (10) | 0.0078 (10) | 0.0054 (10) |
N2 | 0.0443 (15) | 0.0372 (15) | 0.0529 (17) | −0.0025 (12) | 0.0223 (13) | 0.0032 (13) |
N3 | 0.0381 (13) | 0.0335 (13) | 0.0338 (12) | −0.0063 (11) | −0.0001 (10) | 0.0037 (10) |
N4 | 0.0485 (15) | 0.0453 (16) | 0.0346 (14) | 0.0015 (12) | −0.0015 (12) | 0.0098 (12) |
N5 | 0.0365 (12) | 0.0289 (13) | 0.0308 (12) | −0.0034 (10) | 0.0065 (10) | 0.0005 (10) |
N6 | 0.0528 (16) | 0.0266 (14) | 0.0429 (14) | −0.0026 (12) | 0.0058 (12) | 0.0014 (12) |
C1 | 0.0384 (17) | 0.069 (2) | 0.0433 (18) | −0.0134 (17) | 0.0011 (14) | 0.0042 (17) |
C2 | 0.048 (2) | 0.117 (4) | 0.054 (2) | −0.020 (2) | −0.0085 (18) | 0.020 (2) |
C3 | 0.043 (2) | 0.117 (4) | 0.086 (3) | −0.012 (2) | −0.017 (2) | 0.027 (3) |
C4 | 0.0322 (18) | 0.064 (2) | 0.087 (3) | −0.0074 (16) | 0.0059 (18) | 0.013 (2) |
C5 | 0.0346 (16) | 0.0293 (16) | 0.060 (2) | −0.0075 (13) | 0.0093 (14) | 0.0026 (14) |
C6 | 0.0340 (15) | 0.0343 (16) | 0.0415 (16) | −0.0073 (12) | 0.0054 (12) | 0.0032 (13) |
C7 | 0.0467 (18) | 0.0417 (18) | 0.0420 (17) | −0.0009 (14) | 0.0138 (14) | 0.0073 (14) |
C8 | 0.0416 (17) | 0.0400 (18) | 0.0405 (17) | −0.0003 (14) | 0.0002 (14) | −0.0006 (14) |
C9 | 0.0414 (18) | 0.048 (2) | 0.057 (2) | −0.0067 (15) | 0.0028 (15) | −0.0142 (16) |
C10 | 0.052 (2) | 0.0336 (18) | 0.072 (2) | −0.0095 (15) | 0.0215 (18) | −0.0107 (17) |
C11 | 0.058 (2) | 0.0296 (16) | 0.053 (2) | 0.0030 (15) | 0.0230 (17) | 0.0041 (14) |
C12 | 0.0381 (15) | 0.0333 (16) | 0.0334 (15) | 0.0015 (12) | 0.0087 (12) | 0.0015 (12) |
C13 | 0.0348 (15) | 0.0303 (15) | 0.0345 (15) | −0.0005 (12) | 0.0050 (12) | 0.0019 (12) |
C14 | 0.0432 (17) | 0.0438 (19) | 0.0360 (16) | −0.0045 (14) | −0.0034 (13) | 0.0069 (13) |
C15 | 0.059 (2) | 0.0405 (18) | 0.0392 (17) | 0.0015 (16) | 0.0032 (15) | −0.0056 (15) |
C16 | 0.084 (3) | 0.071 (3) | 0.0350 (18) | 0.008 (2) | 0.0089 (18) | −0.0110 (18) |
C17 | 0.076 (3) | 0.082 (3) | 0.0288 (17) | 0.002 (2) | 0.0124 (17) | 0.0102 (18) |
C18 | 0.057 (2) | 0.053 (2) | 0.0421 (18) | −0.0073 (17) | 0.0058 (16) | 0.0177 (17) |
C19 | 0.0340 (14) | 0.0395 (17) | 0.0348 (15) | −0.0016 (13) | 0.0032 (12) | 0.0042 (13) |
C20 | 0.0293 (13) | 0.0349 (16) | 0.0290 (13) | 0.0001 (11) | 0.0026 (11) | 0.0011 (11) |
C21 | 0.0438 (16) | 0.0368 (16) | 0.0331 (15) | 0.0012 (13) | 0.0092 (13) | 0.0016 (13) |
C22 | 0.0435 (17) | 0.0339 (18) | 0.0427 (17) | 0.0025 (13) | 0.0090 (14) | 0.0057 (13) |
C23 | 0.0475 (19) | 0.052 (2) | 0.055 (2) | 0.0138 (16) | −0.0009 (16) | −0.0027 (17) |
Cl3 | 0.1008 (8) | 0.0806 (7) | 0.0658 (6) | −0.0078 (6) | 0.0254 (6) | 0.0240 (6) |
Cl4 | 0.0566 (6) | 0.1605 (13) | 0.0683 (7) | 0.0004 (7) | 0.0034 (5) | −0.0003 (7) |
O3 | 0.0913 (19) | 0.0503 (15) | 0.0697 (16) | −0.0018 (13) | 0.0500 (15) | −0.0059 (13) |
O4 | 0.0587 (15) | 0.0485 (15) | 0.0781 (17) | −0.0107 (12) | 0.0229 (13) | −0.0105 (13) |
C24 | 0.0498 (18) | 0.0414 (19) | 0.0445 (18) | 0.0068 (15) | 0.0166 (15) | 0.0040 (15) |
C25 | 0.0519 (19) | 0.049 (2) | 0.0458 (18) | −0.0027 (16) | 0.0185 (15) | −0.0044 (15) |
O2W | 0.0505 (13) | 0.0561 (16) | 0.0482 (14) | −0.0009 (12) | 0.0135 (11) | −0.0052 (11) |
O3W | 0.0425 (13) | 0.0501 (14) | 0.0508 (13) | 0.0010 (11) | 0.0027 (11) | −0.0071 (11) |
Cu1—N3 | 1.991 (2) | C5—C6 | 1.400 (4) |
Cu1—N5 | 1.992 (2) | C7—H6A | 0.94 (3) |
Cu1—O1 | 1.993 (2) | C8—C9 | 1.370 (4) |
Cu1—N1 | 2.025 (2) | C8—C13 | 1.391 (4) |
Cu1—O1W | 2.314 (2) | C8—H8A | 0.87 (3) |
Cl1A—C23 | 1.789 (6) | C9—C10 | 1.399 (5) |
Cl2A—C23 | 1.773 (5) | C9—H9A | 0.97 (4) |
Cl1B—C23 | 1.720 (11) | C10—C11 | 1.361 (5) |
Cl2B—C23 | 1.784 (9) | C10—H10A | 0.94 (4) |
O1—C22 | 1.257 (3) | C11—C12 | 1.403 (4) |
O2—C22 | 1.235 (4) | C11—H11A | 0.96 (3) |
O1W—H1B | 0.808 (18) | C12—C13 | 1.399 (4) |
O1W—H1C | 0.803 (18) | C14—H14A | 0.96 (3) |
N1—C7 | 1.322 (4) | C15—C16 | 1.374 (5) |
N1—C6 | 1.398 (4) | C15—C20 | 1.388 (4) |
N2—C7 | 1.347 (4) | C15—H15A | 0.91 (3) |
N2—C5 | 1.378 (4) | C16—C17 | 1.395 (6) |
N2—H2 | 0.820 (17) | C16—H16A | 0.94 (4) |
N3—C14 | 1.315 (4) | C17—C18 | 1.365 (6) |
N3—C13 | 1.397 (4) | C17—H17A | 0.93 (4) |
N4—C14 | 1.336 (4) | C18—C19 | 1.401 (4) |
N4—C12 | 1.370 (4) | C18—H18A | 0.90 (4) |
N4—H4 | 0.856 (18) | C19—C20 | 1.391 (4) |
N5—C21 | 1.315 (4) | C21—H21A | 0.94 (3) |
N5—C20 | 1.401 (3) | C22—C23 | 1.533 (4) |
N6—C21 | 1.339 (4) | C23—H23 | 0.93 (4) |
N6—C19 | 1.373 (4) | Cl3—C25 | 1.756 (4) |
N6—H6 | 0.835 (18) | Cl4—C25 | 1.766 (4) |
C1—C2 | 1.380 (5) | O3—C24 | 1.249 (4) |
C1—C6 | 1.388 (4) | O4—C24 | 1.235 (4) |
C1—H1A | 1.01 (3) | C24—C25 | 1.532 (4) |
C2—C3 | 1.400 (6) | C25—H25 | 0.88 (3) |
C2—H2A | 1.00 (4) | O2W—H2B | 0.835 (18) |
C3—C4 | 1.364 (6) | O2W—H2C | 0.809 (18) |
C3—H3A | 0.891 (19) | O3W—H3B | 0.802 (18) |
C4—C5 | 1.387 (5) | O3W—H3C | 0.814 (18) |
C4—H4A | 0.95 (4) | ||
N3—Cu1—N5 | 176.38 (9) | C10—C11—C12 | 116.0 (3) |
N3—Cu1—O1 | 86.92 (9) | C10—C11—H11A | 124 (2) |
N5—Cu1—O1 | 91.01 (9) | C12—C11—H11A | 120 (2) |
N3—Cu1—N1 | 89.13 (9) | N4—C12—C13 | 105.8 (2) |
N5—Cu1—N1 | 92.43 (9) | N4—C12—C11 | 132.3 (3) |
O1—Cu1—N1 | 170.17 (9) | C13—C12—C11 | 121.8 (3) |
N3—Cu1—O1W | 93.07 (9) | C8—C13—N3 | 131.0 (3) |
N5—Cu1—O1W | 89.91 (9) | C8—C13—C12 | 120.8 (3) |
O1—Cu1—O1W | 90.11 (9) | N3—C13—C12 | 108.2 (2) |
N1—Cu1—O1W | 99.09 (9) | N3—C14—N4 | 113.0 (3) |
C22—O1—Cu1 | 113.46 (19) | N3—C14—H14A | 123 (2) |
Cu1—O1W—H1B | 127 (3) | N4—C14—H14A | 123.4 (19) |
Cu1—O1W—H1C | 118 (3) | C16—C15—C20 | 117.6 (3) |
H1B—O1W—H1C | 105 (4) | C16—C15—H15A | 120 (2) |
C7—N1—C6 | 105.6 (2) | C20—C15—H15A | 122 (2) |
C7—N1—Cu1 | 123.9 (2) | C15—C16—C17 | 121.4 (4) |
C6—N1—Cu1 | 130.43 (18) | C15—C16—H16A | 119 (2) |
C7—N2—C5 | 107.4 (3) | C17—C16—H16A | 119 (2) |
C7—N2—H2 | 123 (2) | C18—C17—C16 | 122.0 (3) |
C5—N2—H2 | 129 (2) | C18—C17—H17A | 121 (3) |
C14—N3—C13 | 105.3 (2) | C16—C17—H17A | 117 (2) |
C14—N3—Cu1 | 127.5 (2) | C17—C18—C19 | 116.6 (3) |
C13—N3—Cu1 | 127.11 (19) | C17—C18—H18A | 129 (2) |
C14—N4—C12 | 107.6 (3) | C19—C18—H18A | 114 (2) |
C14—N4—H4 | 127 (3) | N6—C19—C20 | 106.2 (2) |
C12—N4—H4 | 126 (3) | N6—C19—C18 | 132.0 (3) |
C21—N5—C20 | 105.3 (2) | C20—C19—C18 | 121.8 (3) |
C21—N5—Cu1 | 123.29 (19) | C15—C20—C19 | 120.6 (3) |
C20—N5—Cu1 | 131.40 (18) | C15—C20—N5 | 131.1 (3) |
C21—N6—C19 | 107.3 (3) | C19—C20—N5 | 108.2 (2) |
C21—N6—H6 | 122 (2) | N5—C21—N6 | 113.0 (3) |
C19—N6—H6 | 129 (2) | N5—C21—H21A | 124 (2) |
C2—C1—C6 | 117.0 (3) | N6—C21—H21A | 123 (2) |
C2—C1—H1A | 123.8 (19) | O2—C22—O1 | 126.9 (3) |
C6—C1—H1A | 119.0 (19) | O2—C22—C23 | 119.6 (3) |
C1—C2—C3 | 121.4 (4) | O1—C22—C23 | 113.5 (3) |
C1—C2—H2A | 118 (2) | C22—C23—Cl1B | 113.9 (7) |
C3—C2—H2A | 120 (2) | C22—C23—Cl2A | 110.8 (3) |
C4—C3—C2 | 122.3 (4) | Cl1B—C23—Cl2A | 95.2 (7) |
C4—C3—H3A | 117 (3) | C22—C23—Cl2B | 110.6 (4) |
C2—C3—H3A | 120 (3) | Cl1B—C23—Cl2B | 115.6 (5) |
C3—C4—C5 | 116.4 (3) | Cl2A—C23—Cl2B | 24.5 (5) |
C3—C4—H4A | 122 (2) | C22—C23—Cl1A | 106.3 (3) |
C5—C4—H4A | 121 (2) | Cl1B—C23—Cl1A | 12.7 (10) |
N2—C5—C4 | 131.9 (3) | Cl2A—C23—Cl1A | 107.8 (4) |
N2—C5—C6 | 105.9 (3) | Cl2B—C23—Cl1A | 128.3 (8) |
C4—C5—C6 | 122.2 (3) | C22—C23—H23 | 115 (2) |
C1—C6—N1 | 130.9 (3) | Cl1B—C23—H23 | 106 (2) |
C1—C6—C5 | 120.7 (3) | Cl2A—C23—H23 | 115 (2) |
N1—C6—C5 | 108.4 (2) | Cl2B—C23—H23 | 95 (2) |
N1—C7—N2 | 112.6 (3) | Cl1A—C23—H23 | 101 (2) |
N1—C7—H6A | 123 (2) | O4—C24—O3 | 127.3 (3) |
N2—C7—H6A | 124 (2) | O4—C24—C25 | 115.8 (3) |
C9—C8—C13 | 117.2 (3) | O3—C24—C25 | 116.9 (3) |
C9—C8—H8A | 121 (2) | C24—C25—Cl3 | 110.5 (2) |
C13—C8—H8A | 122 (2) | C24—C25—Cl4 | 111.2 (2) |
C8—C9—C10 | 121.5 (3) | Cl3—C25—Cl4 | 109.9 (2) |
C8—C9—H9A | 119 (2) | C24—C25—H25 | 108 (2) |
C10—C9—H9A | 120 (2) | Cl3—C25—H25 | 110 (2) |
C11—C10—C9 | 122.7 (3) | Cl4—C25—H25 | 107 (2) |
C11—C10—H10A | 118 (2) | H2B—O2W—H2C | 104 (4) |
C9—C10—H10A | 119 (2) | H3B—O3W—H3C | 100 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1B···O3i | 0.81 (2) | 1.96 (2) | 2.763 (3) | 178 (4) |
O1W—H1C···O2W | 0.80 (2) | 2.18 (2) | 2.949 (3) | 162 (3) |
N2—H2···O2Wii | 0.82 (2) | 2.08 (2) | 2.873 (3) | 162 (3) |
N4—H4···O3Wiii | 0.86 (2) | 2.00 (2) | 2.842 (3) | 166 (4) |
N6—H6···O2iv | 0.84 (2) | 1.99 (2) | 2.826 (3) | 176 (3) |
O2W—H2B···O3W | 0.84 (2) | 2.01 (2) | 2.832 (3) | 168 (4) |
O2W—H2C···O4iv | 0.81 (2) | 2.08 (2) | 2.886 (3) | 172 (4) |
O3W—H3B···O3 | 0.83 (2) | 2.01 (2) | 2.813 (4) | 164 (3) |
O3W—H3C···O4i | 0.84 (2) | 1.93 (2) | 2.757 (3) | 170 (4) |
C15—H15A···O2 | 0.91 (3) | 2.58 (3) | 3.416 (4) | 152 (3) |
Symmetry codes: (i) −x+3/2, y+1/2, −z+3/2; (ii) x−1, y, z; (iii) −x+3/2, y−1/2, −z+3/2; (iv) x, y+1, z. |
Experimental details
Crystal data | |
Chemical formula | [Cu(C2HCl2O2)(C7H6N2)3(H2O)]C2HCl2O2·2H2O |
Mr | 727.86 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 9.6027 (16), 8.6957 (15), 37.799 (6) |
β (°) | 93.945 (3) |
V (Å3) | 3148.8 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.09 |
Crystal size (mm) | 0.23 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19614, 7576, 5174 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.666 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.047, 0.122, 1.04 |
No. of reflections | 7576 |
No. of parameters | 488 |
No. of restraints | 10 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.00, −0.59 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1B···O3i | 0.808 (18) | 1.955 (18) | 2.763 (3) | 178 (4) |
O1W—H1C···O2W | 0.802 (18) | 2.18 (2) | 2.949 (3) | 162 (3) |
N2—H2···O2Wii | 0.820 (17) | 2.08 (2) | 2.873 (3) | 162 (3) |
N4—H4···O3Wiii | 0.856 (18) | 2.00 (2) | 2.842 (3) | 166 (4) |
N6—H6···O2iv | 0.836 (18) | 1.991 (19) | 2.826 (3) | 176 (3) |
O2W—H2B···O3W | 0.835 (18) | 2.01 (2) | 2.832 (3) | 168 (4) |
O2W—H2C···O4iv | 0.810 (18) | 2.080 (19) | 2.886 (3) | 172 (4) |
O3W—H3B···O3 | 0.831 (17) | 2.01 (2) | 2.813 (4) | 164 (3) |
O3W—H3C···O4i | 0.841 (17) | 1.925 (18) | 2.757 (3) | 170 (4) |
C15—H15A···O2 | 0.91 (3) | 2.58 (3) | 3.416 (4) | 152 (3) |
Symmetry codes: (i) −x+3/2, y+1/2, −z+3/2; (ii) x−1, y, z; (iii) −x+3/2, y−1/2, −z+3/2; (iv) x, y+1, z. |
Acknowledgements
The authors thank the Science Foundation of Weifang University (grant No. 2009Z24). Thanks are also extended to Hai-Xing Liu for help with preparing the CIF.
References
Barszcz, B., Glowiak, T., Jezierska, J. & Tomkiewicz, A. (2004). Polyhedron, 23, 1308–1316. Web of Science CSD CrossRef Google Scholar
Bruker (1997). SMART, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Google Scholar
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. Web of Science CrossRef CAS IUCr Journals Google Scholar
Tyagi, S., Hathaway, B., Kremer, S., Stratemeier, H. & Reinen, D. (1984). J. Chem. Soc. Dalton Trans. pp. 2087–2091. CSD CrossRef Web of Science Google Scholar
This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
The penta-coordinated copper complexes have been attracting great interest for their diverse stereo and physicochemical properties (Tyagi et al., 1984). Therefore the coordination chemistry of Cu(II) with ligands is of great interest. In this paper, we reported the synthesis and crystal structure of the title compound.
In the crystal structure of the title compound (Fig. 1), all the bond length and angle are in the normal range. (Barszcz et al., 2004). The title compound consists of discrete monovalent complex cations, dichloroacetic acid anion and solvent water molecules. The dichloroacetic ions appear to be loosely held in lattice holes by Coulombic forces and by weak hydrogen bonds to the solvent water molecules. The interionic hydrogen bonds play an important role in the crystal packing and the stability of the complex. The Cl1 and Cl2 atoms are disordered.